Metagenome / Metatranscriptome Family F045191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	58 residues
Representative Sequence	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGTITGLASS
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.67 %
% of genes near scaffold ends (potentially truncated)	36.60 %
% of genes from short scaffolds (< 2000 bps)	84.97 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.379 % of family members)
Environment Ontology (ENVO)	Unclassified (33.987 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.52% β-sheet: 0.00% Coil/Unstructured: 34.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF07811	TadE	45.74
PF08666	SAF	4.65
PF16976	RcpC	3.10
PF13629	T2SS-T3SS_pil_N	2.33
PF00155	Aminotran_1_2	1.55
PF13400	Tad	0.78
PF00989	PAS	0.78
PF13614	AAA_31	0.78
PF13426	PAS_9	0.78
PF00180	Iso_dh	0.78
PF00437	T2SSE	0.78
PF00561	Abhydrolase_1	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.13 %
Unclassified	root	N/A	39.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.13 %
Unclassified	root	N/A	39.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.13 %
Unclassified	root	N/A	39.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.87 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	26.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	26.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.87 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	21.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.87 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	21.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.87 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	21.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.92 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01DAZYQ	Not Available	742	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0889123	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0889123	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0889140	Not Available	2477	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100846350	All Organisms → cellular organisms → Bacteria	6963	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100846350	All Organisms → cellular organisms → Bacteria	6963	Open in IMG/M
3300000443\|F12B_12161660	Not Available	738	Open in IMG/M
3300000891\|JGI10214J12806_12286565	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300004114\|Ga0062593_102554982	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300004114\|Ga0062593_102554982	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300004156\|Ga0062589_101029052	Not Available	772	Open in IMG/M
3300004156\|Ga0062589_101366257	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300004156\|Ga0062589_102825355	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300004157\|Ga0062590_100150326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300004463\|Ga0063356_103130630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300004479\|Ga0062595_100045415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1961	Open in IMG/M
3300004479\|Ga0062595_100045415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1961	Open in IMG/M
3300004479\|Ga0062595_100596249	Not Available	859	Open in IMG/M
3300004480\|Ga0062592_100535440	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004480\|Ga0062592_100535440	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004480\|Ga0062592_100535440	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004480\|Ga0062592_101476471	Not Available	651	Open in IMG/M
3300005093\|Ga0062594_101426288	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300005093\|Ga0062594_101694688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	660	Open in IMG/M
3300005294\|Ga0065705_11047082	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005295\|Ga0065707_10618466	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005332\|Ga0066388_101022439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1388	Open in IMG/M
3300005332\|Ga0066388_102494497	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300005336\|Ga0070680_100459556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1088	Open in IMG/M
3300005353\|Ga0070669_100693466	Not Available	859	Open in IMG/M
3300005406\|Ga0070703_10126079	Not Available	935	Open in IMG/M
3300005440\|Ga0070705_100017121	All Organisms → cellular organisms → Bacteria	3778	Open in IMG/M
3300005440\|Ga0070705_101437764	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300005441\|Ga0070700_100341890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1106	Open in IMG/M
3300005441\|Ga0070700_100341890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1106	Open in IMG/M
3300005444\|Ga0070694_100107378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1984	Open in IMG/M
3300005444\|Ga0070694_100304223	All Organisms → cellular organisms → Bacteria → Proteobacteria	1223	Open in IMG/M
3300005471\|Ga0070698_100294859	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300005471\|Ga0070698_101274623	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300005518\|Ga0070699_101796675	Not Available	561	Open in IMG/M
3300005549\|Ga0070704_100089817	All Organisms → cellular organisms → Bacteria → Proteobacteria	2286	Open in IMG/M
3300005549\|Ga0070704_100332792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300005549\|Ga0070704_100332792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300005713\|Ga0066905_100041661	All Organisms → cellular organisms → Bacteria → Proteobacteria	2728	Open in IMG/M
3300005843\|Ga0068860_101049045	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300005937\|Ga0081455_10412293	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300006196\|Ga0075422_10016026	All Organisms → cellular organisms → Bacteria → Proteobacteria	2502	Open in IMG/M
3300006844\|Ga0075428_100253783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300006844\|Ga0075428_101877894	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300006845\|Ga0075421_100521513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1408	Open in IMG/M
3300006845\|Ga0075421_100743236	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300006845\|Ga0075421_100743236	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300006847\|Ga0075431_101340520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300006852\|Ga0075433_10015092	All Organisms → cellular organisms → Bacteria → Proteobacteria	6326	Open in IMG/M
3300006969\|Ga0075419_10537822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	815	Open in IMG/M
3300007004\|Ga0079218_12789244	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009094\|Ga0111539_11734677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300009094\|Ga0111539_11734677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300009100\|Ga0075418_10190542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2184	Open in IMG/M
3300009148\|Ga0105243_11671054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300009156\|Ga0111538_12285029	Not Available	679	Open in IMG/M
3300009162\|Ga0075423_10653556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1109	Open in IMG/M
3300009162\|Ga0075423_11199520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300009176\|Ga0105242_10275728	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300009553\|Ga0105249_10200236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1954	Open in IMG/M
3300009553\|Ga0105249_10339380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1519	Open in IMG/M
3300010043\|Ga0126380_10996060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300010047\|Ga0126382_10770359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	816	Open in IMG/M
3300010397\|Ga0134124_11047688	Not Available	830	Open in IMG/M
3300010398\|Ga0126383_12992291	Not Available	552	Open in IMG/M
3300010399\|Ga0134127_10723905	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300010399\|Ga0134127_10820022	Not Available	980	Open in IMG/M
3300010400\|Ga0134122_10209995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1620	Open in IMG/M
3300010401\|Ga0134121_10124126	Not Available	2183	Open in IMG/M
3300010403\|Ga0134123_10578977	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300010403\|Ga0134123_11224785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300012929\|Ga0137404_10008012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7214	Open in IMG/M
3300012930\|Ga0137407_10421721	Not Available	1238	Open in IMG/M
3300012930\|Ga0137407_10421721	Not Available	1238	Open in IMG/M
3300012948\|Ga0126375_10597444	Not Available	842	Open in IMG/M
3300013297\|Ga0157378_12100208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300013308\|Ga0157375_11915463	Not Available	704	Open in IMG/M
3300014326\|Ga0157380_12715944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300015264\|Ga0137403_10001091	All Organisms → cellular organisms → Bacteria	34389	Open in IMG/M
3300015371\|Ga0132258_11721001	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1581	Open in IMG/M
3300015371\|Ga0132258_11721001	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1581	Open in IMG/M
3300015373\|Ga0132257_100000012	All Organisms → cellular organisms → Bacteria	80563	Open in IMG/M
3300015373\|Ga0132257_100008709	All Organisms → cellular organisms → Bacteria	10043	Open in IMG/M
3300018027\|Ga0184605_10171100	Not Available	982	Open in IMG/M
3300018028\|Ga0184608_10188808	Not Available	900	Open in IMG/M
3300018076\|Ga0184609_10351704	Not Available	688	Open in IMG/M
3300018422\|Ga0190265_10213852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1950	Open in IMG/M
3300018422\|Ga0190265_10213852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1950	Open in IMG/M
3300018422\|Ga0190265_11097135	Not Available	916	Open in IMG/M
3300018422\|Ga0190265_11097135	Not Available	916	Open in IMG/M
3300018422\|Ga0190265_12701023	Not Available	593	Open in IMG/M
3300019249\|Ga0184648_1413161	Not Available	824	Open in IMG/M
3300019255\|Ga0184643_1071273	Not Available	1306	Open in IMG/M
3300019255\|Ga0184643_1071273	Not Available	1306	Open in IMG/M
3300019259\|Ga0184646_1614008	Not Available	551	Open in IMG/M
3300019269\|Ga0184644_1500043	Not Available	543	Open in IMG/M
3300019279\|Ga0184642_1096694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300019279\|Ga0184642_1096694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300019279\|Ga0184642_1347117	Not Available	503	Open in IMG/M
3300019377\|Ga0190264_11925651	Not Available	538	Open in IMG/M
3300020004\|Ga0193755_1020120	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2204	Open in IMG/M
3300021080\|Ga0210382_10281195	Not Available	731	Open in IMG/M
3300021080\|Ga0210382_10281195	Not Available	731	Open in IMG/M
3300022195\|Ga0222625_1586132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300025885\|Ga0207653_10223862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300025911\|Ga0207654_10631114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300025913\|Ga0207695_11118776	Not Available	667	Open in IMG/M
3300025917\|Ga0207660_11053529	Not Available	663	Open in IMG/M
3300025935\|Ga0207709_10990210	Not Available	687	Open in IMG/M
3300025938\|Ga0207704_11991837	Not Available	500	Open in IMG/M
3300025961\|Ga0207712_10350515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1227	Open in IMG/M
3300025961\|Ga0207712_10351611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1225	Open in IMG/M
3300026075\|Ga0207708_11758619	Not Available	544	Open in IMG/M
3300026089\|Ga0207648_10290908	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300026285\|Ga0209438_1086542	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300027815\|Ga0209726_10363776	Not Available	684	Open in IMG/M
3300027876\|Ga0209974_10426188	Not Available	524	Open in IMG/M
3300027907\|Ga0207428_10290599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1211	Open in IMG/M
3300027907\|Ga0207428_10290599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1211	Open in IMG/M
3300027909\|Ga0209382_10399464	Not Available	1531	Open in IMG/M
3300027909\|Ga0209382_10399464	Not Available	1531	Open in IMG/M
3300027909\|Ga0209382_10720064	Not Available	1071	Open in IMG/M
3300027909\|Ga0209382_10720064	Not Available	1071	Open in IMG/M
3300028381\|Ga0268264_10609454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300028381\|Ga0268264_10609454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300030546\|Ga0247646_1198304	Not Available	574	Open in IMG/M
3300030553\|Ga0247645_1123495	Not Available	623	Open in IMG/M
3300030570\|Ga0247647_1097723	Not Available	722	Open in IMG/M
3300030574\|Ga0247648_1206013	Not Available	512	Open in IMG/M
3300030682\|Ga0247622_1145249	Not Available	569	Open in IMG/M
3300030682\|Ga0247622_1145249	Not Available	569	Open in IMG/M
3300030683\|Ga0247621_1123885	Not Available	611	Open in IMG/M
3300030904\|Ga0308198_1046753	Not Available	662	Open in IMG/M
3300031093\|Ga0308197_10076274	Not Available	936	Open in IMG/M
3300031094\|Ga0308199_1050770	Not Available	810	Open in IMG/M
3300031094\|Ga0308199_1097421	Not Available	643	Open in IMG/M
3300031114\|Ga0308187_10147697	Not Available	781	Open in IMG/M
3300031114\|Ga0308187_10217844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300031114\|Ga0308187_10217844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300031422\|Ga0308186_1022567	Not Available	615	Open in IMG/M
3300031716\|Ga0310813_10025589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4098	Open in IMG/M
3300031716\|Ga0310813_10025589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4098	Open in IMG/M
3300033475\|Ga0310811_10153205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2896	Open in IMG/M
3300034662\|Ga0314783_108427	Not Available	600	Open in IMG/M
3300034674\|Ga0314799_042678	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.63%
Host-Associated	Host-Associated	30.72%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.82%
Plants	Host-Associated → Plants	30.72%
Aquatic	Environmental → Aquatic	9.80%
Solid Waste	Engineered → Solid Waste	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.88%
Freshwater	Environmental → Aquatic → Freshwater	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.84%
Sediment	Environmental → Aquatic → Sediment	1.96%
Grass	Engineered → Solid Waste → Grass	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.22%
Loam	Environmental → Terrestrial → Soil → Loam	14.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%
Composting	Engineered → Solid Waste → Grass → Composting	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.31%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	10.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	7.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.31%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030553	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030682	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030683	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034674	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_01391300	2170459015	Switchgrass, Maize And Mischanthus Litter	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGSRISGL
ICChiseqgaiiDRAFT_08891234	3300000033	Soil	MFKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGTSITGLASS
ICChiseqgaiiDRAFT_08891235	3300000033	Soil	VFKTAWSYVSDERGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTMSGLASS
ICChiseqgaiiDRAFT_08891405	3300000033	Soil	VLKTICSYVSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLSAAVNAIGGTITGLASS
INPhiseqgaiiFebDRAFT_1008463504	3300000364	Soil	MKRLIGYFKDXRGVETLEWIVVGALIVAVGIAVYQGALQTQLIAAVNAIGGRISGLASS*
INPhiseqgaiiFebDRAFT_1008463505	3300000364	Soil	VLKTICSYMSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLXXAXNAIGGTITGLASS
F12B_121616602	3300000443	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGTRISGLGSS*
JGI10214J12806_122865653	3300000891	Soil	MLKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGTSITGLASS
Ga0062593_1025286972	3300004114	Soil	GVETLEWIVVGALIVAIAIAIYPGSLQTQLTTTINAIGGTMTGLASS*
Ga0062593_1025549821	3300004114	Soil	MFKKAWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGTSITGLASS
Ga0062593_1025549822	3300004114	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVTAVNAIGSRISGLASS*
Ga0062589_1010290522	3300004156	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGSRISGLASS*
Ga0062589_1013662571	3300004156	Soil	VFKTAWSYVSNERGVETLEWIVVGALIVAIAIAIYPGSLQTQLTTTINAIGGTMTGLASS
Ga0062589_1028253551	3300004156	Soil	VFKAIWSNVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTISGLASS
Ga0062590_1001503262	3300004157	Soil	VLKTIWSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQSQLTTAINAIGGTLSGLASS
Ga0063356_1031306302	3300004463	Arabidopsis Thaliana Rhizosphere	VFKTAWPYVSNERGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTMTGLASS
Ga0062595_1000454152	3300004479	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQTQLIAAVNAIGGRISGLASS*
Ga0062595_1000454153	3300004479	Soil	VLKTICSYVSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTITGLASS
Ga0062595_1005962491	3300004479	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVTAVNAIGGRISGLASS*
Ga0062592_1005354402	3300004480	Soil	VFKTIWSCVRNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS
Ga0062592_1005354403	3300004480	Soil	VFKAIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTISGLASS
Ga0062592_1005354404	3300004480	Soil	KDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGRISGLASS*
Ga0062592_1014764711	3300004480	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLIAAVNAIGGRI
Ga0062594_1014262881	3300005093	Soil	VFKTAWSYVSDERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTAINAIGGTVTGLASS
Ga0062594_1016946883	3300005093	Soil	PRRRIPIKGEERVFKAIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTISGLASS*
Ga0065705_110470821	3300005294	Switchgrass Rhizosphere	PRWATSDQGEEDSVFKTVWSYLSNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS*
Ga0065707_106184662	3300005295	Switchgrass Rhizosphere	VFKTIWSCVRNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINSIGGTVTGLASS
Ga0066388_1010224392	3300005332	Tropical Forest Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLTQAVNAIGGQITGLASS*
Ga0066388_1024944971	3300005332	Tropical Forest Soil	SYVRDERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGSTVTGLASS*
Ga0070680_1004595563	3300005336	Corn Rhizosphere	VFKTVWSYVSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS
Ga0070669_1006934661	3300005353	Switchgrass Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNI
Ga0070703_101260791	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGRISGLASS*
Ga0070705_1000171213	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNAIGGSITGLASS
Ga0070705_1014377642	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VFKTVWSYVSDERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTAINAIGGTVTGLASS
Ga0070700_1003418902	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQTQLTAAVNAIGGQISGLASS*
Ga0070700_1003418903	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VFKTVWSYVSDERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTAINAIGGTVTG
Ga0070694_1001073782	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLIGYLKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGTISGLASS*
Ga0070694_1003042231	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTVTGLASS*
Ga0070698_1002948593	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS*
Ga0070698_1012746232	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VFKTAWSYVSNERGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTMSGLASS
Ga0070699_1017966751	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS*
Ga0070704_1000898171	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VWRNERGIETLEWIVVGALIVALGAAVYNGALNAQLTAAVNAIGTRIVGLAG*
Ga0070704_1003327922	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS*
Ga0070704_1003327923	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VLKTVWSYVSNERGVETLEWIVVGALIVAIGIAIYPGTLQNQLTTAINAIGVTVTGLASS
Ga0070702_1010507972	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS*
Ga0066905_1000416611	3300005713	Tropical Forest Soil	VRDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS*
Ga0068860_1010490453	3300005843	Switchgrass Rhizosphere	VFKTAWSYVSNEHGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTVTGLA
Ga0081455_104122932	3300005937	Tabebuia Heterophylla Rhizosphere	VGIPKEESNVLKTIGSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS*
Ga0075422_100160262	3300006196	Populus Rhizosphere	VLKTIWLYVGDERGVETLEWIVVGALIVAIGIAVYPGTLQSQLTTAINAIGGTLSGLASS
Ga0075428_1002537834	3300006844	Populus Rhizosphere	ERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS*
Ga0075428_1018778942	3300006844	Populus Rhizosphere	DERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGTTVTGLASS*
Ga0075421_1005215133	3300006845	Populus Rhizosphere	VETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGTTVTGLASS*
Ga0075421_1007432362	3300006845	Populus Rhizosphere	VFKTAWSYINDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGSQVTGLASS
Ga0075421_1007432363	3300006845	Populus Rhizosphere	MKRLIGYVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS*
Ga0075431_1013405202	3300006847	Populus Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLTSAVNAIGGQITGLASS*
Ga0075433_100150926	3300006852	Populus Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLIAAVNAIGGRISGLASS*
Ga0075420_1003620853	3300006853	Populus Rhizosphere	WIVVGALIVAIGIAIYPGTLQTQLTTAINAIGTTVTGLASS*
Ga0075419_105378221	3300006969	Populus Rhizosphere	VLKTIWLYVGDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLS
Ga0079218_127892442	3300007004	Agricultural Soil	VFKTVWTYVSNERGVETLEWIVVGALIVAIGIAVYPSTLQTQLIGAMNTIGSTVTGLASS
Ga0111539_117346772	3300009094	Populus Rhizosphere	VSDERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGTTVTGLASS*
Ga0111539_117346773	3300009094	Populus Rhizosphere	GYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLTSAVNAIGGQITGLASS*
Ga0075418_101905423	3300009100	Populus Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGARISGLASS*
Ga0105243_116710543	3300009148	Miscanthus Rhizosphere	RGISHQRKEVSMFKKAWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNAIGGSITGLASS*
Ga0111538_122850293	3300009156	Populus Rhizosphere	YVRDERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGTTVTGLASS*
Ga0075423_106535561	3300009162	Populus Rhizosphere	IWSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQSQLTTAINAIGGTLSGLASS*
Ga0075423_111995203	3300009162	Populus Rhizosphere	RLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLTSAVNAIGGQITGLASS*
Ga0105242_102757281	3300009176	Miscanthus Rhizosphere	TVWSYVSDERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTAINAIGGTVTGLASS*
Ga0105249_102002363	3300009553	Switchgrass Rhizosphere	MLKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVAAVNAIGGSITGLASS
Ga0105249_103393801	3300009553	Switchgrass Rhizosphere	VSNERGVETLEWIVVGALIVAIGIAIYPGTLQNQLTTAINAIGVTVTGLASS*
Ga0126380_109960601	3300010043	Tropical Forest Soil	VLKTIGSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS
Ga0126382_107703593	3300010047	Tropical Forest Soil	GFQGEEPNVLKTIRSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS*
Ga0134124_110476883	3300010397	Terrestrial Soil	DERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTAAINSIGGTLTGLASS*
Ga0126383_129922911	3300010398	Tropical Forest Soil	PRRGRPESLRGARAGTSREEPNVLKTIWSSVSDERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGSTVTGLASS*
Ga0134127_107239053	3300010399	Terrestrial Soil	KPPARGIQTTGGSVFKTAWSYVSNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS*
Ga0134127_108200223	3300010399	Terrestrial Soil	VLKTIWWYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQSQLTTAINAIGGTLSGLASS
Ga0134122_102099952	3300010400	Terrestrial Soil	VSDERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTAINAIGGTVTGLASS*
Ga0134121_101241261	3300010401	Terrestrial Soil	VFKAIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTIS
Ga0134123_105789773	3300010403	Terrestrial Soil	RGISNQRGEEGVFKTIWSCVRNEHGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS*
Ga0134123_112247851	3300010403	Terrestrial Soil	VFKTAWSYVSNERGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTMTGLASS
Ga0137404_100080125	3300012929	Vadose Zone Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGRISGLASS*
Ga0137407_104217213	3300012930	Vadose Zone Soil	VSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS*
Ga0137407_104217214	3300012930	Vadose Zone Soil	MFKTVWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGQITGLASS
Ga0126375_105974442	3300012948	Tropical Forest Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNNIGSRISGLASS*
Ga0157378_121002081	3300013297	Miscanthus Rhizosphere	RLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQTQLTAAVNAIGGQISGLASS*
Ga0157375_119154631	3300013308	Miscanthus Rhizosphere	TAWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGGTISGLASS*
Ga0157380_127159441	3300014326	Switchgrass Rhizosphere	KTIWSCVRNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS*
Ga0137403_100010919	3300015264	Vadose Zone Soil	VFKTVWSYVSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS
Ga0132258_117210012	3300015371	Arabidopsis Rhizosphere	MIARLIGRLADERGVETLEWIVVGALIVAVAIAVYPGTLQTQLTGAVTSIGGTITGLSSS
Ga0132258_117210013	3300015371	Arabidopsis Rhizosphere	MRKLMDKIGFHLQDEQGVETLEWIVVGALIVAVGIAVYQGVLQGQLTTAVTNIGGTISGLSSS*
Ga0132257_1000000122	3300015373	Arabidopsis Rhizosphere	VLKTIWSRVSDERGVETLEWIVVGALIVAIGIAVYPGSLQSQLTAAINSIGTTVTGLASS
Ga0132257_1000087091	3300015373	Arabidopsis Rhizosphere	KDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGSRISGLASS*
Ga0184605_101711002	3300018027	Groundwater Sediment	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLVSAVNAIGGTITGLASS
Ga0184608_101888082	3300018028	Groundwater Sediment	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGRISGLASS
Ga0184609_103517042	3300018076	Groundwater Sediment	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVSAVNAIGGTITGLASS
Ga0190265_102138524	3300018422	Soil	VFKTAWSYMHDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGSQVTGLASS
Ga0190265_102138525	3300018422	Soil	YVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS
Ga0190265_110971352	3300018422	Soil	VFKTVWTYVNNERGVETLEWIIVGALIVGIGIAVYPGTLQTQLSTAINTIGTTVTGLASS
Ga0190265_110971353	3300018422	Soil	YVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNTIGGTIQGLASS
Ga0190265_127010231	3300018422	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLTAAVNAIGGQISGLASS
Ga0184648_14131611	3300019249	Groundwater Sediment	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGRISGLASS
Ga0184643_10712732	3300019255	Groundwater Sediment	VFKTVWSYVNDERGVETLEWIVVGALIVAIGIAIYPGMVQTQLTNAINAVGGTVTGLASS
Ga0184643_10712733	3300019255	Groundwater Sediment	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGTITGLASS
Ga0184646_16140082	3300019259	Groundwater Sediment	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTITGLASS
Ga0184644_15000432	3300019269	Groundwater Sediment	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNAIG
Ga0184642_10966941	3300019279	Groundwater Sediment	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNTIGGTIQGLASS
Ga0184642_10966942	3300019279	Groundwater Sediment	VFKTAWSYVSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS
Ga0184642_13471171	3300019279	Groundwater Sediment	MFKTIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVSAVNAIGGTITGLASS
Ga0190264_119256511	3300019377	Soil	MKRLIGYVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAI
Ga0193755_10201203	3300020004	Soil	VFKTVWSYVSDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLTGLASS
Ga0210382_102811952	3300021080	Groundwater Sediment	VFKTAWSYVNDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS
Ga0210382_102811953	3300021080	Groundwater Sediment	FKTIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVSAVNAIGGTITGLASS
Ga0222625_15861321	3300022195	Groundwater Sediment	VFKTVWSYLSDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVNGLASS
Ga0207653_102238622	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VFKTAWSYVSNERGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTVTGLASS
Ga0207654_106311143	3300025911	Corn Rhizosphere	EASMLKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNAIGGSITGLASS
Ga0207695_111187762	3300025913	Corn Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGSRISGLASS
Ga0207660_110535292	3300025917	Corn Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQTQLTAAVNAIGGQISGLASS
Ga0207709_109902101	3300025935	Miscanthus Rhizosphere	EERVFKAIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTISGLASS
Ga0207704_119918371	3300025938	Miscanthus Rhizosphere	IPIKEEDRVFKAIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGGTISGLASS
Ga0207712_103505153	3300025961	Switchgrass Rhizosphere	YVSNERGVETLEWIVVGALIVAIGIAIYPGTLQNQLTTAINAIGVTVTGLASS
Ga0207712_103516113	3300025961	Switchgrass Rhizosphere	MLKKTWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVSAIGGSITGLASS
Ga0207708_117586192	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MFKKAWSYVNDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVTAVNAIGGRISGLASS
Ga0207648_102909083	3300026089	Miscanthus Rhizosphere	NQRGEEGVFKTIWSCVRNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGGTVTGLASS
Ga0209438_10865421	3300026285	Grasslands Soil	IWSYVNDERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS
Ga0209726_103637762	3300027815	Groundwater	MTIGRIRGDERGIETIEWIVVGALIVATAIVVYPAALGGDLTTAMSAIGSTLIGLAG
Ga0209974_104261881	3300027876	Arabidopsis Thaliana Rhizosphere	SGFPREEPNVLKTIRVYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTAAINSIGGTLTGLASS
Ga0207428_102905991	3300027907	Populus Rhizosphere	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNNIGARISGLASS
Ga0207428_102905992	3300027907	Populus Rhizosphere	VLKTIWLYVGDERGVETLEWIVVGALIVAIGIAVYPGTLQTQLTTAINAIGGTLSGLASS
Ga0209382_103994642	3300027909	Populus Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS
Ga0209382_103994643	3300027909	Populus Rhizosphere	VFKTAWSYVSNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTNAINAIGGTVTGLASS
Ga0209382_107200642	3300027909	Populus Rhizosphere	VFKTAWSYVNNERGVETLEWIVVGALIVAIGIAIYPGTLQTQLTTAINAIGTTVTGLASS
Ga0209382_107200643	3300027909	Populus Rhizosphere	MKRLIGYVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS
Ga0268264_106094542	3300028381	Switchgrass Rhizosphere	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVTAVNAIGGRISGLASS
Ga0268264_106094544	3300028381	Switchgrass Rhizosphere	VFKTAWSYVSNEHGVETLEWIVVGALIVAIAIAVYPGSLQTQLTTTINAIGGTMTGLASS
Ga0247646_11983041	3300030546	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLVTAVNAIGGRISGLASS
Ga0247645_11234951	3300030553	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGGRISGLASS
Ga0247647_10977232	3300030570	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQTQLVAAVNAIGGRISGLASS
Ga0247648_12060131	3300030574	Soil	MKRLIGYVKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGRISGLASS
Ga0247622_11452491	3300030682	Soil	KEKRMKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGGRISGLASS
Ga0247622_11452492	3300030682	Soil	VFKTAWLYVSNERGVETLEWIVVGALIVAIGIAVYPATLQTQLTNAINAIGGTVTGLASS
Ga0247621_11238853	3300030683	Soil	RLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGGRISGLASS
Ga0308198_10467531	3300030904	Soil	MFKTIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGRISGLASS
Ga0308197_100762743	3300031093	Soil	MFKTIWSYVNDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGSITGLASS
Ga0308199_10507702	3300031094	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGSITGLASS
Ga0308199_10974212	3300031094	Soil	MKRLIGYVKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNTIGGTIQGLASS
Ga0308187_101476971	3300031114	Soil	MKRLIGYFRDERGVETLEWIVVGALIVAVGIAVYQGALQSQLVTAVNAIGGRISGLASS
Ga0308187_102178442	3300031114	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQSQLITAVNAIGGSITGLASS
Ga0308187_102178443	3300031114	Soil	VFKTAWSYVSNERGVETLEWIVVGALIVAIGIAVYPGSLQTQLTTTINAIGGTVTGLASS
Ga0308186_10225671	3300031422	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLITAVNAIGGRISG
Ga0310813_100255892	3300031716	Soil	VLKTIRVYVRDERGVETLEWIVVGALIVAIGIAVYPGTLHTQLTAAINSIGGTLTGLASS
Ga0310813_100255893	3300031716	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYQGALQGQLITAVNAIGTRISGLASS
Ga0310811_101532051	3300033475	Soil	GLQGEEPTVLKTIWSYVRDERGVETLEWIVVGALIVAIGIAVYPGTLQSQLTTAINAIGGTLSGLASS
Ga0314783_108427_448_600	3300034662	Soil	MKRLIGYFKDERGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGS
Ga0314799_042678_68_247	3300034674	Soil	MKRLIGYFKDQRGVETLEWIVVGALIVAVGIAVYTGALQGQLVTAVNAIGSRISGLASS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences