NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F044931

Metagenome Family F044931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F044931
Family Type Metagenome
Number of Sequences 153
Average Sequence Length 41 residues
Representative Sequence MAAGTISLVAVLRDARKSALLRTRLMDDIDMIRTMETLY
Number of Associated Samples 85
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.62 %
% of genes near scaffold ends (potentially truncated) 40.52 %
% of genes from short scaffolds (< 2000 bps) 77.12 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.203 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(48.366 % of family members)
Environment Ontology (ENVO) Unclassified
(41.176 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.366 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.73%    β-sheet: 0.00%    Coil/Unstructured: 46.27%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF01977UbiD 5.88
PF00355Rieske 3.27
PF00528BPD_transp_1 3.27
PF03401TctC 2.61
PF00005ABC_tran 2.61
PF13531SBP_bac_11 1.96
PF00881Nitroreductase 1.96
PF00920ILVD_EDD 1.96
PF13458Peripla_BP_6 1.31
PF00571CBS 1.31
PF09084NMT1 1.31
PF12706Lactamase_B_2 1.31
PF00890FAD_binding_2 1.31
PF03331LpxC 1.31
PF05726Pirin_C 1.31
PF01594AI-2E_transport 1.31
PF00296Bac_luciferase 1.31
PF07883Cupin_2 1.31
PF01425Amidase 1.31
PF01458SUFBD 1.31
PF03693ParD_antitoxin 0.65
PF01642MM_CoA_mutase 0.65
PF02627CMD 0.65
PF00196GerE 0.65
PF02390Methyltransf_4 0.65
PF05378Hydant_A_N 0.65
PF12071DUF3551 0.65
PF02608Bmp 0.65
PF13561adh_short_C2 0.65
PF04536TPM_phosphatase 0.65
PF07331TctB 0.65
PF06277EutA 0.65
PF00903Glyoxalase 0.65
PF13472Lipase_GDSL_2 0.65
PF08770SoxZ 0.65
PF02910Succ_DH_flav_C 0.65
PF00892EamA 0.65
PF00156Pribosyltran 0.65
PF02705K_trans 0.65
PF07992Pyr_redox_2 0.65
PF02900LigB 0.65
PF13620CarboxypepD_reg 0.65
PF01494FAD_binding_3 0.65
PF03737RraA-like 0.65
PF00392GntR 0.65
PF14384BrnA_antitoxin 0.65
PF12146Hydrolase_4 0.65
PF00115COX1 0.65
PF14681UPRTase 0.65
PF02798GST_N 0.65
PF01075Glyco_transf_9 0.65
PF13551HTH_29 0.65
PF11899DUF3419 0.65
PF06007PhnJ 0.65
PF04909Amidohydro_2 0.65
PF00158Sigma54_activat 0.65
PF13506Glyco_transf_21 0.65
PF13673Acetyltransf_10 0.65
PF05987DUF898 0.65
PF07676PD40 0.65
PF01058Oxidored_q6 0.65
PF07298NnrU 0.65
PF12840HTH_20 0.65
PF02738MoCoBD_1 0.65
PF13340DUF4096 0.65
PF07690MFS_1 0.65
PF08240ADH_N 0.65
PF13442Cytochrome_CBB3 0.65
PF00346Complex1_49kDa 0.65
PF01182Glucosamine_iso 0.65
PF01370Epimerase 0.65
PF03466LysR_substrate 0.65
PF02653BPD_transp_2 0.65
PF12833HTH_18 0.65
PF07366SnoaL 0.65
PF05425CopD 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 5.88
COG0129Dihydroxyacid dehydratase/phosphogluconate dehydrataseCarbohydrate transport and metabolism [G] 3.92
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.61
COG0145N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunitAmino acid transport and metabolism [E] 1.31
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 1.31
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 1.31
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.31
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.31
COG0719Fe-S cluster assembly scaffold protein SufBPosttranslational modification, protein turnover, chaperones [O] 1.31
COG0774UDP-3-O-acyl-N-acetylglucosamine deacetylaseCell wall/membrane/envelope biogenesis [M] 1.31
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 1.31
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.31
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.31
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 0.65
COG0220tRNA G46 N7-methylase TrmBTranslation, ribosomal structure and biogenesis [J] 0.65
COG03636-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminaseCarbohydrate transport and metabolism [G] 0.65
COG0377NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductaseEnergy production and conversion [C] 0.65
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.65
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.65
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.65
COG0649NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)Energy production and conversion [C] 0.65
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.65
COG0684RNA degradosome component RraA (regulator of RNase E activity)Translation, ribosomal structure and biogenesis [J] 0.65
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 0.65
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 0.65
COG1740Ni,Fe-hydrogenase I small subunitEnergy production and conversion [C] 0.65
COG1744Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupNSignal transduction mechanisms [T] 0.65
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 0.65
COG1941Coenzyme F420-reducing hydrogenase, gamma subunitEnergy production and conversion [C] 0.65
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.65
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.65
COG3158K+ uptake protein KupInorganic ion transport and metabolism [P] 0.65
COG3260Ni,Fe-hydrogenase III small subunitEnergy production and conversion [C] 0.65
COG3261Ni,Fe-hydrogenase III large subunitEnergy production and conversion [C] 0.65
COG3609Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domainTranscription [K] 0.65
COG3627Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase PhnJInorganic ion transport and metabolism [P] 0.65
COG4094Uncharacterized membrane proteinFunction unknown [S] 0.65
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.65
COG4269Uncharacterized membrane protein YjgN, DUF898 familyFunction unknown [S] 0.65
COG4819Ethanolamine utilization protein EutA, possible chaperoninAmino acid transport and metabolism [E] 0.65

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.86 %
UnclassifiedrootN/A26.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002907|JGI25613J43889_10033320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1459Open in IMG/M
3300002907|JGI25613J43889_10161534Not Available586Open in IMG/M
3300002910|JGI25615J43890_1050650All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300002910|JGI25615J43890_1065275All Organisms → cellular organisms → Bacteria → Proteobacteria619Open in IMG/M
3300002914|JGI25617J43924_10010490All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3018Open in IMG/M
3300002914|JGI25617J43924_10024718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2104Open in IMG/M
3300002914|JGI25617J43924_10104665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1009Open in IMG/M
3300002914|JGI25617J43924_10204623Not Available657Open in IMG/M
3300002914|JGI25617J43924_10343615Not Available517Open in IMG/M
3300002917|JGI25616J43925_10077759All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1394Open in IMG/M
3300004080|Ga0062385_10923288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria581Open in IMG/M
3300005176|Ga0066679_11017547Not Available515Open in IMG/M
3300005186|Ga0066676_10980756All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005332|Ga0066388_100161284All Organisms → cellular organisms → Bacteria → Proteobacteria2833Open in IMG/M
3300005332|Ga0066388_100306667All Organisms → cellular organisms → Bacteria2233Open in IMG/M
3300005332|Ga0066388_101183204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1305Open in IMG/M
3300005332|Ga0066388_108726231Not Available503Open in IMG/M
3300005557|Ga0066704_10613595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria698Open in IMG/M
3300005764|Ga0066903_100288351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2582Open in IMG/M
3300005764|Ga0066903_102909380All Organisms → cellular organisms → Bacteria → Proteobacteria928Open in IMG/M
3300005764|Ga0066903_104856733All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria714Open in IMG/M
3300005764|Ga0066903_105786697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae649Open in IMG/M
3300005764|Ga0066903_106574178All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005764|Ga0066903_107811619Not Available550Open in IMG/M
3300007255|Ga0099791_10003477All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6406Open in IMG/M
3300007255|Ga0099791_10004114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae5949Open in IMG/M
3300007255|Ga0099791_10027292All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH102487Open in IMG/M
3300007258|Ga0099793_10031878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2244Open in IMG/M
3300007265|Ga0099794_10263000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129891Open in IMG/M
3300007265|Ga0099794_10300372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium831Open in IMG/M
3300007788|Ga0099795_10016784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2323Open in IMG/M
3300007788|Ga0099795_10077736Not Available1264Open in IMG/M
3300007788|Ga0099795_10599539Not Available524Open in IMG/M
3300009038|Ga0099829_10027435All Organisms → cellular organisms → Bacteria → Proteobacteria4013Open in IMG/M
3300009038|Ga0099829_10109095All Organisms → cellular organisms → Bacteria → Proteobacteria2164Open in IMG/M
3300009038|Ga0099829_10190548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1655Open in IMG/M
3300009038|Ga0099829_10727441Not Available824Open in IMG/M
3300009088|Ga0099830_10122433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1970Open in IMG/M
3300009088|Ga0099830_10196852All Organisms → cellular organisms → Bacteria → Proteobacteria1575Open in IMG/M
3300009088|Ga0099830_10634410Not Available877Open in IMG/M
3300009089|Ga0099828_10228559All Organisms → cellular organisms → Bacteria → Proteobacteria1664Open in IMG/M
3300009089|Ga0099828_10436613All Organisms → cellular organisms → Bacteria → Proteobacteria1180Open in IMG/M
3300009089|Ga0099828_10823388Not Available831Open in IMG/M
3300009089|Ga0099828_11471469Not Available601Open in IMG/M
3300009090|Ga0099827_10316654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1322Open in IMG/M
3300009090|Ga0099827_10769644All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300009090|Ga0099827_10790080Not Available821Open in IMG/M
3300009090|Ga0099827_12007597All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium502Open in IMG/M
3300009143|Ga0099792_10015770All Organisms → cellular organisms → Bacteria → Proteobacteria3280Open in IMG/M
3300009143|Ga0099792_10316023Not Available932Open in IMG/M
3300009143|Ga0099792_10524653Not Available745Open in IMG/M
3300009143|Ga0099792_10797629Not Available618Open in IMG/M
3300009792|Ga0126374_10939215Not Available673Open in IMG/M
3300009824|Ga0116219_10320640All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria871Open in IMG/M
3300010358|Ga0126370_10903539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium798Open in IMG/M
3300010359|Ga0126376_11160191Not Available785Open in IMG/M
3300010360|Ga0126372_13090693Not Available517Open in IMG/M
3300010362|Ga0126377_13091800Not Available537Open in IMG/M
3300010366|Ga0126379_10113813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2439Open in IMG/M
3300010366|Ga0126379_10208581All Organisms → cellular organisms → Bacteria → Proteobacteria1886Open in IMG/M
3300010376|Ga0126381_102595891All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_70_13725Open in IMG/M
3300010398|Ga0126383_10516648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1255Open in IMG/M
3300010398|Ga0126383_13472840All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300011269|Ga0137392_10007786All Organisms → cellular organisms → Bacteria6936Open in IMG/M
3300011269|Ga0137392_10164858All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300011271|Ga0137393_10931643Not Available741Open in IMG/M
3300011411|Ga0153933_1125112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium543Open in IMG/M
3300012096|Ga0137389_10080376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2545Open in IMG/M
3300012096|Ga0137389_10083772All Organisms → cellular organisms → Bacteria2498Open in IMG/M
3300012096|Ga0137389_10157527All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300012096|Ga0137389_10337927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1280Open in IMG/M
3300012096|Ga0137389_11054026All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300012189|Ga0137388_10103333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2452Open in IMG/M
3300012189|Ga0137388_10249996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1613Open in IMG/M
3300012189|Ga0137388_10625805All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300012189|Ga0137388_11108048All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300012189|Ga0137388_11779863Not Available548Open in IMG/M
3300012202|Ga0137363_10189393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.1643Open in IMG/M
3300012203|Ga0137399_10592694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales932Open in IMG/M
3300012205|Ga0137362_10150886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1987Open in IMG/M
3300012361|Ga0137360_10164773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1770Open in IMG/M
3300012361|Ga0137360_11861383All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300012362|Ga0137361_10617231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium993Open in IMG/M
3300012685|Ga0137397_10446607All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales963Open in IMG/M
3300012917|Ga0137395_10168944All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300012918|Ga0137396_10274128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MJM86451246Open in IMG/M
3300012923|Ga0137359_10076704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2930Open in IMG/M
3300012927|Ga0137416_11036187Not Available734Open in IMG/M
3300012944|Ga0137410_10166348Not Available1690Open in IMG/M
3300012971|Ga0126369_10316225Not Available1569Open in IMG/M
3300012971|Ga0126369_10487537All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300012971|Ga0126369_13093678All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus545Open in IMG/M
3300014658|Ga0181519_10089187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2004Open in IMG/M
3300014658|Ga0181519_10570401Not Available697Open in IMG/M
3300014838|Ga0182030_10760233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria895Open in IMG/M
3300014838|Ga0182030_10902581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria791Open in IMG/M
3300016357|Ga0182032_10034856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3118Open in IMG/M
3300016445|Ga0182038_10428991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis1114Open in IMG/M
3300017930|Ga0187825_10437339Not Available506Open in IMG/M
3300017955|Ga0187817_10853834Not Available582Open in IMG/M
3300017961|Ga0187778_10287721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1061Open in IMG/M
3300017970|Ga0187783_10073602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2515Open in IMG/M
3300017975|Ga0187782_10475104All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300018062|Ga0187784_10975871All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300020199|Ga0179592_10254826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129787Open in IMG/M
3300020199|Ga0179592_10405425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales594Open in IMG/M
3300021086|Ga0179596_10325130Not Available770Open in IMG/M
3300021476|Ga0187846_10214502All Organisms → cellular organisms → Bacteria → Proteobacteria804Open in IMG/M
3300021476|Ga0187846_10214836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Alsobacteraceae → Alsobacter → unclassified Alsobacter → Alsobacter sp. SYSU M60028804Open in IMG/M
3300021560|Ga0126371_13207349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium553Open in IMG/M
3300026304|Ga0209240_1022509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2414Open in IMG/M
3300026304|Ga0209240_1023433Not Available2365Open in IMG/M
3300026304|Ga0209240_1023985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2334Open in IMG/M
3300026319|Ga0209647_1158209Not Available935Open in IMG/M
3300026320|Ga0209131_1000532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales27301Open in IMG/M
3300026320|Ga0209131_1014448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4843Open in IMG/M
3300026351|Ga0257170_1014900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria990Open in IMG/M
3300026351|Ga0257170_1021130All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300026377|Ga0257171_1034233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium870Open in IMG/M
3300026551|Ga0209648_10089828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2542Open in IMG/M
3300026551|Ga0209648_10103486All Organisms → cellular organisms → Bacteria → Proteobacteria2328Open in IMG/M
3300026557|Ga0179587_10323386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium997Open in IMG/M
3300026557|Ga0179587_10649958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860694Open in IMG/M
3300027655|Ga0209388_1006659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3008Open in IMG/M
3300027671|Ga0209588_1197402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium628Open in IMG/M
3300027846|Ga0209180_10339794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium857Open in IMG/M
3300027846|Ga0209180_10344664All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300027875|Ga0209283_10398449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria897Open in IMG/M
3300027875|Ga0209283_10584119All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300027882|Ga0209590_10971810Not Available531Open in IMG/M
3300027903|Ga0209488_10051262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3036Open in IMG/M
3300027903|Ga0209488_10171823Not Available1637Open in IMG/M
3300027903|Ga0209488_10300212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1199Open in IMG/M
3300027903|Ga0209488_10523374All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales867Open in IMG/M
3300027903|Ga0209488_10654968Not Available756Open in IMG/M
3300027903|Ga0209488_11035631Not Available565Open in IMG/M
3300027903|Ga0209488_11154762Not Available525Open in IMG/M
3300028536|Ga0137415_10075784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3224Open in IMG/M
3300031564|Ga0318573_10396800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium741Open in IMG/M
3300031680|Ga0318574_10800790All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031719|Ga0306917_10464506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae992Open in IMG/M
3300031793|Ga0318548_10375928All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria697Open in IMG/M
3300031879|Ga0306919_10116846All Organisms → cellular organisms → Bacteria1903Open in IMG/M
3300031880|Ga0318544_10375837All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031912|Ga0306921_12490763All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300031954|Ga0306926_11314182Not Available843Open in IMG/M
3300032066|Ga0318514_10403776All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria725Open in IMG/M
3300032076|Ga0306924_11242021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium804Open in IMG/M
3300032160|Ga0311301_10003878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales54461Open in IMG/M
3300032261|Ga0306920_102614628All Organisms → cellular organisms → Bacteria → Proteobacteria692Open in IMG/M
3300032261|Ga0306920_103346737Not Available597Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil48.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.23%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.31%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.31%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.31%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.31%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.31%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.65%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.65%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011411Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25613J43889_1003332023300002907Grasslands SoilMAAGTTSLVAVLRDARILRQALRSALLRTRLKDVNRVIRAIETLY*
JGI25613J43889_1016153423300002907Grasslands SoilMTAGTIPFVAVLRDARKSALLRTRLMDDVDMIRTMETLY*
JGI25615J43890_105065023300002910Grasslands SoilMAAGTIALVAVLRDARKSALLRTRLMDDVDMIRSMETLN*
JGI25615J43890_106527513300002910Grasslands SoilMAAGTMSLVAVLRDARKSALLRTRLMDDIVMIQTSETLY*
JGI25617J43924_1001049023300002914Grasslands SoilMAAGTISPVAVLRDARKSALLRTRLMDDVDMIRSMETPL*
JGI25617J43924_1002471813300002914Grasslands SoilMAAGTISLAAVLRDARILRQALRSALLRTRLMDDVNMIRTMETLY*
JGI25617J43924_1010466523300002914Grasslands SoilMAAGTISPVAVLRDARKSALLRTRLMDDVHMIRTMETLY*
JGI25617J43924_1020462323300002914Grasslands SoilMAAGAVSPVAVLRDARKSALLRTRLTDEIDMIRTMETLY*
JGI25617J43924_1034361513300002914Grasslands SoilMAAGTISLVAVLRDARILRQALRSALLRRRLTDDVDMIFTVEAPY*
JGI25616J43925_1007775913300002917Grasslands SoilMAAGTILLAAVLRDARKSALLRTRLMDGIHMIRTMETLL*
Ga0062385_1092328823300004080Bog Forest SoilMDAGTTSLVAVLRDARKSALLRTRLFDDIDMIRISETRY*
Ga0066679_1101754723300005176SoilMAASATSLLAVLRDARQSALLWTRLMNGVDMIRTSETLH*
Ga0066676_1098075623300005186SoilMATGTAGQAAILRDARKSALLRMRSVQDIDMIRTSETHY*
Ga0066388_10016128423300005332Tropical Forest SoilMAAGTISLVAVLRDARKSALLRTRVMDDIGMGRTIETLD*
Ga0066388_10030666743300005332Tropical Forest SoilMAAGAISPVAVLRDARILRQALRSALLRTRPMDDIDMIRTMEPLY*
Ga0066388_10118320423300005332Tropical Forest SoilMPAGTISPVAVLRDARKSALLRTRLMDDVDMIRTMEALY*
Ga0066388_10446671423300005332Tropical Forest SoilMARGAISPVAVLRDARKSALLRTRPMDGIDMIRTMGNAVLDASTL*
Ga0066388_10872623123300005332Tropical Forest SoilMAAGTVSFVAVLRDARESALLRTRLKDDFDVIGSTETLH*
Ga0066704_1061359523300005557SoilLLGGRLEMATGTAGQAAILRDARKSALLRMRSVQDIDMIRTSETHY*
Ga0066903_10028835123300005764Tropical Forest SoilMAAGTVSLVAVLRDARILRQALRGALLRTRPMADFNMIRTVEKP*
Ga0066903_10290938023300005764Tropical Forest SoilMAAGTISLVAVLRDARKSALLRTRLMDDIDMICTTETLY*
Ga0066903_10485673323300005764Tropical Forest SoilMADGTIALVAVLRDARKSALLWTRLMNGVDMPRTSETPY*
Ga0066903_10578669723300005764Tropical Forest SoilMAVGTISLVAVLRDARILRQALKSALLRTRLMDGIDMIRTMETLY*
Ga0066903_10657417813300005764Tropical Forest SoilMAAGTVSPVAVLRDARKRAPQDEADGDDIDMIRTMETLY*
Ga0066903_10781161923300005764Tropical Forest SoilMATGAISLAAVLRDARKSALLRARLMDDFNMIRNM
Ga0099791_1000347753300007255Vadose Zone SoilMAAGTISLVAVLRDARILRQGLRSALLRTRLKDDIDMICTTDTLH*
Ga0099791_1000411423300007255Vadose Zone SoilMAVGTIWRVAVLRDARILRQALRSALLRTRLMDDIDVISTMDTLY*
Ga0099791_1002729233300007255Vadose Zone SoilMAAGTMSLVAVLRDARKGALLRTRLKDDFDVIRATETLH*
Ga0099793_1003187833300007258Vadose Zone SoilMATGMISLVAVLRDARILRQALRSALLRTRPMDDIDMIRAMETLD*
Ga0099794_1026300023300007265Vadose Zone SoilMAAGTISPVAVLRDARILRQALRSALLRTRLMDDIDVISTMDTLY*
Ga0099794_1030037213300007265Vadose Zone SoilMAAGTISLVAVLRDARILRQGLRSALLRTRLKDDIDMI
Ga0099795_1001678443300007788Vadose Zone SoilMAAGTISPVAVLRDARKSALLRTRLMDDVDIIRAIETLY*
Ga0099795_1007773623300007788Vadose Zone SoilTGTVSLVAVLRDARILRQALRSALLRTRLMDDIDA*
Ga0099795_1059953913300007788Vadose Zone SoilMAAGTASPVAVLRDARKSALLRTRLMDDGDAITSP
Ga0099829_1002743533300009038Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLMDDVDMIRTMETPL*
Ga0099829_1010909523300009038Vadose Zone SoilMTAGTIPFVAVLRDARILRQALRSALLRTRLMDDVDMIRTTETLY*
Ga0099829_1019054823300009038Vadose Zone SoilMAAGTNSLAAVLRDARKSALLRTRLKDEIDVIRTPETLY*
Ga0099829_1072744133300009038Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLMDDVDMIRTMETLD*
Ga0099830_1012243313300009088Vadose Zone SoilMVRGPRISLVAVLRDARILRQALRSALLRTRLMDDID
Ga0099830_1019685233300009088Vadose Zone SoilMAAGTISLVAVLREARKSALLRTRLMDDVDMIRTMETPL*
Ga0099830_1063441013300009088Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLMDDVDMIRTMETLD
Ga0099828_1022855913300009089Vadose Zone SoilGPTNSLVAVLRDARKSALLRTRLMDHIDMIGVMETPH*
Ga0099828_1043661323300009089Vadose Zone SoilMATGRNSLVAVLRDARILRQALRSALLRTRLMDDVDVIRTMETLY*
Ga0099828_1082338813300009089Vadose Zone SoilISPVAVLRDARKSALLRTRLMADIDMIRTTETLY*
Ga0099828_1147146923300009089Vadose Zone SoilLRDARILRQALRSALLRTRLMDDINMIFTVETPC*
Ga0099827_1031665413300009090Vadose Zone SoilMAAGTISRVAVLRDARILRQGLRSALLRTRLMDKIDMI
Ga0099827_1076964423300009090Vadose Zone SoilMAAGTISPVAVLRDARILRQALRSALLRTRLMDHIDMIGIT
Ga0099827_1079008013300009090Vadose Zone SoilMAAGAISPVAVLRDARKCALLRTRLMDDIDLIRTVETLS*
Ga0099827_1200759713300009090Vadose Zone SoilLFARPSRWMAAGAISLVAVLRDARILRQVLRSALLRTKLMDDIDMIRAMETLD*
Ga0099792_1001577043300009143Vadose Zone SoilMATGRNSLVAVLRDARKSALLRTRLMDDVDVIRTMETLY*
Ga0099792_1031602333300009143Vadose Zone SoilAAGTISLVAVLRDARKSALLRTRLMDDVDMIRTMETLD*
Ga0099792_1052465323300009143Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLTDDVDMIRTMETLY*
Ga0099792_1079762923300009143Vadose Zone SoilAVLRDARILRQALRSALLRTRLMDDIDMIFTMETPH*
Ga0126374_1093921523300009792Tropical Forest SoilMATGTISPVAVLRDARESALLRTGAVIVDFNMIWTMETLY*
Ga0116219_1032064013300009824Peatlands SoilASRSDASRRMDAITISPAAVLRDARKSALLRTRFVNDIDMIRISETLSQG*
Ga0126370_1090353913300010358Tropical Forest SoilMAAGTISLVAVLRDARKSALLRTRLKDDIGMIRTMETLY*
Ga0126376_1116019123300010359Tropical Forest SoilMATGTISLVAVLRDARKSTLLRTRLMGDVDMIRIMETPY*
Ga0126372_1309069323300010360Tropical Forest SoilAVLRDARSFDKLRSALLRTRLMDDVDMMRTIETLC*
Ga0126377_1309180023300010362Tropical Forest SoilMAAGAISLVAVLRDARKSALLRTRLMDDVDMIRAMETQYE*
Ga0126379_1011381333300010366Tropical Forest SoilMSAGTISPAAVLRDARKSALLRTRAVVVDLNMIRTVETLY*
Ga0126379_1020858123300010366Tropical Forest SoilMAAGTISLVAVLRDARILRQALRSALLRTRAMVVDLNMIRIMETLY*
Ga0126381_10259589113300010376Tropical Forest SoilMAAGTISLVAVLRDARKSALLRTRAVVVDLDMIRTMETLYRIAR*
Ga0126383_1051664813300010398Tropical Forest SoilMAAGAISLVAVLRDARKSALLRTRAVVVDLDMIRTMETLYRIAR*
Ga0126383_1347284013300010398Tropical Forest SoilGTISLVAVLRDARILRQALRSALLTTRLMGDIDMIQSW*
Ga0137392_1000778633300011269Vadose Zone SoilMAAGAISLVAVLRDARILRQVLRSALLRTKLMDDIDMIRAMETLD*
Ga0137392_1016485813300011269Vadose Zone SoilPSRRMAAGTISLVAVLRDARKSALLRTRLMGDIDMIRTMETPY*
Ga0137393_1093164323300011271Vadose Zone SoilMAAGTISPVAVLRDAASFDKLRSALLRTRLMDDIDMIFATETLY*
Ga0153933_112511213300011411Attine Ant Fungus GardensMDAITVSPVAVLRDARKSALLRTRSVDEIDMIRFSETLFWPQANGPR
Ga0137389_1008037643300012096Vadose Zone SoilMATGTISLVAILRDARESALLRTRLMDDIDMIRTVETLY*
Ga0137389_1008377233300012096Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLMDDIDMIRTMETLY*
Ga0137389_1015752723300012096Vadose Zone SoilMAAGTISRVAVLRDARILRQALRSALLRTRLMDDIDMIFTMETLN*
Ga0137389_1033792723300012096Vadose Zone SoilMAAGTNSLAAVLRDARKSALLRTRLKDEIDVIRTTETLY*
Ga0137389_1105402613300012096Vadose Zone SoilISLVAVLRDARKSALLRTRLMDDIDMIRTMETLY*
Ga0137388_1010333343300012189Vadose Zone SoilMATGTISLVAILRDARESALLRTRLMDDIDMIRTMETLY*
Ga0137388_1024999623300012189Vadose Zone SoilMAAGTISLAAVLRDARKSALLRTRLMDDIDMIRSMETLY*
Ga0137388_1062580523300012189Vadose Zone SoilMAAGTISLVAVLRDARKSALLRTRLKDDIHVIRSTETLY*
Ga0137388_1110804823300012189Vadose Zone SoilMAAGTISRVAVLRDARILRQALRSALLRTRLMDDIDMILTMKTLYYCPPN
Ga0137388_1177986313300012189Vadose Zone SoilASRRMAAGTISRVAVLRDARKSALLRTKLMDDIDMIRTMETQY*
Ga0137363_1018939323300012202Vadose Zone SoilMTAGTIPFVAVLRDARKSSLLKTRLMDDVDMIRTMETLH*
Ga0137399_1059269413300012203Vadose Zone SoilTGMISLVAVLRDARILRQALRSALLRTRPMDDINMLCSMETLD*
Ga0137399_1076272013300012203Vadose Zone SoilWGHKRMAAGSVSLVAVLRDALKSALLRTRLIDASI*
Ga0137362_1015088633300012205Vadose Zone SoilMAAGTVSPVAVLRDARKSALLRTRLMDDIDTIRTMEALH*
Ga0137360_1016477323300012361Vadose Zone SoilMSLVAVLRDARKSALLRTRLIDDIDTIHTVETQY*
Ga0137360_1186138323300012361Vadose Zone SoilSLAAVLRDARILRQALRSALLRTRLMDDIDMIRTSETLH*
Ga0137361_1061723123300012362Vadose Zone SoilMAAGTISRVAVLRDARKSALLRTRLMDDVDLIRLELCGCR
Ga0137397_1044660723300012685Vadose Zone SoilMTAGTISLVAVLRDARILRQGLRSALLRTRLKDDIDMICTTDTLH*
Ga0137395_1016894413300012917Vadose Zone SoilIPFVAVLRDARILRQALRSALLRTRLMDDVDMIRTTETLY*
Ga0137396_1027412813300012918Vadose Zone SoilMAAGTISRVAVLRDARILRQALGSALLRTRLMDDIDMIF
Ga0137359_1007670423300012923Vadose Zone SoilMTAGTIPFVAVLRDARKTALLRTRLMDDVDMIRTMETLY*
Ga0137416_1103618713300012927Vadose Zone SoilSLVAVLRDARILRQALRSALLRTRLKDVNRVIRAIETLY*
Ga0137410_1016634823300012944Vadose Zone SoilGTVSLVAVLRDARILRQALRSALLRTRLMDDIDA*
Ga0126369_1031622523300012971Tropical Forest SoilMATGTISPAAVLRDARILRQALRSALLRTRLMGDIDMIRIMEAPY*
Ga0126369_1048753713300012971Tropical Forest SoilAVLRDARILRQALRSALLRTRAVVVDLNMIRTMETLY*
Ga0126369_1309367823300012971Tropical Forest SoilMAAGTISLAAVLRDARILRQALRSALLRTRAVAVDLNMIRTMETLY*
Ga0181519_1008918743300014658BogMDAGTISPVAVLRDARKSALLWTRFTDDIDMIRTSE
Ga0181519_1057040113300014658BogAASRRMDAGTISPVAVLRDARKSALLWTRFTDDIDMIRTSETMG*
Ga0182030_1076023323300014838BogMDAGTISPVAVLRDARKSALLWTRFTDDIDMIRTSETMG*
Ga0182030_1090258113300014838BogMDAGTISPVAVLRDARKSALLWTRFTDDVDMIRTSETMG*
Ga0182032_1003485663300016357SoilMVTGTASPVAVLRDARKSALLRTRVDVDTDMLRTSETVR
Ga0182038_1042899113300016445SoilVRSTASRRTDAGVTSPVAVLRDARKSALLRTRLIDYIGTIRIA
Ga0187825_1043733913300017930Freshwater SedimentTNHIGRVERMDTDAILHVAVLRDARKSALLIRTRLIDRIDMIRTSETMY
Ga0187817_1085383423300017955Freshwater SedimentMATGTISSAAVLRDARSFDKLRSALLRTRLMDDIDMIQTMETRY
Ga0187778_1028772123300017961Tropical PeatlandMAAGTASPVAVLRDARKSALLRTRLIDDIDMIQTMETLY
Ga0187783_1007360213300017970Tropical PeatlandMATGTISLVAVLRDARKSALLRTRLMDKSDMIRTMETAFESAGNSRP
Ga0187782_1047510423300017975Tropical PeatlandMATGTISPAAVLRDARKSALLRTRLKDESDTIRKMETVY
Ga0187784_1097587123300018062Tropical PeatlandMAAGTISLVAVLRDARKSALLRTRLMNDVDMIRTMEALY
Ga0179592_1025482623300020199Vadose Zone SoilMAAGTISPVAVLRDARILRQALRSALLRTRLMDDIDVISTMDTLY
Ga0179592_1040542523300020199Vadose Zone SoilMAAGTMSLVAVLRDARKGALLRTRLKDDFDVIRATETLH
Ga0179596_1032513023300021086Vadose Zone SoilSRRMDVGTISLVAVLRDGAARLLRTRFFDDIDMIRTSETLY
Ga0187846_1021450223300021476BiofilmMAAGTISPVAVLRDARKSALLRTRLKDEIDMIRSMETLY
Ga0187846_1021483623300021476BiofilmMAAGTASLVAALRDARKSALLRARLTDVDMIGIMETFTRSD
Ga0126371_1320734923300021560Tropical Forest SoilMAAGTISLVAVLRDARKSALLRTRAVVVDLDMIRTMETLYRIAR
Ga0209240_102250933300026304Grasslands SoilMAAGTISPVAVLRDARKSALLRTRLMDDVDMIRSMETPL
Ga0209240_102343323300026304Grasslands SoilMAAGTISLVAVLRDARKSALLRTRLKDDTDVIYTMEMLY
Ga0209240_102398523300026304Grasslands SoilMAAGTILLAAVLRDARILRQALRSALLRTRLMDGIHMIRTMETLL
Ga0209647_115820913300026319Grasslands SoilPSRRMAAGTASLVAVLRDARILRQALRSALLRTRLKDVNRVIRAIETLY
Ga0209131_1000532223300026320Grasslands SoilMTAGTIPFVAVLRDARKSALLRTRLMDDVDMIRTMETLY
Ga0209131_101444833300026320Grasslands SoilMAAGTTSLVAVLRDARILRQALRSALLRTRLKDVNRVIRAIETLY
Ga0257170_101490013300026351SoilMAAGTISLVAVLRDARILRQALRSALLRTRLMDDIDA
Ga0257170_102113023300026351SoilTGTVSLVAVLRDARILRQALRSALLRTRLMDDIDA
Ga0257171_103423313300026377SoilMAAGAISLVAVLRDARILRQVLRSALLRTKLMDDIDMIRAMETLD
Ga0209648_1008982813300026551Grasslands SoilMAAGTISLAAVLRDARILRQALRSALLRTRLMDDVNMIRTMETLY
Ga0209648_1010348633300026551Grasslands SoilMAAGTISLVAVLRDARILRQALRSALLRRRLTDDVDMIFTVEAPY
Ga0179587_1032338633300026557Vadose Zone SoilMAVGTIWRVAVLRDARILRQALRSALLRTRLMDDIDMIFA
Ga0179587_1064995813300026557Vadose Zone SoilARPSRRMAVGTIWRVAVLRDARILRQALRSALLRTRLMDDIDVISTMDTLY
Ga0209388_100665923300027655Vadose Zone SoilMAAGTISLVAVLRDARILRQGLRSALLRTRLKDDIDMICTTDTLH
Ga0209588_119740223300027671Vadose Zone SoilMAAGTISLVAVLRDARILRQGLRSALLRTRLKDDIDMICT
Ga0209180_1033979423300027846Vadose Zone SoilMAAGTNSLAAVLRDARKSALLRTRLKDEIDVIRTPETLY
Ga0209180_1034466423300027846Vadose Zone SoilMTAGTIPFVAVLRDARILRQALRSALLRTRLMDDVDMIRTTETLY
Ga0209283_1039844923300027875Vadose Zone SoilMATGRNSLVAVLRDARILRQALRSALLRTRLMDDVDVIRTMETLY
Ga0209283_1058411923300027875Vadose Zone SoilVAVLRDARILRQALRSALLRTRLTDDIDMTRIMETLY
Ga0209590_1097181023300027882Vadose Zone SoilMAAGAISPVAVLRDARKCALLRTRLMDDIDLIRTVEMLS
Ga0209488_1005126213300027903Vadose Zone SoilGTISLVAVLRDARKSALLRTRLKDDIHVIRSTETLY
Ga0209488_1017182313300027903Vadose Zone SoilRPSRRMAAGMISLVAVLRDARKSALLRTRLMDDVDMIRTMETLD
Ga0209488_1030021223300027903Vadose Zone SoilMAAGTNSLAAVLRDARKSALLRTRLKDEIDVIRTTETLY
Ga0209488_1052337413300027903Vadose Zone SoilMAAGTISPVAVLRDARKSALLRTRLMDDVDIIRAIET
Ga0209488_1065496823300027903Vadose Zone SoilAVLRDARILRQALRSALLRTRLMDDIDMIFTMETPH
Ga0209488_1103563123300027903Vadose Zone SoilMAAGTIWRVAVLRDARILRQALRSALLRTRLMDDIDMIFTME
Ga0209488_1115476213300027903Vadose Zone SoilVAVLRDARILRQALRSALLRTRLMDDVDMIRTRKR
Ga0137415_1007578443300028536Vadose Zone SoilRIATGSISLVAVLRDARKSALLRTRLMDDVDMIRTMETLY
Ga0318573_1039680013300031564SoilGTTSLVAVLRDARESALLWTRLTNSVDSVRTSETLR
Ga0318574_1080079013300031680SoilMAAGATSLVAVLRDARKSALLWTRLMNGVGMIRTL
Ga0306917_1046450623300031719SoilMAAGTIALVAVLREPQDARILRQALRSALLRTRVVGDIDMIRTMKTLY
Ga0318548_1037592813300031793SoilGTTSSVAALRDARESALLRTRLIDDIDMIRTSETLR
Ga0306919_1011684613300031879SoilMAAGATSLVAVLRDARKSALLWTRLMNGVELIEPRERSTG
Ga0318544_1037583723300031880SoilVFRRMADGTISLVAVLRDARKSALLWTRLMNGVDMPRTSETPY
Ga0306921_1249076323300031912SoilMAAGTISLVAVLRDARKSALLRTRLMDDIDVIRTMKTLY
Ga0306926_1131418223300031954SoilMADGTISLVAVLRDARKSALLWTRLMNGVDMPRTSETPY
Ga0318514_1040377613300032066SoilMADGTISLVAVLRDARKSALLWTRLMNGVDMPRTSET
Ga0306924_1124202113300032076SoilRMATGTISPVAVLRDARKSALLRTRLMDDIDMICTTETLY
Ga0311301_10003878203300032160Peatlands SoilMDAITISPAAVLRDARKSALLRTRFVNDIDMIRISETLSQG
Ga0306920_10261462813300032261SoilSRRMAAGTIALVAVLREPQDARILRQALRSALLRTRVVGDIDMIRTMKTLY
Ga0306920_10334673713300032261SoilMAAGTISPVAVLRDARIFDKLRSALLRTRLKDDMHVIRIAEMLYQRATAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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