Metagenome Family F044704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044704
Family Type	Metagenome
Number of Sequences	154
Average Sequence Length	85 residues
Representative Sequence	NLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNNQRPPPSN
Number of Associated Samples	108
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.81 %
% of genes from short scaffolds (< 2000 bps)	87.01 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.740 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.662 % of family members)
Environment Ontology (ENVO)	Unclassified (53.247 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.052 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00248	Aldo_ket_red	15.58
PF07969	Amidohydro_3	9.74
PF04392	ABC_sub_bind	2.60
PF01425	Amidase	1.95
PF13384	HTH_23	1.30
PF13683	rve_3	1.30
PF00144	Beta-lactamase	1.30
PF13586	DDE_Tnp_1_2	0.65
PF03572	Peptidase_S41	0.65
PF13565	HTH_32	0.65
PF00043	GST_C	0.65
PF09834	DUF2061	0.65
PF07536	HWE_HK	0.65
PF14742	GDE_N_bis	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.60
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.30
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.30
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.30
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.65
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.65
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.74 %
Unclassified	root	N/A	40.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.74 %
Unclassified	root	N/A	40.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.74 %
Unclassified	root	N/A	40.26 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.90 %
Unclassified	root	N/A	40.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.30 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.51 %
Unclassified	root	N/A	40.26 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.04 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.04 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10038326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1275	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10074401	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10177415	Not Available	505	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1047474	Not Available	606	Open in IMG/M
3300005332\|Ga0066388_101487339	Not Available	1183	Open in IMG/M
3300005332\|Ga0066388_104943857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300005406\|Ga0070703_10039650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1461	Open in IMG/M
3300005406\|Ga0070703_10473928	Not Available	559	Open in IMG/M
3300005444\|Ga0070694_100434319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1034	Open in IMG/M
3300005471\|Ga0070698_101180689	Not Available	714	Open in IMG/M
3300005555\|Ga0066692_10017972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3529	Open in IMG/M
3300005556\|Ga0066707_10107929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1719	Open in IMG/M
3300005568\|Ga0066703_10701887	Not Available	582	Open in IMG/M
3300005764\|Ga0066903_100703097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300005764\|Ga0066903_105024763	Not Available	701	Open in IMG/M
3300005764\|Ga0066903_105039303	Not Available	700	Open in IMG/M
3300005764\|Ga0066903_108921112	Not Available	508	Open in IMG/M
3300006172\|Ga0075018_10168251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1022	Open in IMG/M
3300006852\|Ga0075433_11948323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006854\|Ga0075425_100173958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2471	Open in IMG/M
3300009088\|Ga0099830_10160418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1736	Open in IMG/M
3300009162\|Ga0075423_11072315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	857	Open in IMG/M
3300010043\|Ga0126380_11720993	Not Available	564	Open in IMG/M
3300010046\|Ga0126384_10220623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1514	Open in IMG/M
3300010046\|Ga0126384_12213519	Not Available	529	Open in IMG/M
3300010048\|Ga0126373_10328559	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300010304\|Ga0134088_10488170	Not Available	606	Open in IMG/M
3300010358\|Ga0126370_10116753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1882	Open in IMG/M
3300010358\|Ga0126370_10656573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300010360\|Ga0126372_10898123	Not Available	888	Open in IMG/M
3300010361\|Ga0126378_12497910	Not Available	590	Open in IMG/M
3300010361\|Ga0126378_12801700	Not Available	557	Open in IMG/M
3300010362\|Ga0126377_10855635	Not Available	970	Open in IMG/M
3300010366\|Ga0126379_10267158	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300010366\|Ga0126379_13210042	Not Available	547	Open in IMG/M
3300010376\|Ga0126381_103839709	Not Available	587	Open in IMG/M
3300010376\|Ga0126381_104449630	Not Available	541	Open in IMG/M
3300010398\|Ga0126383_10558380	Not Available	1211	Open in IMG/M
3300010398\|Ga0126383_10776068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300010398\|Ga0126383_10882611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300010398\|Ga0126383_12098430	Not Available	652	Open in IMG/M
3300010400\|Ga0134122_10595890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1020	Open in IMG/M
3300010868\|Ga0124844_1163039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300012205\|Ga0137362_10944076	Not Available	736	Open in IMG/M
3300012209\|Ga0137379_10637432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	972	Open in IMG/M
3300012210\|Ga0137378_11358263	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012350\|Ga0137372_10559814	Not Available	843	Open in IMG/M
3300012360\|Ga0137375_10922560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300012918\|Ga0137396_10672427	Not Available	764	Open in IMG/M
3300012923\|Ga0137359_10972421	Not Available	729	Open in IMG/M
3300012927\|Ga0137416_10418005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1139	Open in IMG/M
3300012948\|Ga0126375_10659515	Not Available	808	Open in IMG/M
3300012948\|Ga0126375_11598777	Not Available	561	Open in IMG/M
3300012957\|Ga0164303_10152763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300012961\|Ga0164302_10475640	Not Available	875	Open in IMG/M
3300016270\|Ga0182036_10606676	Not Available	878	Open in IMG/M
3300016270\|Ga0182036_11926921	Not Available	501	Open in IMG/M
3300016294\|Ga0182041_12281444	Not Available	506	Open in IMG/M
3300016319\|Ga0182033_11876746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300016341\|Ga0182035_11949905	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300016371\|Ga0182034_10177692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1627	Open in IMG/M
3300016371\|Ga0182034_11775187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300016387\|Ga0182040_10893865	Not Available	736	Open in IMG/M
3300016387\|Ga0182040_11221252	Not Available	633	Open in IMG/M
3300016422\|Ga0182039_10241129	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300016445\|Ga0182038_10933654	Not Available	766	Open in IMG/M
3300021178\|Ga0210408_10288395	Not Available	1308	Open in IMG/M
3300021560\|Ga0126371_10551044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1302	Open in IMG/M
3300021560\|Ga0126371_13912872	Not Available	502	Open in IMG/M
3300025885\|Ga0207653_10059979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300025910\|Ga0207684_11676988	Not Available	513	Open in IMG/M
3300026317\|Ga0209154_1125889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1081	Open in IMG/M
3300026328\|Ga0209802_1042831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2292	Open in IMG/M
3300026557\|Ga0179587_11016546	Not Available	546	Open in IMG/M
3300027371\|Ga0209418_1027296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	977	Open in IMG/M
3300027576\|Ga0209003_1004233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1900	Open in IMG/M
3300027862\|Ga0209701_10493143	Not Available	667	Open in IMG/M
3300028047\|Ga0209526_10143382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1674	Open in IMG/M
3300028536\|Ga0137415_10197123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1834	Open in IMG/M
3300031543\|Ga0318516_10059230	All Organisms → cellular organisms → Bacteria → Proteobacteria	2102	Open in IMG/M
3300031543\|Ga0318516_10107900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1578	Open in IMG/M
3300031543\|Ga0318516_10512821	Not Available	688	Open in IMG/M
3300031561\|Ga0318528_10063902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1885	Open in IMG/M
3300031561\|Ga0318528_10409597	Not Available	728	Open in IMG/M
3300031564\|Ga0318573_10161077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1180	Open in IMG/M
3300031564\|Ga0318573_10339839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031572\|Ga0318515_10139201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1290	Open in IMG/M
3300031573\|Ga0310915_10024174	All Organisms → cellular organisms → Bacteria → Proteobacteria	3729	Open in IMG/M
3300031573\|Ga0310915_10118073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300031573\|Ga0310915_10215030	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300031668\|Ga0318542_10013691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3158	Open in IMG/M
3300031679\|Ga0318561_10056277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1983	Open in IMG/M
3300031681\|Ga0318572_10699190	Not Available	604	Open in IMG/M
3300031682\|Ga0318560_10319421	Not Available	837	Open in IMG/M
3300031719\|Ga0306917_10093708	All Organisms → cellular organisms → Bacteria → Proteobacteria	2139	Open in IMG/M
3300031719\|Ga0306917_10286128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300031724\|Ga0318500_10175370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300031724\|Ga0318500_10286877	Not Available	804	Open in IMG/M
3300031736\|Ga0318501_10417145	Not Available	726	Open in IMG/M
3300031744\|Ga0306918_10406381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1061	Open in IMG/M
3300031744\|Ga0306918_10657647	Not Available	820	Open in IMG/M
3300031765\|Ga0318554_10221398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1077	Open in IMG/M
3300031768\|Ga0318509_10428671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300031770\|Ga0318521_10092564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1650	Open in IMG/M
3300031771\|Ga0318546_10496224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300031771\|Ga0318546_10503454	Not Available	850	Open in IMG/M
3300031780\|Ga0318508_1006968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2424	Open in IMG/M
3300031781\|Ga0318547_10070356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1937	Open in IMG/M
3300031782\|Ga0318552_10388402	Not Available	711	Open in IMG/M
3300031792\|Ga0318529_10033328	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300031795\|Ga0318557_10065287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1561	Open in IMG/M
3300031797\|Ga0318550_10025311	All Organisms → cellular organisms → Bacteria → Proteobacteria	2510	Open in IMG/M
3300031805\|Ga0318497_10091023	All Organisms → cellular organisms → Bacteria → Proteobacteria	1627	Open in IMG/M
3300031835\|Ga0318517_10155757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300031835\|Ga0318517_10162419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300031845\|Ga0318511_10032810	All Organisms → cellular organisms → Bacteria → Proteobacteria	1996	Open in IMG/M
3300031845\|Ga0318511_10430920	Not Available	606	Open in IMG/M
3300031846\|Ga0318512_10649732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300031879\|Ga0306919_10049236	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300031879\|Ga0306919_10155222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300031879\|Ga0306919_10327702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300031890\|Ga0306925_10489108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1312	Open in IMG/M
3300031890\|Ga0306925_10566378	Not Available	1203	Open in IMG/M
3300031890\|Ga0306925_10810721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300031893\|Ga0318536_10033199	All Organisms → cellular organisms → Bacteria → Proteobacteria	2429	Open in IMG/M
3300031896\|Ga0318551_10051228	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300031941\|Ga0310912_10182820	All Organisms → cellular organisms → Bacteria → Proteobacteria	1597	Open in IMG/M
3300031942\|Ga0310916_10143781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1962	Open in IMG/M
3300031945\|Ga0310913_10139210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1670	Open in IMG/M
3300032001\|Ga0306922_11275474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300032035\|Ga0310911_10087685	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300032035\|Ga0310911_10416103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300032042\|Ga0318545_10035518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1651	Open in IMG/M
3300032051\|Ga0318532_10278296	Not Available	594	Open in IMG/M
3300032059\|Ga0318533_10314567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1137	Open in IMG/M
3300032059\|Ga0318533_10428275	Not Available	967	Open in IMG/M
3300032059\|Ga0318533_10541585	Not Available	853	Open in IMG/M
3300032063\|Ga0318504_10346792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300032065\|Ga0318513_10579408	Not Available	549	Open in IMG/M
3300032076\|Ga0306924_10360392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300032076\|Ga0306924_10524081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1347	Open in IMG/M
3300032091\|Ga0318577_10333415	Not Available	725	Open in IMG/M
3300032094\|Ga0318540_10055473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1788	Open in IMG/M
3300032094\|Ga0318540_10064146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1675	Open in IMG/M
3300032261\|Ga0306920_100343209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2222	Open in IMG/M
3300033289\|Ga0310914_10394425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1252	Open in IMG/M
3300033289\|Ga0310914_10482133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1122	Open in IMG/M
3300033290\|Ga0318519_10365295	Not Available	855	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.05%
Host-Associated	Host-Associated	1.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.40%
Plants	Host-Associated → Plants	1.95%
Aquatic	Environmental → Aquatic	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.95%
Sediment	Environmental → Aquatic → Sediment	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.01%
Loam	Environmental → Terrestrial → Soil → Loam	10.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.30%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100383261	3300000597	Forest Soil	RDRAKQKHAGLAKSVEAYLARMGMPKRLFQEIRQQPSERVLFLDAQRLKALGLNGTDPAYEQWLRANNYQQPLQSD*
AF_2010_repII_A1DRAFT_100744011	3300000597	Forest Soil	ANQKNTGVAKRVETYLARMGMPKKLFQEIAAQQSSDKVRLLNAGQLKTLGLDGTDPAYERWMRENNVEPPQSK*
AF_2010_repII_A1DRAFT_101774151	3300000597	Forest Soil	RVPTPENVGLQRMNLDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSTKVRLLDASKLKTLGLDGTDPVYEQWLRENNNQRPAPSN*
AP72_2010_repI_A100DRAFT_10474742	3300000837	Forest Soil	CVLVLAAGVRRTPTPQVVGLQRMNFAQKELPSATPDRAKQNYTGLAKKVETYLARMGMPKKLFQEIAAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN*
Ga0066388_1014873391	3300005332	Tropical Forest Soil	ASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAARLKSLGLDGIDPAYEQWLRENNNQQPPPSN*
Ga0066388_1049438571	3300005332	Tropical Forest Soil	AKQTHAGLAKSVETYLARMGMPKRLFQEIRQQSSDKVLLLDARRLKALGLDGTDPAYEQWLRANENQERSRSN*
Ga0070703_100396501	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0070703_104739281	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ENVGLQRMNFDQKEFVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0070694_1004343191	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0070698_1011806891	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0066692_100179721	3300005555	Soil	TPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0066707_101079293	3300005556	Soil	MNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0066703_105117892	3300005568	Soil	AALAKSVESYLARMGMPKKLYQEIKSSERVLFLDARRLKALGLDGTDPAYEEWLRENNYQQPPQSN*
Ga0066703_107018872	3300005568	Soil	LSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0066903_1007030971	3300005764	Tropical Forest Soil	DKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN*
Ga0066903_1050247632	3300005764	Tropical Forest Soil	SDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENDNRRPPPAN*
Ga0066903_1050393032	3300005764	Tropical Forest Soil	PSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNNQRPAPSN*
Ga0066903_1089211121	3300005764	Tropical Forest Soil	TPENVGLQRMNFDQKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGTDPAYEQWLRENNNQQPPQSN*
Ga0075018_101682513	3300006172	Watersheds	VGLQRMNFDQKELVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMNQQSSERVLLLDARRLKALGLDGTDPAYEQWLRANNDQQPPQSN*
Ga0075433_119483231	3300006852	Populus Rhizosphere	ASVSPDRAKQKYTGLAKKVETYLARMGMPKKLFQEIAAQQSSDKVRLLDSARLKALGLDGIDPAYEQWLRANDHQERSHLN*
Ga0075425_1001739584	3300006854	Populus Rhizosphere	RRTPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0099830_101604181	3300009088	Vadose Zone Soil	DKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNGQRPPPSN*
Ga0066709_1001630506	3300009137	Grasslands Soil	ELASTSGDRTKQKSAALAKSVESYLARMGMPKKLYQEIKSSERVLFLDARRLKALGLDGTDPAYEEWLRENNYQQPPQSN*
Ga0075423_110723152	3300009162	Populus Rhizosphere	ISRDRTKQKHAGLAKSVQAYLARMGMPKRLFQEMQSSERVLLLDARRLKALGLDGTDPAYEQWLRANNYQQPPKSD*
Ga0126380_117209931	3300010043	Tropical Forest Soil	KRIETYLARMGMPKKLFQEMAVQQASAKVRLLDAAKLKTLGLDGTDPAYEQWLRENNNQRPAPPN*
Ga0126384_102206233	3300010046	Tropical Forest Soil	VASLPSDKSKQKYAGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNNQQPPPSH*
Ga0126384_122135191	3300010046	Tropical Forest Soil	KSKQKYAGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENSNQQPPPSN*
Ga0126373_103285592	3300010048	Tropical Forest Soil	GACVLVLAAGVRRTPAPENVGLQRMNFDQKELVANLSPDKAKQKYTGVAKRVETYFARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDLGL*
Ga0134088_104881702	3300010304	Grasslands Soil	LQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAHQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0126370_101167534	3300010358	Tropical Forest Soil	GVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN*
Ga0126370_106565731	3300010358	Tropical Forest Soil	GVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN*
Ga0126372_108981232	3300010360	Tropical Forest Soil	VGLQRMNFDQKEFVASLPSDKAKQKYAGVAKRVETYLARMGMPKKLFQEMTAQQASTKVHLLDAARLKTLGLDGTDPAYEKWLRENNNQQPPPSN*
Ga0126378_108327471	3300010361	Tropical Forest Soil	LNFAQSRDRAKQKHVGLAKSVEAYLARMGMPKRLFQEIRQQSSGKVLLLDARRLKALGLDGTDPAYEQWLRANNYQQPPQSD*
Ga0126378_124979102	3300010361	Tropical Forest Soil	DKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSTKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN*
Ga0126378_128017001	3300010361	Tropical Forest Soil	SDKAKQKYTGVAKRVETYLARMGMPKKLFQEMTAQQASTKVHLLDAARLKTLGLDGTDPAYEKWLRENNNQQPPPSN*
Ga0126377_108556352	3300010362	Tropical Forest Soil	AAGVRRIPTPENVGLQRMNFDQKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNNQQPPPSN*
Ga0126379_102671581	3300010366	Tropical Forest Soil	KNTGVAKRVETYLARMGMPKKLFQEIAAQQSSNKVRLLNAGQLKTLGLDGTDPAYERWMRENNVEPPQSK*
Ga0126379_132100421	3300010366	Tropical Forest Soil	PENVGLQRMNFDQKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSTKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN*
Ga0126381_1038397092	3300010376	Tropical Forest Soil	SLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSTKVRLLDASKLKTLGLDGTDPVYEQWLRENNNQRPAPSN*
Ga0126381_1044496301	3300010376	Tropical Forest Soil	KYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYQQWLRENNNQQPPQSN*
Ga0126383_105583801	3300010398	Tropical Forest Soil	KEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENSNQQPPPSN*
Ga0126383_107760682	3300010398	Tropical Forest Soil	EQTRDRAKQKHAGLAKSVEAYLARMGMPKRLFQEIRQQSSERVLLLDAQRLKALGLNGTDPAYEQWLRANNYQQPLQSD*
Ga0126383_108826111	3300010398	Tropical Forest Soil	KYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWQRDNNNQQPPQSN*
Ga0126383_120984301	3300010398	Tropical Forest Soil	QRMNFDQKELVASPPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMTAQQASTKVHLLDAARLKTLGLDGTDPAYEKWLRENNNQQPPPSN*
Ga0134122_105958901	3300010400	Terrestrial Soil	GESISRDRAKQKKAGSAKVVQVYLARMGMPKRLFQEMQSSERVLLLDARRLKALGLDGTDPAYEQWLRANNYQQPPKSD*
Ga0124844_11630391	3300010868	Tropical Forest Soil	RDRAKQKHAGLAKSVEAYLARMGMPKRLFQEIRQQSSERVLLLDAQRLKALGLNGTDPAYEQWLRANNYQQPLQSD*
Ga0137364_103280151	3300012198	Vadose Zone Soil	GDRTKQKSAALAKSVESYLARMGMPKKLYQEIKSSERVLFLDARRLKALGLDGTDPAYEEWLRENNYQQPPQSN*
Ga0137362_109440761	3300012205	Vadose Zone Soil	ENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0137379_106374323	3300012209	Vadose Zone Soil	QKEFASMSRDRAKQKYTALAKRVEIYLARMGMPKKLFQEMTQQSSDKVRLLDAGRLKTLGLDGTDPAYEQWMRANNYQQPPPSN*
Ga0137378_113582632	3300012210	Vadose Zone Soil	KKVETYLARMGMPKKLFQEMTAQQSSDKVRLLDAGRLKTLGLDGTDPAYEQWMRANNNQEPPRSN*
Ga0137372_105598142	3300012350	Vadose Zone Soil	MDFAQKDSASVSPDRAKQKYTGLAKKVETYLARMGMPKKLFREIAAQQSSDKVRLLDSARLKALGLDGIDPAYEQWLRANDNQERSHSN*
Ga0137375_109225602	3300012360	Vadose Zone Soil	AQKDSASVSPDRAKQKYTGLAKKVETYLARMGMPKKLFQEIAAQQSSDKVRLLDSARLKALGLDGIDPAYEQWLRANNNQERSHSN*
Ga0137396_106724271	3300012918	Vadose Zone Soil	TPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPAPSN*
Ga0137359_109724211	3300012923	Vadose Zone Soil	AGVRRTPAPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNGQRPPPSN*
Ga0137416_104180051	3300012927	Vadose Zone Soil	VLVLAAGVRRTPTPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPAPSN*
Ga0126375_106595151	3300012948	Tropical Forest Soil	DQKEFVASLPSDKAKQKYTGVAKRIETYLARMGMPKKLFQEMAAQQASAKVRLLDAAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE*
Ga0126375_115987771	3300012948	Tropical Forest Soil	ENVGLQHMNFDQKELVASPPSGKAKQKYTGVAKRVETYLARMGMPKKLFQEMTAQQASTKVHLLDAARLKTLGLDGTDPAYEKWLRENNNQQPPPSN*
Ga0164303_101527631	3300012957	Soil	RMNFDQKEFGANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN*
Ga0164302_104756402	3300012961	Soil	RRTPAPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPAPSN*
Ga0182036_106066761	3300016270	Soil	VLVLAAGVRRIPTPENVGLQRMNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0182036_119269211	3300016270	Soil	DKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRVLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0182041_122814441	3300016294	Soil	ENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSTKVRLLDAAKLKTLGLDGTDPAYEQWLRENDNQRPPPAN
Ga0182033_118767461	3300016319	Soil	YIGVAKRVETYLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0182035_119499052	3300016341	Soil	VAKRVETYLARMGMPKKLFQEMSAQQSSAKVRPLDAAKLKSLGLDGIDPAYEQWLRENNNQQPPPSN
Ga0182034_101776921	3300016371	Soil	YTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0182034_117751871	3300016371	Soil	KTKQKYTGVAKRIETCLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0182040_108938651	3300016387	Soil	AKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRRLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0182040_112212521	3300016387	Soil	QRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0182039_102411291	3300016422	Soil	EFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0182038_109336541	3300016445	Soil	PAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0210408_102883951	3300021178	Soil	SPDKAKQKYTGVAKRVETYLTRMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNTQRPPPSN
Ga0126371_105510443	3300021560	Tropical Forest Soil	KAKQKYTGVAKRVETYLARMGMPKKLFQEMTAQQASTKVHLLDAARLKTLGLDGTDPAYEKWLRENNNQQPPPSN
Ga0126371_139128721	3300021560	Tropical Forest Soil	PSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0207653_100599793	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RRTPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0207684_116769881	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVHLLDAAKLKSLGLDGTDPAYEQWLRENSNQQPPPSN
Ga0209154_11258891	3300026317	Soil	NVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0209802_10428313	3300026328	Soil	YGACVLVLAAGVRRTPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0179587_110165462	3300026557	Vadose Zone Soil	ANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNGQRPPPSN
Ga0209418_10272963	3300027371	Forest Soil	LSPDKAKQRYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDASKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0209003_10042331	3300027576	Forest Soil	QKELVANVSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0209701_104931431	3300027862	Vadose Zone Soil	QKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNGQRPPPSN
Ga0209526_101433821	3300028047	Forest Soil	VANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSSKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0137415_101971231	3300028536	Vadose Zone Soil	VLVLAAGVRRTPTPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPAPSN
Ga0318516_100592305	3300031543	Soil	GVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0318516_101079004	3300031543	Soil	QKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318516_105128212	3300031543	Soil	DKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0318528_100639022	3300031561	Soil	GVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318528_104095971	3300031561	Soil	AAGVRRTPVPENVGLQRMNFDQKELVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0318573_101610772	3300031564	Soil	TGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318573_103398391	3300031564	Soil	IGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318515_101392011	3300031572	Soil	KQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0310915_100241744	3300031573	Soil	YTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0310915_101180734	3300031573	Soil	YTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0310915_102150301	3300031573	Soil	KQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318542_100136911	3300031668	Soil	QKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRVLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0318561_100562775	3300031679	Soil	LKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318572_106991901	3300031681	Soil	PTPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318560_103194212	3300031682	Soil	LSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318560_106985911	3300031682	Soil	CFGACVLVLAAGVRRTPTPQNVGLQRMNFAQKELPSATPDRVKQNHTGLAKKVETYLARLGMPKRLFQEITAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0306917_100937085	3300031719	Soil	LVLAAGVRRIPTPENVGLQRMNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0306917_102861283	3300031719	Soil	PDRVKQNHTGLAKKVETYLARMGMPKRLFQEITAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0318500_101753701	3300031724	Soil	SDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0318500_102868772	3300031724	Soil	MNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318501_104171452	3300031736	Soil	SPLFPDFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0306918_104063811	3300031744	Soil	QKEFVASLLSDKAKQKYTGVAKRIETCLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0306918_106576472	3300031744	Soil	LVLAAGVRRIPTPENVGLQRMNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318554_102213982	3300031765	Soil	LAAGVWRIPTPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318509_104286712	3300031768	Soil	VETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318521_100925644	3300031770	Soil	FVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0318546_104962241	3300031771	Soil	VKQNHPGLAKKVETYLARMGMPKRLFQEITAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0318546_105034542	3300031771	Soil	LQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318508_10069684	3300031780	Soil	AKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318547_100703561	3300031781	Soil	VGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318552_103884021	3300031782	Soil	LSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318529_100333282	3300031792	Soil	AAGVWRIPTPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318557_100652871	3300031795	Soil	SDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318550_100253113	3300031797	Soil	VLVLAAGVRRIPTPENVGLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318497_100910234	3300031805	Soil	CVLVLAAGVRRIPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318517_101557571	3300031835	Soil	LSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0318517_101624191	3300031835	Soil	AAGVRRIPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318511_100328101	3300031845	Soil	KYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318511_104309202	3300031845	Soil	RIPTPENVGLQRMNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0318512_106497321	3300031846	Soil	PSATPDRVKQNHTGLAKKVETYLARMGMPKRLFQEITAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0306919_100492364	3300031879	Soil	NFDQKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQKMSAQQSSAKMRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0306919_101552223	3300031879	Soil	TEFVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0306919_103277021	3300031879	Soil	FDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0306925_104891082	3300031890	Soil	NLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0306925_105663783	3300031890	Soil	ERAKRKYAGLAKTVETYLARMGMPKMLFQEMNQQSSGNVLLVDARRLKMLGLDGTDPAYEQWLRANNYEQPPQSD
Ga0306925_108107211	3300031890	Soil	MNFDQKEFVASLLSDKAKQKYTGVAKRIETCLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0318536_100331993	3300031893	Soil	AKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318551_100512282	3300031896	Soil	KYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0310912_101828201	3300031941	Soil	VAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLRSLGLDGIDPAYEQWLRENNNQQPPQSN
Ga0310916_101437811	3300031942	Soil	SLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0310913_101392103	3300031945	Soil	NVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0306922_112754741	3300032001	Soil	NLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNNQRPPPSN
Ga0310911_100876855	3300032035	Soil	FVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0310911_104161031	3300032035	Soil	RMNFDQKEFVASLLSDKAKQKYTGVAKRIETCLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0318545_100355181	3300032042	Soil	TPTPQNVGLQRMNFAQKELPSATPDRVKQNHTGLAKKVETYLARMGMPKRLFQEITAQQSSDTVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0318532_102782961	3300032051	Soil	ANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318533_103145671	3300032059	Soil	KRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318533_104282751	3300032059	Soil	VGLQRMNFDQKEFVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0318533_105415851	3300032059	Soil	GLQRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318504_103467921	3300032063	Soil	GVRRTPTSQNVGLQRMNFAQKELPSATPDRVKQNHPGLAKKVETYLARMGMPKRLFQEITAQQSSDKVRLLDSGRLKALGLDGIDPAYEQWLRDNNQERLQSN
Ga0318513_105794082	3300032065	Soil	VRRIPAPENVGLQRMNFDQKEFVANLSSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0306924_103603921	3300032076	Soil	FDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0306924_105240812	3300032076	Soil	QRMNFDQKEFVANLSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGIDPAYEQWLRENNIQQPPPSN
Ga0318577_103334152	3300032091	Soil	AGVRRAPAPENVGLQRMNFDQKEFVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRVLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0318540_100554735	3300032094	Soil	YTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGTDPAYEQWLRENNIQQPPPSN
Ga0318540_100641461	3300032094	Soil	MNFDQKEFVASLPSDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN
Ga0306920_1003432094	3300032261	Soil	KAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0310914_103944253	3300033289	Soil	FDQKEFVANVSPDKAKQKYTGVAKRVETYLARMGMPKKLFQEMSAQQSSPKVRLLDAAKLKTLGLDGSDPAYEQWLRENNNQRPPPSN
Ga0310914_104821332	3300033289	Soil	GVRRIPAPENVGLQRMNFDQKEFVASLLSDKAKQKYTGVAKRIETCLARMGMPKKLCQEMTAQQASAKVRLLDSAKLKTLGLDGTDPAYEQWLRENSNEQPARSNRE
Ga0318519_101160601	3300033290	Soil	AGLAKTIETYLARMGMPKKLFQEISQQSSGKVLLLDARRLKMLGLDGTDPAYERWLRENNYEQPPQSD
Ga0318519_103652951	3300033290	Soil	RIPSPENVGLQRMNFDQKEFVASLPPDKAKLKYIGVAKRVETYLARMGMPKKLFQEMSAQQSSAKVRLLDAAKLKSLGLDGADPAYEQWLRENNNQRPPPSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F044704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences