Metagenome / Metatranscriptome Family F044065

Basic Information
Family ID	F044065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	79 residues
Representative Sequence	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH
Number of Associated Samples	127
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.71 %
% of genes near scaffold ends (potentially truncated)	35.48 %
% of genes from short scaffolds (< 2000 bps)	92.26 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Unclassified (67.097 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.129 % of family members)
Environment Ontology (ENVO)	Unclassified (24.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.871 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.36% β-sheet: 0.00% Coil/Unstructured: 43.64%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.74.1.0: automated matches	d3mi9b1	3mi9	0.69448
f.49.1.1: Proton glutamate symport protein	d7ahka1	7ahk	0.68811
a.74.1.1: Cyclin	d2i53a1	2i53	0.682
a.69.2.1: Ypt/Rab-GAP domain of gyp1p	d2g77a1	2g77	0.67394
a.204.1.1: Type II deoxyuridine triphosphatase	d1w2ya_	1w2y	0.67075

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF00072	Response_reg	13.55
PF13545	HTH_Crp_2	7.74
PF09361	Phasin_2	1.94
PF09903	DUF2130	1.29
PF07690	MFS_1	0.65
PF03544	TonB_C	0.65
PF00857	Isochorismatase	0.65
PF02566	OsmC	0.65
PF13462	Thioredoxin_4	0.65
PF09723	Zn-ribbon_8	0.65
PF06742	DUF1214	0.65
PF02543	Carbam_trans_N	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.65
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.65
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.65
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.65
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.65
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.65

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
All Organisms	root	All Organisms	32.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
cellular organisms	root	All Organisms → cellular organisms	32.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	17.42 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.58 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	17.42 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.65 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	17.42 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	0.65 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221224731	Not Available	586	Open in IMG/M
3300000955\|JGI1027J12803_108262884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1147	Open in IMG/M
3300001977\|JGI24746J21847_1039042	Not Available	659	Open in IMG/M
3300001978\|JGI24747J21853_1017387	Not Available	766	Open in IMG/M
3300002070\|JGI24750J21931_1004580	Not Available	1680	Open in IMG/M
3300002239\|JGI24034J26672_10075106	Not Available	610	Open in IMG/M
3300004156\|Ga0062589_102217810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	562	Open in IMG/M
3300004156\|Ga0062589_102801025	Not Available	509	Open in IMG/M
3300004798\|Ga0058859_10005262	Not Available	647	Open in IMG/M
3300004803\|Ga0058862_10660105	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005290\|Ga0065712_10731800	Not Available	535	Open in IMG/M
3300005332\|Ga0066388_100897049	Not Available	1465	Open in IMG/M
3300005332\|Ga0066388_105625229	Not Available	634	Open in IMG/M
3300005332\|Ga0066388_106540503	Not Available	587	Open in IMG/M
3300005332\|Ga0066388_107731479	Not Available	538	Open in IMG/M
3300005347\|Ga0070668_100825833	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005406\|Ga0070703_10404043	Not Available	595	Open in IMG/M
3300005437\|Ga0070710_11434091	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005439\|Ga0070711_100354188	Not Available	1181	Open in IMG/M
3300005439\|Ga0070711_100511676	Not Available	991	Open in IMG/M
3300005445\|Ga0070708_102135572	Not Available	518	Open in IMG/M
3300005458\|Ga0070681_10343152	Not Available	1403	Open in IMG/M
3300005518\|Ga0070699_100342898	Not Available	1345	Open in IMG/M
3300005526\|Ga0073909_10114233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1085	Open in IMG/M
3300005543\|Ga0070672_100853064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	803	Open in IMG/M
3300005563\|Ga0068855_101986862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	588	Open in IMG/M
3300005617\|Ga0068859_100907460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	965	Open in IMG/M
3300005713\|Ga0066905_100079729	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300005713\|Ga0066905_101157181	Not Available	689	Open in IMG/M
3300005713\|Ga0066905_102253277	Not Available	509	Open in IMG/M
3300005764\|Ga0066903_100160907	All Organisms → cellular organisms → Bacteria	3255	Open in IMG/M
3300005764\|Ga0066903_100352835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2379	Open in IMG/M
3300005764\|Ga0066903_108551050	Not Available	521	Open in IMG/M
3300005844\|Ga0068862_100776697	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300006058\|Ga0075432_10290281	Not Available	676	Open in IMG/M
3300006175\|Ga0070712_101174114	Not Available	667	Open in IMG/M
3300006237\|Ga0097621_100514237	Not Available	1086	Open in IMG/M
3300006845\|Ga0075421_100718086	Not Available	1159	Open in IMG/M
3300006846\|Ga0075430_101738362	Not Available	512	Open in IMG/M
3300006847\|Ga0075431_100108020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2871	Open in IMG/M
3300006852\|Ga0075433_11120906	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006871\|Ga0075434_100318614	Not Available	1575	Open in IMG/M
3300006880\|Ga0075429_100486075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1082	Open in IMG/M
3300006903\|Ga0075426_10333674	Not Available	1112	Open in IMG/M
3300006914\|Ga0075436_100271800	Not Available	1210	Open in IMG/M
3300009011\|Ga0105251_10510023	Not Available	563	Open in IMG/M
3300009100\|Ga0075418_10499135	Not Available	1306	Open in IMG/M
3300009101\|Ga0105247_10235251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1246	Open in IMG/M
3300009101\|Ga0105247_11233225	Not Available	597	Open in IMG/M
3300009148\|Ga0105243_12234631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	584	Open in IMG/M
3300009156\|Ga0111538_10899100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1121	Open in IMG/M
3300009156\|Ga0111538_12254446	Not Available	684	Open in IMG/M
3300009162\|Ga0075423_12321192	Not Available	584	Open in IMG/M
3300009176\|Ga0105242_11938240	Not Available	630	Open in IMG/M
3300009553\|Ga0105249_10512736	Not Available	1246	Open in IMG/M
3300009792\|Ga0126374_10067217	Not Available	1901	Open in IMG/M
3300010043\|Ga0126380_10307646	Not Available	1131	Open in IMG/M
3300010046\|Ga0126384_10749490	Not Available	870	Open in IMG/M
3300010047\|Ga0126382_10195252	Not Available	1434	Open in IMG/M
3300010048\|Ga0126373_12104287	Not Available	626	Open in IMG/M
3300010154\|Ga0127503_10615802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	677	Open in IMG/M
3300010358\|Ga0126370_10418404	Not Available	1107	Open in IMG/M
3300010359\|Ga0126376_12775238	Not Available	539	Open in IMG/M
3300010360\|Ga0126372_10026220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3559	Open in IMG/M
3300010361\|Ga0126378_10073140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3291	Open in IMG/M
3300010361\|Ga0126378_10150440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2369	Open in IMG/M
3300010362\|Ga0126377_11594777	Not Available	727	Open in IMG/M
3300010362\|Ga0126377_12461502	Not Available	596	Open in IMG/M
3300010366\|Ga0126379_10672199	Not Available	1127	Open in IMG/M
3300010398\|Ga0126383_13478696	Not Available	514	Open in IMG/M
3300011120\|Ga0150983_10557544	Not Available	1414	Open in IMG/M
3300012212\|Ga0150985_111533536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	625	Open in IMG/M
3300012477\|Ga0157336_1011512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	689	Open in IMG/M
3300012891\|Ga0157305_10283216	Not Available	512	Open in IMG/M
3300012893\|Ga0157284_10036117	Not Available	1058	Open in IMG/M
3300012899\|Ga0157299_10136435	Not Available	678	Open in IMG/M
3300012907\|Ga0157283_10060836	Not Available	900	Open in IMG/M
3300012910\|Ga0157308_10311468	Not Available	580	Open in IMG/M
3300012912\|Ga0157306_10037174	Not Available	1152	Open in IMG/M
3300012914\|Ga0157297_10133158	Not Available	790	Open in IMG/M
3300012929\|Ga0137404_11324301	Not Available	664	Open in IMG/M
3300012929\|Ga0137404_12194270	Not Available	516	Open in IMG/M
3300012957\|Ga0164303_10049446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1855	Open in IMG/M
3300012957\|Ga0164303_10076293	Not Available	1583	Open in IMG/M
3300012958\|Ga0164299_10114347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1429	Open in IMG/M
3300012960\|Ga0164301_11387438	Not Available	574	Open in IMG/M
3300012960\|Ga0164301_11646973	Not Available	534	Open in IMG/M
3300012961\|Ga0164302_10432859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300012961\|Ga0164302_10515256	Not Available	847	Open in IMG/M
3300012971\|Ga0126369_12432993	Not Available	609	Open in IMG/M
3300012985\|Ga0164308_10174539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1613	Open in IMG/M
3300012985\|Ga0164308_10717461	Not Available	864	Open in IMG/M
3300012986\|Ga0164304_10187011	Not Available	1340	Open in IMG/M
3300012987\|Ga0164307_10659709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	814	Open in IMG/M
3300012989\|Ga0164305_11444410	Not Available	608	Open in IMG/M
3300013102\|Ga0157371_10020751	Not Available	4832	Open in IMG/M
3300013104\|Ga0157370_10376611	Not Available	1308	Open in IMG/M
3300013306\|Ga0163162_11925763	Not Available	677	Open in IMG/M
3300015077\|Ga0173483_10803147	Not Available	543	Open in IMG/M
3300015373\|Ga0132257_101602011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300015373\|Ga0132257_103043636	Not Available	611	Open in IMG/M
3300016294\|Ga0182041_11146450	Not Available	707	Open in IMG/M
3300016319\|Ga0182033_10473221	Not Available	1072	Open in IMG/M
3300017792\|Ga0163161_10311977	Not Available	1241	Open in IMG/M
3300017792\|Ga0163161_10672732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	860	Open in IMG/M
3300019356\|Ga0173481_10037312	Not Available	1600	Open in IMG/M
3300019361\|Ga0173482_10082716	Not Available	1127	Open in IMG/M
3300019362\|Ga0173479_10074543	Not Available	1188	Open in IMG/M
3300020069\|Ga0197907_10396110	Not Available	627	Open in IMG/M
3300020082\|Ga0206353_11350847	Not Available	619	Open in IMG/M
3300021078\|Ga0210381_10177313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	735	Open in IMG/M
3300021560\|Ga0126371_10084961	All Organisms → cellular organisms → Bacteria → Proteobacteria	3115	Open in IMG/M
3300021560\|Ga0126371_10581257	Not Available	1269	Open in IMG/M
3300021560\|Ga0126371_12250066	Not Available	658	Open in IMG/M
3300021560\|Ga0126371_12430974	Not Available	634	Open in IMG/M
3300023072\|Ga0247799_1064214	Not Available	626	Open in IMG/M
3300025905\|Ga0207685_10218612	Not Available	905	Open in IMG/M
3300025912\|Ga0207707_10096511	Not Available	2583	Open in IMG/M
3300025921\|Ga0207652_11570731	Not Available	562	Open in IMG/M
3300025929\|Ga0207664_10270201	Not Available	1489	Open in IMG/M
3300025949\|Ga0207667_10968733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	839	Open in IMG/M
3300025961\|Ga0207712_10327216	Not Available	1267	Open in IMG/M
3300025981\|Ga0207640_10166990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1635	Open in IMG/M
3300026118\|Ga0207675_101284805	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300026498\|Ga0257156_1104827	Not Available	588	Open in IMG/M
3300027717\|Ga0209998_10012579	Not Available	1757	Open in IMG/M
3300027873\|Ga0209814_10573512	Not Available	502	Open in IMG/M
3300027907\|Ga0207428_10230793	Not Available	1385	Open in IMG/M
3300027907\|Ga0207428_10377969	Not Available	1040	Open in IMG/M
3300028379\|Ga0268266_11760695	Not Available	594	Open in IMG/M
3300028380\|Ga0268265_11737073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	630	Open in IMG/M
3300028587\|Ga0247828_10041364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1949	Open in IMG/M
3300028590\|Ga0247823_11500827	Not Available	506	Open in IMG/M
3300028592\|Ga0247822_10546539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	922	Open in IMG/M
3300028791\|Ga0307290_10329765	Not Available	559	Open in IMG/M
3300028793\|Ga0307299_10354987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	550	Open in IMG/M
3300031231\|Ga0170824_102288293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1062	Open in IMG/M
3300031231\|Ga0170824_117607228	Not Available	594	Open in IMG/M
3300031446\|Ga0170820_13284494	Not Available	649	Open in IMG/M
3300031446\|Ga0170820_13646236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	723	Open in IMG/M
3300031474\|Ga0170818_100356395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1080	Open in IMG/M
3300031720\|Ga0307469_10482842	Not Available	1081	Open in IMG/M
3300031740\|Ga0307468_102195199	Not Available	534	Open in IMG/M
3300031820\|Ga0307473_10363288	Not Available	936	Open in IMG/M
3300031820\|Ga0307473_11359097	Not Available	534	Open in IMG/M
3300031847\|Ga0310907_10524735	Not Available	636	Open in IMG/M
3300031940\|Ga0310901_10150530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	891	Open in IMG/M
3300032017\|Ga0310899_10136484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1033	Open in IMG/M
3300032075\|Ga0310890_10042283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2551	Open in IMG/M
3300032122\|Ga0310895_10584723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	571	Open in IMG/M
3300032174\|Ga0307470_10305264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300032179\|Ga0310889_10100573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1230	Open in IMG/M
3300032180\|Ga0307471_100163548	Not Available	2165	Open in IMG/M
3300032180\|Ga0307471_100891716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300032205\|Ga0307472_100968287	Not Available	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.10%
Host-Associated	Host-Associated	32.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.81%
Plants	Host-Associated → Plants	31.61%
Aquatic	Environmental → Aquatic	1.29%
Human	Host-Associated → Human	1.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.90%
Freshwater	Environmental → Aquatic → Freshwater	1.29%
Digestive System	Host-Associated → Human → Digestive System	1.29%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.13%
Loam	Environmental → Terrestrial → Soil → Loam	14.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.58%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.58%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.29%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222075804	2209111022	Grass Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVELAADGVTDPAQLRRLTLESLPLSPAH
JGI1027J12803_1082628842	3300000955	Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKDLSIEISRKLVELAAAGVTDPAQLRRLALESLP
JGI24746J21847_10390421	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTL
JGI24747J21853_10173872	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSXAH*
JGI24750J21931_10045803	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLS
JGI24034J26672_100751061	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	FNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0062589_1022178101	3300004156	Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0062589_1028010251	3300004156	Soil	TPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0058859_100052621	3300004798	Host-Associated	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0058862_106601052	3300004803	Host-Associated	MSPQNPFDDPKLVRELAHTFESVWLVMRAHEPLVDADRAKELSIEISRKLVKLAADGVTDPAQLR
Ga0065712_107318001	3300005290	Miscanthus Rhizosphere	AVFPPVTAWREAMTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0066388_1008970492	3300005332	Tropical Forest Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVELAADGVTDPAQLRRLTLESLPLSPASMRLRNVEPVGQRRNC*
Ga0066388_1056252291	3300005332	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEISRKLVELAADGVTDPLQLRRLTLESLPLSPAH*
Ga0066388_1065405031	3300005332	Tropical Forest Soil	PKLVIKLAQAFESIWLVMCAHEPLLDADRAKELSIEVSRRLVELAADGVTDPVQLRRLTLESLPLSPAH*
Ga0066388_1077314791	3300005332	Tropical Forest Soil	MSPQNPFDNPKLLIELAQAFESIWLVMSAHEPLLDGDRAKELSIEVSRKLVELAADGVTDRVQLRRLTLESLPLFAAH*
Ga0070668_1008258331	3300005347	Switchgrass Rhizosphere	VAERGKSRSRLQTQGGSLMIAKSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELGIEISRRLVELAADGVTDPAQLRRLTLESLPLPGTVARSA*
Ga0070703_104040431	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKPYPGE
Ga0070710_114340912	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPHNPFDDPKLVTELAHAFESIWLAMRAHDSLLDADRANDLSIEISRKLVELAADGVTDPAQLRRLTLESLPLFPDLPDSALPQGRGASGS*
Ga0070711_1003541881	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSPQNPFDDPKLLTALAQAFESTWLVMQTREPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLALESLPLSLAH*
Ga0070711_1005116761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSPHNPFDDPKLVTELAHAFESIWLAMRAHDSLLDADRANDLSIEISRKLVELAAAGVTDPTQLRRLALESLPLSPAYWPAFSAKGSSGRSGG*
Ga0070708_1021355721	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLT
Ga0070681_103431523	3300005458	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHVPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0070699_1003428983	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHESILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0073909_101142331	3300005526	Surface Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAADGVTDPTQLRRLTLEGLPLSPP
Ga0070672_1008530641	3300005543	Miscanthus Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALECLPLSPAH*
Ga0068855_1019868621	3300005563	Corn Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQL
Ga0068859_1009074601	3300005617	Switchgrass Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKCLSIEICRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0066905_1000797291	3300005713	Tropical Forest Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVELAADGVTDPAQLRRLTLESLPLSPAH*
Ga0066905_1011571811	3300005713	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESIWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0066905_1022532771	3300005713	Tropical Forest Soil	MSPQNLFDNPKLLIELAQAFESIWLVMCAHEPLLDADRAKELSIEVSRKLVELAADGVTDPVQLRR
Ga0066903_1001609075	3300005764	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMCAHEPLLDADRAKELSVEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0066903_1003528352	3300005764	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMCAHEPLLDADRAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSLAR*
Ga0066903_1085510501	3300005764	Tropical Forest Soil	MSPQNPFDDPKLLIELAQAFESIWLVMRAHEPLLDGDRAKELSIEVSRKLVELAADGVTDRAQLRRLTLESLPLFAAH*
Ga0068862_1007766972	3300005844	Switchgrass Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALASLPLSPAH*
Ga0075432_102902812	3300006058	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRK
Ga0070712_1011741143	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKL
Ga0097621_1005142371	3300006237	Miscanthus Rhizosphere	ELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0075421_1007180861	3300006845	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0075430_1017383621	3300006846	Populus Rhizosphere	NNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0075431_1001080205	3300006847	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH*
Ga0075433_111209061	3300006852	Populus Rhizosphere	NLFDDPKLVTELAQTFESIWLVMRAHEPLVDADRVKELSSEISRKLVELAADGVTDPAQLRKRTLESLPLSPPH*
Ga0075434_1003186142	3300006871	Populus Rhizosphere	MTPQNRFNNSKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAELRRLTLESLPLSPAH*
Ga0075429_1004860751	3300006880	Populus Rhizosphere	AQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0075426_103336743	3300006903	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKPYPGESASLPDTLARAVRRAALVLPADV*
Ga0075436_1002718001	3300006914	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAELRRLTLESLPLSPAH*
Ga0105251_105100231	3300009011	Switchgrass Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPLLDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0075418_104991352	3300009100	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKPYPGESASLPDTLARAVRRAALVLPADV*
Ga0105247_102352511	3300009101	Switchgrass Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALASLPR
Ga0105247_112332252	3300009101	Switchgrass Rhizosphere	MRPQNPFDNPKLLIELAQAFDSIWLVMRAHEPLLGADRAKELSLEISRKLVELAADGVRDPTQLRRLALESLPLSPAH*
Ga0105243_122346311	3300009148	Miscanthus Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKFVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0111538_108991001	3300009156	Populus Rhizosphere	MSPHNLFDDQKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0111538_122544462	3300009156	Populus Rhizosphere	VTALAQAFESTCLVMQAHEPLLDADRVTELSIEISRKLVELAADGVTDPAQLRRLALQSLPLSPAH*
Ga0075423_123211921	3300009162	Populus Rhizosphere	MSPENLFDDPKLVTELAQTFESIWLVMQAHEPLVDADRVKELSSEISRKLVELAADGVAQLRRLTLESLPLPGTVARSA*
Ga0105242_119382401	3300009176	Miscanthus Rhizosphere	KLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0105249_105127363	3300009553	Switchgrass Rhizosphere	MSPQNPFDDPKLVRELAHTFESVWLVMRAHEPLVDADRAKELSIEISRKLVALAADGVTDPAQLRRLTLESLPLPGTV
Ga0126374_100672173	3300009792	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMCAHEPLLDADRAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0126380_103076463	3300010043	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSLAR*
Ga0126384_107494901	3300010046	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLTPAH*
Ga0126382_101952521	3300010047	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0126373_121042871	3300010048	Tropical Forest Soil	NPFDNPKLLIKLAQAFESVWLVMCAHEPLLDADRAKELSVEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0127503_106158021	3300010154	Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPFLDADRANDLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAY*
Ga0126370_104184042	3300010358	Tropical Forest Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVELAADGVTDRVQLRRLTLESLPLFAAH*
Ga0126376_127752381	3300010359	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDGDRAKELSIEVSRKLVELAADGVTDRVQLRRLTLESLPLSPAH*
Ga0126372_100262201	3300010360	Tropical Forest Soil	VTAWREAMSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEISRKLVELAADGVTDPLQLRRLTLESLPLSPAH*
Ga0126378_100731406	3300010361	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHELLLDAERAKELSIEVSGKLVELAANGVTDPVQLRRLTLESLPLSPAH*
Ga0126378_101504405	3300010361	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLYPAH*
Ga0126377_115947771	3300010362	Tropical Forest Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELCIEISRKLVELAADGVTDPAQLRRLTLESLPLSPAH*
Ga0126377_124615021	3300010362	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAR*
Ga0126379_106721991	3300010366	Tropical Forest Soil	MSPRNPFDNPKLLIELAQAFESIWLVMSAHEPLLDGDRAKELSIEVSRKLVELAADGVTDRVQLRRLTLESLPLFAAH*
Ga0126383_134786961	3300010398	Tropical Forest Soil	NPFDNPKLLIELAQAFESIWLVMSAHEPLLDGYRAKELSIEVSRKLVELAADGVTDRVQLRRLTLESLPLSPAH*
Ga0150983_105575441	3300011120	Forest Soil	MSVPSELRVEMLGNEIIVKLLTALAQAFESTCLVMQAHEPPLDVDRATELSVEISRKLVELAADGVTDPVQLRRLALESLPLPGTLARFFELVIRYRWR*
Ga0150985_1115335362	3300012212	Avena Fatua Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVIQAHEAILDPILDPDRSKELSSEISRKLVELATYGVTDPAQLRKLTLESLPLSPAH*
Ga0157336_10115121	3300012477	Arabidopsis Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKELSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0157305_102832161	3300012891	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKRTLESLPLSPPH*
Ga0157284_100361171	3300012893	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLPGTVARSA*
Ga0157299_101364351	3300012899	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKRTLESLPLSPAH*
Ga0157283_100608362	3300012907	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPTH*
Ga0157308_103114682	3300012910	Soil	VFPPVTAWREAITPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLR
Ga0157306_100371741	3300012912	Soil	VFPPVTAWREAITPQNPFNNPKLLIELAQAFESIWLVMRAHESLHDTDRAKELSLEISRKLVELAADGVTDTTQLRRLALESLPLSPAH*
Ga0157297_101331581	3300012914	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMAAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH*
Ga0137404_113243012	3300012929	Vadose Zone Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSKISRKLVELAAFGVTDPAQLRKLTLESLPLSPAH*
Ga0137404_121942702	3300012929	Vadose Zone Soil	MSPQNPFDDPKLVTALAQAFESTWLVMQSHEPLLDADRAMELSIEISRKLVELAADGVTDPAQLRRLALESLPLSPAH*
Ga0164303_100494464	3300012957	Soil	WREAMTPQNPFSNPKLLIELAQAFESIWLVMEAHEPILDPILDADRTKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0164303_100762933	3300012957	Soil	FESIWLAMRAHDPLLDADRANDLSIEISRKLVELAAAGVTDPTQLRRLALESLPLSPAYWPAFSAKGSSGRSGG*
Ga0164299_101143474	3300012958	Soil	MSPHNPFDDPKLVTELALAFESIWLVMRAHDPLLDADKANDLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH*
Ga0164301_113874382	3300012960	Soil	MSPQNPFDDPKLVTELAHTFESIWLVMRAHEPLLDADRTKELSIEISRKLVELAADGVTDPAQLRRLTLESLPLFPAD*
Ga0164301_116469732	3300012960	Soil	WREEMSPHNPFDDQKLVTELAQAFESIWLVMRAHDPLLDAERANDLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSLPH*
Ga0164302_104328591	3300012961	Soil	PKLVTELAHTFESIWLVMRAHEPLLDADRAKELSIEISRKLVELAADGVTDPAQLRRLALESLPLSPAH*
Ga0164302_105152562	3300012961	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLR
Ga0126369_124329931	3300012971	Tropical Forest Soil	MSPQNPFDNPKLLIELAQAFESIWLVMSAHEPLLDGDRAKELSIEVSRKLVELAADGVTDPAQLRRLTLENLPLSQAH*
Ga0164308_101745393	3300012985	Soil	VTELAQAFESIWLVMRAHDPLLDADRAVDLSVEISRKLVELAAAGATDPAQLRRLALESLPLSPALASVGAAQPQW*
Ga0164308_107174612	3300012985	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSKISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0164304_101870112	3300012986	Soil	MSPQNPFDDPKLLTALAQAFESTWLVMQTREPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLALAASLPGTLARFFELVIRYRWR*
Ga0164307_106597091	3300012987	Soil	MCPQNPFDDPKLLTALAQAFESTWLVMQAHEPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLALESLPLSLAH*
Ga0164305_114444101	3300012989	Soil	MSPQNPFDDPKLLTALAQAFESTWLAMQAHEPPLDADRATELSVEISRKLVELAADGVTDPAQLR
Ga0157371_100207518	3300013102	Corn Rhizosphere	MTPQNPFKNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0157370_103766112	3300013104	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPIPDAERAKELSSEISWKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0163162_119257632	3300013306	Switchgrass Rhizosphere	MSPQNLFDDPKLVTELAQTFESIWLVMRAHEPLVDADRVKELSGAISRKLVDLAADGVTDPAQLRRLTLESLPLSPAH*
Ga0173483_108031471	3300015077	Soil	EAMTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH*
Ga0132257_1016020112	3300015373	Arabidopsis Rhizosphere	PKLVTELAHTFESIWLVMRAHEPLLDADRAKELSIEIRRKLVELAAGGVTDPAQLRRLTLESLPLFSGTLARSA*
Ga0132257_1030436362	3300015373	Arabidopsis Rhizosphere	MTPQNRFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH*
Ga0182041_111464501	3300016294	Soil	MSPQNLFDDPKLVRELAQAFESIWLVMSAHEPLLDGDRAKELSIEVSRKLVELAADGVTDRGQLRRLTLESLPLFAAH
Ga0182033_104732212	3300016319	Soil	MSPQNLFDDPKLVRELAQAFESIWLVMRAHEPLLDAERTKELAIEISRTLVELAADGVTDPAQLRRLTLESLPLSPAH
Ga0163161_103119772	3300017792	Switchgrass Rhizosphere	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVGADRAKELSIEISRKLVALAADGVTDPAQLRRLTLESLPLSPAH
Ga0163161_106727322	3300017792	Switchgrass Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0173481_100373123	3300019356	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0173482_100827162	3300019361	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH
Ga0173479_100745431	3300019362	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0197907_103961101	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	PVTAWREAMTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0206353_113508472	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	ELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0210381_101773131	3300021078	Groundwater Sediment	MIRKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0126371_100849616	3300021560	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMCAHEPLLDADRAKELSVEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH
Ga0126371_105812573	3300021560	Tropical Forest Soil	MSPQNPFDNPKLLIELAQAFESIWLVMRAHEPLLDAERAKELSIEVSRKLVELAADGVTDRAQLRRLTLESLPLFAAH
Ga0126371_122500662	3300021560	Tropical Forest Soil	MSPQNPFDNPKLLIKLAQAFESVWLVMRAHEPLLDAERAKELSIEVSRKLVELAANGVTDPVQLRRLTLESLPLSPAH
Ga0126371_124309741	3300021560	Tropical Forest Soil	MSPQNPFDNPKLLIELAQAFESIWLVLCAHEPLLDADRAKELSIEVSRKLVELAADGVTDPVQLR
Ga0247799_10642142	3300023072	Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPTHSP
Ga0207685_102186122	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	REAMTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH
Ga0207707_100965114	3300025912	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHVPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0207652_115707312	3300025921	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPLLDADRAKELSSEISRKLVELAAYGVTDPAQLRKL
Ga0207664_102702013	3300025929	Agricultural Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAH
Ga0207667_109687332	3300025949	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLES
Ga0207712_103272162	3300025961	Switchgrass Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDGQSSKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0207640_101669903	3300025981	Corn Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHGRFLDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0207675_1012848051	3300026118	Switchgrass Rhizosphere	MSPQNPFDDPKLVRELAHTFESVWLVMRAHEPLVDADRAKELGIEISRKLVELAADGVTDPAQLRRLTLESLPLSSRLLGGSGKRVSP
Ga0257156_11048271	3300026498	Soil	MTPQNPFSNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSKISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0209998_100125792	3300027717	Arabidopsis Thaliana Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHESILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0209814_105735122	3300027873	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLE
Ga0207428_102307931	3300027907	Populus Rhizosphere	AMTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0207428_103779692	3300027907	Populus Rhizosphere	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRKPYPGESASLPDTLARAVRRAALVLPADV
Ga0268266_117606952	3300028379	Switchgrass Rhizosphere	KLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLESLPLSPAH
Ga0268265_117370732	3300028380	Switchgrass Rhizosphere	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALASLPLSPAH
Ga0247828_100413641	3300028587	Soil	PHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKDLSIEISRKLVELAAAGVTDPTQLRRLALESLPLSPAH
Ga0247823_115008271	3300028590	Soil	VTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLIELAADGVTDSAQLRRLTLESLPLSPAH
Ga0247822_105465392	3300028592	Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKDLSIEISRKLVELAAAGVTDPTQLRRLALESLPLSPAH
Ga0307290_103297651	3300028791	Soil	EMSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0307299_103549871	3300028793	Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRL
Ga0170824_1022882932	3300031231	Forest Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRANDLSIEISRKLVELAAAGVTDPAQLRRLALESLPL
Ga0170824_1176072282	3300031231	Forest Soil	MSPQNPFDDPKLLTALAQAFESTWLAMQAHEPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLALESLPLPGTLARSA
Ga0170820_132844941	3300031446	Forest Soil	MSPQNPFDDPKLLTALAQAFESTWLAMQAHEPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLTLESLPLSPKAFV
Ga0170820_136462362	3300031446	Forest Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAY
Ga0170818_1003563952	3300031474	Forest Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDGDRANDLSIEISRKLVELAAAGVTDPAQLRRLALESLPL
Ga0307469_104828422	3300031720	Hardwood Forest Soil	MSPQNPLDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVALAADGVTDPAQLRRLTLESLPLPGTVARSA
Ga0307468_1021951992	3300031740	Hardwood Forest Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKDLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0307473_103632881	3300031820	Hardwood Forest Soil	MTPQNPFNNPKLLIELAQAFESIWLVMEAHEPILDPILDADRAKELSSEISRKLVELAAYGVTDPAQLRKLTLE
Ga0307473_113590972	3300031820	Hardwood Forest Soil	MSPQNPFDDPKLVTELAHTFESIWLVMRAHEPLDDADRAKELSIEISRKLVELAADGVTDPAQLRRLTLESLPLPGTVARSA
Ga0310907_105247352	3300031847	Soil	PHNPFDDQKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0310901_101505303	3300031940	Soil	MSPHNPFDDQKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSAAH
Ga0310899_101364842	3300032017	Soil	MSPHNLFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAHQAAFSAKGSSGRSGG
Ga0310890_100422832	3300032075	Soil	MSHHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0310895_105847231	3300032122	Soil	MSPHNLFDYPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0307470_103052641	3300032174	Hardwood Forest Soil	MSPQNPLHDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELGSEISRKLVELAADGVTDPAQLRRLTLESLPLSPAH
Ga0310889_101005732	3300032179	Soil	MSPHNPFDDPKLVTELAQAFESIWLVMRAHDPLLDADRAKGLSIEISRKLVELAAAGVTDPAQLRRLALESLPLSPAH
Ga0307471_1001635481	3300032180	Hardwood Forest Soil	MSPQNPFDDPKLLTALAQAFESTWLVMQTREPPLDADRATELSVEISRKLVELAADGVTDPAQLRRLALESLPLSLAH
Ga0307471_1008917161	3300032180	Hardwood Forest Soil	MSPQNPFDDPKLVTELAQTFESIWLVMRAHEPLVDADRAKELSIEISRKLVALAADGVTDPAQLRRLTLESLPLPGTVARSA
Ga0307472_1009682871	3300032205	Hardwood Forest Soil	MTPQNRFNNPKLLIELAQAFESIWLVMEAHEPILDPILEADRAKELSSEISRKLVELAAYGVTDPAQLRRLTLESLPLSPAHEPELFVVLRLFCPQMFNDVSG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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