Metagenome / Metatranscriptome Family F044251

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	48 residues
Representative Sequence	MVATQKVSQGLEEAWNNLYAGYIQGVASTLVLQTLLEDEQRAKCGGVVDGP
Number of Associated Samples	90
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	46.10 %
% of genes from short scaffolds (< 2000 bps)	99.35 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.701 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (65.584 % of family members)
Environment Ontology (ENVO)	Unclassified (90.260 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (87.662 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.43% β-sheet: 0.00% Coil/Unstructured: 45.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF14372	DUF4413	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
All Organisms	root	All Organisms	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
cellular organisms	root	All Organisms → cellular organisms	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.70 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1.30 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005468\|Ga0070707_102305239	Not Available	506	Open in IMG/M
3300005617\|Ga0068859_102277120	Not Available	598	Open in IMG/M
3300005841\|Ga0068863_101632735	Not Available	654	Open in IMG/M
3300009976\|Ga0105128_107602	Not Available	695	Open in IMG/M
3300009980\|Ga0105135_103398	Not Available	956	Open in IMG/M
3300009980\|Ga0105135_107252	Not Available	784	Open in IMG/M
3300009981\|Ga0105133_121387	Not Available	575	Open in IMG/M
3300009990\|Ga0105132_102937	Not Available	1083	Open in IMG/M
3300009990\|Ga0105132_133948	Not Available	556	Open in IMG/M
3300009992\|Ga0105120_1018658	Not Available	750	Open in IMG/M
3300009992\|Ga0105120_1036748	Not Available	595	Open in IMG/M
3300009994\|Ga0105126_1011643	Not Available	851	Open in IMG/M
3300009995\|Ga0105139_1003553	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1587	Open in IMG/M
3300010371\|Ga0134125_12059458	Not Available	621	Open in IMG/M
3300010371\|Ga0134125_12298304	Not Available	586	Open in IMG/M
3300010396\|Ga0134126_11487782	Not Available	747	Open in IMG/M
3300010396\|Ga0134126_11902247	Not Available	651	Open in IMG/M
3300010399\|Ga0134127_11751496	Not Available	697	Open in IMG/M
3300010399\|Ga0134127_12050520	Not Available	650	Open in IMG/M
3300010399\|Ga0134127_13615258	Not Available	507	Open in IMG/M
3300014325\|Ga0163163_12684510	Not Available	555	Open in IMG/M
3300014968\|Ga0157379_12561484	Not Available	510	Open in IMG/M
3300015278\|Ga0182099_1064443	Not Available	524	Open in IMG/M
3300015280\|Ga0182100_1050721	Not Available	636	Open in IMG/M
3300015284\|Ga0182101_1045374	Not Available	659	Open in IMG/M
3300015284\|Ga0182101_1054888	Not Available	619	Open in IMG/M
3300015290\|Ga0182105_1019077	Not Available	886	Open in IMG/M
3300015290\|Ga0182105_1019855	Not Available	874	Open in IMG/M
3300015290\|Ga0182105_1031310	Not Available	763	Open in IMG/M
3300015290\|Ga0182105_1089383	Not Available	540	Open in IMG/M
3300015297\|Ga0182104_1011517	Not Available	1068	Open in IMG/M
3300015297\|Ga0182104_1065597	Not Available	626	Open in IMG/M
3300015297\|Ga0182104_1087404	Not Available	566	Open in IMG/M
3300015306\|Ga0182180_1033852	Not Available	727	Open in IMG/M
3300015309\|Ga0182098_1010701	Not Available	1097	Open in IMG/M
3300015309\|Ga0182098_1113522	Not Available	526	Open in IMG/M
3300015309\|Ga0182098_1126424	Not Available	505	Open in IMG/M
3300015310\|Ga0182162_1098760	Not Available	558	Open in IMG/M
3300015311\|Ga0182182_1015058	Not Available	1003	Open in IMG/M
3300015311\|Ga0182182_1121577	Not Available	504	Open in IMG/M
3300015312\|Ga0182168_1025438	Not Available	914	Open in IMG/M
3300015312\|Ga0182168_1129842	Not Available	514	Open in IMG/M
3300015313\|Ga0182164_1048044	Not Available	743	Open in IMG/M
3300015315\|Ga0182120_1008722	Not Available	1261	Open in IMG/M
3300015315\|Ga0182120_1062023	Not Available	685	Open in IMG/M
3300015316\|Ga0182121_1115771	Not Available	554	Open in IMG/M
3300015316\|Ga0182121_1119056	Not Available	548	Open in IMG/M
3300015317\|Ga0182136_1006793	Not Available	1349	Open in IMG/M
3300015318\|Ga0182181_1068931	Not Available	602	Open in IMG/M
3300015319\|Ga0182130_1062190	Not Available	671	Open in IMG/M
3300015319\|Ga0182130_1075729	Not Available	627	Open in IMG/M
3300015319\|Ga0182130_1133153	Not Available	509	Open in IMG/M
3300015324\|Ga0182134_1085452	Not Available	623	Open in IMG/M
3300015325\|Ga0182148_1046569	Not Available	762	Open in IMG/M
3300015326\|Ga0182166_1049628	Not Available	744	Open in IMG/M
3300015326\|Ga0182166_1050105	Not Available	741	Open in IMG/M
3300015326\|Ga0182166_1064838	Not Available	679	Open in IMG/M
3300015327\|Ga0182114_1073140	Not Available	693	Open in IMG/M
3300015328\|Ga0182153_1035346	Not Available	855	Open in IMG/M
3300015328\|Ga0182153_1116463	Not Available	561	Open in IMG/M
3300015332\|Ga0182117_1018220	Not Available	1154	Open in IMG/M
3300015332\|Ga0182117_1061147	Not Available	764	Open in IMG/M
3300015332\|Ga0182117_1100416	Not Available	630	Open in IMG/M
3300015333\|Ga0182147_1083692	Not Available	671	Open in IMG/M
3300015333\|Ga0182147_1100072	Not Available	625	Open in IMG/M
3300015334\|Ga0182132_1038815	Not Available	887	Open in IMG/M
3300015335\|Ga0182116_1088014	Not Available	682	Open in IMG/M
3300015335\|Ga0182116_1133511	Not Available	574	Open in IMG/M
3300015335\|Ga0182116_1151806	Not Available	543	Open in IMG/M
3300015336\|Ga0182150_1116618	Not Available	582	Open in IMG/M
3300015336\|Ga0182150_1165817	Not Available	503	Open in IMG/M
3300015337\|Ga0182151_1046852	Not Available	813	Open in IMG/M
3300015337\|Ga0182151_1118849	Not Available	577	Open in IMG/M
3300015337\|Ga0182151_1144942	Not Available	533	Open in IMG/M
3300015339\|Ga0182149_1011320	Not Available	1313	Open in IMG/M
3300015339\|Ga0182149_1154646	Not Available	529	Open in IMG/M
3300015340\|Ga0182133_1080708	Not Available	723	Open in IMG/M
3300015340\|Ga0182133_1111363	Not Available	636	Open in IMG/M
3300015340\|Ga0182133_1187297	Not Available	508	Open in IMG/M
3300015348\|Ga0182115_1254676	Not Available	558	Open in IMG/M
3300015349\|Ga0182185_1142381	Not Available	711	Open in IMG/M
3300015349\|Ga0182185_1222539	Not Available	573	Open in IMG/M
3300015349\|Ga0182185_1231156	Not Available	562	Open in IMG/M
3300015349\|Ga0182185_1277242	Not Available	512	Open in IMG/M
3300015350\|Ga0182163_1177268	Not Available	666	Open in IMG/M
3300015350\|Ga0182163_1295637	Not Available	507	Open in IMG/M
3300015352\|Ga0182169_1151303	Not Available	757	Open in IMG/M
3300015352\|Ga0182169_1225332	Not Available	611	Open in IMG/M
3300015352\|Ga0182169_1250467	Not Available	576	Open in IMG/M
3300015352\|Ga0182169_1288549	Not Available	530	Open in IMG/M
3300015353\|Ga0182179_1084495	Not Available	929	Open in IMG/M
3300015354\|Ga0182167_1096442	Not Available	1078	Open in IMG/M
3300015354\|Ga0182167_1280107	Not Available	596	Open in IMG/M
3300015354\|Ga0182167_1287777	Not Available	586	Open in IMG/M
3300015354\|Ga0182167_1308743	Not Available	560	Open in IMG/M
3300015354\|Ga0182167_1337773	Not Available	528	Open in IMG/M
3300017408\|Ga0182197_1054350	Not Available	742	Open in IMG/M
3300017412\|Ga0182199_1027769	Not Available	1036	Open in IMG/M
3300017412\|Ga0182199_1055813	Not Available	821	Open in IMG/M
3300017412\|Ga0182199_1146477	Not Available	575	Open in IMG/M
3300017412\|Ga0182199_1173134	Not Available	538	Open in IMG/M
3300017414\|Ga0182195_1038954	Not Available	964	Open in IMG/M
3300017414\|Ga0182195_1046165	Not Available	911	Open in IMG/M
3300017414\|Ga0182195_1095753	Not Available	702	Open in IMG/M
3300017414\|Ga0182195_1107482	Not Available	672	Open in IMG/M
3300017414\|Ga0182195_1109174	Not Available	669	Open in IMG/M
3300017414\|Ga0182195_1181842	Not Available	546	Open in IMG/M
3300017421\|Ga0182213_1106480	Not Available	779	Open in IMG/M
3300017432\|Ga0182196_1121748	Not Available	549	Open in IMG/M
3300017435\|Ga0182194_1066893	Not Available	686	Open in IMG/M
3300017439\|Ga0182200_1110086	Not Available	580	Open in IMG/M
3300017439\|Ga0182200_1153686	Not Available	515	Open in IMG/M
3300017447\|Ga0182215_1138386	Not Available	558	Open in IMG/M
3300017692\|Ga0182210_1128592	Not Available	556	Open in IMG/M
3300017693\|Ga0182216_1055431	Not Available	863	Open in IMG/M
3300017693\|Ga0182216_1095365	Not Available	706	Open in IMG/M
3300020023\|Ga0182178_1013129	Not Available	609	Open in IMG/M
3300020033\|Ga0182146_105831	Not Available	529	Open in IMG/M
3300020223\|Ga0182118_109775	Not Available	577	Open in IMG/M
3300025315\|Ga0207697_10495925	Not Available	539	Open in IMG/M
3300025961\|Ga0207712_11568646	Not Available	590	Open in IMG/M
3300025972\|Ga0207668_11286841	Not Available	658	Open in IMG/M
3300026088\|Ga0207641_11551996	Not Available	664	Open in IMG/M
3300028049\|Ga0268322_1038151	Not Available	578	Open in IMG/M
3300028049\|Ga0268322_1057471	Not Available	500	Open in IMG/M
3300028054\|Ga0268306_1032886	Not Available	514	Open in IMG/M
3300028056\|Ga0268330_1009983	Not Available	931	Open in IMG/M
3300028058\|Ga0268332_1022719	Not Available	778	Open in IMG/M
3300028058\|Ga0268332_1064190	Not Available	545	Open in IMG/M
3300028064\|Ga0268340_1037696	Not Available	680	Open in IMG/M
3300028139\|Ga0268355_1011826	Not Available	585	Open in IMG/M
3300028144\|Ga0268345_1021050	Not Available	560	Open in IMG/M
3300028251\|Ga0268324_1008101	Not Available	717	Open in IMG/M
3300028464\|Ga0268302_104593	Not Available	624	Open in IMG/M
3300028466\|Ga0268321_103907	Not Available	686	Open in IMG/M
3300028466\|Ga0268321_108191	Not Available	557	Open in IMG/M
3300028467\|Ga0268333_1013664	Not Available	513	Open in IMG/M
3300028468\|Ga0268317_1013552	Not Available	501	Open in IMG/M
3300028470\|Ga0268307_1010319	Not Available	659	Open in IMG/M
3300028471\|Ga0268323_1001691	Not Available	1030	Open in IMG/M
3300028471\|Ga0268323_1018471	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	532	Open in IMG/M
3300028472\|Ga0268315_1015016	Not Available	610	Open in IMG/M
3300028472\|Ga0268315_1022402	Not Available	539	Open in IMG/M
3300028476\|Ga0268329_1013687	Not Available	635	Open in IMG/M
3300028477\|Ga0268309_1010275	Not Available	626	Open in IMG/M
3300028523\|Ga0268313_1013811	Not Available	566	Open in IMG/M
3300028526\|Ga0268339_1016671	Not Available	540	Open in IMG/M
3300028529\|Ga0268311_1002056	Not Available	1125	Open in IMG/M
3300028529\|Ga0268311_1007759	Not Available	760	Open in IMG/M
3300028529\|Ga0268311_1030103	Not Available	501	Open in IMG/M
3300032465\|Ga0214493_1091456	Not Available	724	Open in IMG/M
3300032697\|Ga0214499_1112678	Not Available	837	Open in IMG/M
3300033534\|Ga0314757_1169128	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	94.81%
Environmental	Environmental	5.19%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	94.81%
Terrestrial	Environmental → Terrestrial	5.19%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	83.12%
Unclassified	Host-Associated → Plants → Unclassified	6.49%
Soil	Environmental → Terrestrial → Soil	5.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.95%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	83.12%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	6.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.30%
Loam	Environmental → Terrestrial → Soil → Loam	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	83.12%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	6.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	65.58%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	17.53%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	6.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300009976	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009981	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009992	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015280	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015284	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015290	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015309	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015310	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015315	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015316	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015319	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015332	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015334	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015337	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015349	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017408	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017412	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017432	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017439	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017447	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017692	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300020033	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MG	Host-Associated	Open in IMG/M
3300020223	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_31MAY2016_LD2 MG	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028054	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028056	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028144	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028464	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028466	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028470	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028477	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028529	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032697	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033534	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070707_1023052391	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVATQKVSQESEGTWNNLYADFIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0068859_1022771201	3300005617	Switchgrass Rhizosphere	LEEAWNNLYAGYVQGVASALVLQTLLEDEQRAKCGGVVDGP*
Ga0068863_1016327352	3300005841	Switchgrass Rhizosphere	MVATQKDSQGLEEAWNNLYAGYIQGMTSILVLITLLEDEQRAKFGSVVDDP*
Ga0105128_1076022	3300009976	Switchgrass Associated	MVTTQKISQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0105135_1033982	3300009980	Switchgrass Associated	AQGLEEAWNKKYAGYVQGVASTLVLQTLLEDEQMAKCGGVVDGP*
Ga0105135_1072522	3300009980	Switchgrass Associated	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0105133_1213871	3300009981	Switchgrass Associated	EGTWNNLYAGFIKGDASTLVLQSLLEVEQRAKCGGVVDGY*
Ga0105132_1029372	3300009990	Switchgrass Associated	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGGVVDDP*
Ga0105132_1339481	3300009990	Switchgrass Associated	MVATQKDSQGLEEVWNNLYAGYIKGVASTLVLQTLLEDEQRAKCGGVVDGPSVPNPTVNSCK*
Ga0105120_10186581	3300009992	Switchgrass Associated	MVATQKVSQESEETWNNLYAGYIKGDASNLVVQSLLEDEQRAKCGGVVDGH*
Ga0105120_10367481	3300009992	Switchgrass Associated	SWNNLYASYIQGVTSTLVLTPLLQDEQSTKCGGVVDGP*
Ga0105126_10116432	3300009994	Switchgrass Associated	MVATQKDSQGLEEAWNNLYAGYIQGIASILALITLLEDEQRAKFGSVVDDP*
Ga0105139_10035532	3300009995	Switchgrass Associated	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVVDDP*
Ga0134125_120594581	3300010371	Terrestrial Soil	MVATQKYSHGLEEAWNNLYVGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0134125_122983043	3300010371	Terrestrial Soil	MVATQKVSQESEGTWNNLYADFIKGDASTLVLQSLLEDEQR
Ga0134126_114877822	3300010396	Terrestrial Soil	MVATQKVSQGSEEAWNNLYAGYVQGVATTLVLQTLLEDEQRAMCGGVVDGP*
Ga0134126_119022472	3300010396	Terrestrial Soil	MVATQKVSQELEETWNHLYAGYVQGVASALVLQTLLEDEQRAKCGGVVDGP*
Ga0134127_117514962	3300010399	Terrestrial Soil	SQKLEEAWNNLYAGYVQGVASALVLQTLLEDKQRAKCGGVVDGP*
Ga0134127_120505202	3300010399	Terrestrial Soil	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGH*
Ga0134127_136152581	3300010399	Terrestrial Soil	MVATQKVSQELEGTWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0163163_126845102	3300014325	Switchgrass Rhizosphere	LFHSSITQKSIVATKKVSQEWEETWNNLYAGYIKGDASTLVLQSLLEDEQIAKCGGVVDGP*
Ga0157379_125614841	3300014968	Switchgrass Rhizosphere	TQKVSQELEETWNNLYAGYIKGDASTLVLQSILEDEQRTKCGGVVDGC*
Ga0182099_10644431	3300015278	Switchgrass Phyllosphere	VATQKVSQELEGSWNNLYADFIKGDASTLVLQPLLEDEQRAKCGGVVNGC*
Ga0182100_10507212	3300015280	Switchgrass Phyllosphere	LEEACNNLYAGYIQGVTSTLVLIPLLEDEQRAKCGGLVDGP*
Ga0182101_10453741	3300015284	Switchgrass Phyllosphere	KLEEDWNNLYAGYVEGVASTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182101_10548881	3300015284	Switchgrass Phyllosphere	VATQKVSQKLEETWNNLYAGFIKGDASTLVLQSLLEDERRAKCGGVVDGC*
Ga0182105_10190771	3300015290	Switchgrass Phyllosphere	AWNNLYAGYVQGVATTLILQTLLEDEQRAKCGGVVDGP*
Ga0182105_10198553	3300015290	Switchgrass Phyllosphere	MVATQKDSQGLEEVWNNLYAGYIKGVASSLVLQTLLEDEQRAKCGGVVDDF*
Ga0182105_10313102	3300015290	Switchgrass Phyllosphere	MVATQKVSQGLEETWNNLYVGYVQGVATTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182105_10893831	3300015290	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKEDASTLVLQSLLEDKQKARCGVVVDGC*
Ga0182104_10115172	3300015297	Switchgrass Phyllosphere	MVATQKVSQESEGTWNNLYADFIKGDASTLVLQSLLEDEQRAKCGSVVDGC*
Ga0182104_10655972	3300015297	Switchgrass Phyllosphere	MVATQKVSQGLEEAWNNLYACFFKGVASTLVFATLLEDEQRAKCRGVVDGC*
Ga0182104_10874041	3300015297	Switchgrass Phyllosphere	NLYAGYIQGVASTLVLQTLLEDKRRAKCGGVVDGP*
Ga0182180_10338521	3300015306	Switchgrass Phyllosphere	FHSSITQESIVATQKVSQELEEAWNDLYAGYIKGDASTLVRQPLLEDEQKAKCGGVVDGP
Ga0182098_10107013	3300015309	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYVVYIEGMASILVLITLLEDEQRAKFGGVVDDP*
Ga0182098_11135221	3300015309	Switchgrass Phyllosphere	ATRKFTRLGETWNNLYAGDVQGVASTLVLHPLLEDEQRAKCGGVVDGP*
Ga0182098_11264242	3300015309	Switchgrass Phyllosphere	LEEAWNNLYAGYIKGVASTLVLQTLLEDEQRAKCGGVV
Ga0182162_10987602	3300015310	Switchgrass Phyllosphere	MVDTKKFTSMGKAWNNLYVGFIKGVASTLVLTPLLEDEQRAKCGGVVDGP*
Ga0182182_10150581	3300015311	Switchgrass Phyllosphere	MVGTQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGP*
Ga0182182_11215771	3300015311	Switchgrass Phyllosphere	MVATQKVSQGLEEAWNNLYAGYVQRVPSALVLQTLLEDEQRAKCGCVVDGL*
Ga0182168_10254382	3300015312	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMTSILVLITLLEDEKRAKFGSVVDDP*
Ga0182168_11298421	3300015312	Switchgrass Phyllosphere	FFNYPRSMVATPKYTGQEKAWNNFYAGYIKGVASTVVLQTLLEDEQRAKCGGVVDGP*
Ga0182164_10480442	3300015313	Switchgrass Phyllosphere	VTTQKISQELEETWNNLYAGYIKGDASTVVLQSLLEDEQRAKCGGVVDGC*
Ga0182120_10087222	3300015315	Switchgrass Phyllosphere	MVATKKDSQGLEEAWNNLYAGYIQGMTSILVLITLLEDEQRAKFGSVVDDP*
Ga0182120_10620232	3300015315	Switchgrass Phyllosphere	MVTTQKISQELEETWNNLYAGYIKGDASTVVLQSLLEDEQRAKCGGVVDGC*
Ga0182121_11157711	3300015316	Switchgrass Phyllosphere	SSQKLEETWNNLYAVYVQGVASALVLQTLLEDEQRTKCGGVVDGP*
Ga0182121_11190562	3300015316	Switchgrass Phyllosphere	DKHGRHLKSSQVWEKTWNNLYAGFFKGATSTLVVASLLEDE*
Ga0182136_10067932	3300015317	Switchgrass Phyllosphere	MVATQKVSQELKETWNNLYAGYIKGDASNLVLQSLLEDEQRAKCGGVVDGC*
Ga0182181_10689311	3300015318	Switchgrass Phyllosphere	MVATQKDSQGLEEVWNNLYAGYIKGVASTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182130_10621903	3300015319	Switchgrass Phyllosphere	MIATQKISQELEETWNNLCPGYIKGDASNLVLQSLLEDEQRAKCGGVVNGC*
Ga0182130_10757291	3300015319	Switchgrass Phyllosphere	KAWNNLYGGYIKGVTSTLVLQPLLEDEQSAKCGGVVDGP*
Ga0182130_11331531	3300015319	Switchgrass Phyllosphere	PRKHGSHSKVSQGLEEAWNNLYAGYVQGVASALVLQTLLEDEQRAKCGGVVDGP*
Ga0182134_10854522	3300015324	Switchgrass Phyllosphere	ATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGP*
Ga0182148_10465691	3300015325	Switchgrass Phyllosphere	MVATQKDSQELEETWNNLYAGYIKGDASTVVLQSLLEDEQRAKCGGVVDGP*
Ga0182166_10496282	3300015326	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFVSVVDDP*
Ga0182166_10501051	3300015326	Switchgrass Phyllosphere	LKLEEAWNNLYAGYVQGVATTLVLQTLLEDKQRAKCGGVVDGP*
Ga0182166_10648382	3300015326	Switchgrass Phyllosphere	MVATQKVSQGLEEAWNNLYAGYIQGVASTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182114_10731401	3300015327	Switchgrass Phyllosphere	DLYAGYIKGVASTLVLQPLLEDEQRAKCGGVVDGP*
Ga0182153_10353461	3300015328	Switchgrass Phyllosphere	MVATQKVSQELEGTWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0182153_11164632	3300015328	Switchgrass Phyllosphere	MVATQKFTELEEAWNNLYAGYVQGVATTLVLQTLLEDEQRAKCGGIVDGL*
Ga0182117_10182201	3300015332	Switchgrass Phyllosphere	LEEAWNNLCAGYVQGVATTSVLQTLLKDEQRAKYGGVVDGP
Ga0182117_10611471	3300015332	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSILEDEQRAKCGGVVDGC*
Ga0182117_11004161	3300015332	Switchgrass Phyllosphere	MVATQKDSHGLEEVWNNLYAGYIKGVASTLVLQPLLEDEQRAKCGGI
Ga0182147_10836921	3300015333	Switchgrass Phyllosphere	TQKDSQGLEEAWNNLYAGYIQGIASILALITLLEDEQRAKFGSVVDDP*
Ga0182147_10950161	3300015333	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLE
Ga0182147_11000722	3300015333	Switchgrass Phyllosphere	MVATQKVSQELEGTWNNLYADFIKGDASTLVLQSLLEDKQKARCGVVVDGC*
Ga0182132_10388151	3300015334	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGIASILALITLLKDEQRAKFGSVVDDP*
Ga0182116_10880141	3300015335	Switchgrass Phyllosphere	MVATQKFTELEEAWNNLYAGYVQGVASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0182116_11335113	3300015335	Switchgrass Phyllosphere	MVATQKVSQELEGSWNNLYADFIKGDASTLVLQSLLEDEQR
Ga0182116_11518061	3300015335	Switchgrass Phyllosphere	MVATQKDSQGLEEVWNDLYAGYIKGVASTLVLQPLLEDEQRAKCGGVVDGP*
Ga0182150_11166181	3300015336	Switchgrass Phyllosphere	AWNNLYAGYIKGVASTLVITPLLEDEQRSKCGGVVDGP*
Ga0182150_11658172	3300015336	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSILEDEQR
Ga0182151_10468521	3300015337	Switchgrass Phyllosphere	NNLYVGYIQGVASTLVLTPLLDDKQSTKCGGVVDGP*
Ga0182151_11188491	3300015337	Switchgrass Phyllosphere	ETWNNLYAGYVQGVASALVLQTLLEDEQRAKCGGVVDGP*
Ga0182151_11449421	3300015337	Switchgrass Phyllosphere	MVATQKVSQGLEETWNNLYVGYVQGVATTLVLQTLLEDEQRTKSGGVVDGP*
Ga0182149_10113201	3300015339	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGIASILALITLLEDEQRA
Ga0182149_11546461	3300015339	Switchgrass Phyllosphere	EEAWNNLYAGYVQGVAFALVLQTFLEDEQRAKCEGIVDGP*
Ga0182133_10807081	3300015340	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDKQRAKCGGVVDDP*
Ga0182133_11113632	3300015340	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASNLVLQSLLEDEQRAKCGGVVDGC*
Ga0182133_11872971	3300015340	Switchgrass Phyllosphere	NNLYAGYVQGVATTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182115_12546761	3300015348	Switchgrass Phyllosphere	MEQAWNNLYAGDIHGVASTLVLQTLLKDEERDKCGGVVDGP*
Ga0182185_11423811	3300015349	Switchgrass Phyllosphere	NNLYASSIQGVASALVLQILLEDEQRAKCGGVIDGP*
Ga0182185_12225391	3300015349	Switchgrass Phyllosphere	ITQESMVATQKVSQELEGTWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0182185_12311562	3300015349	Switchgrass Phyllosphere	MVVTPKFTGLEEAWNNFYAGYIKGVASALVLQTLLEDEQRSKCGGVVDSP*
Ga0182185_12772422	3300015349	Switchgrass Phyllosphere	KLEEAWNNLYAGYVQGVATTLVLQTLLEDEQRAKCGGVVDSP*
Ga0182163_11772681	3300015350	Switchgrass Phyllosphere	MVATQKVSQGSEEAWNNLYAAYVQGVASTLVLQTLLEDEQRAKCGSVVDGP*
Ga0182163_12956372	3300015350	Switchgrass Phyllosphere	MVATKKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGH*
Ga0182169_11513031	3300015352	Switchgrass Phyllosphere	NLYAGYVQGVATTLVLQTLLEDEQRAKCGGVVDGP*
Ga0182169_12253322	3300015352	Switchgrass Phyllosphere	MVGTQKVSQELEETWNNLYAGYIKGDASTLVLQSLL
Ga0182169_12504671	3300015352	Switchgrass Phyllosphere	PKFTRLGEVWNNLYAGSNKGVASTLVLQTLLEDEQRAKCRGVVDGC*
Ga0182169_12885491	3300015352	Switchgrass Phyllosphere	NLYASYIQGVTSTLVLMPLLEDEQSTKCGGVVDGP*
Ga0182179_10844951	3300015353	Switchgrass Phyllosphere	ATQKDSQGLEEAWNNLYAGYIQGMTSILVLITLLEDEQRAKFGSVVDDP*
Ga0182167_10964422	3300015354	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYACYVQGMASTLVLTPLLEDEQRANCGGVVDDPYEL*
Ga0182167_12801071	3300015354	Switchgrass Phyllosphere	MVSTKSSQKLEEAWNNLYAGYVQGVATTLALQTLLEDEQRAKCGGIVDGP*
Ga0182167_12877771	3300015354	Switchgrass Phyllosphere	KSSHNLEEAWNNLYAGYIKGVASTLVLQTLLEDEQRAMCGGVVDGP*
Ga0182167_13087431	3300015354	Switchgrass Phyllosphere	TWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC*
Ga0182167_13377732	3300015354	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGFIKGDTSTLVLQSLLEDEQRAKCGGVVDGC*
Ga0182197_10543502	3300017408	Switchgrass Phyllosphere	MVATQKFTELEEAWNNLYAGYVQGVASTLVLPTLLEDEQRAKCGGFVDGP
Ga0182199_10277693	3300017412	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYVVYIEGMASILVLITLLEDEQRAKFGSVVDDP
Ga0182199_10558131	3300017412	Switchgrass Phyllosphere	ETWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0182199_11464771	3300017412	Switchgrass Phyllosphere	LEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGP
Ga0182199_11731342	3300017412	Switchgrass Phyllosphere	WNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0182195_10389541	3300017414	Switchgrass Phyllosphere	EEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVVDDP
Ga0182195_10461651	3300017414	Switchgrass Phyllosphere	KVSQGLEETWNNLYAGYVQGVATTLVLKTLLEDEQRAKCRGVVDGP
Ga0182195_10957531	3300017414	Switchgrass Phyllosphere	TQESMVATQKVSQELEETWNNLYAGYIKEDASTLVLQSLLEDKQKARCGVVVDGC
Ga0182195_11074821	3300017414	Switchgrass Phyllosphere	TWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0182195_11091741	3300017414	Switchgrass Phyllosphere	NNLYASFIKGDASTLVLQSLLKDEQRAKCGGVVDGY
Ga0182195_11818421	3300017414	Switchgrass Phyllosphere	MVATQKVSQGLEEAWNNLYAGYVQGVATTLVLQTLLEDEQRAKCGGVVDGP
Ga0182213_11064802	3300017421	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGIASILALITLLEDEQRAKFGSVVDDP
Ga0182196_11217482	3300017432	Switchgrass Phyllosphere	MVATRKVAQELEGTWNNLYAGFIKGDASTIVLQSLPEDEQRAKCGGVVDG
Ga0182194_10668932	3300017435	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKEDASTLVLQSLLEDKQKARCGVVVDGC
Ga0182200_11100863	3300017439	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASYLVLQSLLEDEQRAKC
Ga0182200_11536861	3300017439	Switchgrass Phyllosphere	AWNNLYAGYIKEVASTFVLTPLLEDEQRAKCGGVVDGP
Ga0182215_11383861	3300017447	Switchgrass Phyllosphere	MVATQKVSQELKETWNNLYAGYIKGDASNLVLQSLLEDEQRAKCGGVVDGC
Ga0182210_11285921	3300017692	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYACYIKGDASTLVLQSLLEDEQRAKCGGVVGGS
Ga0182216_10554311	3300017693	Switchgrass Phyllosphere	MVVTPKFTGLEEAWNNFYAGYIKGVASALVLQTLLEDEQRAKCGGVVDSP
Ga0182216_10953651	3300017693	Switchgrass Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVV
Ga0182178_10131291	3300020023	Switchgrass Phyllosphere	QGLEEAWNNLYADYIQGMTSILVLITLLEDEQRAKFGSVVDDP
Ga0182146_1058311	3300020033	Switchgrass Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0182118_1097752	3300020223	Switchgrass Phyllosphere	PLKSSQKLEEVWNNLYAGHVQGVASTLVLQTLLEDEQRAKCGGVVDGP
Ga0207697_104959252	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MVATQKVSQELEGTWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGP
Ga0207712_115686461	3300025961	Switchgrass Rhizosphere	VLFRSSITQESMVATKKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0207668_112868411	3300025972	Switchgrass Rhizosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVVDDP
Ga0207641_115519961	3300026088	Switchgrass Rhizosphere	MVATQKDSQGLEEAWNNLYAGYIQGMTSILVLITLLEDEQRAKFGSVVDDP
Ga0268322_10381512	3300028049	Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGGVVDDP
Ga0268322_10574711	3300028049	Phyllosphere	MVGTQKVSQELEETWNNLYAGYINGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0268306_10328861	3300028054	Phyllosphere	MVATQKVSQELEGTWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0268330_10099831	3300028056	Phyllosphere	LEEAWNNLYAGYIKGVASTLVLKTLLEDEQRAKCGGVV
Ga0268332_10227191	3300028058	Phyllosphere	MVATQKVSQELEETWNNLYAGFIKGDPSTLVLQSLLEDEQRAKCGGVVDGC
Ga0268332_10641902	3300028058	Phyllosphere	MVATQKVAQGLEEAWNNLYVGYVQGVASTLVLQSLLEDEQRAKCGGVVDGP
Ga0268340_10376962	3300028064	Phyllosphere	LEEAWNNLYAGYIKGVASTLVLQTLLEDEQRAKCGGVVDGPSVPNPTV
Ga0268355_10118262	3300028139	Phyllosphere	MVATQKVAQGLEEAWNNLYAGYVEGMASTLVLQTLLEDEQRAKCGGVVDGL
Ga0268345_10210501	3300028144	Phyllosphere	SFHFSITQESMVATQKVSQGLEEAWNNLYAGYVQGVATTLVRQTLLEDEQRAKCGGVVDG
Ga0268324_10081014	3300028251	Phyllosphere	MVATQKVSQELEETWNNLYAGYINGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0268302_1045931	3300028464	Phyllosphere	MVGTQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0268321_1039071	3300028466	Phyllosphere	SMVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVVDDP
Ga0268321_1081911	3300028466	Phyllosphere	MVATQKVSQGLEEAWNNLYAGYVQGVATTLVLKTLLEDEQRAKCGGVVDGP
Ga0268333_10136641	3300028467	Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGGLVDGP
Ga0268317_10135521	3300028468	Phyllosphere	MVATEKVSQELEGTWNNLYADFIKGDASTLVLQSLLEDEQRAKCGGVVKGC
Ga0268307_10103191	3300028470	Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGMASILVLITLLEDEQRAKFGSVVDD
Ga0268323_10016912	3300028471	Phyllosphere	MVATQKVAQGLEEAWNNLYAGYVQGVASTLVLQTLLEDEQRAKCGSVVEGP
Ga0268323_10184711	3300028471	Phyllosphere	SQGLEEAWNNLYAGYIQGMTSILVLITLLEDEQRAKFGSVVDDP
Ga0268315_10150161	3300028472	Phyllosphere	MVATQKDSQGLEEAWNNLYAGYIQGIASILALITLLEDDQRAKFGSVVDDP
Ga0268315_10224021	3300028472	Phyllosphere	MVSTQKVSQELEGTWNNLNSGYIKGDASTLVLQSLLEDEQIAKCGGVVDGP
Ga0268329_10136872	3300028476	Phyllosphere	MVATQKASQELEETWNNLYAGFIKRDASTLVLQSLLEDEKRAKCGGV
Ga0268309_10102751	3300028477	Phyllosphere	MVATQKVSQELEGTWNNLYADFIKGDASTLVLQSLLEDEQRAKCGG
Ga0268313_10138111	3300028523	Phyllosphere	MVATQKVSQELEETWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGC
Ga0268339_10166711	3300028526	Phyllosphere	MVATQKVSQESEGTWNNLYADFIKGDASTLVLQSLLEDEQRVKCGGVVDGC
Ga0268311_10020561	3300028529	Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDKQRAKCGGVVDDP
Ga0268311_10077592	3300028529	Phyllosphere	MVATQKVAQGLEEAWNNLYVGYVQGVASALVLQTLLEDKQRAKCGGVVDGP
Ga0268311_10301031	3300028529	Phyllosphere	MVATQKVSQELEETWNNLYAGYIKGDASTLVLQSLLEDEQRAKCGVLLT
Ga0214493_10914561	3300032465	Switchgrass Phyllosphere	PLQKFTGLEEAWNNLYAGFIKGDASTLVLQSLLEDEQRAKCGGVVDGP
Ga0214499_11126781	3300032697	Switchgrass Phyllosphere	EETWNNLYAGFIKGDPSTLVLQSLLEDEQRAKCGGIVDGP
Ga0314757_11691282	3300033534	Switchgrass Phyllosphere	MVATQKVSQGLEEAWNNLYAGYVQGVASILLLQTLLEDEQRAKCGGVVDGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences