Metagenome / Metatranscriptome Family F044139

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044139
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	40 residues
Representative Sequence	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGS
Number of Associated Samples	107
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.19 %
% of genes near scaffold ends (potentially truncated)	19.35 %
% of genes from short scaffolds (< 2000 bps)	78.06 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.484 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.839 % of family members)
Environment Ontology (ENVO)	Unclassified (24.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.065 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF10611	DUF2469	25.81
PF03816	LytR_cpsA_psr	19.35
PF13399	LytR_C	12.90
PF01351	RNase_HII	12.90
PF02021	UPF0102	3.87
PF13530	SCP2_2	2.58
PF10502	Peptidase_S26	1.94
PF01245	Ribosomal_L19	1.94
PF12840	HTH_20	1.29
PF03572	Peptidase_S41	0.65
PF01557	FAA_hydrolase	0.65
PF05239	PRC	0.65
PF14622	Ribonucleas_3_3	0.65
PF00583	Acetyltransf_1	0.65
PF13738	Pyr_redox_3	0.65
PF07478	Dala_Dala_lig_C	0.65
PF01746	tRNA_m1G_MT	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	19.35
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	12.90
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	12.90
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	3.87
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	1.94
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.48 %
Unclassified	root	N/A	24.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.48 %
Unclassified	root	N/A	24.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.48 %
Unclassified	root	N/A	24.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.39 %
Unclassified	root	N/A	24.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.39 %
Unclassified	root	N/A	24.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.13 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.52 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	4.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Aciditerrimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas	3.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.65 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	3.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %
Micromonospora sagamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora sagamiensis	0.65 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.52 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	3.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.94 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.65 %
Micromonospora sagamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora sagamiensis	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100590653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300002899\|JGIcombinedJ43975_10054004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300003203\|JGI25406J46586_10042147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1600	Open in IMG/M
3300003203\|JGI25406J46586_10104266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300003373\|JGI25407J50210_10006448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2922	Open in IMG/M
3300003373\|JGI25407J50210_10050267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300003373\|JGI25407J50210_10108169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300003373\|JGI25407J50210_10120766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300003373\|JGI25407J50210_10143966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300003373\|JGI25407J50210_10185605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300004016\|Ga0058689_10039827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300004157\|Ga0062590_102531146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300004463\|Ga0063356_103026936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300004479\|Ga0062595_102411698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300005436\|Ga0070713_100223958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1707	Open in IMG/M
3300005562\|Ga0058697_10245752	Not Available	831	Open in IMG/M
3300005562\|Ga0058697_10302345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300005562\|Ga0058697_10789653	Not Available	512	Open in IMG/M
3300005937\|Ga0081455_10039058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4198	Open in IMG/M
3300005981\|Ga0081538_10006598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10186	Open in IMG/M
3300005981\|Ga0081538_10013000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6623	Open in IMG/M
3300005981\|Ga0081538_10045989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2699	Open in IMG/M
3300005981\|Ga0081538_10076140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1816	Open in IMG/M
3300005981\|Ga0081538_10209231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300005981\|Ga0081538_10306655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300005985\|Ga0081539_10041512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2688	Open in IMG/M
3300005985\|Ga0081539_10099913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1481	Open in IMG/M
3300005985\|Ga0081539_10145781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300005985\|Ga0081539_10222773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300006046\|Ga0066652_100251174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1549	Open in IMG/M
3300006169\|Ga0082029_1176679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1806	Open in IMG/M
3300006791\|Ga0066653_10613806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300006844\|Ga0075428_100932174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300006845\|Ga0075421_100156685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2844	Open in IMG/M
3300006845\|Ga0075421_101238363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300006846\|Ga0075430_100531795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300009094\|Ga0111539_11463775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300009100\|Ga0075418_10529565	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300009157\|Ga0105092_10546591	Not Available	666	Open in IMG/M
3300009789\|Ga0126307_10056752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3066	Open in IMG/M
3300009789\|Ga0126307_10245339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300009789\|Ga0126307_10594830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300009801\|Ga0105056_1012352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300009803\|Ga0105065_1007690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1072	Open in IMG/M
3300009806\|Ga0105081_1066429	Not Available	557	Open in IMG/M
3300009817\|Ga0105062_1051898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300009837\|Ga0105058_1017305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300009840\|Ga0126313_10027591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3860	Open in IMG/M
3300009840\|Ga0126313_10854617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300010037\|Ga0126304_10412679	Not Available	902	Open in IMG/M
3300010038\|Ga0126315_10058607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2112	Open in IMG/M
3300010038\|Ga0126315_10535847	Not Available	750	Open in IMG/M
3300010041\|Ga0126312_10141299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1667	Open in IMG/M
3300010145\|Ga0126321_1058099	Not Available	552	Open in IMG/M
3300010145\|Ga0126321_1299673	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300010166\|Ga0126306_10004882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8030	Open in IMG/M
3300010329\|Ga0134111_10155087	Not Available	908	Open in IMG/M
3300010362\|Ga0126377_10000148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38254	Open in IMG/M
3300010999\|Ga0138505_100072127	Not Available	512	Open in IMG/M
3300011000\|Ga0138513_100026755	Not Available	822	Open in IMG/M
3300012021\|Ga0120192_10033346	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012201\|Ga0137365_10125516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1929	Open in IMG/M
3300012204\|Ga0137374_10001117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29829	Open in IMG/M
3300012204\|Ga0137374_10012272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9992	Open in IMG/M
3300012204\|Ga0137374_10014529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9110	Open in IMG/M
3300012204\|Ga0137374_10043964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4690	Open in IMG/M
3300012204\|Ga0137374_10054203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4095	Open in IMG/M
3300012204\|Ga0137374_10074916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3311	Open in IMG/M
3300012204\|Ga0137374_10157785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2016	Open in IMG/M
3300012204\|Ga0137374_10178833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300012204\|Ga0137374_10477975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300012206\|Ga0137380_10427304	Not Available	1174	Open in IMG/M
3300012350\|Ga0137372_10129023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2086	Open in IMG/M
3300012350\|Ga0137372_10515879	Not Available	887	Open in IMG/M
3300012353\|Ga0137367_11154535	Not Available	520	Open in IMG/M
3300012354\|Ga0137366_10083845	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300012354\|Ga0137366_10102407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2169	Open in IMG/M
3300012354\|Ga0137366_10379803	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300012354\|Ga0137366_11228535	Not Available	508	Open in IMG/M
3300012355\|Ga0137369_10134725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1979	Open in IMG/M
3300012356\|Ga0137371_10045414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3393	Open in IMG/M
3300012360\|Ga0137375_10692891	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300012529\|Ga0136630_1349460	Not Available	527	Open in IMG/M
3300013772\|Ga0120158_10294663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	788	Open in IMG/M
3300014488\|Ga0182001_10135537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300014965\|Ga0120193_10006837	Not Available	976	Open in IMG/M
3300017654\|Ga0134069_1221127	Not Available	651	Open in IMG/M
3300017965\|Ga0190266_10254873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300017997\|Ga0184610_1003845	Not Available	3486	Open in IMG/M
3300017997\|Ga0184610_1326108	Not Available	503	Open in IMG/M
3300018027\|Ga0184605_10114566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1197	Open in IMG/M
3300018028\|Ga0184608_10173930	Not Available	937	Open in IMG/M
3300018028\|Ga0184608_10494434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018052\|Ga0184638_1155552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300018052\|Ga0184638_1281090	Not Available	566	Open in IMG/M
3300018056\|Ga0184623_10199483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300018063\|Ga0184637_10000020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	100137	Open in IMG/M
3300018071\|Ga0184618_10227957	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300018074\|Ga0184640_10150910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1036	Open in IMG/M
3300018075\|Ga0184632_10158633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300018076\|Ga0184609_10119585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1196	Open in IMG/M
3300018078\|Ga0184612_10076595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1745	Open in IMG/M
3300018422\|Ga0190265_10357701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1548	Open in IMG/M
3300018422\|Ga0190265_10847616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1037	Open in IMG/M
3300018432\|Ga0190275_10355093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1459	Open in IMG/M
3300018465\|Ga0190269_11957373	Not Available	508	Open in IMG/M
3300019254\|Ga0184641_1097850	Not Available	970	Open in IMG/M
3300019377\|Ga0190264_10079209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300019767\|Ga0190267_10179380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300019767\|Ga0190267_11143031	Not Available	564	Open in IMG/M
3300019867\|Ga0193704_1020593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300021073\|Ga0210378_10013768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3342	Open in IMG/M
3300021080\|Ga0210382_10266056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300021510\|Ga0222621_1011597	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300025928\|Ga0207700_10308706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora sagamiensis	1368	Open in IMG/M
3300026673\|Ga0208847_102321	Not Available	547	Open in IMG/M
3300027056\|Ga0209879_1016679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300027163\|Ga0209878_1025617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300027379\|Ga0209842_1015573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1490	Open in IMG/M
3300027523\|Ga0208890_1087372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300027750\|Ga0209461_10047061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300027750\|Ga0209461_10125010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	606	Open in IMG/M
3300027909\|Ga0209382_10401055	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300027909\|Ga0209382_11882812	Not Available	579	Open in IMG/M
3300027952\|Ga0209889_1004319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3909	Open in IMG/M
3300028704\|Ga0307321_1131714	Not Available	523	Open in IMG/M
3300028711\|Ga0307293_10024081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1812	Open in IMG/M
3300028711\|Ga0307293_10102162	Not Available	909	Open in IMG/M
3300028719\|Ga0307301_10282345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300028744\|Ga0307318_10039829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300028771\|Ga0307320_10305923	Not Available	631	Open in IMG/M
3300028799\|Ga0307284_10333995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300028824\|Ga0307310_10157099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300028828\|Ga0307312_10129394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1588	Open in IMG/M
3300028878\|Ga0307278_10000454	All Organisms → cellular organisms → Bacteria	20642	Open in IMG/M
3300028878\|Ga0307278_10001998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10039	Open in IMG/M
3300028881\|Ga0307277_10498045	Not Available	546	Open in IMG/M
3300030336\|Ga0247826_10244408	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300030496\|Ga0268240_10169944	Not Available	546	Open in IMG/M
3300030499\|Ga0268259_10005472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2155	Open in IMG/M
3300030499\|Ga0268259_10183223	Not Available	512	Open in IMG/M
3300030830\|Ga0308205_1045101	Not Available	575	Open in IMG/M
3300031229\|Ga0299913_10584605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1100	Open in IMG/M
3300031421\|Ga0308194_10053828	Not Available	1038	Open in IMG/M
3300031731\|Ga0307405_10039536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2851	Open in IMG/M
3300031731\|Ga0307405_10064331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2331	Open in IMG/M
3300031824\|Ga0307413_10872478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300031901\|Ga0307406_11632494	Not Available	570	Open in IMG/M
3300032002\|Ga0307416_100974429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	950	Open in IMG/M
3300032002\|Ga0307416_102881900	Not Available	575	Open in IMG/M
3300032002\|Ga0307416_103388291	Not Available	533	Open in IMG/M
3300032159\|Ga0268251_10008392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2816	Open in IMG/M
3300032159\|Ga0268251_10135571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300034026\|Ga0334946_026142	Not Available	964	Open in IMG/M
3300034172\|Ga0334913_008690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.97%
Host-Associated	Host-Associated	29.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.77%
Plants	Host-Associated → Plants	29.03%
Aquatic	Environmental → Aquatic	14.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.48%
Sediment	Environmental → Aquatic → Sediment	9.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.68%
Roots	Host-Associated → Plants → Roots	7.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.16%
Freshwater	Environmental → Aquatic → Freshwater	4.52%
Phyllosphere	Host-Associated → Plants → Phyllosphere	3.23%
Phylloplane	Host-Associated → Plants → Phylloplane	3.23%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	7.74%
Sand	Environmental → Terrestrial → Soil → Sand	5.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.16%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	3.23%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.58%
Loam	Environmental → Terrestrial → Soil → Loam	1.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.29%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.29%
Ice	Environmental → Aquatic → Freshwater → Ice	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	7.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.16%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.29%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.29%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.29%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.03%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	7.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.45%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.16%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.52%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	3.23%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.58%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.29%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.29%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.29%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.65%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026673	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1116 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1005906532	3300000956	Soil	VGFNATRRYRDKKTIDIAILLAAVVIILGLVGWVLAAGGS*
JGIcombinedJ43975_100540042	3300002899	Soil	MGFNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGS*
JGI25406J46586_100421471	3300003203	Tabebuia Heterophylla Rhizosphere	SIMGFNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGT*
JGI25406J46586_101042663	3300003203	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTIDLAILIAAIVIIAGLLGWVFAAGGR*
JGI25407J50210_100064485	3300003373	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDRKTVDIALLIAAVLIVLALLAWVFAAGGS*
JGI25407J50210_100502672	3300003373	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFAAGGA*
JGI25407J50210_101081692	3300003373	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGN*
JGI25407J50210_101207662	3300003373	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDRKTVDIALLVAAVAIVIGLLAWVFSAGGS*
JGI25407J50210_101439662	3300003373	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDIALLIAAVLIVLALLAWVFAAGGS*
JGI25407J50210_101856052	3300003373	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS*
Ga0058689_100398271	3300004016	Agave	VGFNATRRYRDKKTVDLAILISAIVIVALLVGWVFAAGGR*
Ga0062590_1025311462	3300004157	Soil	MGFNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGT*
Ga0063356_1030269363	3300004463	Arabidopsis Thaliana Rhizosphere	MGFNATRRYRDKKTVDIAILVAALVIIGGLLAWVLAAGGN*
Ga0062595_1024116981	3300004479	Soil	GFNATRRYRDKKTVDIALLAAAILIVIGLLAWVFAAGGS*
Ga0070713_1002239583	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGFNATRRYRGKKTVDLAILIAAIVIVAVLVGWVLAAGGR*
Ga0058697_102457522	3300005562	Agave	GFNATRRYRDKKTVDLAILISAIVIVALLVGWVFAAGGR*
Ga0058697_103023452	3300005562	Agave	MGFNATRRYRDKKTVDIALLVAAIVIIIALLAWVFAAGGS*
Ga0058697_107896532	3300005562	Agave	MGFNATRRYRDKKTVDIALLVAAIVIVIALLGWVFAAGGS*
Ga0081455_100390582	3300005937	Tabebuia Heterophylla Rhizosphere	VLIEGGPVGFNATRRYRDKKTIDLAILVAAIVIVGLLVGWVLAAGGR*
Ga0081538_1000659815	3300005981	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFAAGGS*
Ga0081538_100130007	3300005981	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS*
Ga0081538_100459894	3300005981	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDKKTVDIALLVAAILIVLALLGWVFAAGGS*
Ga0081538_100761402	3300005981	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDRKTVDIALLVTAILIIVGLLAWVFAAGGS*
Ga0081538_102092312	3300005981	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDKKTVDIALLVAAVLIVLGLLAWVFAAGGN*
Ga0081538_103066552	3300005981	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGS*
Ga0081539_100415124	3300005985	Tabebuia Heterophylla Rhizosphere	IMGFNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGS*
Ga0081539_100999132	3300005985	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDTKWVDIGLLIAAVVIIAALLAWVLLG*
Ga0081539_101457811	3300005985	Tabebuia Heterophylla Rhizosphere	MGFNATRRYRDKKTVDIALLVAAIVIVVALLGWVVAAGGS*
Ga0081539_102227731	3300005985	Tabebuia Heterophylla Rhizosphere	VGFNATRRYRDKKTVDLAILIAAIVIVALLVGWVLAAGGR*
Ga0066652_1002511742	3300006046	Soil	LGYNVTRRYRGKKSVDVAILVAALLIIGGLLAWVLAAGGH*
Ga0082029_11766792	3300006169	Termite Nest	VSVGFNATRRYRDKKTVDIALLIAAVLIVLALLGWVFAAGGS*
Ga0066653_106138061	3300006791	Soil	LGYNVTRRYRGKKSVDVAILVAALVIIGGLLAWVLAAGGH*
Ga0075428_1009321742	3300006844	Populus Rhizosphere	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGS*
Ga0075421_1001566853	3300006845	Populus Rhizosphere	VGFNATRRYRDKKTIDLAILVSAIVIIAVLVGWVLAAGGR*
Ga0075421_1012383632	3300006845	Populus Rhizosphere	VGFNATRRYRGKKTVDLAILISAIVIVTLLVGWVFAAGGR*
Ga0075430_1005317952	3300006846	Populus Rhizosphere	GFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGS*
Ga0111539_114637752	3300009094	Populus Rhizosphere	GFNATRRYRDKKTVDIALLVAAIVIVIGLLAGVFSAGGS*
Ga0075418_105295653	3300009100	Populus Rhizosphere	MGFNATRRYRDKKTVDIAILISALVIIGGLLAWVLAAGGN*
Ga0105092_105465912	3300009157	Freshwater Sediment	GFNATRRYRDRKTVDIALLIAAVLIVLALLAWVFAAGGS*
Ga0126307_100567525	3300009789	Serpentine Soil	FNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGT*
Ga0126307_102453392	3300009789	Serpentine Soil	VGFNATRRYRDKKTVDIALLVAAILIVAALLAWVFAAGGT*
Ga0126307_105948302	3300009789	Serpentine Soil	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVLAAGGN*
Ga0105056_10123522	3300009801	Groundwater Sand	VGFNATRRYRDKKTVDIVLLVVAIAIVIGLLAWVFSAGGS*
Ga0105065_10076901	3300009803	Groundwater Sand	RRYRDKKTVDIALLVAAIAIVIGLLAWVFSAGGS*
Ga0105081_10664291	3300009806	Groundwater Sand	VGFNATRRYRDKKTVDIALLVAAVIIVAGLLAWVFAAGGR*
Ga0105062_10518982	3300009817	Groundwater Sand	VGFNATRRYRDRKAVDIALLVAAIAIVIGLLAWVVAAGGS*
Ga0105058_10173052	3300009837	Groundwater Sand	FNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFAAGGS*
Ga0126313_100275916	3300009840	Serpentine Soil	MGFNATRRYRDKKTVDIALLVAAVLIILALLAWVFAAGGS*
Ga0126313_108546172	3300009840	Serpentine Soil	MGFNATRRYRDKKTVDIALLIAAILIVIALLAWVFAAGGT*
Ga0126304_104126792	3300010037	Serpentine Soil	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGN*
Ga0126315_100586072	3300010038	Serpentine Soil	MGFNATRRYRDKKTVDIALLVAAIIIVIALLAWVFAAGGS*
Ga0126315_105358471	3300010038	Serpentine Soil	VGFNATRRYRDKKTVDIALLVAAVAIVIGLLAWVFSAGGS*
Ga0126312_101412991	3300010041	Serpentine Soil	NATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGN*
Ga0126321_10580992	3300010145	Soil	VGFNATRRYRDKKTVDIALLVAAIVIVIALLAWVFSAGGS*
Ga0126321_12996732	3300010145	Soil	MGFNATRRYRDRKTVDVAILTAAVVIILCLLAWVFAAGGR*
Ga0126306_1000488210	3300010166	Serpentine Soil	MGFNATRRYRDKKTVDIALLIAAVLIVLALLAWVFAAGGS*
Ga0134111_101550872	3300010329	Grasslands Soil	VGFNATRRYRDKKTVDIALLVAAILIIIGLLAWVFSAGGS*
Ga0126377_100001487	3300010362	Tropical Forest Soil	MGFNATRRYRDRKWVDIGLLIAAVLIVAALLSWVLTGW*
Ga0138505_1000721271	3300010999	Soil	MGFNATRRYRDKKTVDIALLVAAIVIVIALLAWVFDAGGS*
Ga0138513_1000267552	3300011000	Soil	MGFNATRRYRDKKAVDIALLVAAILIVLGLLAWVFAAGGN*
Ga0120192_100333461	3300012021	Terrestrial	MVGFNATRRYRDRKTVDIALLVAAVAIVIGLLAWVFSAGGS*
Ga0137365_101255162	3300012201	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILLAAVVVVALLVGWVLAAGGR*
Ga0137374_1000111723	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTIDIAILLAAIVIIVGLLGWVFAAGGR*
Ga0137374_100122728	3300012204	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILVAALLIIGGLLAWVLAAGGN*
Ga0137374_100145292	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFSAGGS*
Ga0137374_100439645	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTIDVAILLAAVVIIIGLLAWVFAAGGR*
Ga0137374_100542033	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTIDIAILLAAIVIIIGLLAWVFAAGGR*
Ga0137374_100749162	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTIDLAILIAAIVIVALLVGWVLAAGGR*
Ga0137374_101577853	3300012204	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILVAAVVIIGGLLAWVLAAGGH*
Ga0137374_101788331	3300012204	Vadose Zone Soil	VGFNATRRYRDKKTVDILILVAAIVIVSGLLVWVFAAGGR*
Ga0137374_104779752	3300012204	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILVAAAVIIGGLLAWVLAAGGR*
Ga0137380_104273043	3300012206	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILVAALVIVGGLLAWVLAAGGR*
Ga0137372_101290232	3300012350	Vadose Zone Soil	VGFNATRRYRDKKTVDIAILLAAVVIIALLVGWVLAAGGR*
Ga0137372_105158792	3300012350	Vadose Zone Soil	VGFNATRRYRDKKTVDLAILIAAIVIVAVLVGWVLAAGGR*
Ga0137367_111545352	3300012353	Vadose Zone Soil	VGFNATRRYRDKKTTDLVILISAIVIVAVLVGWVL
Ga0137366_100838454	3300012354	Vadose Zone Soil	FNATRRYRDKKTVDIAILLAAVVVVALLVGWVLAAGGR*
Ga0137366_101024071	3300012354	Vadose Zone Soil	MGFNATRRYRDKKTVDIAILLAAVVVVALLVGWVLAAGG
Ga0137366_103798032	3300012354	Vadose Zone Soil	MRFNATRRYRDKKTTDIAILVAALVIVAGLLLWVVAAGGH*
Ga0137366_112285352	3300012354	Vadose Zone Soil	VGFNATRRYRDKKTTDLVILISAIVIVAVLVGWVLAAGGR*
Ga0137369_101347252	3300012355	Vadose Zone Soil	VGFNATRRYRDRKTVDIALLVAAVIIVAGLLAWVFAAGGR*
Ga0137371_100454144	3300012356	Vadose Zone Soil	MGFNATRRYRDKKTTDVAILVAALVIVAGLLGWVLAAGGH*
Ga0137375_106928912	3300012360	Vadose Zone Soil	GFNATRRYRDKKTVDIAILVAAVVIIGGLLAWVLAAGGH*
Ga0136630_13494602	3300012529	Polar Desert Sand	MGFNATRRYRDSNVLDIVLLFVAEVTIGLLLAWASGVIL*
Ga0120158_102946633	3300013772	Permafrost	VGFNATRRYRGPKTGDIALLIAGIIIIGGLLAWALTA*
Ga0182001_101355372	3300014488	Soil	MGFNATRRYRDKKTVDIALLVAAILIILGLLAWVFAAGGN*
Ga0120193_100068372	3300014965	Terrestrial	VGFNATRRYRDRKTVDIALLVVAVLIVAGLLAWVFAAGGQ*
Ga0134069_12211271	3300017654	Grasslands Soil	LGYNVTRRYRGKKSVDVAILVAALLIIGGLLAWVLAAGGH
Ga0190266_102548732	3300017965	Soil	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGS
Ga0184610_10038455	3300017997	Groundwater Sediment	MGFNATRRYRDKKTVDIAILVAAIVIIGGLLAWVLAAGGS
Ga0184610_13261082	3300017997	Groundwater Sediment	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS
Ga0184605_101145661	3300018027	Groundwater Sediment	TRRYRDKKTVDIALLVAALLIVLGLLAWVFAAGGN
Ga0184608_101739303	3300018028	Groundwater Sediment	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGK
Ga0184608_104944342	3300018028	Groundwater Sediment	MGFNATRRYRDKKAVDIALLVAAILIVLALLAWVFAAGGS
Ga0184638_11555522	3300018052	Groundwater Sediment	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFSAGGS
Ga0184638_12810902	3300018052	Groundwater Sediment	VGFNATRRYRDKKIVDLALLVAAIAIVIGLLAWVFAAGGS
Ga0184623_101994831	3300018056	Groundwater Sediment	VGFNATRRYRDKKVVDIALLVAAILIILGLLTWVFAAGGS
Ga0184637_1000002040	3300018063	Groundwater Sediment	MGFNATRRYRDKKTVDIAILVAAVVIIGGLLAWVLAAGGH
Ga0184618_102279571	3300018071	Groundwater Sediment	LGFNATRRYRGKKTVDLAILISAIVIVAVLVGWVLAAGGR
Ga0184640_101509102	3300018074	Groundwater Sediment	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGN
Ga0184632_101586332	3300018075	Groundwater Sediment	MGFNATRRYRDKKVVDIALLVAAILIILGLLAWVFAAGGS
Ga0184609_101195851	3300018076	Groundwater Sediment	VGFNATRRYRDRKTVDIALLVAAIAIVIGLLAWVVSAGGS
Ga0184612_100765952	3300018078	Groundwater Sediment	MGFNATRRYRDKKTVDISLLVAAILIVLGLLAWVFAAGGS
Ga0190265_103577012	3300018422	Soil	MGFNATRRYRDKKVVDIALLVAAVLIVLGLLAWVFAAGGS
Ga0190265_108476162	3300018422	Soil	NATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS
Ga0190275_103550932	3300018432	Soil	MGFNATRRYRDKKTVDIALLIAAVLIVLALLAWVFAAGGS
Ga0190269_119573732	3300018465	Soil	ASMGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGN
Ga0184641_10978503	3300019254	Groundwater Sediment	MGFNATRRYRDKKAVDIALLVAAILIVLGLLAWVFAAGGN
Ga0190264_100792092	3300019377	Soil	VGFNATRRYRDKKVVDIALLVAAILIIVGLLTWVFAAGGS
Ga0190267_101793803	3300019767	Soil	MGFNATRRYRDRKAVDIALLVAAILIVLALLAWVFAAGGS
Ga0190267_111430312	3300019767	Soil	MGFNATRRYRDKKTVDIALLVAAVLIVLGLLAWVFAAGGS
Ga0193704_10205932	3300019867	Soil	MGFNATRRYRDKKVVDIALLVAAILIVLALLAWVFAAGGS
Ga0210378_100137684	3300021073	Groundwater Sediment	VGFNATRRYRDRKAVDIALLVAAIAIVIGLLAWVVSAGGS
Ga0210382_102660562	3300021080	Groundwater Sediment	MGFNATRRYRDKKAVDIALLVAAILIVLGLLAWVFAAGGS
Ga0222621_10115974	3300021510	Groundwater Sediment	MGFNATRRYRDKKTVDIALLVAAILIVLGLLAWVFAAGGN
Ga0207700_103087063	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGFNATRRYRGKKTVDLAILIAAIVIVAVLVGWVLAAGGR
Ga0208847_1023212	3300026673	Soil	VGFNATRRYRDKKTVDIALLVAAIVIVLALLAWVFAAGGN
Ga0209879_10166792	3300027056	Groundwater Sand	VGFNATRRYRDRKTVDIALLVAAVIIVAGLLAWVFAAGGR
Ga0209878_10256172	3300027163	Groundwater Sand	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVVSAGGS
Ga0209842_10155732	3300027379	Groundwater Sand	VGFNATRRYRDRKAVDIALLVAAIAIVIGLLAWVVAAGGS
Ga0208890_10873722	3300027523	Soil	MGFNATRRYRDAKWVDIGILIAALVIIAGLLGWVLFG
Ga0209461_100470611	3300027750	Agave	VGFNATRRYRDKKTVDLAILISAIVIVALLVGWVFAAGGR
Ga0209461_101250102	3300027750	Agave	GTSMGFNATRRYRDKKTVDIALLAAAILIVLALLAWVFAAGGN
Ga0209382_104010554	3300027909	Populus Rhizosphere	VGFNATRRYRDKKTIDLAILVSAIVIIAVLVGWVLAAGGR
Ga0209382_118828123	3300027909	Populus Rhizosphere	MGFNATRRYRDKKTVDIAILISALVIIGGLLAWVLA
Ga0209889_10043192	3300027952	Groundwater Sand	VGFNATRRYRDKKTVDIALLVAAIAIVIGLLAWVFAAGGS
Ga0307321_11317142	3300028704	Soil	ATRRYRDKKTVDIALLVAAIVIVIALLAWVFAAGGS
Ga0307293_100240812	3300028711	Soil	ATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS
Ga0307293_101021622	3300028711	Soil	MGFNATRRYRDKKTVDIALLVAAILIVLALLAWVFA
Ga0307301_102823452	3300028719	Soil	MGFNATRRYRDKKTVDIAILISALVIIGGLLAWVLAAGGN
Ga0307318_100398291	3300028744	Soil	RNGACMGFNATRRYRDKKAVDIALLVAAILIVLGLLAWVFAAGGN
Ga0307320_103059231	3300028771	Soil	GFNATRRYRDKKTVDIALLVAAILIVLALLAWVFAAGGS
Ga0307284_103339952	3300028799	Soil	MGYNVTRRYRDKKSVDVAILIAALLIIGGLLAWVLAAGGH
Ga0307310_101570991	3300028824	Soil	GELTPMGFNATRRYRDKKTVDIAILLAAVVIIGALLTWVLAAGGR
Ga0307312_101293944	3300028828	Soil	MGFNATRRYRGTKWVDIGLLVAALVIIAALLAWVLLG
Ga0307278_1000045421	3300028878	Soil	MGFNATRRYRDKKTVDIAILVAALVIIGGLLAWVLAAGGN
Ga0307278_1000199813	3300028878	Soil	MGFNATRRYRDKKPVDIAILVAAIVIIGGLVAWVLAAGGN
Ga0307277_104980452	3300028881	Soil	MGFNATRRYRDKKTVDIALLVAAILIVIALLAWVFAAGGT
Ga0247826_102444083	3300030336	Soil	MGFNATRRYRDTKWVDIGILVAALVIIAGLLAWVLFG
Ga0268240_101699441	3300030496	Soil	NATRRYRDKKTVDIALLVAAIVIVIALLAWVFAAGGS
Ga0268259_100054721	3300030499	Agave	MGFNATRRYRDKKTVDIALLAAAIVIIVALLAWVFAAGGS
Ga0268259_101832232	3300030499	Agave	MGFNATRRYRDKKTVDIALLVAAIVIIIALLAWVFAAGGS
Ga0308205_10451011	3300030830	Soil	MGFNATRRYRDKKAVDIALLVAAILIVLGLLAWVFAAG
Ga0299913_105846051	3300031229	Soil	VGFNATRRYRGPRTVDIAILVAGIVIIGGLLAWAFAG
Ga0308194_100538281	3300031421	Soil	VGFNATRRYRGKKTVDLAILISAIVIVTVLVGWVFAAGGR
Ga0307405_100395365	3300031731	Rhizosphere	MGFNATRRYRDKKTVDIALLVAAVLIILALLAWVFAAGGS
Ga0307405_100643313	3300031731	Rhizosphere	VGFNATRRYRDKKTVDIALLVAAVAIVIGLLAWVFSAGGS
Ga0307413_108724782	3300031824	Rhizosphere	VGFNATRRYRDKKTVDIALLIAAVLIVLALLAWVFAAGGS
Ga0307406_116324942	3300031901	Rhizosphere	MGFNATRRYRDKKTVDIALLIAAILIVIALLAWVFAAGGT
Ga0307416_1009744292	3300032002	Rhizosphere	NATRRYRDKKTVDIALLVAAILIVVALLAWVFAAGGT
Ga0307416_1028819002	3300032002	Rhizosphere	TRRYRDKKTVDIALLVAAIVIVIALLAWVFAAGGT
Ga0307416_1033882912	3300032002	Rhizosphere	MGFNATRRYRDKKTVDIALLVAAILIVIALLTWVFAAGGN
Ga0268251_100083924	3300032159	Agave	MGFNATRRYRDKKTVDLAILISAIVIVALLVGWVFAAGGR
Ga0268251_101355712	3300032159	Agave	MGFNATRRYRDKKTVDIALLVAAIVIVIALLGWVFAAGGS
Ga0334946_026142_277_399	3300034026	Sub-Biocrust Soil	MGFNATRRYRDKKTADIALLVAAILIVLALLGWVFAAGGS
Ga0334913_008690_2028_2150	3300034172	Sub-Biocrust Soil	VGFNATRRYRDKKTVDIALLVAAIVIVLGLLAWVFAAGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044139

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences