NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F045064

Metagenome / Metatranscriptome Family F045064

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F045064
Family Type Metagenome / Metatranscriptome
Number of Sequences 153
Average Sequence Length 43 residues
Representative Sequence MTKDKSPINFDKTIAGFNITEHGVKSYTKSIKLGPFQVTLN
Number of Associated Samples 110
Number of Associated Scaffolds 153

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 28.29 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 92.16 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.170 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(29.412 % of family members)
Environment Ontology (ENVO) Unclassified
(46.405 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(49.673 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 31.88%    Coil/Unstructured: 68.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 153 Family Scaffolds
PF02511Thy1 0.65

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 153 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 0.65


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.17 %
All OrganismsrootAll Organisms41.83 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10261167Not Available523Open in IMG/M
3300001687|WOR8_10030804All Organisms → Viruses7072Open in IMG/M
3300004448|Ga0065861_1150418Not Available553Open in IMG/M
3300005527|Ga0068876_10135876All Organisms → Viruses → Predicted Viral1451Open in IMG/M
3300006025|Ga0075474_10131706All Organisms → Viruses792Open in IMG/M
3300006026|Ga0075478_10150496Not Available726Open in IMG/M
3300006637|Ga0075461_10245151Not Available527Open in IMG/M
3300006639|Ga0079301_1061543All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1196Open in IMG/M
3300006641|Ga0075471_10648548Not Available516Open in IMG/M
3300006734|Ga0098073_1005867All Organisms → Viruses → Predicted Viral2452Open in IMG/M
3300006734|Ga0098073_1019325All Organisms → Viruses → Predicted Viral1033Open in IMG/M
3300006734|Ga0098073_1038629Not Available655Open in IMG/M
3300006790|Ga0098074_1028839All Organisms → Viruses → Predicted Viral1629Open in IMG/M
3300006790|Ga0098074_1179842All Organisms → Viruses531Open in IMG/M
3300006810|Ga0070754_10441797Not Available565Open in IMG/M
3300006870|Ga0075479_10104759All Organisms → Viruses → Predicted Viral1173Open in IMG/M
3300006916|Ga0070750_10315836All Organisms → Viruses665Open in IMG/M
3300007216|Ga0103961_1275341All Organisms → Viruses → Predicted Viral1354Open in IMG/M
3300007344|Ga0070745_1218212Not Available699Open in IMG/M
3300007344|Ga0070745_1323966Not Available545Open in IMG/M
3300007345|Ga0070752_1232016Not Available724Open in IMG/M
3300007345|Ga0070752_1333588Not Available572Open in IMG/M
3300007538|Ga0099851_1194469Not Available740Open in IMG/M
3300007539|Ga0099849_1091343All Organisms → Viruses → Predicted Viral1221Open in IMG/M
3300007539|Ga0099849_1235771Not Available677Open in IMG/M
3300007539|Ga0099849_1291873Not Available590Open in IMG/M
3300007541|Ga0099848_1102284All Organisms → Viruses → Predicted Viral1098Open in IMG/M
3300007541|Ga0099848_1185450Not Available753Open in IMG/M
3300007541|Ga0099848_1230976Not Available653Open in IMG/M
3300007541|Ga0099848_1333021All Organisms → Viruses515Open in IMG/M
3300007542|Ga0099846_1197018All Organisms → Viruses712Open in IMG/M
3300007542|Ga0099846_1306825All Organisms → Viruses543Open in IMG/M
3300007640|Ga0070751_1051316All Organisms → Viruses → Predicted Viral1808Open in IMG/M
3300007960|Ga0099850_1021443All Organisms → Viruses → Predicted Viral2864Open in IMG/M
3300007960|Ga0099850_1114360All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300007960|Ga0099850_1253543Not Available678Open in IMG/M
3300007960|Ga0099850_1289050Not Available624Open in IMG/M
3300007960|Ga0099850_1350526Not Available553Open in IMG/M
3300007960|Ga0099850_1370281Not Available534Open in IMG/M
3300009159|Ga0114978_10869480All Organisms → Viruses505Open in IMG/M
3300009169|Ga0105097_10827182All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes529Open in IMG/M
3300009170|Ga0105096_10077420All Organisms → Viruses → Predicted Viral1651Open in IMG/M
3300009466|Ga0126448_1069026Not Available804Open in IMG/M
3300009466|Ga0126448_1146857Not Available533Open in IMG/M
3300010296|Ga0129348_1210758Not Available659Open in IMG/M
3300010296|Ga0129348_1235611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales617Open in IMG/M
3300010296|Ga0129348_1324041All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium513Open in IMG/M
3300010299|Ga0129342_1221783Not Available666Open in IMG/M
3300010299|Ga0129342_1221947All Organisms → Viruses665Open in IMG/M
3300010299|Ga0129342_1229925Not Available651Open in IMG/M
3300010318|Ga0136656_1157573Not Available774Open in IMG/M
3300010354|Ga0129333_10209277Not Available1771Open in IMG/M
3300010354|Ga0129333_10255580All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1578Open in IMG/M
3300010354|Ga0129333_10672548Not Available892Open in IMG/M
3300010354|Ga0129333_10882314All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS2758Open in IMG/M
3300010354|Ga0129333_11362398Not Available584Open in IMG/M
3300010354|Ga0129333_11423000Not Available570Open in IMG/M
3300010354|Ga0129333_11679122Not Available517Open in IMG/M
3300010368|Ga0129324_10201441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales808Open in IMG/M
3300010370|Ga0129336_10541699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium625Open in IMG/M
3300010389|Ga0136549_10126626All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300010389|Ga0136549_10233467Not Available787Open in IMG/M
3300012953|Ga0163179_10063031Not Available2584Open in IMG/M
3300013087|Ga0163212_1189123Not Available645Open in IMG/M
(restricted) 3300013132|Ga0172372_10500835All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium804Open in IMG/M
3300013372|Ga0177922_10666232Not Available547Open in IMG/M
3300013372|Ga0177922_10979497Not Available748Open in IMG/M
3300017707|Ga0181363_1082417Not Available549Open in IMG/M
3300017716|Ga0181350_1065948Not Available936Open in IMG/M
3300017716|Ga0181350_1145493Not Available555Open in IMG/M
3300017747|Ga0181352_1029557All Organisms → Viruses → Predicted Viral1660Open in IMG/M
3300017761|Ga0181356_1060039Not Available1294Open in IMG/M
3300017777|Ga0181357_1186317Not Available748Open in IMG/M
3300017785|Ga0181355_1199352All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes787Open in IMG/M
3300017785|Ga0181355_1253656Not Available674Open in IMG/M
3300017986|Ga0181569_10727694Not Available655Open in IMG/M
3300018424|Ga0181591_10510329Not Available875Open in IMG/M
3300018682|Ga0188851_1006068All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl1715Open in IMG/M
3300019753|Ga0194010_1040927Not Available737Open in IMG/M
3300020074|Ga0194113_11157621Not Available507Open in IMG/M
3300020084|Ga0194110_10855757All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes545Open in IMG/M
3300020151|Ga0211736_10745400All Organisms → Viruses → Predicted Viral3359Open in IMG/M
3300020183|Ga0194115_10358350All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes642Open in IMG/M
3300020196|Ga0194124_10171091All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium1147Open in IMG/M
3300020196|Ga0194124_10390312Not Available640Open in IMG/M
3300020214|Ga0194132_10087346All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl2060Open in IMG/M
3300020221|Ga0194127_10924458Not Available529Open in IMG/M
3300020222|Ga0194125_10298074All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1070Open in IMG/M
3300021091|Ga0194133_10119357All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl1963Open in IMG/M
3300021376|Ga0194130_10626460Not Available530Open in IMG/M
3300021379|Ga0213864_10033492Not Available2404Open in IMG/M
3300021963|Ga0222712_10424945All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes802Open in IMG/M
3300022176|Ga0212031_1093771All Organisms → Viruses513Open in IMG/M
3300022187|Ga0196899_1043681Not Available1503Open in IMG/M
3300022190|Ga0181354_1200663Not Available594Open in IMG/M
3300022198|Ga0196905_1040070Not Available1369Open in IMG/M
3300022200|Ga0196901_1254918Not Available543Open in IMG/M
3300024357|Ga0255165_1024500Not Available1109Open in IMG/M
3300024481|Ga0256330_1088859Not Available653Open in IMG/M
3300025610|Ga0208149_1028503Not Available1544Open in IMG/M
3300025646|Ga0208161_1043738Not Available1482Open in IMG/M
3300025655|Ga0208795_1106279Not Available746Open in IMG/M
3300025655|Ga0208795_1159793All Organisms → Viruses555Open in IMG/M
3300025671|Ga0208898_1181330Not Available531Open in IMG/M
3300025674|Ga0208162_1085474All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium967Open in IMG/M
3300025759|Ga0208899_1126624Not Available909Open in IMG/M
3300025769|Ga0208767_1105660All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage SynMITS9220M011116Open in IMG/M
3300025815|Ga0208785_1155522Not Available520Open in IMG/M
3300025848|Ga0208005_1236105All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1564Open in IMG/M
3300025853|Ga0208645_1102562Not Available1181Open in IMG/M
3300025889|Ga0208644_1165152Not Available999Open in IMG/M
3300027114|Ga0208009_1032814Not Available1070Open in IMG/M
3300027138|Ga0255064_1044718All Organisms → Viruses708Open in IMG/M
3300027693|Ga0209704_1016297Not Available1844Open in IMG/M
3300027693|Ga0209704_1081733Not Available908Open in IMG/M
3300027804|Ga0209358_10068317All Organisms → Viruses → Predicted Viral2046Open in IMG/M
3300027816|Ga0209990_10238248All Organisms → Viruses832Open in IMG/M
3300027917|Ga0209536_102883247Not Available558Open in IMG/M
(restricted) 3300028114|Ga0247835_1258929Not Available560Open in IMG/M
3300029306|Ga0135212_1011610All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348793Open in IMG/M
3300029345|Ga0135210_1011179All Organisms → Viruses813Open in IMG/M
3300031539|Ga0307380_10950186Not Available692Open in IMG/M
3300031539|Ga0307380_10972231Not Available681Open in IMG/M
3300031539|Ga0307380_11263332Not Available567Open in IMG/M
3300031566|Ga0307378_10991182Not Available685Open in IMG/M
3300031566|Ga0307378_11317774Not Available562Open in IMG/M
3300031578|Ga0307376_10073673All Organisms → Viruses → Predicted Viral2438Open in IMG/M
3300031669|Ga0307375_10322909Not Available982Open in IMG/M
3300031669|Ga0307375_10648874Not Available615Open in IMG/M
3300031669|Ga0307375_10714386All Organisms → Viruses576Open in IMG/M
3300031673|Ga0307377_10326096Not Available1157Open in IMG/M
3300031673|Ga0307377_10834775All Organisms → Viruses634Open in IMG/M
3300031673|Ga0307377_10844252All Organisms → Viruses629Open in IMG/M
3300031746|Ga0315293_10204055All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1624Open in IMG/M
3300031787|Ga0315900_10855028Not Available618Open in IMG/M
3300031857|Ga0315909_10265520All Organisms → Viruses → Predicted Viral1307Open in IMG/M
3300031951|Ga0315904_10801020Not Available775Open in IMG/M
3300033557|Ga0316617_101955732Not Available601Open in IMG/M
3300033980|Ga0334981_0250929Not Available802Open in IMG/M
3300033981|Ga0334982_0279348Not Available793Open in IMG/M
3300033994|Ga0334996_0313721Not Available774Open in IMG/M
3300033994|Ga0334996_0476478Not Available565Open in IMG/M
3300034021|Ga0335004_0329062All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-H1892Open in IMG/M
3300034066|Ga0335019_0689961All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes587Open in IMG/M
3300034073|Ga0310130_0114107All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes816Open in IMG/M
3300034073|Ga0310130_0303844Not Available508Open in IMG/M
3300034103|Ga0335030_0526979All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium740Open in IMG/M
3300034109|Ga0335051_0334260Not Available728Open in IMG/M
3300034112|Ga0335066_0045871All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales2938Open in IMG/M
3300034116|Ga0335068_0194564Not Available1068Open in IMG/M
3300034119|Ga0335054_0765509Not Available512Open in IMG/M
3300034375|Ga0348336_019858All Organisms → Viruses → Predicted Viral3524Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous29.41%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient10.46%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.15%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.50%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil7.84%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake7.19%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.96%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.96%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.96%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.31%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.31%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor1.31%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment1.31%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond1.31%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.31%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water1.31%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.65%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.65%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.65%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.65%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.65%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.65%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.65%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.65%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.65%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001687Deep Marine Sediments WOR-3-8_10EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006639Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11EnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006734Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007216Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projectsEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009466Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018682Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1EnvironmentalOpen in IMG/M
3300019753Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_6-7_MGEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020196Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0mEnvironmentalOpen in IMG/M
3300020214Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80mEnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024357Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300024481Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025848Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027114Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)EnvironmentalOpen in IMG/M
3300027138Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300028114 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_13.5mEnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300029345Marine harbor viral communities from the Indian Ocean - SCH1EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033980Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034021Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057EnvironmentalOpen in IMG/M
3300034066Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034119Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1026116733300000116MarineMSNEKSPINFDKTIAGFNVTEHGIKSYSKSFSLGP
WOR8_1003080413300001687Marine SedimentMTQHKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQ
Ga0065861_115041823300004448MarineMTKKSPINFDKTVAGFNITERGVRSFTKSIQLGPFQITLNARDSGV
Ga0068876_1013587613300005527Freshwater LakeMTKDKSPINFDKTIAGFNITENGVKSYTKSFQLGPFQLTLNARDSGVRGS
Ga0075474_1013170613300006025AqueousMTKPKSSINFDRTIAGFNVTEHGVQSYSKSIKLGPLQLTINARGSGVRGSIS
Ga0075478_1015049633300006026AqueousMTNKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQV
Ga0075461_1024515123300006637AqueousMTKDKSPLNFDKTIAGFNVTERGIQSYTKSFQLGPFQL
Ga0079301_106154323300006639Deep SubsurfaceMTHKKSLISFDRTIHGVNITEHGVKSFTKSIKLGPLQLTLNANPN
Ga0075471_1064854813300006641AqueousMTQKKSPINFDKTIAGFNVTERGIKSFTKSIKLGPFQVTFNAR
Ga0098073_100586713300006734MarineMTKDKSPLNFDKTIAGFNVTERGIQSYTKSFQLGPF
Ga0098073_101932543300006734MarineMSQPKSPLNFDRTIGGFNITEHGVKSYTKSIKLGPFQ
Ga0098073_103862913300006734MarineMSDKSPINFDKTIAGFNITEHGVKSYTKSFQLGPIQFT
Ga0098074_102883913300006790MarineMTSERSAFNFDKTIAGLNITERGVKSYSKSIKLGPLQFTVNVRGSGIRG
Ga0098074_117984233300006790MarineMPDKKSPINFDKTIAGFNFTERGIKSYSKSFSLGPF
Ga0070754_1044179733300006810AqueousMTQHKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVTLNARGSGI
Ga0075479_1010475913300006870AqueousMTKPKSAINFDRTIAGFNVTEHGVQSYTKSIKLGPLQLTINARGSGVRGSI
Ga0070750_1031583613300006916AqueousMTKPKSTINFDRTIAGFNVTEHGVQSYTKSIKLGPLQLTINARGSG
Ga0103961_127534113300007216Freshwater LakeMTERSAFNFDRTIAGVNITEHGIKSFTKSIRLGPIQFTLNARKS
Ga0070745_121821213300007344AqueousMTQDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLT
Ga0070745_132396633300007344AqueousMTQDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTL
Ga0070752_123201633300007345AqueousMTKDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNA
Ga0070752_133358823300007345AqueousMTKPKSTINFDRTIAGFNVTEHGVQSYTKSIKLGPL
Ga0099851_119446933300007538AqueousMSQPKSPLNFDRTIGGFNITEHGVKSYTKSIKLGPFQLT
Ga0099849_109134343300007539AqueousMADKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVTLNARGS
Ga0099849_123577133300007539AqueousMTKDKSPINFDKTIAGFNVTERGIKSYSKSFSLGPFR
Ga0099849_129187313300007539AqueousMTDKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVTLNAR
Ga0099848_110228443300007541AqueousMTQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGV
Ga0099848_118545013300007541AqueousMAQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGVRGSIG
Ga0099848_123097623300007541AqueousMADKSFFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGV
Ga0099848_133302123300007541AqueousMTDKSSFNFDKTIAGFNITEHGIKSFSKSLKLGPFQITLNARESGIRGSIGI
Ga0099846_119701813300007542AqueousMTDKSSFNFDKTIAGFNITEHGIKSFSKSLKLGPFQITLNARESGI
Ga0099846_130682513300007542AqueousMTDKKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGVRGSI
Ga0070751_105131653300007640AqueousMTQDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNARESGVRGSIS
Ga0099850_102144393300007960AqueousMTEKSSFNFDKTIAGFNITEHGIKSFSKSLKLGPFQITLNARGS
Ga0099850_111436043300007960AqueousMAQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGVRGS
Ga0099850_125354333300007960AqueousMTDKKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGV
Ga0099850_128905013300007960AqueousMTEKSSFNFDKTIAGFNITEHGVKSYSKTIKLGPFQVTL
Ga0099850_135052623300007960AqueousMADKSFFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGVRGS
Ga0099850_137028123300007960AqueousMSQPKSPLNFDRTIGGFNITEHGVKSYTKSIKLGPFQLTLNAR
Ga0114978_1086948023300009159Freshwater LakeMTKKSIVNFDKTITGFNITERGVKSFTKSFKLGPFQLTLNA
Ga0105097_1082718213300009169Freshwater SedimentMTEKSPINFDKTIAGFNVTERGIKSFTKSIQLGPFQVTLNARESGVR
Ga0105096_1007742063300009170Freshwater SedimentMTDKSPINFDKTIAGFNLTEHGIKSFTKSIQLGPFQVTL
Ga0126448_106902633300009466Meromictic PondMTKDKSPLNFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNA
Ga0126448_114685713300009466Meromictic PondMSNEKSSINFDKTIAGFNVTERGIKSYSKSFSLGPFQ
Ga0129348_121075833300010296Freshwater To Marine Saline GradientMTDRKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGVRG
Ga0129348_123561113300010296Freshwater To Marine Saline GradientMTSERSAFNFDKTIAGLNITERGVKSYSKSIKLGPLQFTVNV
Ga0129348_132404113300010296Freshwater To Marine Saline GradientMTQKKSPINFDKTIAGFNITERGVKSYTKSFKLGPFQLTLNARDSGVR
Ga0129342_122178313300010299Freshwater To Marine Saline GradientMTQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSG
Ga0129342_122194733300010299Freshwater To Marine Saline GradientMTERSAFNFDKTIAGFSITERGIKSWSKSFKVGPFNLTLNA
Ga0129342_122992513300010299Freshwater To Marine Saline GradientMTQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFN
Ga0136656_115757313300010318Freshwater To Marine Saline GradientMTDKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQV
Ga0129333_1020927713300010354Freshwater To Marine Saline GradientMTKDKSPISFDKTIAGFNITENGIKSYSKSFQLGPFQFTVNARESGVRG
Ga0129333_1025558013300010354Freshwater To Marine Saline GradientMTDKSPINFDKTIAGFNITEHGIKSFTKSIQLGPFQVTLNARESG
Ga0129333_1067254813300010354Freshwater To Marine Saline GradientMTKKSPINFDRTIAGFNITEHGIKSYTKSFQLGPFQLTLNAK
Ga0129333_1088231413300010354Freshwater To Marine Saline GradientMTKDKLPINFDKTIAGFNITEHGIKSFTKSIQLGPFQVTLNARESG
Ga0129333_1136239833300010354Freshwater To Marine Saline GradientMTEKSSFNFDKTIAGFNITERGIKSFSKSLKLGPFQITLNARESGIRGSIGI
Ga0129333_1142300033300010354Freshwater To Marine Saline GradientMTKDKSPISFDKTIAGFNITENGIKSYSKSFQLGPFQFTVNARESGV
Ga0129333_1167912223300010354Freshwater To Marine Saline GradientMTRKSIINFDRTIHGVNITEHGIKSLTKAIKLGPFQVTLNANPNGVKG
Ga0129324_1020144113300010368Freshwater To Marine Saline GradientMTSERSAFNFDKTIAGLNITERGVKSYSKSIKLGPLQFTVNVRGS
Ga0129336_1054169933300010370Freshwater To Marine Saline GradientMTDKSPINFDKTIAGFNITEHGIKSFTKSIQLGPFQV
Ga0136549_1012662643300010389Marine Methane Seep SedimentVTQERSPLNFDKTIAGFNVTERGIQSYSKSFQLGPFQLTLNARE
Ga0136549_1023346713300010389Marine Methane Seep SedimentMTQDKSPINFDKTIAGFNVTERGVQSYTKSFQLGPFQLTLNARESGVRGS
Ga0163179_1006303113300012953SeawaterMPKRKRSAFNFDKTIFGVNVTERGPQSASKTIKLGPLSVTLNGRKSGVR
Ga0163212_118912313300013087FreshwaterMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLNARPSG
(restricted) Ga0172372_1050083513300013132FreshwaterMTERSAFNFDKTIAGVNVTEHGIKSFTKSIRLGPIQFTLNARPSGML
Ga0177922_1066623213300013372FreshwaterMTQKKSLINFDKTIAGFNITERGIKSYTKSIKLGPFQVTFNARESGVH
Ga0177922_1097949733300013372FreshwaterMTQKKSPINFDKTIAGFNITERGVKSYTKSIKLGPFQVTF
Ga0181363_108241723300017707Freshwater LakeVTKKSLISFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVN
Ga0181350_106594813300017716Freshwater LakeMTKPKSAFNFDKTIAGFNITENGIKSFTKTIQLGPLQLTFNT
Ga0181350_114549313300017716Freshwater LakeMTDKSPINFDKTVAGFNITERGVRSFTKSIQLGPFQITLNA
Ga0181352_102955753300017747Freshwater LakeMTKDKSPINFDKTIAGFNITEHGVKSYTKSIKLGPFQVTL
Ga0181356_106003943300017761Freshwater LakeMTKPKSAFNFDKVIAGFNITENGIKSFTKTIKVGPFQLTLNTRGTGIN
Ga0181357_118631713300017777Freshwater LakeMTKPKSAFNFDKTIAGFNITENGIKSFTKTIQLGPLQLT
Ga0181355_119935213300017785Freshwater LakeMTKPKSAFNFDKVIAGFNITENGIKSFTKTIKVGPFQLT
Ga0181355_125365613300017785Freshwater LakeMTRKSPLSFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVNASPNGVKGSVS
Ga0181569_1072769433300017986Salt MarshMTQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRG
Ga0181591_1051032933300018424Salt MarshMANKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVTLN
Ga0188851_100606853300018682Freshwater LakeMTKPKSPINFDRTIAGVNITENGIKSYTKSFKLGPFQLTLNARESGVLGS
Ga0194010_104092713300019753SedimentMTDKSSFNFDKTIAGFNITEHGVNSYSKSIKLGPFQVTLNARGS
Ga0194113_1115762123300020074Freshwater LakeMQTLPMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLNARPSGM
Ga0194110_1085575713300020084Freshwater LakeMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLN
Ga0211736_1074540013300020151FreshwaterMTKNKSPINFDRTIFGVNLTEHGIKSFTKSIQLGPFQVTLNARESGVRGSI
Ga0194115_1035835013300020183Freshwater LakeMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQ
Ga0194124_1017109113300020196Freshwater LakeMTKKSPINFDRTIAGFNITERGVKSYTKSIKLGPFQVTLNARQSGLHGS
Ga0194124_1039031213300020196Freshwater LakeMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLNARPSGMLGS
Ga0194132_1008734653300020214Freshwater LakeMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQF
Ga0194127_1092445823300020221Freshwater LakeMTDKSAFNFDRTIHGVNITEHGVKSFTKSIQLGPFQLTLNARKSGVLGS
Ga0194125_1029807433300020222Freshwater LakeMQTLPMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLNARPS
Ga0211614_1056974913300020471MarineMAKRKRSAFNFDKTIFGVNVTERGPQSLSKRIKLGPLS
Ga0194133_1011935753300021091Freshwater LakeMQTLPMTERSAFNFDKTIAGVNITERGIKSFTKSI
Ga0194130_1062646013300021376Freshwater LakeMTERSAFNFDKTIAGVNITERGIKSFTKSIRLGPIQFTLNARPSGMLG
Ga0213864_1003349213300021379SeawaterMTKPKSAINFDRTIAGFNVTEHGVQSYTKSIKLGPLQLTINARGSGVRGSIS
Ga0222712_1042494513300021963Estuarine WaterMIKKSIVNFDKTIAGFNITEHGVKSFTKSFKLGPFQLTLNARDSGVRGSIS
Ga0212031_109377123300022176AqueousMTDKSPLNFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGVRGSV
Ga0196899_104368133300022187AqueousMTKPKSTINFDRTIAGFNVTEHGVQSYTKSIKLGPLQLTIN
Ga0181354_120066323300022190Freshwater LakeMTKPKSAFNFDKVIAGFNITENGIKSFTKTIKVGP
Ga0196905_104007013300022198AqueousMTKDKSPLNFDRTIAGFNITENGIKSYTKSFQLGPFQLT
Ga0196901_125491813300022200AqueousMTKDKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGVRGSISI
Ga0255165_102450013300024357FreshwaterMTKKSLISFDRTIHGVNITEHGVKSLTKAVKLGPFQLTLNASP
Ga0256330_108885913300024481FreshwaterMTEKSPLNFDRTVAGFNITEHGIKSFTKSIKLGPLQLT
Ga0208149_102850353300025610AqueousMTQDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNARESGVRGSISI
Ga0208161_104373813300025646AqueousMTDKKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNA
Ga0208795_110627943300025655AqueousMTSERSAFNFDKTIAGLNITERGVKSYSKSIKLGPLQFTVN
Ga0208795_115979313300025655AqueousMTDKSPLNFDKTIAGFNVTERGIQSYTKSFQLGPFQLTLNARESGV
Ga0208898_118133013300025671AqueousMTQDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNARESG
Ga0208162_108547413300025674AqueousMTQKKSPINFDKTIAGFNITERGVKSYTKSFKLGPFQLTLNARDS
Ga0208899_112662413300025759AqueousMTDKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVT
Ga0208767_110566013300025769AqueousMTKPKSAINFDRTIAGFNVTEHGVQSYTKSIKLGPLQLTINARGSGV
Ga0208785_115552223300025815AqueousMTQHKSSFNFDKTVAGFNITERGIKSFSKGIKVGPFQITFNVRGSGVRGSV
Ga0208005_123610513300025848AqueousMTRKKSLISFDRTIHGVNITEHGIKSVTKQIKLGPFQLTVNANPNGIKGS
Ga0208645_110256213300025853AqueousMTKPKSTINFDRTIAGFNVTEHGVQSYTKSIKLGP
Ga0208644_116515243300025889AqueousMTKDKSPISFDKTIAGFNITENGIQSYSKSFQLGPFQLTL
Ga0208009_103281413300027114Deep SubsurfaceMTKPKAAFNFDKTIAGFNITENGIKSFTKTIQLGPLQLTLNTRESGVHASIA
Ga0255064_104471813300027138FreshwaterMTKKSIVNFDKTIAGFNITERGVKSYTKSFQLGPFQLTLNARD
Ga0209704_101629753300027693Freshwater SedimentVTKKSPISFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVNASSNGVK
Ga0209704_108173313300027693Freshwater SedimentMTRKSPLSFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVNASPNA
Ga0209358_1006831763300027804Freshwater LakeMTQKKSPINFDKTIAGFNITERGVKSYTKSIKLGPFQV
Ga0209990_1023824833300027816Freshwater LakeMTKDKSPINFDRTIFGVNLTEHGVKSYTKSFQLGPFQLTLNARDSGVRGSI
Ga0209536_10288324733300027917Marine SedimentMTKDKSPINFDKTIAGFNVTERGIQSYTKSFQLGPFPLTLNAR
(restricted) Ga0247835_125892913300028114FreshwaterMTKPKSAFNFDKTIAGFNITENGIKSFTKTIQLGPL
Ga0135212_101161023300029306Marine HarborMPRRKKSKVNFDKTIAGFNITEHGIKSYSKTIKLGPFQFTANINGSQARGSL
Ga0135210_101117943300029345Marine HarborMTRKRSAINFDKTIAGINFTERGPQSFSKSFKLGPFQLTLNASQ
Ga0307380_1095018613300031539SoilMTKKSPINFDRTIAGVNITENGIKSYTKSFKLGPFQL
Ga0307380_1097223113300031539SoilMTKPKSPINFDRTIAGVNITEHGIKSYTKSFQLGPFQLTLN
Ga0307380_1126333213300031539SoilMTKKSPLNFDKTIAGFNVTEHGVKSYTKSIKLGPFQVTLNARGSGMHGSIS
Ga0307378_1099118213300031566SoilMAKEKSPLNFDKTIAGFNVTEHGVKSYTKSIKLGPFQVTLNA
Ga0307378_1131777413300031566SoilMTKEKSPLNFDKTIAGFNVTEHGVKSYTKSIKLGPFQ
Ga0307376_1007367313300031578SoilMTDKSSFNFDKTIAGFNITEHGVKSYSKSIKLGPFQVTLNT
Ga0307375_1032290943300031669SoilMTKKSIVNFDKTIAGFNITERGVKSFTKSFKLGPFQLT
Ga0307375_1064887413300031669SoilMTKPKSPINFDRTIAGVNITENGIKSYTKSFKLGPFQLTLNGSDSGVHGSIS
Ga0307375_1071438623300031669SoilMTKPKSLINFDRTIAGVNITENGIKSYTKSFKLGPFQLTLNGSDSGVHGSI
Ga0307377_1032609643300031673SoilMTKEKSPLNFDKTIAGFNVTEHGVKSYTKSIKLGPFQVTLNARG
Ga0307377_1083477533300031673SoilMTKKSPINFDRTIAGVNITENGIKSYTKSFKLGPFQLTLNCSDSGVHGSI
Ga0307377_1084425213300031673SoilMDKSPLNFDKTIAGFNVTEHGVKSYTKSIKLGPFQLTLNARGSGVHG
Ga0315293_1020405563300031746SedimentMTKKSIVNFDKTIAGFNITERGVKSFTKSFKLGPFQL
Ga0315900_1085502833300031787FreshwaterMTKKSPISFDRTIHGVNITEHGIKSVSKQIKLGPFQL
Ga0315909_1026552013300031857FreshwaterMNNKSTFNFDRTIHGVNITEHGIKSYTKSIQLGPFQLTLNARKSGL
Ga0315904_1080102033300031951FreshwaterMTRKSPLSFDRTIHGVNITEHGIKSVSKQIKLGPFQ
Ga0316617_10195573223300033557SoilMNKSSFNFDKTIAGINITENGIKSITKSIKLGPFQLTVNGRRTGVRASISI
Ga0334981_0250929_3_1193300033980FreshwaterMTKKSPINFDRTIAGFNLTEHGIKSYTKSFKLGPLQLTL
Ga0334982_0279348_1_1413300033981FreshwaterMTQKKSPINFDKTIAGFNITERGVKSYTKSIKLGPFQVTFNARESGV
Ga0334996_0313721_1_1413300033994FreshwaterMTKKSPISFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVNASPNGVK
Ga0334996_0476478_1_1413300033994FreshwaterMTKRLPISFDRTIHGVNITEHGVKSYSKAVKLGPFQVTLNASPNGVK
Ga0335004_0329062_785_8923300034021FreshwaterMTKDKSPINFDKTIAGFNITEHGVKSYTKSIKLGPF
Ga0335019_0689961_461_5863300034066FreshwaterMTDKSPINFDKTIAGFNVTEHGIKSFTKSIQLGPFQVTLNAR
Ga0310130_0114107_2_1303300034073Fracking WaterMKKSHVSFDKTIGGFNITERGVRSYSKSIKLGPFQVTLNARAS
Ga0310130_0303844_2_1333300034073Fracking WaterMTKKSHVSFDKTIGGFNITERGVRSYSKSIKLGPFQVTLNARAS
Ga0335030_0526979_1_1383300034103FreshwaterMTKDKSPINFDKTIAGFNITEHGIKSFTKSIQLGPFQVTLNARKSG
Ga0335051_0334260_1_1113300034109FreshwaterMSNKKSHVSFDKTIAGFNVTERGVRSYSKSIKLGPLQ
Ga0335066_0045871_3_1253300034112FreshwaterMTKDKSPINFDKTIAGFNITEHGVKSYTKSIKLGPFQVTLN
Ga0335068_0194564_945_10673300034116FreshwaterMTDKSAFNFDRTIAGINITEHGIKSYTKSIQLGPFQLTLNA
Ga0335054_0765509_1_1473300034119FreshwaterMTKKSPISFDRTIHGVNITEHGIKSVSKQIKLGPFQLTVNVSPNGVKGS
Ga0348336_019858_1_1323300034375AqueousMTKDKSPINFDKTIAGFNVTEHGIKSYSKSFSLGPFQLTLNARE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.