Metagenome / Metatranscriptome Family F045225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045225
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	95 residues
Representative Sequence	MLVTQTSAVEEENDFNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRVAQYR
Number of Associated Samples	103
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.92 %
% of genes near scaffold ends (potentially truncated)	32.03 %
% of genes from short scaffolds (< 2000 bps)	79.08 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.928 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.366 % of family members)
Environment Ontology (ENVO)	Unclassified (52.941 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.588 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.24% β-sheet: 0.00% Coil/Unstructured: 48.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF00593	TonB_dep_Rec	10.46
PF00664	ABC_membrane	3.92
PF07715	Plug	3.92
PF03315	SDH_beta	1.31
PF00311	PEPcase	1.31
PF00326	Peptidase_S9	0.65
PF07676	PD40	0.65
PF00480	ROK	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	1.31
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.31
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	1.31

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.93 %
Unclassified	root	N/A	13.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.93 %
Unclassified	root	N/A	13.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.93 %
Unclassified	root	N/A	13.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.27 %
Unclassified	root	N/A	13.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	31.37 %
Unclassified	root	N/A	13.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.07 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.07 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1010534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300001546\|JGI12659J15293_10050337	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300001593\|JGI12635J15846_10015588	All Organisms → cellular organisms → Bacteria → Proteobacteria	6321	Open in IMG/M
3300001593\|JGI12635J15846_10383307	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300001661\|JGI12053J15887_10410437	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300002245\|JGIcombinedJ26739_100236408	All Organisms → cellular organisms → Bacteria → Proteobacteria	1717	Open in IMG/M
3300002245\|JGIcombinedJ26739_101552959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	558	Open in IMG/M
3300004080\|Ga0062385_11146901	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300004092\|Ga0062389_101817333	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300004103\|Ga0058903_1412474	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300004104\|Ga0058891_1587432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	881	Open in IMG/M
3300004635\|Ga0062388_102024180	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005591\|Ga0070761_10231842	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300005602\|Ga0070762_10002055	All Organisms → cellular organisms → Bacteria → Proteobacteria	9437	Open in IMG/M
3300005602\|Ga0070762_10009723	All Organisms → cellular organisms → Bacteria → Proteobacteria	4795	Open in IMG/M
3300005921\|Ga0070766_10328534	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300005952\|Ga0080026_10090720	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300005994\|Ga0066789_10080378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1409	Open in IMG/M
3300006176\|Ga0070765_100418325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1253	Open in IMG/M
3300006176\|Ga0070765_101079830	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300006638\|Ga0075522_10121942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385	Open in IMG/M
3300009633\|Ga0116129_1023025	All Organisms → cellular organisms → Bacteria → Proteobacteria	2156	Open in IMG/M
3300010396\|Ga0134126_11683973	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300010864\|Ga0126357_1237912	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300011120\|Ga0150983_11004435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1344	Open in IMG/M
3300012683\|Ga0137398_10892076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	620	Open in IMG/M
3300014501\|Ga0182024_11103936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	936	Open in IMG/M
3300015206\|Ga0167644_1084304	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300020021\|Ga0193726_1000005	All Organisms → cellular organisms → Bacteria → Proteobacteria	784561	Open in IMG/M
3300020021\|Ga0193726_1151230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1011	Open in IMG/M
3300020034\|Ga0193753_10369809	Not Available	587	Open in IMG/M
3300020580\|Ga0210403_10162063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1831	Open in IMG/M
3300020580\|Ga0210403_10177698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300020580\|Ga0210403_10317419	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300020582\|Ga0210395_10212683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1451	Open in IMG/M
3300020582\|Ga0210395_10274788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1267	Open in IMG/M
3300020583\|Ga0210401_10018895	All Organisms → cellular organisms → Bacteria → Proteobacteria	6636	Open in IMG/M
3300021088\|Ga0210404_10495443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	690	Open in IMG/M
3300021168\|Ga0210406_10055176	All Organisms → cellular organisms → Bacteria → Proteobacteria	3462	Open in IMG/M
3300021168\|Ga0210406_10112245	All Organisms → cellular organisms → Bacteria → Proteobacteria	2309	Open in IMG/M
3300021168\|Ga0210406_10354854	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300021168\|Ga0210406_11214213	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300021170\|Ga0210400_10011130	All Organisms → cellular organisms → Bacteria → Proteobacteria	7236	Open in IMG/M
3300021170\|Ga0210400_10028292	All Organisms → cellular organisms → Bacteria → Proteobacteria	4351	Open in IMG/M
3300021180\|Ga0210396_10324259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1361	Open in IMG/M
3300021180\|Ga0210396_10613293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	945	Open in IMG/M
3300021181\|Ga0210388_10115877	All Organisms → cellular organisms → Bacteria → Proteobacteria	2305	Open in IMG/M
3300021181\|Ga0210388_10653094	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300021181\|Ga0210388_11608630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	540	Open in IMG/M
3300021402\|Ga0210385_10941842	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300021403\|Ga0210397_10034363	All Organisms → cellular organisms → Bacteria → Proteobacteria	3184	Open in IMG/M
3300021404\|Ga0210389_10000977	All Organisms → cellular organisms → Bacteria → Proteobacteria	24134	Open in IMG/M
3300021404\|Ga0210389_10103680	All Organisms → cellular organisms → Bacteria → Proteobacteria	2191	Open in IMG/M
3300021404\|Ga0210389_10987321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	653	Open in IMG/M
3300021405\|Ga0210387_10052086	All Organisms → cellular organisms → Bacteria → Proteobacteria	3299	Open in IMG/M
3300021405\|Ga0210387_10213928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1676	Open in IMG/M
3300021407\|Ga0210383_10196827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1723	Open in IMG/M
3300021407\|Ga0210383_10843676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783	Open in IMG/M
3300021420\|Ga0210394_11120736	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300021474\|Ga0210390_10508636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300021475\|Ga0210392_10007828	All Organisms → cellular organisms → Bacteria → Proteobacteria	5590	Open in IMG/M
3300021475\|Ga0210392_10025618	All Organisms → cellular organisms → Bacteria → Proteobacteria	3403	Open in IMG/M
3300021475\|Ga0210392_10074452	All Organisms → cellular organisms → Bacteria → Proteobacteria	2166	Open in IMG/M
3300021475\|Ga0210392_10323715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1110	Open in IMG/M
3300021475\|Ga0210392_10826316	Not Available	692	Open in IMG/M
3300021475\|Ga0210392_11219871	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300021477\|Ga0210398_10004086	All Organisms → cellular organisms → Bacteria → Proteobacteria	13804	Open in IMG/M
3300021477\|Ga0210398_11043491	Not Available	651	Open in IMG/M
3300021477\|Ga0210398_11265101	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300021479\|Ga0210410_10341647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1342	Open in IMG/M
3300021479\|Ga0210410_10984092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	732	Open in IMG/M
3300021479\|Ga0210410_11403452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	591	Open in IMG/M
3300021559\|Ga0210409_11049846	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300022506\|Ga0242648_1086709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300022509\|Ga0242649_1047434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	596	Open in IMG/M
3300022528\|Ga0242669_1031864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300022528\|Ga0242669_1037207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	787	Open in IMG/M
3300022530\|Ga0242658_1171432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	573	Open in IMG/M
3300022533\|Ga0242662_10283970	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300022714\|Ga0242671_1117030	Not Available	522	Open in IMG/M
3300022721\|Ga0242666_1180664	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300022722\|Ga0242657_1107802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	694	Open in IMG/M
3300023255\|Ga0224547_1000030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	36410	Open in IMG/M
3300023259\|Ga0224551_1051679	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300024271\|Ga0224564_1090590	Not Available	617	Open in IMG/M
3300025625\|Ga0208219_1101646	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300025627\|Ga0208220_1005061	All Organisms → cellular organisms → Bacteria → Proteobacteria	4873	Open in IMG/M
3300025633\|Ga0208480_1085398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	764	Open in IMG/M
3300025664\|Ga0208849_1177988	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300026291\|Ga0209890_10113504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	929	Open in IMG/M
3300026356\|Ga0257150_1071252	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300026490\|Ga0257153_1119836	Not Available	516	Open in IMG/M
3300027030\|Ga0208240_1026929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	634	Open in IMG/M
3300027117\|Ga0209732_1004748	All Organisms → cellular organisms → Bacteria → Proteobacteria	2246	Open in IMG/M
3300027117\|Ga0209732_1010918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300027496\|Ga0208987_1007757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300027567\|Ga0209115_1001590	All Organisms → cellular organisms → Bacteria → Proteobacteria	4065	Open in IMG/M
3300027574\|Ga0208982_1036867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	965	Open in IMG/M
3300027590\|Ga0209116_1054668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	864	Open in IMG/M
3300027855\|Ga0209693_10324438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300027895\|Ga0209624_10013960	All Organisms → cellular organisms → Bacteria → Proteobacteria	5135	Open in IMG/M
3300028016\|Ga0265354_1002186	All Organisms → cellular organisms → Bacteria → Proteobacteria	2503	Open in IMG/M
3300028021\|Ga0265352_1007073	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300028780\|Ga0302225_10426969	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300028906\|Ga0308309_10310403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1336	Open in IMG/M
3300029701\|Ga0222748_1040319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	768	Open in IMG/M
3300029882\|Ga0311368_10695599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	704	Open in IMG/M
3300029999\|Ga0311339_11584698	Not Available	579	Open in IMG/M
3300030545\|Ga0210271_10940590	Not Available	595	Open in IMG/M
3300030622\|Ga0265391_10316397	Not Available	524	Open in IMG/M
3300030631\|Ga0210279_10449004	Not Available	526	Open in IMG/M
3300030730\|Ga0307482_1044541	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300030740\|Ga0265460_10136745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1277	Open in IMG/M
3300030740\|Ga0265460_11942134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	610	Open in IMG/M
3300030740\|Ga0265460_12345065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	565	Open in IMG/M
3300030741\|Ga0265459_11897443	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300030741\|Ga0265459_13147148	Not Available	577	Open in IMG/M
3300030743\|Ga0265461_11798259	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300030743\|Ga0265461_12831387	Not Available	580	Open in IMG/M
3300030815\|Ga0265746_1017534	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300030852\|Ga0075389_11062421	Not Available	502	Open in IMG/M
3300030923\|Ga0138296_1389189	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300030937\|Ga0138302_1206436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1605	Open in IMG/M
3300030937\|Ga0138302_1479695	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300030937\|Ga0138302_1585657	Not Available	505	Open in IMG/M
3300031022\|Ga0138301_1165167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	882	Open in IMG/M
3300031022\|Ga0138301_1664585	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300031022\|Ga0138301_1686878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	756	Open in IMG/M
3300031022\|Ga0138301_1717661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300031057\|Ga0170834_101257973	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300031057\|Ga0170834_107797571	Not Available	502	Open in IMG/M
3300031128\|Ga0170823_10113658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	791	Open in IMG/M
3300031231\|Ga0170824_112160652	Not Available	512	Open in IMG/M
3300031231\|Ga0170824_115641476	Not Available	620	Open in IMG/M
3300031231\|Ga0170824_116184207	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300031708\|Ga0310686_100112544	Not Available	518	Open in IMG/M
3300031708\|Ga0310686_102820936	All Organisms → cellular organisms → Bacteria → Proteobacteria	17288	Open in IMG/M
3300031708\|Ga0310686_105056533	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300031708\|Ga0310686_108266226	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300031708\|Ga0310686_118928840	All Organisms → cellular organisms → Bacteria → Proteobacteria	5900	Open in IMG/M
3300031715\|Ga0307476_10012950	All Organisms → cellular organisms → Bacteria → Proteobacteria	5260	Open in IMG/M
3300031715\|Ga0307476_10108100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1969	Open in IMG/M
3300031715\|Ga0307476_10193823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300031715\|Ga0307476_10471401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	930	Open in IMG/M
3300031753\|Ga0307477_11038155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	537	Open in IMG/M
3300031754\|Ga0307475_10084235	All Organisms → cellular organisms → Bacteria → Proteobacteria	2457	Open in IMG/M
3300031823\|Ga0307478_10111521	All Organisms → cellular organisms → Bacteria → Proteobacteria	2132	Open in IMG/M
3300031823\|Ga0307478_10158729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1799	Open in IMG/M
3300032072\|Ga0326631_109807	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300032180\|Ga0307471_100532602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1327	Open in IMG/M
3300032515\|Ga0348332_11022179	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300032756\|Ga0315742_13231984	Not Available	526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.35%
Host-Associated	Host-Associated	0.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.73%
Aquatic	Environmental → Aquatic	2.61%
Plants	Host-Associated → Plants	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.81%
Peat	Environmental → Terrestrial → Peat	3.27%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.20%
Loam	Environmental → Terrestrial → Soil → Loam	16.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.58%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.31%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.65%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.65%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028021	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE5	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030622	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030631	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO141-VCO086SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030852	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10105342	3300001166	Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHV
JGI12659J15293_100503371	3300001546	Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGQGR*
JGI12635J15846_100155886	3300001593	Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAVNSLRSGTQLFSDGLAQVHAFVRTLHVAGQGR*
JGI12635J15846_103833072	3300001593	Forest Soil	MLVTQTSAVEEENDFNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRVAQYR*
JGI12053J15887_104104371	3300001661	Forest Soil	MRVNQTSAVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV*
JGIcombinedJ26739_1002364082	3300002245	Forest Soil	MLVTRTSAEKENAINVVRLGLDLPAAAASAFEDIKQXFTNXKQKFTNQRQWREFVSAVQCSVNYPSAINSLRSGTKWFSDGLAEASSCLARTLRVAQYR*
JGIcombinedJ26739_1015529592	3300002245	Forest Soil	MIVSQTSAVEKENDVVRPGMDLPAAAASAFEDIKQKFSNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQYR*
Ga0062385_111469011	3300004080	Bog Forest Soil	MLVSPASAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTSQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLA
Ga0062389_1018173332	3300004092	Bog Forest Soil	MLVSPASAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQA
Ga0058903_14124741	3300004103	Forest Soil	MHTIQSSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSD
Ga0058891_15874322	3300004104	Forest Soil	MLMTDTSVEQESDLNVARLRLDLPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAVNTLRSGTKWFSDGLAQASSCLARTLDAALDTARRR*
Ga0062388_1020241801	3300004635	Bog Forest Soil	MLVSPASAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHTRCR*
Ga0070761_102318422	3300005591	Soil	MLVSQISAVEEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR*
Ga0070762_100020556	3300005602	Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR*
Ga0070762_100097232	3300005602	Soil	MLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR*
Ga0070766_103285341	3300005921	Soil	MLVSQISAVEEDNDINVVRLGLDLPAAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSD
Ga0080026_100907202	3300005952	Permafrost Soil	MLVTESSAIELENDIDVVRLGRALPAAAASALEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGGKWFSDGLAQASSCLKRTLHVAQFR*
Ga0066789_100803782	3300005994	Soil	MIVTQSSAVEPENDINVRLGLNLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINAVRHHTKWFSDGLAQASSCLAQTLRGR*
Ga0070765_1004183251	3300006176	Soil	MLVTQISAVEEENNINVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR*
Ga0070765_1010798302	3300006176	Soil	MHTIQSSVEQEDDLNVARLGLDLPAAAASAFEDMRRKFANKFTNQRQWRDFVSAAQCSVNYPAAINTLRDGTKWFSDGLAQASSCLARTLLHAARRR*
Ga0075522_101219422	3300006638	Arctic Peat Soil	MLVSKTAGLDEENDINVVRLGLDLPAAAASAFEDIKRKFTNQRQWREFASAVQSSVAQCSVNYPAAINSLRSGTQWFSDGLAQASSCLARTLHIARYR*
Ga0116129_10230252	3300009633	Peatland	MLVTQASAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAVNSLRSGTQLFSDGLAQVHAFVRTLHVAGQGG*
Ga0134126_116839731	3300010396	Terrestrial Soil	MLVSQTSAVQPENDISLRLRIDLPAAAASALEDIRQKFTNQRQWREFVSAVQVSVNYPAAISALRHHTKWFSDG
Ga0126357_12379122	3300010864	Boreal Forest Soil	MLVKQTSAVEEENDVNVVRLGLDLPAAAVSAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRVAQYR*
Ga0150983_110044352	3300011120	Forest Soil	MFSRKFAMLMTDTSVEQESDLNVARLRLDLPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAVNTLRSGTKWFSDGLAQASSCLARTLDAALDTARRR*
Ga0137398_108920761	3300012683	Vadose Zone Soil	ETSLEQESDLNVARLRLDLPAAAASAFEDIKRRFTNQRQWREFASAIQCTVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAALDSARRR*
Ga0182024_111039362	3300014501	Permafrost	FAAYRRIISHTRRMFQRCFAMLVTQINAVEEENNINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRTSTKWFSDGLAQASTCLKRTLHAARNR*
Ga0167644_10843041	3300015206	Glacier Forefield Soil	MRVNQTSTVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAR*
Ga0193726_1000005481	3300020021	Soil	MRVNQTSAVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0193726_11512302	3300020021	Soil	MVNQTSAVEEENDVKVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRVAQYR
Ga0193753_103698091	3300020034	Soil	MLVKQTSAVEEENDVNIVRLGLDLPAAAVSAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRGQGV
Ga0210403_101620632	3300020580	Soil	MLMTDTSVEQESDLNVARLRLDLPAAAANAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAALDTARRR
Ga0210403_101776982	3300020580	Soil	MHTIQSSVEQEDDLNVARLGLDLPAAAASAFEDMRRKFANKFTNQRQWRDFVSAAQCSVNYPAAINTLRDGTKWFSDGLAQASSCLARTLLHAARRR
Ga0210403_103174193	3300020580	Soil	MLITETSLEQESDLNVARLRLDLPAAAASAFEGIKRRFTNQRQWREFAAAIQCSVNYPAAINTLRSGTKWFSDGL
Ga0210395_102126831	3300020582	Soil	MHTIQGSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0210395_102747881	3300020582	Soil	MLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR
Ga0210401_100188953	3300020583	Soil	MHTIQGSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAIGTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0210404_104954432	3300021088	Soil	NDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR
Ga0210406_100551762	3300021168	Soil	MHTIQSGVEQEDDLNVARLGLDLPAAAASAFEDIRRKFANKFANQRQWREFLSAAQCSVNYPAAINTLRDGTRWFSDGLAQASSCLARTLLHAARRR
Ga0210406_101122451	3300021168	Soil	MHTIQSSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0210406_103548542	3300021168	Soil	MSMSPSSVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRYGTKWFNDGLAQASSCLARTLHAAQFCRALNSDT
Ga0210406_112142132	3300021168	Soil	MRVNQTSAVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQSSS
Ga0210400_100111305	3300021170	Soil	MLITETSLEQESDLNVARLRLDLPAAAASAFEDIKRRFTNQRQWREFAAAIQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAALDSARRR
Ga0210400_100282922	3300021170	Soil	MSMSPSRVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRYGTKWFNDGLAQASSCLARTLHAAQFCRALNSDT
Ga0210396_103242592	3300021180	Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0210396_106132932	3300021180	Soil	TAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR
Ga0210388_101158774	3300021181	Soil	MLATQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0210388_106530941	3300021181	Soil	MLTSETGSLDEESDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0210388_116086301	3300021181	Soil	LVPQTSALEEENGINVVRLGLDLPAAAANAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASSCLARTWRVGKV
Ga0210385_109418421	3300021402	Soil	MLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQ
Ga0210397_100343633	3300021403	Soil	MLMTDTSVEQESDLNVARLRLDLPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAVNTLRSGTKWFSDGLAQASSCLARTLDAALDTARRR
Ga0210389_1000097718	3300021404	Soil	PFREFAMSMSPSSVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRYGTKWFNDGLAQASSCLARTLHAAQFCRALNSDT
Ga0210389_101036802	3300021404	Soil	MRVNQTSAVEEGNEVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0210389_109873212	3300021404	Soil	MLVPQTSALEEENGINVVRLGLDLPAAAANAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASSCLARTWRVGKV
Ga0210387_100520862	3300021405	Soil	MRINQASAVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASSCLARTLRVAQYR
Ga0210387_102139282	3300021405	Soil	IEEEIDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0210383_101968271	3300021407	Soil	HTIQISVEQEDDLNVARLGLDLPAAAASAFEDMRRKFANKFTNQRQWRDFVSAAQCSVNYPAAINTLRDGTKWFSDGLAQASSCLARTLLHAARRR
Ga0210383_108436762	3300021407	Soil	MLISDTNGVNAENDNVVRLGLDLPAAAASAFQDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLKRTLHVAQFR
Ga0210394_111207362	3300021420	Soil	MHTIQSSVEQENDIDVVRLGLDLPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAISTLYPAAINTLRSGTKWFGDGLAQVPALARTLLHAARRR
Ga0210390_105086361	3300021474	Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVR
Ga0210392_100078283	3300021475	Soil	MLIKSGAIEPSSELDVVRLGLDLPAAAANAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRTGTKWFSGGLAQASSCLARTLRVAQYR
Ga0210392_100256181	3300021475	Soil	MSMSPSSVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRSGTKWFSDGLAQASSCLARTLHAAQFCRALNSDT
Ga0210392_100744522	3300021475	Soil	MILSKLTVREFAMHTIQSSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0210392_103237151	3300021475	Soil	MLTSETGRLDEENDINIVRLGLDLPAAAASAFEDIKQKLTNQKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0210392_108263161	3300021475	Soil	RKISMRINQASAVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAR
Ga0210392_112198712	3300021475	Soil	MLVSRVNAEQEDDLNVIRLGVDLPAVAASAFEDIKRKFANQRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLA
Ga0210398_100040867	3300021477	Soil	MEPIGGECSEGKFAMLISETSGLDAENEINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCTVNYPAAINSVRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0210398_110434911	3300021477	Soil	MLTSETGSLDEECDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0210398_112651011	3300021477	Soil	MLISQTGGLDEEDDSNVVRLGLDLPAAAASAFEDIRRKFTNQRQWREFVSAIQCSVNYPAAINSVRTGTKWFSDGLAQASSCLKRNLLVARDR
Ga0210410_103416472	3300021479	Soil	MIQSKLTVREFAMHTIQSSVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0210410_109840922	3300021479	Soil	MHTIQSGVEQEDDLNVARLGLDLPAAAASAFEDMRRKFANKFTNQRQWRDFVSAAQCSVNYPAAINTLRDGTKWFSDGLAQASSCLARTLLHAARRR
Ga0210410_114034522	3300021479	Soil	MMEPIGGECSEGKFAMLISETSGLDAENEINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCTVNYPAAINSVRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0210409_110498462	3300021559	Soil	MHTIQSSVEQENDIDVVRLGLDLPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAISTLYPAAINTLRS
Ga0242648_10867091	3300022506	Soil	LLKEMSMLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAALDTARRR
Ga0242649_10474341	3300022509	Soil	SLRKFSMLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0242669_10318641	3300022528	Soil	LRKFSMLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0242669_10372071	3300022528	Soil	LLKEMSMLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR
Ga0242658_11714321	3300022530	Soil	AIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0242662_102839701	3300022533	Soil	MLMTDTSVEQESDLNVARLRLDLPAAAANAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAA
Ga0242671_11170301	3300022714	Soil	LSEEFSMLTSETGSLDEESDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0242666_11806641	3300022721	Soil	MLATQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHA
Ga0242657_11078022	3300022722	Soil	EMSMLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLDAALDTARRR
Ga0224547_100003029	3300023255	Soil	MIVNQTSAVDEENDVNVVRLGMDLPAAATSAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFNDGLAQASSCLARTLRVAQYR
Ga0224551_10516791	3300023259	Soil	MLVSQTSALEEESDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAISSLRSGTKWFSDGLAQASSCLARTLHVAQFR
Ga0224564_10905902	3300024271	Soil	MLVSPATAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTSQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHTRCR
Ga0208219_11016461	3300025625	Arctic Peat Soil	MLVSQTSAVEAESDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAISSLRSGTKWFNDGLAQASSCLARTLHVAQFR
Ga0208220_10050613	3300025627	Arctic Peat Soil	MLVSKTAGLDEENDINVVRLGLDLPAAAASAFEDIKRKFTNQRQWREFASAVQSSVAQCSVNYPAAINSLRSGTQWFSDGLAQASSCLARTLHIARYR
Ga0208480_10853981	3300025633	Arctic Peat Soil	MLETARVDEENDINVVRLGLELPAAAASAAASALEDIKRKFTNQRQWREFISAVQCSVNYPAAINSLRSGTKWFSDGLVQASTCLKRNLLIARNR
Ga0208849_11779881	3300025664	Arctic Peat Soil	MLVSKTAGLDEENDINVVRLGLDLPAAAASAFEDIKRKFTNQRQWREFVSAVQCSVNYPAAISSLRSGTKWFNDGLAQASS
Ga0209890_101135042	3300026291	Soil	MIVTQSSAVEPENDINVRLGLNLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINAVRHHTKWFSDGLAQASSCLAQTLRGR
Ga0257150_10712522	3300026356	Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKLFSDGLAQVH
Ga0257153_11198362	3300026490	Soil	MLITETSLEQESDLNVARLRLDLPAAAASAFQDIKRRFTNQRQWREFASAIQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLDAALDSARRR
Ga0208240_10269291	3300027030	Forest Soil	DVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAISTLYPAAINTLRSGTKWFSDGLAQVHAFARTLHNRCR
Ga0209732_10047482	3300027117	Forest Soil	MLVTRTSAEKENAINVVRLGLDLPAAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPSAINSLRSGTKWFSDGLAEASSCLARTLRVAQYR
Ga0209732_10109182	3300027117	Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAVNSLRSGTQLFSDGLAQVHAFVRTLHVAGQGR
Ga0208987_10077571	3300027496	Forest Soil	MLISQTHGHEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRGQGV
Ga0209115_10015905	3300027567	Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGQGR
Ga0208982_10368672	3300027574	Forest Soil	MPRSPKKLALAAAIVCVVLGAAAAAANALEDIKQKFTNQRQWREFVSAVQCSVNYPAAVNSLRSGTKWFSDGLAQAASSLAPTLRAAQVR
Ga0209116_10546682	3300027590	Forest Soil	MLVSQISAVEEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAISSLRSGTKWFSDGLAQASSCLARTLHVAQYR
Ga0209693_103244382	3300027855	Soil	MLVSQISAVEEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSVFTD
Ga0209624_100139604	3300027895	Forest Soil	MIVSQTSAVEKENDVVRPGMDLPAAAASAFEDIKQKFSNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQYR
Ga0265354_10021862	3300028016	Rhizosphere	MLVSPASAVEEENDINIVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHTRCR
Ga0265352_10070732	3300028021	Soil	MLISETNGLDAENEINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0302225_104269691	3300028780	Palsa	MLVSQISAVEEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR
Ga0308309_103104032	3300028906	Soil	MLVSQISAVEEDNDINVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR
Ga0222748_10403191	3300029701	Soil	LKEMSMLASQTTAETENDINLVRLGLELPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLHVAQIR
Ga0311368_106955991	3300029882	Palsa	EEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR
Ga0311339_115846982	3300029999	Palsa	MLVSQIGAVEEDNDMNVVRLGLDLPAAAASAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQVHAFARTLHARCR
Ga0210271_109405902	3300030545	Soil	MLVSQTNAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHSRYR
Ga0265391_103163971	3300030622	Soil	MLISETSGLDAENEINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSVRSGTKWFSDGLAQASSCLARTLRLAQFR
Ga0210279_104490041	3300030631	Soil	MIVSQIGAVEQQDDMNLRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCVARTLRVTRNR
Ga0307482_10445412	3300030730	Hardwood Forest Soil	MRINQASAVEEEKDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAR
Ga0265460_101367452	3300030740	Soil	MLVSQTSAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHTRCR
Ga0265460_119421342	3300030740	Soil	LVSQTSAVEEENDINVVRLGLDLPAAAVSAFEDIKQKFANQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASTCLARTLRVAGHR
Ga0265460_123450651	3300030740	Soil	MLISETSGLDAENEINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSVRSGTKWFSDGLAQASSCLARTLRVAPYR
Ga0265459_118974431	3300030741	Soil	MLVSQISAVEEDNDINVVRLGLDLPAAAVSAFEDIKQKFTNQFTNQRQWREFVSAVQCSVNYPAAISSLRSGTKWFSDGVAQVHAFARTLHARCR
Ga0265459_131471482	3300030741	Soil	MLISRTSGLDEENDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGQGR
Ga0265461_117982592	3300030743	Soil	MLISETSGLDAENKINVVRLGLDLPAAAAGAFEYIKQTFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAPYR
Ga0265461_128313872	3300030743	Soil	MLVTQISAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPSAINSLRSSTKWFSDGLAQASTCLKRTLLVARNR
Ga0265746_10175342	3300030815	Soil	MLVTQTSAIEVENDVNVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKLFSDGLAQVHAFVRTLHVAGQGR
Ga0075389_110624211	3300030852	Soil	MLMTETSVEQESDLNVARLRLDLPAAAASAFEGIKRQFTNKRQWREFASAVQCSVNVQCSVNYPAAINALRSGTKWFSDGLAQASSCLARTLDAASRSIQSAARFR
Ga0138296_13891891	3300030923	Soil	MRINQASAVEEENVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASS
Ga0138302_12064361	3300030937	Soil	MLMNQASAAEENDINVVRLGLDLPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPSAINSLRSGTKWFSDGWAQASSCLARTLHVAQFR
Ga0138302_14796952	3300030937	Soil	MRINQASAVEEENVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAVNSLRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0138302_15856571	3300030937	Soil	MLMTETSVEQESDLNVARLRLDLPAAAASAFEGIKRQFTNKRQWREFASAVQSSVNVQCSVNYPAAINALRSGTKWFSDGLAQAS
Ga0138298_15744972	3300031015	Soil	MRINQTSTVEEENDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSD
Ga0138301_11651672	3300031022	Soil	MRINQASAVEEENVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0138301_16645851	3300031022	Soil	MLISQTHSLEEENDIDVVRLGLDLPAAAANAFKDIKQRFSNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASSCLARAAGSVAKNKKRPTKIEKEIKLENQNTSTMI
Ga0138301_16868781	3300031022	Soil	MLMNQASAAEENDINVVRLGLDLPAVAASAAASAFEDIKQKFTNHKQKFTNQRQWREFVSAVQCSVNYPSAINSLRSGTKWFSDGLAQASSCLARTLHVAQFR
Ga0138301_17176611	3300031022	Soil	ESEMLVSQVNAEQEDDLNVIGLGVDLPAAAASAFEDIKRKFANQRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLAQASSCLARTLHSAARSR
Ga0170834_1012579731	3300031057	Forest Soil	MLISQTHSLEEENDIDVVRLGLDLPAAAANAFKDIKQRFSNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGVAQASSCLARAAGSVEKTRYLRKKKVRKN
Ga0170834_1077975711	3300031057	Forest Soil	LKEVAMMMTQTSIEQENDINVVRLGLDFPAAAASAFEGIKRKFTNQRQWREFASAIQCSVNYPAAINTLRSSTKWFSDGLVQASSCLARTLDAALDAARRR
Ga0170823_101136582	3300031128	Forest Soil	LMTETSVEQESDLNVARLRLDLPAAAASAFEGIKRQFTNKRQWREFASAVQSSVNVQCSVNYPAAINALRSGTKWFSDGLAQASSCLARTLDAALDAARRR
Ga0170824_1121606522	3300031231	Forest Soil	MLMTETSVEQESDLNVARLRLDLPAAAASAFEGIKRQFTNKRQWREFASAVQCSVNVQCSVNYPAAINALRSGTKWFSDGLAQASSCLARTLDAALDSARRR
Ga0170824_1156414762	3300031231	Forest Soil	MLMTETSVEQESDLNVARLRLDLPAAAASAFEGIKRQFTNKRQWREFASAVQSSVNVQCSVNYPAAINALRSGTKWFSDGLAQASSCLARTLDAASRSIQSAARFR
Ga0170824_1161842072	3300031231	Forest Soil	MLIVQNGAVEQSSELDVVRLGMDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAALRSGTKWFSDGLA
Ga0310686_1001125441	3300031708	Soil	MLISQPSTVEGESDINVRLALDLPAAAASAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHARCR
Ga0310686_10282093610	3300031708	Soil	MLISETSGLDAENEINVVRLGLDLPAAAASAFEDIKQKFSNQRQWREFVSAVQCSVNYPAAINSVRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0310686_1050565332	3300031708	Soil	MLVSQTSAVEEENDMNVVRLGLDLPAAAVSAFEDIKQKFANQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASTCLARTLRVAGHR
Ga0310686_1082662262	3300031708	Soil	MLVAQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGGTKLFSDGLAQVHAFVRTL
Ga0310686_1189288402	3300031708	Soil	MLVTKTSGIEEENDINVVRLGLDLPAAAASAFEDIKQKFTDQKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAEASSCLAQALHVAQFR
Ga0307476_100129504	3300031715	Hardwood Forest Soil	MLVNQTSAIEEGNDVNVVRLGLDLPAAAASAFEDIKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQASSCLARTLRVAQYR
Ga0307476_101081003	3300031715	Hardwood Forest Soil	MLASPATAVEEESDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHNRCR
Ga0307476_101938232	3300031715	Hardwood Forest Soil	MSMSPSSVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRSGTKWFNDGLAQASSCLARTLHAAQFCRALNSDT
Ga0307476_104714012	3300031715	Hardwood Forest Soil	MLVTQTSAIEEENDISVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0307477_110381551	3300031753	Hardwood Forest Soil	MSMSPSSVEQENDLNVARLALDLPAAAASAFEGIRRKFTNQREWRAFVSAVECRVNYPAAINTLRYGTKWFSDGLAQASSCLARTLHAAQFRRALNSDT
Ga0307475_100842352	3300031754	Hardwood Forest Soil	MHTIQGRVEQENDIDVVRLGLDLPAAAVSAFEDIKRKFTNKRQWREFVSAVQSSVNYPAAIGTLYPAAINTLRSGTKWFSDGLAQASSCLVRTLEAARRR
Ga0307478_101115212	3300031823	Hardwood Forest Soil	MLVSPATAVEEESDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFARTLHNRCR
Ga0307478_101587292	3300031823	Hardwood Forest Soil	MLVTQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKYTNQRQWREFVSAVQCSVNYPAAINSLRSGTQLFSDGLAQVHAFVRTLHVAGYR
Ga0326631_1098071	3300032072	Soil	MLVSPATAVEEENDINVVRLGLDLPAAAASAFEDIKQKFTNQFANQRQWREFVSAVQCSVNYPAAINSLRSGTKWFSDGLAQVHAFA
Ga0307471_1005326022	3300032180	Hardwood Forest Soil	MLMTETSVEQGNDIHVVRLGLDFPAAAASAFEDIKRKFTNKRQWREFVSAVQCSVNYPAAINTLRSSTKWFSDGLAQASSCLARTLDTALDAARRR
Ga0348332_110221791	3300032515	Plant Litter	MLVAQTSAIEEENDINVVRRGLDLPAAAASAFEDIKQKLTNHKQKFTNQRQWREFVSAVQCSVNYPAAINSLRSG
Ga0315742_132319841	3300032756	Forest Soil	MLMTETSVEQESDLNVARLRLELPAAAASAFEDIKRQFTNKRQWREFVSAVQCSVNYPAAINTLRSGTKWFSDGLGKLLRVLRERSTPLSIPLDAASG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences