Metagenome / Metatranscriptome Family F044208

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044208
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	54 residues
Representative Sequence	MKKHCIGPVERLRYRWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Number of Associated Samples	127
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.56 %
% of genes near scaffold ends (potentially truncated)	49.03 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.774 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.742 % of family members)
Environment Ontology (ENVO)	Unclassified (37.419 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.968 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF04542	Sigma70_r2	5.81
PF13529	Peptidase_C39_2	4.52
PF00069	Pkinase	3.23
PF02826	2-Hacid_dh_C	1.94
PF07883	Cupin_2	1.29
PF07992	Pyr_redox_2	1.29
PF00027	cNMP_binding	1.29
PF13673	Acetyltransf_10	1.29
PF13414	TPR_11	0.65
PF13091	PLDc_2	0.65
PF08281	Sigma70_r4_2	0.65
PF01797	Y1_Tnp	0.65
PF00583	Acetyltransf_1	0.65
PF01048	PNP_UDP_1	0.65
PF13533	Biotin_lipoyl_2	0.65
PF09154	Alpha-amy_C_pro	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	12.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	5.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	5.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	5.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	5.81
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.65
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.65
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.65
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.77 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.77 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.77 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	91.61 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	91.61 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	25.81 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	6.45 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.81 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	6.45 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.81 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	6.45 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.81 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	6.45 %
Unclassified	root	N/A	3.23 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	25.81 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5.81 %
Unclassified	root	N/A	3.23 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002FZKO4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	502	Open in IMG/M
3300001431\|F14TB_100143795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1013	Open in IMG/M
3300001431\|F14TB_101301486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1066	Open in IMG/M
3300004463\|Ga0063356_101860356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	906	Open in IMG/M
3300004479\|Ga0062595_102388736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300005166\|Ga0066674_10159936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1065	Open in IMG/M
3300005175\|Ga0066673_10404743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300005175\|Ga0066673_10504095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	712	Open in IMG/M
3300005179\|Ga0066684_10077415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1984	Open in IMG/M
3300005179\|Ga0066684_10744577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300005181\|Ga0066678_10148685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1464	Open in IMG/M
3300005187\|Ga0066675_10497949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300005289\|Ga0065704_10760655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300005290\|Ga0065712_10165387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1276	Open in IMG/M
3300005293\|Ga0065715_11053526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	531	Open in IMG/M
3300005365\|Ga0070688_101611991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	530	Open in IMG/M
3300005446\|Ga0066686_10251155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1194	Open in IMG/M
3300005450\|Ga0066682_10719930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	611	Open in IMG/M
3300005451\|Ga0066681_10554678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710	Open in IMG/M
3300005471\|Ga0070698_100420476	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005540\|Ga0066697_10082477	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300005553\|Ga0066695_10269405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1075	Open in IMG/M
3300005554\|Ga0066661_10365720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	882	Open in IMG/M
3300005554\|Ga0066661_10455795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	780	Open in IMG/M
3300005555\|Ga0066692_10415273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	854	Open in IMG/M
3300005556\|Ga0066707_10076715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2006	Open in IMG/M
3300005558\|Ga0066698_11028532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005560\|Ga0066670_10001350	All Organisms → cellular organisms → Bacteria	8339	Open in IMG/M
3300005566\|Ga0066693_10071472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1203	Open in IMG/M
3300005569\|Ga0066705_10555154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300005574\|Ga0066694_10242677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	853	Open in IMG/M
3300005574\|Ga0066694_10397655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	648	Open in IMG/M
3300005586\|Ga0066691_10308461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300005587\|Ga0066654_10361459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005598\|Ga0066706_11492561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	509	Open in IMG/M
3300005764\|Ga0066903_100076691	All Organisms → cellular organisms → Bacteria	4327	Open in IMG/M
3300005764\|Ga0066903_102832349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	941	Open in IMG/M
3300005764\|Ga0066903_104055958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300005844\|Ga0068862_100013906	All Organisms → cellular organisms → Bacteria	6671	Open in IMG/M
3300006032\|Ga0066696_10128686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1557	Open in IMG/M
3300006032\|Ga0066696_10249068	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1147	Open in IMG/M
3300006791\|Ga0066653_10763848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	506	Open in IMG/M
3300006794\|Ga0066658_10491056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	668	Open in IMG/M
3300006796\|Ga0066665_11196308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	580	Open in IMG/M
3300007255\|Ga0099791_10012443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3584	Open in IMG/M
3300007258\|Ga0099793_10396909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300009012\|Ga0066710_102669265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	714	Open in IMG/M
3300009012\|Ga0066710_104492920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	521	Open in IMG/M
3300009137\|Ga0066709_104115627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300010301\|Ga0134070_10385222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300010322\|Ga0134084_10105639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300010323\|Ga0134086_10054823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1358	Open in IMG/M
3300010326\|Ga0134065_10175409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300010361\|Ga0126378_13392136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	506	Open in IMG/M
3300010366\|Ga0126379_10578515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1206	Open in IMG/M
3300010375\|Ga0105239_11844827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	701	Open in IMG/M
3300012198\|Ga0137364_11088822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300012199\|Ga0137383_10007429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7192	Open in IMG/M
3300012199\|Ga0137383_10463445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	928	Open in IMG/M
3300012199\|Ga0137383_11072913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300012200\|Ga0137382_10263896	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1195	Open in IMG/M
3300012200\|Ga0137382_10368884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1008	Open in IMG/M
3300012201\|Ga0137365_10208116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1461	Open in IMG/M
3300012202\|Ga0137363_10426301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1108	Open in IMG/M
3300012206\|Ga0137380_11652367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300012208\|Ga0137376_11178697	Not Available	655	Open in IMG/M
3300012209\|Ga0137379_10577108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300012209\|Ga0137379_11770989	Not Available	513	Open in IMG/M
3300012210\|Ga0137378_10031335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4714	Open in IMG/M
3300012210\|Ga0137378_10045916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3920	Open in IMG/M
3300012210\|Ga0137378_10091387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2784	Open in IMG/M
3300012210\|Ga0137378_10099496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2668	Open in IMG/M
3300012285\|Ga0137370_10332421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	912	Open in IMG/M
3300012285\|Ga0137370_10397882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	834	Open in IMG/M
3300012350\|Ga0137372_10006049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	11751	Open in IMG/M
3300012354\|Ga0137366_10420844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	971	Open in IMG/M
3300012355\|Ga0137369_10000811	All Organisms → cellular organisms → Bacteria	29613	Open in IMG/M
3300012356\|Ga0137371_11374750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	519	Open in IMG/M
3300012357\|Ga0137384_11383776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300012359\|Ga0137385_10035445	All Organisms → cellular organisms → Bacteria	4474	Open in IMG/M
3300012359\|Ga0137385_10627841	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300012361\|Ga0137360_11271413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	636	Open in IMG/M
3300012361\|Ga0137360_11336546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300012362\|Ga0137361_10535755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1075	Open in IMG/M
3300012918\|Ga0137396_10406807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1009	Open in IMG/M
3300012923\|Ga0137359_10193405	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1817	Open in IMG/M
3300012925\|Ga0137419_10182233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1542	Open in IMG/M
3300012927\|Ga0137416_10627097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	939	Open in IMG/M
3300012927\|Ga0137416_10865704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	802	Open in IMG/M
3300012927\|Ga0137416_10958724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300012929\|Ga0137404_10045741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3327	Open in IMG/M
3300012929\|Ga0137404_10181228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1773	Open in IMG/M
3300012930\|Ga0137407_10082995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2705	Open in IMG/M
3300012971\|Ga0126369_10494636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1280	Open in IMG/M
3300012972\|Ga0134077_10584240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300014150\|Ga0134081_10271866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300014157\|Ga0134078_10013814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2431	Open in IMG/M
3300014157\|Ga0134078_10563675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300014166\|Ga0134079_10090605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1151	Open in IMG/M
3300014166\|Ga0134079_10540590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300014745\|Ga0157377_11279892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	572	Open in IMG/M
3300014968\|Ga0157379_10565022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1059	Open in IMG/M
3300015356\|Ga0134073_10025988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1442	Open in IMG/M
3300016387\|Ga0182040_11678579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300016404\|Ga0182037_10091740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2163	Open in IMG/M
3300016445\|Ga0182038_10082982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2270	Open in IMG/M
3300017659\|Ga0134083_10405878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300018028\|Ga0184608_10055649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1570	Open in IMG/M
3300018061\|Ga0184619_10010407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3644	Open in IMG/M
3300018072\|Ga0184635_10068690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1382	Open in IMG/M
3300018431\|Ga0066655_10044487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2253	Open in IMG/M
3300018468\|Ga0066662_11606167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	678	Open in IMG/M
3300018482\|Ga0066669_10199385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1531	Open in IMG/M
3300018482\|Ga0066669_11702823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300019878\|Ga0193715_1002890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3753	Open in IMG/M
3300019887\|Ga0193729_1053834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1628	Open in IMG/M
3300019888\|Ga0193751_1046429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1900	Open in IMG/M
3300020006\|Ga0193735_1022940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1926	Open in IMG/M
3300020010\|Ga0193749_1005412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2463	Open in IMG/M
3300020015\|Ga0193734_1019665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1275	Open in IMG/M
3300020170\|Ga0179594_10000626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	7727	Open in IMG/M
3300020170\|Ga0179594_10258154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	658	Open in IMG/M
3300021418\|Ga0193695_1031816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1131	Open in IMG/M
3300022534\|Ga0224452_1002191	All Organisms → cellular organisms → Bacteria	4564	Open in IMG/M
3300025271\|Ga0207666_1006649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1504	Open in IMG/M
3300025901\|Ga0207688_10740953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300025910\|Ga0207684_11557290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300025930\|Ga0207701_11352994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300025932\|Ga0207690_11297871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	608	Open in IMG/M
3300025936\|Ga0207670_10161170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1674	Open in IMG/M
3300026298\|Ga0209236_1280341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	539	Open in IMG/M
3300026307\|Ga0209469_1120735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300026310\|Ga0209239_1281174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	574	Open in IMG/M
3300026316\|Ga0209155_1169659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300026330\|Ga0209473_1285967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300026331\|Ga0209267_1258075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300026333\|Ga0209158_1100399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1104	Open in IMG/M
3300026374\|Ga0257146_1038093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300026498\|Ga0257156_1075466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300026523\|Ga0209808_1148705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300026550\|Ga0209474_10089569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2094	Open in IMG/M
3300027018\|Ga0208475_1024655	Not Available	592	Open in IMG/M
3300027748\|Ga0209689_1357598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300027882\|Ga0209590_10978395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300028380\|Ga0268265_10659906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1006	Open in IMG/M
3300028536\|Ga0137415_10660752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	857	Open in IMG/M
3300028884\|Ga0307308_10551685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300030844\|Ga0075377_11758038	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	798	Open in IMG/M
3300031122\|Ga0170822_12361999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	811	Open in IMG/M
3300031231\|Ga0170824_108767129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1067	Open in IMG/M
3300031771\|Ga0318546_10593738	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300031910\|Ga0306923_12175129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300032180\|Ga0307471_100230035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1888	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.90%
Host-Associated	Host-Associated	7.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.32%
Plants	Host-Associated → Plants	7.10%
Aquatic	Environmental → Aquatic	2.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.52%
Sediment	Environmental → Aquatic → Sediment	2.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.29%
Loam	Environmental → Terrestrial → Soil → Loam	9.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.10%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.16%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.58%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_08417790	2170459003	Grass Soil	MKKQCIRFVEWLRDTWRSLGRTGGRNHDPLLVNSMASLIFDGRWREL
F14TB_1001437953	3300001431	Soil	MKKRCIRSVERLRYAWRSLVGAVSRKHDRFLVYSMASFNFGGGWRELLLKASVQN
F14TB_1013014862	3300001431	Soil	MNKYPIRLVERIRCTWRLLVRTGGRKHDRFLVYGIVSFNFGGGWRELLLKASLQNT*
Ga0063356_1018603562	3300004463	Arabidopsis Thaliana Rhizosphere	MKKRCIRSIEQLRYTWRSLVRAASRKHDRFLVYSIASFNFGGGWRELLLKASVQNT*
Ga0062595_1023887362	3300004479	Soil	MKKHCIKLVQRLRYNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNNRIQNT*
Ga0066674_101599362	3300005166	Soil	MKKVCIRPFELLRDAWRSLVRASYCNHDPFLVYSMASFNFGGGWRELLLKASPQNT*
Ga0066673_104047431	3300005175	Soil	MNKRRIRPVGRLRYIWGSFARAARRNHDPFLVYSMASFNFGGGWRELLLKASVQNA*
Ga0066673_105040952	3300005175	Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKAENT*
Ga0066684_100774151	3300005179	Soil	EQLRYAWRSLVRAAGRNHDRFLVYSMASFNFGGGWREPLLKAFPQNT*
Ga0066684_107445772	3300005179	Soil	MKTRCIRPVELLRYSWRSLIRSARREHDPFLVYSMASFNFGGGCRELLLKAENT*
Ga0066678_101486853	3300005181	Soil	KTHCVRIGERLGHAWRSLVRAANRNHDPFLVHSMASFNFRGGWRELLLNAENT*
Ga0066675_104979492	3300005187	Soil	MKTHCIRLVERLRHAWRSLVRAANRNHNPFLVYNMASFNFGGGWSELLLKAENT*
Ga0065704_107606551	3300005289	Switchgrass Rhizosphere	CIRLVERLRGTWRSLVGAGSRNHDPFLVYSIASFNFGGGWRELLLKASPQNT*
Ga0065712_101653872	3300005290	Miscanthus Rhizosphere	MNKRRIRPVGRLRYIWGLFARAARRNHDPFLVYSMASFNFGGGWRELLLKASVRNA*
Ga0065715_110535262	3300005293	Miscanthus Rhizosphere	RSIEQLRYTWRSLVRAASRKHDRFPVYSMASFNFGGGWRELLLKASVQNT*
Ga0070688_1016119912	3300005365	Switchgrass Rhizosphere	MKKQCIRFVEWLRDTLRALGRTARRNHDPLLAQSMASFNFDGGWRELL
Ga0066686_102511551	3300005446	Soil	MKKRCIRSIEQLRYTWLSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKAENT*
Ga0066682_107199301	3300005450	Soil	MRKICIRPFELLRYAWRSLVRASYRNHDPFLVYSMASFNFGGGWRELLLKASPQNT*
Ga0066681_105546781	3300005451	Soil	RIRSVGRLRYIWDSLARAAHRKHDPFLVYSIASFNFGGGWRELLLKASVQNA*
Ga0070698_1004204761	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHCIGPVERLRYRWRSLVRAAGRNHDPFLVYSMASFNFGGGWRELLLK
Ga0066697_100824772	3300005540	Soil	MKTRYIRPVELLRYSWRSLIRSARRKHDPFLVYSLASFNFGGGWRELLLKAENT*
Ga0066695_102694052	3300005553	Soil	MKKRCIRSVERLRYTWLSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKAENT*
Ga0066661_103657202	3300005554	Soil	MNKRRIRSVGRLRYIWDSLARAAHRKHDPFLVYSIASFNFGGGWRELLLKASVQNA*
Ga0066661_104557952	3300005554	Soil	MKTHCVRIGERLGHAWRSLVRAANRNHDPFLVHSMASFNFRGGWRELLL
Ga0066692_104152731	3300005555	Soil	MKERCIRQVEQLRYAWRSLVRAGSRNHDPFLVYSMASFNFGGGWRELLLKAFPQ
Ga0066707_100767152	3300005556	Soil	MKERCIRQIEQLRYTWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKAFPQNS*
Ga0066698_110285322	3300005558	Soil	MKKQCIRFIEWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRE
Ga0066670_1000135010	3300005560	Soil	MKERCIRQGEQLRYAWRSLVRAAGRNHDRFLVYSMASFNFGGGWREPLLKAFPQNT*
Ga0066693_100714723	3300005566	Soil	MKKLCISSTERLRYISRSLLSAARRNHDPFLVHSMASFNFGGGWRELLLKAETNERFAI*
Ga0066705_105551542	3300005569	Soil	PVELLRYSWRSLIRSARREHDPFLVYSMASFNFGGGCRELLLKAENT*
Ga0066694_102426771	3300005574	Soil	MKKRCIRSIEQLRYTWLSLVRAASRKHDRFLVHSMASFNFGGGW
Ga0066694_103976553	3300005574	Soil	EQLRYTWRSLVRAGSRNHDPFLVYSMASFNFGGGWRELLLKAFPRNL*
Ga0066691_103084611	3300005586	Soil	MKERCIRQVEQLRYTWRSLVRAGSRNHDPFLVYSMASFNFGGGWR
Ga0066654_103614591	3300005587	Soil	IGPVERLRYGWRSLVRAARRNHDPFLVHSMASFNFGRGWRELLLKAENT*
Ga0066706_114925611	3300005598	Soil	MKKRCIRSAERLRYTWRSLLRAASRNHDPFLVYSMASFNFGGGWRELLLKASP
Ga0066903_1000766914	3300005764	Tropical Forest Soil	MKKHCIKPFERVRYIWRSLVRVTYHNHDPFLVYSMASFNSGGGWKEFLLKASLQNT*
Ga0066903_1004767872	3300005764	Tropical Forest Soil	MKKPCIRSFEFLRHSWQSLFRAARRRHDRFLVYNISSFNFAGGGWSKLLLKASMQKA*
Ga0066903_1028323492	3300005764	Tropical Forest Soil	MKKRGVGPVERLRFGWHSIIRAINRHHDPLLVYSMASFNFGGGWTELLLK
Ga0066903_1040559582	3300005764	Tropical Forest Soil	MKKHCIRPFEVLRYIWRSLVRVTYRNHDPFLVYSIASFNSGGGWKEFLLKASLQNT*
Ga0068862_1000139066	3300005844	Switchgrass Rhizosphere	MKKHCIKLVQRLRFNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNNRIQNT*
Ga0066696_101286863	3300006032	Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFDGGWRELLLKASVQDT*
Ga0066696_102490683	3300006032	Soil	LCISSTERLRYISRSLLSAARRNHDPFLVHSMASFNFGGGWRELLLKAETNERFAI*
Ga0066653_107638482	3300006791	Soil	MKERCIRQVEQLRYAWRSLVRAGSRNHDPFLVYSMASFNFGGGSRELLLKASPQNT*
Ga0066658_104910562	3300006794	Soil	MKKRCIRHVEQLRNAWRSLVRAASRKHDPFLLYSMASFNFGGGWRELLLKAENT*
Ga0066665_111963082	3300006796	Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASVQDT*
Ga0099791_100124434	3300007255	Vadose Zone Soil	MKKTLHHSVKWLRYTWRSLARTGSRNHDPFLVYSMVSFNFGGGARELLLKACPRNA*
Ga0099793_103969091	3300007258	Vadose Zone Soil	MKKTLHHSVKWLRYTWRSLARTGSRNHDPFLVYSMASFNFGGGARELLLKACLRNA*
Ga0066710_1026692652	3300009012	Grasslands Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASVQDT
Ga0066710_1044929202	3300009012	Grasslands Soil	MKKRCIGPVERLRYGWRSLVRAASRNHYPFLVYSMASFNFDGGWRELLLKASVQDT
Ga0066709_1041156272	3300009137	Grasslands Soil	MKKHCVRLVERLHYACQSLVRATRRNHDPFLVDSMASFNFGGCWRELLLKVSPKHMPPR
Ga0134070_103852221	3300010301	Grasslands Soil	KKHCVTTFDWLRYIWRSVIRTATRNHDPFLVYSMASFNFGGGWRDLLLKASPRDA*
Ga0134084_101056391	3300010322	Grasslands Soil	MKERCIRQVEQLRYTWRSLVRAGSRNHDPFLEYSMASFNFDGGWRE
Ga0134086_100548233	3300010323	Grasslands Soil	MKKHCVTTFDWLRYIWRSVVRTATRNHDPFLVYSMASFNFGGGWRDLLLKASPRN
Ga0134065_101754091	3300010326	Grasslands Soil	KRRIRSVGRLRYIWDSLARAAHRKHDPFLVHSIASFNFAGGWRELLLKASVQKA*
Ga0126378_133921361	3300010361	Tropical Forest Soil	MKPRCITPIERVRYGWRLLIRSARRKHDPFLLHSMVSFNFGGGWRELQLKAES
Ga0126379_105785153	3300010366	Tropical Forest Soil	MKKHCIKPFERVRYIWRSLVRVTYHNHDPFLVYSMASFNSGGGWKEFLLKASLQKT*
Ga0105239_118448272	3300010375	Corn Rhizosphere	MKKHCIKLVQRLRYNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNN
Ga0137364_110888221	3300012198	Vadose Zone Soil	MNKRRIRSVGRLRYIWDSLARAAHRKHDPFLVYSMASFNFGGGWRELLLKASIQNA*
Ga0137383_100074293	3300012199	Vadose Zone Soil	MKKRCMRPVERLRSTWRSLVRTAGRKHDPFLVYSMASFNFGGGWRGLLLKASLKNA*
Ga0137383_104634451	3300012199	Vadose Zone Soil	MKKYCIRLVEQLRYAWQSLVRATHPNHDPFLVYSMASFNFDGGWRELLLKA
Ga0137383_110729132	3300012199	Vadose Zone Soil	MKKRCIRSVERLRYTWRSLVRAASRKHDPFLLYSMASFNFGGGWRELLLKAENT*
Ga0137382_102638962	3300012200	Vadose Zone Soil	MNKRRIRPVGRLRYIWDSLARAAHRKHDPFLVYSMASFNFGGGWRELLLKASVQNA*
Ga0137382_103688843	3300012200	Vadose Zone Soil	MKKRFIRSIEQLRYTWRSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKAFPQNS*
Ga0137365_102081163	3300012201	Vadose Zone Soil	MRKVCIRPFELLRYAWRSLVRASYPNHDPFLVYSMASFNFGGGWRELLLK
Ga0137363_104263012	3300012202	Vadose Zone Soil	MEKRCIRPVELLRYSWRSLIRSARRKHDPFLAYSMASFNFGGAWGNFF*
Ga0137380_116523671	3300012206	Vadose Zone Soil	MKERCIRQVEQLRYAWRSLVRAGSRNHDPFLVYSMASFNFDGGWRE
Ga0137376_111786973	3300012208	Vadose Zone Soil	MKKRCIRSVERLRYTWLSLVRAASRKHDRFLVHSMASFNFGGGWRELLLKAKNT*
Ga0137379_105771081	3300012209	Vadose Zone Soil	IRPTERLRYRWRSLVRAASRNHDPFLVHSMASFNFGGGWRELLLKASLQNT*
Ga0137379_117709892	3300012209	Vadose Zone Soil	RCIRHVEQLRYTWRSLVRAASCNHDPFLAYSMASFNFGGGWRELLLKASAQNT*
Ga0137378_100313352	3300012210	Vadose Zone Soil	MNKRRVRPVGWLRYIWDSLARAAHRKHDPFLVYSMASFNFGGGWRELLLKASVQNA*
Ga0137378_100459163	3300012210	Vadose Zone Soil	MKKYCIRLVEQLRYAWQSLVRATHPNHDPFLVYSMASFNFDGGWRELLLKASPQNT*
Ga0137378_100913875	3300012210	Vadose Zone Soil	MKERCIRQVEQLRYAWRSLVRAGSRNHDPFLVYSMASFNFGGGWRELLLKAFPQNS*
Ga0137378_100994965	3300012210	Vadose Zone Soil	MKKRCIRHVEQLRYTWRSLVRAASRNHDPLLVYSMASFNFGGGWRELLLKAENT*
Ga0137370_103324213	3300012285	Vadose Zone Soil	EWLRDTGRSLGRTGRNHDPLLVNSMASFNFEGGWRELLLKTSPK*
Ga0137370_103978823	3300012285	Vadose Zone Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASVQD
Ga0137372_100060499	3300012350	Vadose Zone Soil	MNKRRVRPVGRLRYIWDSLARAAHRKHDPFLVYSMASFNFGGGWRELLLKASVQNA*
Ga0137366_104208442	3300012354	Vadose Zone Soil	MRKIRIRPFELLRYAWRSLVRASYRNHDPFLVYSMASFNFGGGWRE
Ga0137369_1000081110	3300012355	Vadose Zone Soil	MKKRFLRSVERLRRTWQSLVRAAKRNHDPFLVYSMASFNFGGGGRELLLKASLQDT*
Ga0137371_113747502	3300012356	Vadose Zone Soil	MKKQCIRFVEWLRDTWQSLGRTARRNHDPLLAQSMASFNFEGGWRELLLKTSPK
Ga0137384_113837762	3300012357	Vadose Zone Soil	ANMNKRRIRPVGRLRYIWDSLARAAHRKHDPFLVYSMASFNFGGGWRELLLKASVQNA*
Ga0137385_100354451	3300012359	Vadose Zone Soil	MKKYCIRLVERLRYTWQSLVRATRPNHDPFLVYSMASFNFGGGWREL
Ga0137385_106278412	3300012359	Vadose Zone Soil	PVGFTYLSYMKKRCIRHVEQLRNAWRSLVRAASRKHDPFLLYSMASFNFGGGWRELLLKASLQNT*
Ga0137360_112714131	3300012361	Vadose Zone Soil	SVKWLRYTWRSFARPGSRKHDPLLVYSMASFNFGGGARELLLKACPRNA*
Ga0137360_113365461	3300012361	Vadose Zone Soil	AQQLRSIWRSLARAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNM*
Ga0137361_105357553	3300012362	Vadose Zone Soil	ERLRYTWLSLLRAASRKHDRILVHSMASFNFGGGWRELLLKASFQNT*
Ga0137396_104068072	3300012918	Vadose Zone Soil	MKKTLHHSVKWLRCTWRSVARTGSRNHDPFLVYSMASFNFGGGARELLLKACPRNA*
Ga0137359_101934053	3300012923	Vadose Zone Soil	MKKRCIKPVQRLRSSWRSLVKAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT*
Ga0137419_101822334	3300012925	Vadose Zone Soil	MKKTLHHSVKWLRYTWRSVARTGSRNHDPFLVYSMASFNFGGGARELLLKACPRN
Ga0137416_106270973	3300012927	Vadose Zone Soil	MKKTLHHSVKWLRYTWRSVARTGSRNHDPLLVHSMASFNFGGGARELLLKACPRN
Ga0137416_108657042	3300012927	Vadose Zone Soil	MRKVCIRPFELLRDAWRSLVRASYRNHDPFLVYSMASFNFGGGWRELLLKASP
Ga0137416_109587242	3300012927	Vadose Zone Soil	MNKRRIRSVGRLRYIWDSLARAARRKHDPFLVYSIASFNFGGGWRELLLKAS
Ga0137404_100457413	3300012929	Vadose Zone Soil	MKKRCIRSVERLRYTWLSLVRAASRKHDPFLVHSMASFNFGGGWRELLLKASVQNT*
Ga0137404_101812284	3300012929	Vadose Zone Soil	MYLNGMKKHCITPIEWLRDTWRLLLGAASRKHDPFLVYSMASFNFGGGARELLLKASLQDT*
Ga0137407_100829954	3300012930	Vadose Zone Soil	MKKRCIRSVERLRYTWLSLVRAASRKHDRFLVHSMASFNFGGGWRELLLKAENT*
Ga0126369_104946362	3300012971	Tropical Forest Soil	MKPRCITPIERVRYGWRLLIRSARRKHDPFLLHSMVSFNFGGGWRELQLKAESA*
Ga0134077_105842402	3300012972	Grasslands Soil	MKKHCVTTFDWLRYIWRSVVRRATRNHDPFLVYSMASFNFGGGWRDLLLKASPRN
Ga0134081_102718661	3300014150	Grasslands Soil	LLRDAWRSLVRASYCNHDSFLVYSMASFNFGGGWRELLLKASPQNT*
Ga0134078_100138143	3300014157	Grasslands Soil	MKERCIRQVEQLRYTWRSLVRAGSRNHDPFLVYSMASFNFGGGWRELLLKAFPQNT*
Ga0134078_105636752	3300014157	Grasslands Soil	MKKPCIRLVERLRCTCQSLVRGTRANHDPFLLYSMASFNFDGGWRELLLKAS
Ga0134079_100906053	3300014166	Grasslands Soil	MKTHCVRLGERLGHAWRSLVRAANRDHDPFLVHSMASFNFRGGWRELLLNAE
Ga0134079_105405902	3300014166	Grasslands Soil	MNKRRIRSVGRLRYIWDSLARAARRNHDPFLVFSMASFNFGGGWRELLLKASVQNA*
Ga0157377_112798921	3300014745	Miscanthus Rhizosphere	MKKHCIKLVQRLRYNWRSLIRATSRKHDPLLVYNMVSFNFGGGWR
Ga0157379_105650221	3300014968	Switchgrass Rhizosphere	HCIKLVQRLRYNWRSLIRATSRKHDPLLIYSMVSFNFDGGWRELLLNNQVQNT*
Ga0134073_100259881	3300015356	Grasslands Soil	VEQLRYTWRSLVRAGSRNHDPFLEYSMASFNFDGGWRELLLKAFPRNL*
Ga0182040_116785791	3300016387	Soil	MKKVCNRPFQLLRYAWRSLARTSYRNHDPFLVYSMASFNFGGGWRELL
Ga0182037_100917401	3300016404	Soil	MKKRCIGPVEFVRRSWRSFIWATSRNHDPFLVFSMASFNFGGGWRELL
Ga0182038_100829824	3300016445	Soil	MKKRCIGPVEFVRRSWRSFICATSRNHDPFLVFSMASFNFGGGWRELLFKASKQNT
Ga0134083_103364691	3300017659	Grasslands Soil	LLFEESMRKRCIKHFEFLCYIWPSLLRAASRKHDRFLAYNISSFNFGGGGWRQLLLKASMQSA
Ga0134083_104058781	3300017659	Grasslands Soil	MKERCIRQVEQLRYAWRSLVRAGSRNHDPFLVYSMASFNFGGGWMELLLKAFPQNS
Ga0184608_100556493	3300018028	Groundwater Sediment	MKKLYIRCVERLRYTWRLLVRATSRNHDPFLVYSMASFNFGGGWRELLLKASPQ
Ga0184619_100104071	3300018061	Groundwater Sediment	MKKTLHHSTEWLRNTWRSLTRTGSRKHDPFLVYSMVSFNFGGGARELLLKACPRNA
Ga0184635_100686901	3300018072	Groundwater Sediment	MYLNGMKKHCITPVEWLRDTWRLLLGAASRKHDPFLVYSMASFNFGGGWRELLLKASLQT
Ga0066655_100444874	3300018431	Grasslands Soil	MKKRCIRSIEQLRYTWLSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKAENT
Ga0066662_116061672	3300018468	Grasslands Soil	MEKRCIRPVELLRYSWRSLIRSARRKHDPFLAYSMASFNFGGAWRKFLLDASVQ
Ga0066669_101993852	3300018482	Grasslands Soil	MKKRCIGPVERLRYGWRSLVRAARRNHDPFLVHSMASFNFGGGWRELLLKAENT
Ga0066669_117028232	3300018482	Grasslands Soil	MNKRRIRPVGWLRYIWDSLARAAHRKHDPFLVYSIASFNFGGGWRELLLKASVQNA
Ga0193715_10028904	3300019878	Soil	MKRHCIKLVQRLRYNWRSLIRAISRKHDPLLIYSMVSFNFDGGWRELLLNNQVQNT
Ga0193729_10538343	3300019887	Soil	MKKRCIKPVQQLRYTWRSLVRAASRNHDPFLVYSMASFNFGGGWRGLLLKASFQNT
Ga0193751_10464292	3300019888	Soil	MKTRCIKPVQQLRYTWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Ga0193735_10229403	3300020006	Soil	MNKRRIRPVGRLRYIWGWFASAARRNHDPFLVYSMASFNFGGGWRELLLKASVRNA
Ga0193749_10054124	3300020010	Soil	MKKHCIKPVQRLRYRWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Ga0193734_10196653	3300020015	Soil	MKKQCITLFERLCDAWRSLLKAAHRSHDPLLAQSMASFNFGGGWRELKISSRHM
Ga0179594_100006264	3300020170	Vadose Zone Soil	MKKTLHHSVKWLRYTWRSLARTGSRNHDPFLVYSMVSFNFGGGARELLLKACPRNA
Ga0179594_102581542	3300020170	Vadose Zone Soil	MKKRCIRSVERLRYTWLSLVRAASRKHDPFLVHSMASFNFGGGWRELLLKAENT
Ga0193695_10318163	3300021418	Soil	HCIGPVERLRYRWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Ga0224452_10021916	3300022534	Groundwater Sediment	MKKHCVTTFDWLRYIWRSVVRTATRNHDPFLVYSMASFNFGGGWRDLLLKASPRNA
Ga0207666_10066493	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHCIKLVQRLRYNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNNRIQNT
Ga0207688_107409532	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHCIKLVQRLRYNRRSLIRATSRKHDPLLIYSMVSFNFDGGWRELLLNNQVQNT
Ga0207684_115572901	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QLRYTWRSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKASVQNT
Ga0207701_113529942	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRHCIKLVQRLRYNRRSLIRATSRKHDPLLIYSMVSFNFDGGWRELLLNNQVQNT
Ga0207690_112978711	3300025932	Corn Rhizosphere	IKLVQRLRYNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNNRIQNT
Ga0207670_101611702	3300025936	Switchgrass Rhizosphere	MKKHCIKLVQRLRYNWRSLIRATSRKHDPLLIYSMVSFNFDGGWRELLLNNQVQNT
Ga0209236_12803412	3300026298	Grasslands Soil	MRKVCIRPFELLRYAWRSLVRASYCNHDPFLVYSMASFNFGGGWRELLLKASPQN
Ga0209469_11207352	3300026307	Soil	MKERCIRQVEQLRYTWRSLVRAGSRNHDPFLVYSMASFNFGGGWRELLLKAFPQNS
Ga0209239_12811741	3300026310	Grasslands Soil	MKKRCIRSAERLRYTWRSLLRAASRNHDPFLVYSMASFNFGGGWRELLL
Ga0209155_11696592	3300026316	Soil	MNKRRIRPVGRLRYIWGSFARAARRNHDPFLVYSMASFNFGGGWRELLLKAETNERFAI
Ga0209473_12859671	3300026330	Soil	WLHVFERDMKTHCVRIGERLGHAWRSLVRAANRNHDPFLVHSMASFNFRGGWRELLLKAENT
Ga0209267_12580751	3300026331	Soil	MKTHCVRLGERLGHAWRSLVRAANRNHDPFLVHSMASFNFGRGWRELLLKAEN
Ga0209158_11003992	3300026333	Soil	RKVCIRPFELLRYAWRSLVRASYRNHDPFLVYSMASFNFGGGWRELLLKASPQNT
Ga0257146_10380932	3300026374	Soil	MKTRCIKPVQQLRYSWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Ga0257156_10754662	3300026498	Soil	MKKHCIGPVERLRYRWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQNT
Ga0209808_11487052	3300026523	Soil	MNKRRIRSVGRLRYIWDSLARAAHRKHDPFLVHSIASFNFAGGWRELLL
Ga0209474_100895691	3300026550	Soil	MKKRCIGPVERLRYGWRSLVRAASRNHDPFLVYSMASFNFDGGW
Ga0208475_10246552	3300027018	Soil	MKKRCIRSVERLRYTWRSLVGAVSRKHDRFLVYSMASFNFGGGWRELLLKASVQNT
Ga0209689_13575981	3300027748	Soil	MKKRCMRPVERLRSTWRSLVRTAGRKHDPFLVYSMASFNFGGGWRGLLLKASLKNA
Ga0209590_109783952	3300027882	Vadose Zone Soil	MKTRYIKPVQQLRYSWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASFQ
Ga0268265_106599062	3300028380	Switchgrass Rhizosphere	MKKHCIKLVQRLRFNWRSLIRATSRKHDPLLVYNMVSFNFGGGWRELLLNNRIQNT
Ga0137415_106607521	3300028536	Vadose Zone Soil	MRKVCIRPFELLRYAWRSLVRASYRNHDPFLVYSMASFNFGGGWRELLLKASP
Ga0307308_105516852	3300028884	Soil	MKKRGIRSVERLRYTWLSLVRAASRKHDRFLVYSMASFNFGGGWRELLLKASVQNT
Ga0075377_117580382	3300030844	Soil	MKKQCIRFVEWLRGTWRSLGRTGGRNHDPLLVYSMASFNFDGGWREL
Ga0170822_123619991	3300031122	Forest Soil	MKKQCIRFVEWLRDAWRSLGRTGGRNHDPLLVNSMASFNFDGGWRELLLKIS
Ga0170824_1087671292	3300031231	Forest Soil	MKTRCIKPVQQLRYTWRSLVRAASRNHDPFLVYSMASFNFGGGWRELLLKASVQNT
Ga0318546_105937382	3300031771	Soil	MKKRCIGPVEFVRRSWRSFIWATSRNHDPFLVFSMASFNFGGGWRELLFKASKQNT
Ga0306923_121751292	3300031910	Soil	MKRRCIGPVEFLRRSWRSFICATSRNHDPFLVFSMASFNFGGGWRELLFKASKQNT
Ga0307471_1002300352	3300032180	Hardwood Forest Soil	MKKTLHHSVKWLRHTWRSLARTGSRNHDPFLVYSMASFNFGGGWRELLLKACPRNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044208

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences