Metagenome / Metatranscriptome Family F044343

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044343
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	44 residues
Representative Sequence	VSGNFGTVVVCDFEYEVAPGDLPNVLCMVAHVLDENLQHVRTIRLW
Number of Associated Samples	104
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.78 %
% of genes near scaffold ends (potentially truncated)	97.40 %
% of genes from short scaffolds (< 2000 bps)	93.51 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.052 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.221 % of family members)
Environment Ontology (ENVO)	Unclassified (53.896 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.740 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.84% Coil/Unstructured: 62.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00589	Phage_integrase	1.30
PF13356	Arm-DNA-bind_3	0.65
PF14659	Phage_int_SAM_3	0.65
PF07505	DUF5131	0.65
PF04392	ABC_sub_bind	0.65
PF05930	Phage_AlpA	0.65
PF07485	DUF1529	0.65
PF12728	HTH_17	0.65
PF02195	ParBc	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.65
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.65
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.05 %
Unclassified	root	N/A	1.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.05 %
Unclassified	root	N/A	1.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.05 %
Unclassified	root	N/A	1.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.81 %
Unclassified	root	N/A	1.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.86 %
Unclassified	root	N/A	1.95 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	92.21 %
Unclassified	root	N/A	1.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	91.56 %
Unclassified	root	N/A	1.95 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	90.91 %
Unclassified	root	N/A	1.95 %
Asaia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Asaia	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	90.91 %
Unclassified	root	N/A	1.95 %
Asaia bogorensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Asaia → Asaia bogorensis	0.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101126215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	684	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101443193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1123	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104844081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300000956\|JGI10216J12902_114787536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300002076\|JGI24749J21850_1042469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	667	Open in IMG/M
3300002244\|JGI24742J22300_10062189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	688	Open in IMG/M
3300002910\|JGI25615J43890_1028246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	926	Open in IMG/M
3300003505\|JGIcombinedJ51221_10451911	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300004633\|Ga0066395_10496845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	702	Open in IMG/M
3300005332\|Ga0066388_103178778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	839	Open in IMG/M
3300005332\|Ga0066388_108115216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300005345\|Ga0070692_10496704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	790	Open in IMG/M
3300005363\|Ga0008090_14634080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	539	Open in IMG/M
3300005543\|Ga0070672_101945249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	529	Open in IMG/M
3300005764\|Ga0066903_102152327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1075	Open in IMG/M
3300005764\|Ga0066903_103792580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	812	Open in IMG/M
3300005764\|Ga0066903_105105237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300005764\|Ga0066903_106134378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	629	Open in IMG/M
3300005937\|Ga0081455_11006458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	516	Open in IMG/M
3300006034\|Ga0066656_10334581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	978	Open in IMG/M
3300006846\|Ga0075430_100418239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1106	Open in IMG/M
3300006904\|Ga0075424_100257588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300009100\|Ga0075418_12584042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300009101\|Ga0105247_11520957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300009101\|Ga0105247_11877651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	501	Open in IMG/M
3300009156\|Ga0111538_13292084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	562	Open in IMG/M
3300009553\|Ga0105249_10045626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3987	Open in IMG/M
3300009826\|Ga0123355_11048276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	857	Open in IMG/M
3300010044\|Ga0126310_10735399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	752	Open in IMG/M
3300010046\|Ga0126384_10405489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1152	Open in IMG/M
3300010048\|Ga0126373_11043663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	883	Open in IMG/M
3300010048\|Ga0126373_11126565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	851	Open in IMG/M
3300010048\|Ga0126373_11309589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	790	Open in IMG/M
3300010048\|Ga0126373_12400299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	587	Open in IMG/M
3300010154\|Ga0127503_10028653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300010166\|Ga0126306_10400229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1074	Open in IMG/M
3300010358\|Ga0126370_12666440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	501	Open in IMG/M
3300010360\|Ga0126372_10080244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2367	Open in IMG/M
3300010361\|Ga0126378_12245509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	623	Open in IMG/M
3300010366\|Ga0126379_10283847	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1651	Open in IMG/M
3300010376\|Ga0126381_100687064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1463	Open in IMG/M
3300010376\|Ga0126381_101995884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300010376\|Ga0126381_104083613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	567	Open in IMG/M
3300010398\|Ga0126383_12279325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	627	Open in IMG/M
3300010398\|Ga0126383_12660479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	583	Open in IMG/M
3300010863\|Ga0124850_1061179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1163	Open in IMG/M
3300012200\|Ga0137382_10562329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	813	Open in IMG/M
3300012202\|Ga0137363_10660043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	884	Open in IMG/M
3300012361\|Ga0137360_10611634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	933	Open in IMG/M
3300012971\|Ga0126369_11395121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300012971\|Ga0126369_13017159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	551	Open in IMG/M
3300013306\|Ga0163162_10987157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	952	Open in IMG/M
3300016270\|Ga0182036_10140220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1707	Open in IMG/M
3300016270\|Ga0182036_10439462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300016294\|Ga0182041_10147314	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300016294\|Ga0182041_12237272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	511	Open in IMG/M
3300016319\|Ga0182033_10025253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3701	Open in IMG/M
3300016319\|Ga0182033_10637013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	929	Open in IMG/M
3300016319\|Ga0182033_10783029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	839	Open in IMG/M
3300016319\|Ga0182033_10828674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	816	Open in IMG/M
3300016319\|Ga0182033_11064921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	721	Open in IMG/M
3300016319\|Ga0182033_11881483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300016341\|Ga0182035_11981127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	529	Open in IMG/M
3300016357\|Ga0182032_10758362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	818	Open in IMG/M
3300016357\|Ga0182032_11804171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	535	Open in IMG/M
3300016371\|Ga0182034_10038566	Not Available	3059	Open in IMG/M
3300016371\|Ga0182034_10924834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	751	Open in IMG/M
3300016371\|Ga0182034_11417998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300016387\|Ga0182040_10075599	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300016387\|Ga0182040_11544164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300016404\|Ga0182037_10489556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1029	Open in IMG/M
3300016404\|Ga0182037_10724364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	853	Open in IMG/M
3300016422\|Ga0182039_10029109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3526	Open in IMG/M
3300016422\|Ga0182039_10682228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	904	Open in IMG/M
3300016422\|Ga0182039_11794534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	562	Open in IMG/M
3300016445\|Ga0182038_10606986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	945	Open in IMG/M
3300018058\|Ga0187766_11269677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300018469\|Ga0190270_12511359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	577	Open in IMG/M
3300020580\|Ga0210403_11248786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	570	Open in IMG/M
3300021168\|Ga0210406_11066991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	597	Open in IMG/M
3300021181\|Ga0210388_11577220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300021407\|Ga0210383_10157438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1933	Open in IMG/M
3300021478\|Ga0210402_10957674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	783	Open in IMG/M
3300021560\|Ga0126371_10515220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1345	Open in IMG/M
3300021560\|Ga0126371_11372873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	838	Open in IMG/M
3300025906\|Ga0207699_10477626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	897	Open in IMG/M
3300025940\|Ga0207691_11347646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	588	Open in IMG/M
3300025961\|Ga0207712_10929813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	770	Open in IMG/M
3300026551\|Ga0209648_10507187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300027512\|Ga0209179_1145848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	529	Open in IMG/M
3300027783\|Ga0209448_10239030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M
3300027873\|Ga0209814_10141574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1030	Open in IMG/M
3300029636\|Ga0222749_10565423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300031545\|Ga0318541_10575615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	630	Open in IMG/M
3300031546\|Ga0318538_10193138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1086	Open in IMG/M
3300031546\|Ga0318538_10713837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300031561\|Ga0318528_10111319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1443	Open in IMG/M
3300031573\|Ga0310915_10495752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	868	Open in IMG/M
3300031573\|Ga0310915_11060689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300031640\|Ga0318555_10686602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	553	Open in IMG/M
3300031668\|Ga0318542_10437555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300031679\|Ga0318561_10444743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	713	Open in IMG/M
3300031679\|Ga0318561_10540312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	642	Open in IMG/M
3300031708\|Ga0310686_102501729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300031713\|Ga0318496_10800568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	519	Open in IMG/M
3300031719\|Ga0306917_10219026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1448	Open in IMG/M
3300031744\|Ga0306918_10211960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1464	Open in IMG/M
3300031748\|Ga0318492_10780733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	514	Open in IMG/M
3300031751\|Ga0318494_10413317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	783	Open in IMG/M
3300031770\|Ga0318521_10112130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1514	Open in IMG/M
3300031770\|Ga0318521_10308202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	933	Open in IMG/M
3300031772\|Ga0315288_10535430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1146	Open in IMG/M
3300031778\|Ga0318498_10318857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	696	Open in IMG/M
3300031792\|Ga0318529_10376570	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031793\|Ga0318548_10341697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300031797\|Ga0318550_10072981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1582	Open in IMG/M
3300031833\|Ga0310917_10544553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	789	Open in IMG/M
3300031859\|Ga0318527_10329244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300031860\|Ga0318495_10440830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	572	Open in IMG/M
3300031879\|Ga0306919_10331595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1160	Open in IMG/M
3300031879\|Ga0306919_11095339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300031879\|Ga0306919_11361058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300031890\|Ga0306925_11868077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	572	Open in IMG/M
3300031894\|Ga0318522_10412065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300031897\|Ga0318520_10940920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	545	Open in IMG/M
3300031910\|Ga0306923_10197426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Asaia → Asaia bogorensis	2300	Open in IMG/M
3300031912\|Ga0306921_10043189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5095	Open in IMG/M
3300031912\|Ga0306921_11806004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	657	Open in IMG/M
3300031912\|Ga0306921_12039047	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031945\|Ga0310913_10499189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	864	Open in IMG/M
3300031946\|Ga0310910_10525515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	939	Open in IMG/M
3300031946\|Ga0310910_11333567	Not Available	554	Open in IMG/M
3300031946\|Ga0310910_11358835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	548	Open in IMG/M
3300031947\|Ga0310909_10119432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2139	Open in IMG/M
3300031947\|Ga0310909_10836019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	759	Open in IMG/M
3300031954\|Ga0306926_10583610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1366	Open in IMG/M
3300031954\|Ga0306926_11005727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	992	Open in IMG/M
3300031954\|Ga0306926_11557689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	760	Open in IMG/M
3300031954\|Ga0306926_11887810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	675	Open in IMG/M
3300031954\|Ga0306926_12309425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	596	Open in IMG/M
3300032001\|Ga0306922_12035305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	558	Open in IMG/M
3300032059\|Ga0318533_10237901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1312	Open in IMG/M
3300032059\|Ga0318533_10942576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	633	Open in IMG/M
3300032059\|Ga0318533_10982100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300032063\|Ga0318504_10204356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	923	Open in IMG/M
3300032065\|Ga0318513_10422757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300032076\|Ga0306924_11178464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	830	Open in IMG/M
3300032076\|Ga0306924_11281170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	788	Open in IMG/M
3300032091\|Ga0318577_10143459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1135	Open in IMG/M
3300032261\|Ga0306920_100478502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1849	Open in IMG/M
3300032261\|Ga0306920_100788690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1395	Open in IMG/M
3300032261\|Ga0306920_100952587	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300033289\|Ga0310914_11422336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.61%
Host-Associated	Host-Associated	10.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.66%
Plants	Host-Associated → Plants	9.74%
Aquatic	Environmental → Aquatic	1.95%
Arthropoda	Host-Associated → Arthropoda	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.60%
Freshwater	Environmental → Aquatic → Freshwater	1.95%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.87%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.30%
Lake	Environmental → Aquatic → Freshwater → Lake	0.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.30%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.30%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.30%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.30%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.65%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1011262152	3300000364	Soil	VSGNFAQTVVVDFEYEVSDGNLPNPLCMVAHVLDENLRHVRTIRMWR
INPhiseqgaiiFebDRAFT_1014431933	3300000364	Soil	VSDSFHNITVCDFEYEVADGELPNVLCMVAYMLDEKLQHVRTVRMWRGDFSS
INPhiseqgaiiFebDRAFT_1048440812	3300000364	Soil	VGNFTQVVVADFEYEASDGEPPNVLCMVAHLLNERLDHVRTIRVWRGEFGPTPP
JGI10216J12902_1147875362	3300000956	Soil	VSGNFPQVVVADFEYECGEGDLPDVLCMVAHVLDENLRYVRTV
JGI24749J21850_10424691	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQH
JGI24742J22300_100621891	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGN
JGI25615J43890_10282462	3300002910	Grasslands Soil	VTADHHFEQVVVVDFEYEIEDGGLPDVLCMVAHLLNKNLQYLRTIKLWR
JGIcombinedJ51221_104519111	3300003505	Forest Soil	VSENFGSIVVCDFEYDVVAGELPNVLCMVAYVLNEKLQHVRTIRLWRDDFGTTPP
Ga0066395_104968451	3300004633	Tropical Forest Soil	VSENFGTVVACDFEYESAPGELPDVLCTVAHVLDEHLRHVRTI
Ga0066388_1031787782	3300005332	Tropical Forest Soil	VNNFGRIVVADFEYEVRDGELPNVLCMVAHVLDESLQHIDTIRKWR
Ga0066388_1081152162	3300005332	Tropical Forest Soil	MSRNFRTIVVCDFEYEVASGSLPNVLCMVAHVLDEQLEHV
Ga0070692_104967042	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSGGNFDQVVVVDFEFEADAGELPQPLCMVAYVLNENLQHVRTIHLWQGEFGSA
Ga0008090_146340801	3300005363	Tropical Rainforest Soil	VSEHFTQTIVADFEYEIEDGGLPNPLCMVAYVLDEHCRHVRTIR
Ga0070672_1019452491	3300005543	Miscanthus Rhizosphere	MRHFRNVVVCDFEYEVTDGDLPIVLCMVAYILDANLRHVEIVRR*
Ga0066903_1021523271	3300005764	Tropical Forest Soil	VSKNFSSIVVCDFEYEVADGELPNVLCMVAHILDERLRHTRTVRLWRGEFGTAPPF
Ga0066903_1037925802	3300005764	Tropical Forest Soil	VSEHFTQTIVADFEYEIEDGGLPNPLCMVAYVLDEHLRHVRTIR
Ga0066903_1051052371	3300005764	Tropical Forest Soil	VSENFALIVVCDFEYEAPTGDLPNPLCMVAYVLDEGLRHVRTIRLWRGD
Ga0066903_1061343782	3300005764	Tropical Forest Soil	MTENFSLVVVCDFEYEVAPGELPNVLCMVAHVLDENLQHV
Ga0081455_110064581	3300005937	Tabebuia Heterophylla Rhizosphere	VTKNFGTIVVCDFEYEVTSGSLPNVLCMVAHVLDEQLEHVHTVRLWRGDFGSV
Ga0066656_103345813	3300006034	Soil	VSNFTNVVVCDFEYEVADGDLPNVLCMVAHVLDRNLQHVDTIKL
Ga0075430_1004182393	3300006846	Populus Rhizosphere	VSKNFTTIVVCDFEYEIADGELPNVLCMVAYALDEKLQHVRTVKMWRGDFGK
Ga0075424_1002575881	3300006904	Populus Rhizosphere	MSAKFKNIVVCDFEYEVAPGDLPNPLCMVAYVLDENCQHVRTI
Ga0075418_125840422	3300009100	Populus Rhizosphere	VRVFDQVVVLDFEYEIEDGGLPNVLCMVAYVLDQNLQHVCTIRLWRGEFGR
Ga0105247_115209571	3300009101	Switchgrass Rhizosphere	VTDVHCCFRQVVVVDFEYEIENGGLPDVLCMVAYILNANLQHVRTIRLWRGE
Ga0105247_118776511	3300009101	Switchgrass Rhizosphere	MSGGNFDQVVVVDFEFEADAGELPQPLCMVAYVLNENLQHVRTIHLWRGEFGSAP
Ga0111538_132920841	3300009156	Populus Rhizosphere	VSAKFGTIVVGDCEYEIEDGNLPNVLCMVTHVLDENLQ
Ga0105249_100456266	3300009553	Switchgrass Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQHMDTIRLWRGEFGS
Ga0123355_110482761	3300009826	Termite Gut	VSDNFKSVVVCDFEYEVAPGDLPNVLCMVTYVLDENL
Ga0126310_107353991	3300010044	Serpentine Soil	MRQEAFGSVTVVDFEYEVAPGALPSVLCLVADVFNERLEHV
Ga0126384_104054893	3300010046	Tropical Forest Soil	VSGNFSAVVVCDFEYEAAPGELPDVLCMVAHELDENLQHVRTIRLWRG
Ga0126373_110436631	3300010048	Tropical Forest Soil	VSANFSQIVVADFEYEVAEGDLPNVLCMVAYVLDEFLRLVRIIRLWRGEFGSAP
Ga0126373_111265651	3300010048	Tropical Forest Soil	VSNFKTIVVCDFEYEIADGDLPNVLCMVAQELDENLQPLRTIKLWRG
Ga0126373_113095891	3300010048	Tropical Forest Soil	VSGNFTNVVVGDFEYEVTAGDLPNVLCMVVHVLNENLQHVRTIRTWRGEF
Ga0126373_124002991	3300010048	Tropical Forest Soil	VSGSFSTIVVCDFEYEVADGDLPHVLCMVAYVLDENLRHVRTIK
Ga0127503_100286533	3300010154	Soil	VSGHFTTIVVCDFEYEVAGGELPDVLCMVAHVLNANLQHVHTVHKEK
Ga0126306_104002294	3300010166	Serpentine Soil	MKENFASVIACDFEYEIADGDLPNVLCMVAYVLDENLRHVHTARLW
Ga0126370_126664401	3300010358	Tropical Forest Soil	VSENFTQIIVADFEYEVSDGNLPNPLCMVAHVLDENLRHVRTIR
Ga0126372_100802441	3300010360	Tropical Forest Soil	MSRNFGAVVVCDFEYEVQPGNLPDVLCMVAYVLDENLRHVHTIHIWRGD
Ga0126378_122455092	3300010361	Tropical Forest Soil	LSDNFKSVVVCDFEYEVAPGNLPNVLCMVAYVLDENL
Ga0126379_102838471	3300010366	Tropical Forest Soil	VSANFSQIVVADFEYEVAEGDLPNVLCMVAYVLDEFLR
Ga0126381_1006870641	3300010376	Tropical Forest Soil	VSGNFTNVVVGDFEYEVTAGDLPNVLCMVVHVLNENLQHVRTIR
Ga0126381_1019958842	3300010376	Tropical Forest Soil	VSKNFRNIIVCDFEYEIEPGGLPNVLCMVAYVLDEYLRHVRTIRLWR
Ga0126381_1040836132	3300010376	Tropical Forest Soil	VTGYFKNIVIGDFEFEIEPGGLPNVLCMVAYVLDECLQHVRTIRLWRGEFGYAP
Ga0126383_122793252	3300010398	Tropical Forest Soil	VTRFFKNIVVCDFEYEIAPGGLPVPLCMVAYVLDE
Ga0126383_126604793	3300010398	Tropical Forest Soil	VSGNFKNIIVCDFEYEVAAGDLPVPLCMVAYVLDE
Ga0124850_10611793	3300010863	Tropical Forest Soil	MSGTFSQAVVCDAEYETNAPPQREGDLPNVLCMVAHVLNENLQHVCTHRLSRG
Ga0137382_105623291	3300012200	Vadose Zone Soil	MSNFGSIVVCDFEYEVAPGDLPNVLCMVAHVLTENLQHVRTIRLWRGEF
Ga0137363_106600431	3300012202	Vadose Zone Soil	VSENFGTVVACDFEYESAPGELPLVLCTVAHLLDHH
Ga0137360_106116342	3300012361	Vadose Zone Soil	VSEHFTQTIVADFEYEIENGGLPNPLCMVAYVLDEHL
Ga0126369_113951212	3300012971	Tropical Forest Soil	VSETFGTVVVCDFEYESAPGELPDVLCMVAHVLDE
Ga0126369_130171591	3300012971	Tropical Forest Soil	VSGNFTNVVVGDFEYEVNDDGLPEPLCFVADELDEKLRHVRTIRLWRGEF
Ga0163162_109871573	3300013306	Switchgrass Rhizosphere	MSSGNFDQVVVVDFEFEADAGELPQPLCMVAYVLNENLQHV
Ga0182036_101402201	3300016270	Soil	VSEFFREVVVCDFEYEIEDGNLPNPLCMVAHVLDENLRHVRTVRLWRDDFDT
Ga0182036_104394622	3300016270	Soil	MSNFKHIVVCDFEYEIADGNLPDVLCTVAQVLDENFQLLRTIKLWRGEFGAEPPFD
Ga0182041_101473141	3300016294	Soil	VSENFREVVVCDFEYEVAPGDLPDVLCMVAYILDENLRHVRRI
Ga0182041_122372721	3300016294	Soil	VSKNFNTIVVCDFEYEVADGDLPNPLCLVAHVLNENLQHVNTIKL
Ga0182033_100252537	3300016319	Soil	MSNFGTIVVCDFEYEVAPGNLPDVLCMMAHVLDENLQHVRTIRLW
Ga0182033_106370131	3300016319	Soil	MTGNFRSVIVGDFEYEVGSGGLPRPLCFVGEELDEH
Ga0182033_107830291	3300016319	Soil	VSKHFGTIIVCDFEYEITDGDLPNVLCMVAYVLNANLKHVRTIRLWRGD
Ga0182033_108286742	3300016319	Soil	MSENFASVVVCDFEYEAAAGDLPNVLCMVAYELDEKLRHVRTIR
Ga0182033_110649211	3300016319	Soil	MSGNFPNIVVGDFEYEVPDGGLHNVLCGVYYLLDENLQH
Ga0182033_118814831	3300016319	Soil	MSNFKTIVVCDFEYEVADGELPDVLCMVAQVLDENLQPLQTIKQW
Ga0182035_119811272	3300016341	Soil	VSKHFGTIIVCDFEYEITDGDLPNVLCMVAYVLNAN
Ga0182032_107583622	3300016357	Soil	VSNFKSVVAVDFEYEAADGDLPDVLCMVAHVLDENLRHVRT
Ga0182032_118041712	3300016357	Soil	VSNNFHSIVVCDFEYEVAPGDLPNVLCMVAYVLDENLRH
Ga0182034_100385668	3300016371	Soil	MSGNFRQIIVCDFEYECAPGDLPDVLCMVAFVLDGNLQHVRI
Ga0182034_109248342	3300016371	Soil	MHGIFRRLVVIDFEYEVIPAGSLPAVLCMVAYILDEFLQHIK
Ga0182034_114179981	3300016371	Soil	MSGNFRSVVVGDFEYEVAPGDLPNPLCFVAHVLDENLRH
Ga0182040_100755991	3300016387	Soil	LVVIGDFEYEVAPGDLPTPLCFVAHVLDETLQHVHTVRLW
Ga0182040_115441641	3300016387	Soil	VSQSFGQIVVCDFEYEAEAGSLPNVLCMVAHVLDANLQHVRTM
Ga0182037_104895565	3300016404	Soil	VSENFREVVVCDFEYEVTPGDLPNVLCMVAYILDENL
Ga0182037_107243641	3300016404	Soil	VSEFFREVVVCDFEYEIEDGNLPNPLCMVAHVLDEN
Ga0182039_100291091	3300016422	Soil	VSENFGTVVVCDFEYEVAPGDVPHVLCMVAYVLDENLQHVRT
Ga0182039_106822282	3300016422	Soil	MTGNFGSLVVCDFEYEVAPGDLPDVLCMVAYVLNENLHHVR
Ga0182039_117945342	3300016422	Soil	VSENFREVVVCDFEYEVTPGDLPNVLCMVAYILDENLRHVRTIRLWRGDFG
Ga0182038_106069863	3300016445	Soil	VSDYFTQFVVADFEYEVLPGGLPNPLCMVAHVLNE
Ga0187766_112696771	3300018058	Tropical Peatland	VSNFTTIVVCDFEYEVAAGELPNVLCMVAQVLDENLQHLQTIKLWRGEFGHE
Ga0190270_125113591	3300018469	Soil	MSGGNFDQVVVVDFEFEAGAGEIPQPLCMVAYVLNENLQHVRTIHLWRGEFG
Ga0210403_112487862	3300020580	Soil	MSENFGSSVVCDFEYEAADGELPSVLCMVAYVLNENLQHLRT
Ga0210406_110669911	3300021168	Soil	MSENFGSIVVCDFEYEAADGELPSVLCMVAYVLNENLQHLRT
Ga0210388_115772203	3300021181	Soil	VSGHFTTIVVADFEYEIDDNGLPNVLCMVAYVLDSNL
Ga0210383_101574381	3300021407	Soil	VSGHFTTIVVADFEYEIDDNGLPNVLCMVAYVLDSNLRHV
Ga0210402_109576741	3300021478	Soil	VSGNFSQVVVCDFEYEVTEGDLPNPLCMVAHVLDEHLRHVRTIRLWR
Ga0126371_105152203	3300021560	Tropical Forest Soil	VSKNFGTIVVCDFEYEVASGSLPNVLCMVAHVLDEQLEHVHTVRLWRGDFGSVPPF
Ga0126371_113728732	3300021560	Tropical Forest Soil	VSEHFTQTIVADFEYEIEDGGLPNPLCMVAYVLDEHLRHVRTIRLWR
Ga0207699_104776263	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSHFTNVVVCDFEYEVEPGNLPNVLCMVAYVLDENLQHVATSRLWRGEFGK
Ga0207691_113476462	3300025940	Miscanthus Rhizosphere	MRHFRNVVVCDFEYEVTDGDLPIVLCMVAYILDANLRHVEIVRR
Ga0207712_109298131	3300025961	Switchgrass Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQHMDTIRLWRGEFGST
Ga0209648_105071871	3300026551	Grasslands Soil	VSKNFTITNVVDFEYEIEDGGLPNVLSMVTYVLDENLRHVRTIRMWR
Ga0209179_11458481	3300027512	Vadose Zone Soil	VTRRRIFRWTVVCDFEYECAPGGLPSVLSMVAYVLDENLQHVR
Ga0209448_102390302	3300027783	Bog Forest Soil	VSENFVSIVVCDFECEVAPGDLPNVLCMVAHVLDEHLQHV
Ga0209814_101415741	3300027873	Populus Rhizosphere	VSKNFTTIVVCDFEYEIADGELPNVLCMVAYALDEKLQHVRTVKMW
Ga0222749_105654232	3300029636	Soil	VRAIFRTVTVVDFEYEVATGGLPNVLCMVAYVLDAHLQHV
Ga0318541_105756152	3300031545	Soil	VSNFGAIVVCDFEYEVADGELPNVLCMVAHVLDEHLEPGPR
Ga0318538_101931381	3300031546	Soil	MSNFKHIVVCDFEYEIADGNLPDVLCTVAQVLDENFQLLRTIKLWRGEF
Ga0318538_107138371	3300031546	Soil	VSGNFTNVVVGDFEYEITDGDLPNVLCMVAHVLNENLQHVR
Ga0318528_101113191	3300031561	Soil	VSENFASVVACDFEYEVTDGDLPNPLCMVAYVLDENLR
Ga0310915_104957521	3300031573	Soil	MTGNFGSVVICDFEYEIAPGDLPDVLCMVAYVLDENLRRVRTIRL
Ga0310915_110606891	3300031573	Soil	VSGNFAQTVVVDFEYEVSDGNLPNPLCMVAHVLDENLRHVRTIRM
Ga0318555_106866021	3300031640	Soil	VSENFGTVVVCDFEYESAPGELPDVLCMVAHVLDEHLRHVHTIRLWRGEFGST
Ga0318542_104375551	3300031668	Soil	VSDHFTQGAVVDFEYEVSDGNLPNPLCMVAYLLDEHLQHVRTIRM
Ga0318561_104447431	3300031679	Soil	VSGNFAQTVVVDFEYEVSDGNLPNPLCMVAHVLDENLRHV
Ga0318561_105403121	3300031679	Soil	MNENFASVVICDFEYEVEAGDLPNPLCMVTHVLDENLRRVRTVRLWRGE
Ga0310686_1025017291	3300031708	Soil	VSNFRNIAVCDFEYEVADGGLPNVLCMVVYVLDEHLRHVQTIRQWRGEFGR
Ga0318496_108005682	3300031713	Soil	MSNFATVVVCDFEYEVADGELPDVLCMVAHVLDENLRHVRTIK
Ga0306917_102190261	3300031719	Soil	MSNFGTIVVCDFAYEVAPGNLPDVLCMMAHVLDENLQHVRTIRLWRGEFGSIPP
Ga0306918_102119603	3300031744	Soil	VSGNFAQTVVVDFEYEVSDGNLPNPLCMVAHVLDENLRHVRTIRMW
Ga0318492_107807331	3300031748	Soil	VSDHFTQGAVVDFEYEVSDGNLPNPLCMVAYLLDEHLQHV
Ga0318494_104133172	3300031751	Soil	VSKNFGTIVVADFEYEVQPGELPNPLCMVAHVLDENLH
Ga0318521_101121305	3300031770	Soil	MSNFATVVVCDFEYEVADGELPDVLCMVAHVLDENLRHVR
Ga0318521_103082022	3300031770	Soil	VSENFASVVACDFEYEVTDGDLPNPLCMVAYVLDENLRHVRTIRMWRDDFG
Ga0315288_105354302	3300031772	Sediment	MSGNFGTVVVADFEYEVGGGELPNVLCLVAHILDEQLEHVRT
Ga0318498_103188572	3300031778	Soil	VSKNFGTIVVCDFEYEVASGSMPNVLCMVAYVLDEQLEHV
Ga0318529_103765701	3300031792	Soil	VSDNFRSVAVCDFEYEVEPGDLPDVLCMVAYVLDENLRHLRTV
Ga0318548_103416971	3300031793	Soil	VSENFGTVVVCDFEYEVAPGDVPHVLCMVAYVLDENLQHVRTIR
Ga0318550_100729813	3300031797	Soil	VSENFASVVACDFEYEVTDGDLPNPLCMVAYVLDENLRHVR
Ga0310917_105445532	3300031833	Soil	VSGNFTNVVVGDFEYEITDGDLPNVLCMVAHVLNENL
Ga0318527_103292442	3300031859	Soil	MSNFATVVVCDFEYEVADGELPDVLCMVAHVLDENLRHVRTIKLW
Ga0318495_104408301	3300031860	Soil	VSEHFTQTIVADFEYEIENGGLPNPLCMVAYVLDEHLRHVR
Ga0306919_103315951	3300031879	Soil	VSGNFTNVVVGDFEYEITDGDLPNVLCMVAHVLNENLQH
Ga0306919_110953392	3300031879	Soil	VSEHFSQVVVCDFEYEIADGELPNVLCMVAHVLDENLRHVRALRLWRGEFGPAP
Ga0306919_113610582	3300031879	Soil	MSNFKTIVVCDFEYEVADGELPDVLCMVAQVLDENLQPLQTIK
Ga0306925_118680772	3300031890	Soil	VNGNFGTIVVCDFEYEVAPGDLPNPLCMVAHVLDE
Ga0318522_104120652	3300031894	Soil	VSKNFGTVVVCDFEYESAPGELPDVLCLVAHVLDENLRHVRTIRLWRGEFGSTP
Ga0318520_109409201	3300031897	Soil	MSGGNFDQVVVDFEYEAGASDLPQPLCMVAYVLNKNLQHVRTIHLWRAELGS
Ga0306923_101974261	3300031910	Soil	MSGSFRLVVIGDFEYEVAPGDLPNPLCFVAHVLDETLQHVHTVRLWRGEFGSA
Ga0306921_100431899	3300031912	Soil	VSEHFTQTIVADFEYEIENGGLPNPLCMVAYVLDEHLRHVRTIRMW
Ga0306921_118060041	3300031912	Soil	VNGNFGTIVVCDFEYEVAPGDLPNPLCMVAHVLDENLQHVHIIRRWRGE
Ga0306921_120390473	3300031912	Soil	VSGNFGTVVVCDFEYEVAPGDLPNVLCMVAHVLDENLQHVRTIRLW
Ga0310913_104991892	3300031945	Soil	MSGGNFDQVVVDFEYEAGASDLPQPLCMVAYVLNKNLQHVRTIHL
Ga0310910_105255151	3300031946	Soil	MSGNFQSVVVGDFEYEVTPGDLPNPLCFVARVLDGENLRHVRTVRLWR
Ga0310910_113335671	3300031946	Soil	MSGNFRSVVIGDFEYEVAPGDLPNPLCFVAHVLDETLQHVHTVRLW
Ga0310910_113588352	3300031946	Soil	VTENFPAVAVCDFEYEVAAGDLPNVLCMVVHVLDENL
Ga0310909_101194324	3300031947	Soil	VSKNFSPIVVCDFEYEVPAGNLPDVFCMVAHVLDEN
Ga0310909_108360191	3300031947	Soil	MSENFASVVVCDFEYEAAAGDLPNVLCMVAYELDEK
Ga0306926_105836101	3300031954	Soil	VSKNFSPIVVCDFEYEVPAGNLPDVFCMVAHVLDENLR
Ga0306926_110057271	3300031954	Soil	VSKNFTQTIVADFEYEVSDGNLPKPLCMVAHVLDEN
Ga0306926_115576891	3300031954	Soil	VSKNFREVIVYDFEYEVTPGDLPNVVCMVAYVLDENLRH
Ga0306926_118878102	3300031954	Soil	MSGNFQSVVVGDFEYEVTPGDLPNPLCFVARVLDGENLRHVRTV
Ga0306926_123094251	3300031954	Soil	VNGNFTNVVVGDFEYEVTDGDLPSVLCMVAQVLNENLQHVRTIRTWRGEFG
Ga0306922_120353052	3300032001	Soil	VNFGRIVVCDFEYEAESGSLPNVLCMVAYVLDENLQHMRTIRLW
Ga0318533_102379015	3300032059	Soil	VSENFHEVVVCDFEYEVTPGDLPNVLCMVAYVLDENLQQVHTIRLWRGDFSTTP
Ga0318533_109425762	3300032059	Soil	MSENFASVVVCDFEYEAAAGDLPNVLCMVAYELDEKLRHVR
Ga0318533_109821002	3300032059	Soil	VSDNFTNIVVVDFEYEIDDNLLPNVLCMVVYVLDEHLQHVHHHT
Ga0318504_102043562	3300032063	Soil	VSEHFTQTVVADFEYEVSDGNLPNPLCMVAHVLDKNLRHVRT
Ga0318513_104227572	3300032065	Soil	VSENFGTVVVCDFEYESAPSELPDVLCMVAYVLDEHLQHVRTIRLWR
Ga0306924_111784642	3300032076	Soil	VSGNFAQTVVVDFEYEVSDGNLPNPLCMVAHVLDENLRHVRSI
Ga0306924_112811701	3300032076	Soil	VSGNFTNVVVGDFEYEITDGDLPNVLCMVAHVLNENLQHVRTIRTWRGEFGSTPP
Ga0318577_101434593	3300032091	Soil	VSDNFGPIVVCDFEYEVADGDLPNPLCMVAHMLNENLQ
Ga0306920_1004785021	3300032261	Soil	VSNNFANVVVCDFEYEVADGDLPNVLCMVAHVLDHNLRHVRTIKLWRGEFGSTP
Ga0306920_1007886901	3300032261	Soil	VSDNFGPIVVCDFEYEVADGDLPDPLCMVAHVLDEKLRHVRTIRLWR
Ga0306920_1009525873	3300032261	Soil	VSENFREIVVCDFEYEVTPGDLPNVLCMVAYILDENLRHVRT
Ga0310914_101224371	3300033289	Soil	VSENFTGTVVTDFEYEVSDGNLPNPLCMVAHVLDENLRYVRTIRMWRE
Ga0310914_114223362	3300033289	Soil	VSEHFTQTIVADFEYEIENGGLPNPLCMVAYVLDEHLRHV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044343

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences