Metagenome / Metatranscriptome Family F045252

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045252
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	69 residues
Representative Sequence	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Number of Associated Samples	109
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.11 %
% of genes near scaffold ends (potentially truncated)	30.72 %
% of genes from short scaffolds (< 2000 bps)	83.66 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.353 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (28.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.895 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.65% β-sheet: 0.00% Coil/Unstructured: 48.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF13561	adh_short_C2	52.94
PF03976	PPK2	10.46
PF01329	Pterin_4a	7.19
PF14023	DUF4239	3.27
PF01979	Amidohydro_1	1.31
PF00106	adh_short	0.65
PF00689	Cation_ATPase_C	0.65
PF13246	Cation_ATPase	0.65
PF01425	Amidase	0.65
PF01710	HTH_Tnp_IS630	0.65
PF00459	Inositol_P	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	10.46
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	7.19
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.65
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.65
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.35 %
Unclassified	root	N/A	17.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.97 %
Unclassified	root	N/A	17.65 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.09 %
Unclassified	root	N/A	17.65 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	2.61 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	59.48 %
Unclassified	root	N/A	17.65 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	3.27 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	3.27 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.65 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3.27 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG01AP5FM	Not Available	538	Open in IMG/M
3300001471\|JGI12712J15308_10008556	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300001471\|JGI12712J15308_10103582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300001546\|JGI12659J15293_10002296	All Organisms → cellular organisms → Bacteria → Proteobacteria	5919	Open in IMG/M
3300001546\|JGI12659J15293_10002571	All Organisms → cellular organisms → Bacteria	5566	Open in IMG/M
3300001546\|JGI12659J15293_10130433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	548	Open in IMG/M
3300002245\|JGIcombinedJ26739_100028205	All Organisms → cellular organisms → Bacteria	4936	Open in IMG/M
3300002245\|JGIcombinedJ26739_100178703	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300002245\|JGIcombinedJ26739_100217767	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1802	Open in IMG/M
3300002245\|JGIcombinedJ26739_101399097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300003505\|JGIcombinedJ51221_10223356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	764	Open in IMG/M
3300004082\|Ga0062384_100514361	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300004092\|Ga0062389_102862193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300004092\|Ga0062389_104226224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300004635\|Ga0062388_101568457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	668	Open in IMG/M
3300005435\|Ga0070714_102014399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300005436\|Ga0070713_100756540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300005534\|Ga0070735_10345296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	893	Open in IMG/M
3300005534\|Ga0070735_10477988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	743	Open in IMG/M
3300005541\|Ga0070733_10023584	All Organisms → cellular organisms → Bacteria	3836	Open in IMG/M
3300005542\|Ga0070732_10280819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	999	Open in IMG/M
3300005564\|Ga0070664_101462935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	646	Open in IMG/M
3300005610\|Ga0070763_10056279	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300005921\|Ga0070766_10108803	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300005921\|Ga0070766_10123920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1556	Open in IMG/M
3300005944\|Ga0066788_10136779	Not Available	619	Open in IMG/M
3300006175\|Ga0070712_100783339	Not Available	817	Open in IMG/M
3300006806\|Ga0079220_10921857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	681	Open in IMG/M
3300009093\|Ga0105240_10723721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1084	Open in IMG/M
3300009520\|Ga0116214_1400256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300009521\|Ga0116222_1087334	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300009545\|Ga0105237_10452441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1290	Open in IMG/M
3300009633\|Ga0116129_1016895	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300010154\|Ga0127503_10291039	Not Available	528	Open in IMG/M
3300010154\|Ga0127503_10605662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300010373\|Ga0134128_10694274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1130	Open in IMG/M
3300010375\|Ga0105239_13284009	Not Available	526	Open in IMG/M
3300010376\|Ga0126381_100775198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300010864\|Ga0126357_1218473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300010865\|Ga0126346_1271340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300010877\|Ga0126356_10600924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	696	Open in IMG/M
3300010880\|Ga0126350_12141183	Not Available	763	Open in IMG/M
3300011120\|Ga0150983_13036696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300011120\|Ga0150983_14807609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	578	Open in IMG/M
3300011120\|Ga0150983_15630738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300011404\|Ga0153951_1015899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1289	Open in IMG/M
3300011418\|Ga0153954_1009045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3042	Open in IMG/M
3300012212\|Ga0150985_116692160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300013105\|Ga0157369_12184151	Not Available	561	Open in IMG/M
3300014501\|Ga0182024_10663067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1294	Open in IMG/M
3300015206\|Ga0167644_1005081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7386	Open in IMG/M
3300015206\|Ga0167644_1013654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3868	Open in IMG/M
3300016270\|Ga0182036_10352779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1134	Open in IMG/M
3300017924\|Ga0187820_1094019	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300017970\|Ga0187783_10851299	Not Available	657	Open in IMG/M
3300020579\|Ga0210407_10047635	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300020579\|Ga0210407_10882094	Not Available	687	Open in IMG/M
3300020580\|Ga0210403_11120081	Not Available	610	Open in IMG/M
3300020580\|Ga0210403_11310817	Not Available	553	Open in IMG/M
3300020582\|Ga0210395_10474286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	942	Open in IMG/M
3300020582\|Ga0210395_10579843	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300021170\|Ga0210400_10761085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300021170\|Ga0210400_11494880	Not Available	536	Open in IMG/M
3300021171\|Ga0210405_10275209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1331	Open in IMG/M
3300021178\|Ga0210408_10018878	All Organisms → cellular organisms → Bacteria → Proteobacteria	5529	Open in IMG/M
3300021180\|Ga0210396_10179509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1896	Open in IMG/M
3300021401\|Ga0210393_10307649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300021403\|Ga0210397_10842128	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300021404\|Ga0210389_10165844	Not Available	1717	Open in IMG/M
3300021406\|Ga0210386_10508386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1041	Open in IMG/M
3300021406\|Ga0210386_10775786	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	824	Open in IMG/M
3300021407\|Ga0210383_11745105	Not Available	509	Open in IMG/M
3300021433\|Ga0210391_11521179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300021474\|Ga0210390_10181765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1777	Open in IMG/M
3300021474\|Ga0210390_11096267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	647	Open in IMG/M
3300021474\|Ga0210390_11159479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300021474\|Ga0210390_11505705	Not Available	532	Open in IMG/M
3300021475\|Ga0210392_10651646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300021475\|Ga0210392_10789870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	709	Open in IMG/M
3300021479\|Ga0210410_10417133	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300021559\|Ga0210409_10157708	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2078	Open in IMG/M
3300021860\|Ga0213851_1768084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	594	Open in IMG/M
3300022522\|Ga0242659_1139378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300022523\|Ga0242663_1106931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	564	Open in IMG/M
3300022530\|Ga0242658_1172415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300022532\|Ga0242655_10273064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300022724\|Ga0242665_10191783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300022726\|Ga0242654_10279120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	608	Open in IMG/M
3300025588\|Ga0208586_1022909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1502	Open in IMG/M
3300025633\|Ga0208480_1002347	All Organisms → cellular organisms → Bacteria → Proteobacteria	6667	Open in IMG/M
3300025634\|Ga0208589_1149680	Not Available	531	Open in IMG/M
3300025913\|Ga0207695_10540384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1047	Open in IMG/M
3300027432\|Ga0209421_1116077	Not Available	550	Open in IMG/M
3300027505\|Ga0209218_1120329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	552	Open in IMG/M
3300027567\|Ga0209115_1006130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2462	Open in IMG/M
3300027568\|Ga0208042_1047425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1100	Open in IMG/M
3300027575\|Ga0209525_1082815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300027609\|Ga0209221_1036878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1304	Open in IMG/M
3300027609\|Ga0209221_1098199	Not Available	755	Open in IMG/M
3300027619\|Ga0209330_1008335	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300027662\|Ga0208565_1091169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300027855\|Ga0209693_10024668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2912	Open in IMG/M
3300027855\|Ga0209693_10192092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300027867\|Ga0209167_10027648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2716	Open in IMG/M
3300027879\|Ga0209169_10216537	Not Available	1002	Open in IMG/M
3300027884\|Ga0209275_10042656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2146	Open in IMG/M
3300027895\|Ga0209624_10000912	All Organisms → cellular organisms → Bacteria → Proteobacteria	24874	Open in IMG/M
3300027895\|Ga0209624_10418444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	893	Open in IMG/M
3300027908\|Ga0209006_10145550	All Organisms → cellular organisms → Bacteria → Proteobacteria	2081	Open in IMG/M
3300027908\|Ga0209006_10223915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1626	Open in IMG/M
3300027908\|Ga0209006_11173184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300027908\|Ga0209006_11284087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300029701\|Ga0222748_1111282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300030007\|Ga0311338_11620014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300030707\|Ga0310038_10075866	All Organisms → cellular organisms → Bacteria → Proteobacteria	1815	Open in IMG/M
3300030730\|Ga0307482_1133778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	710	Open in IMG/M
3300030741\|Ga0265459_14102965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300030760\|Ga0265762_1127226	Not Available	588	Open in IMG/M
3300031029\|Ga0074012_10067549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	951	Open in IMG/M
3300031231\|Ga0170824_106197991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1048	Open in IMG/M
3300031446\|Ga0170820_10550256	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031474\|Ga0170818_100931822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300031708\|Ga0310686_103931987	Not Available	978	Open in IMG/M
3300031708\|Ga0310686_110224103	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300031708\|Ga0310686_115635234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1119	Open in IMG/M
3300031708\|Ga0310686_119881883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1552	Open in IMG/M
3300031718\|Ga0307474_10723878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300031719\|Ga0306917_10841314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	719	Open in IMG/M
3300031795\|Ga0318557_10541721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300031890\|Ga0306925_11545893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	648	Open in IMG/M
3300031890\|Ga0306925_11721851	Not Available	604	Open in IMG/M
3300031912\|Ga0306921_12089117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	601	Open in IMG/M
3300031938\|Ga0308175_100057229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3405	Open in IMG/M
3300032261\|Ga0306920_101524185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	954	Open in IMG/M
3300032515\|Ga0348332_11199749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300032515\|Ga0348332_13002621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300032515\|Ga0348332_13060162	Not Available	810	Open in IMG/M
3300032515\|Ga0348332_13371073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	520	Open in IMG/M
3300032756\|Ga0315742_12954186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	548	Open in IMG/M
3300032756\|Ga0315742_13162146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300032805\|Ga0335078_10921168	Not Available	1047	Open in IMG/M
3300032895\|Ga0335074_10189569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2528	Open in IMG/M
3300032895\|Ga0335074_10586951	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300032895\|Ga0335074_11168110	Not Available	653	Open in IMG/M
3300032896\|Ga0335075_10092279	All Organisms → cellular organisms → Bacteria	4004	Open in IMG/M
3300032896\|Ga0335075_10734723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	941	Open in IMG/M
3300032898\|Ga0335072_10760747	Not Available	935	Open in IMG/M
3300032898\|Ga0335072_10819103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	887	Open in IMG/M
3300032898\|Ga0335072_11746013	Not Available	516	Open in IMG/M
3300033134\|Ga0335073_10045655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	5890	Open in IMG/M
3300033134\|Ga0335073_10498153	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1392	Open in IMG/M
3300033134\|Ga0335073_11024710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300033134\|Ga0335073_11220894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Aquatic	Environmental → Aquatic	5.88%
Plants	Host-Associated → Plants	4.58%
Fungi	Host-Associated → Fungi	1.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.97%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.61%
Mycelium	Host-Associated → Fungi → Mycelium	1.31%
Peat	Environmental → Terrestrial → Peat	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.98%
Loam	Environmental → Terrestrial → Soil → Loam	23.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.27%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.31%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.31%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.31%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.31%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031029	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_06894680	2170459009	Grass Soil	MSPILPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCALEAWSCQETPVRSDDER
JGI12712J15308_100085564	3300001471	Forest Soil	MSPILPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCEEAPAKREDEHGHH*
JGI12712J15308_101035822	3300001471	Forest Soil	MSPILPISFVATLLCVLVAIDWAIYQQILFVGAALSATVWVCSLEAWSCQEAPVRSEDDRGHS*
JGI12659J15293_100022967	3300001546	Forest Soil	MGHVMSPILPISFLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVTSEDERSHPHPADE*
JGI12659J15293_100025713	3300001546	Forest Soil	MSPILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQEAPAKSEDEGGHS*
JGI12659J15293_101304332	3300001546	Forest Soil	APVLPSMGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
JGIcombinedJ26739_1000282054	3300002245	Forest Soil	MGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
JGIcombinedJ26739_1001787034	3300002245	Forest Soil	MSPILPISFVATLLCVLVAIDWAIYQQILFVGAALSATVWVCSLEAWSCQEAPVRSEDDRGRY*
JGIcombinedJ26739_1002177673	3300002245	Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEHGHGHY*
JGIcombinedJ26739_1013990972	3300002245	Forest Soil	MSPILPISFLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVRSEDERSHPYLADE*
JGIcombinedJ51221_102233562	3300003505	Forest Soil	MSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY*
Ga0062384_1005143612	3300004082	Bog Forest Soil	VAGVSQMWRIAPVLPSMGPDMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGEHYPADE*
Ga0062389_1028621932	3300004092	Bog Forest Soil	PFLPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKNEDERGQY*
Ga0062389_1042262242	3300004092	Bog Forest Soil	MSAIVPISFVLTLGCVLVAIDWALYQQLLFVGAAVSATVWACSLEAWSCQPAPARSDGERSLANPADD*
Ga0062388_1015684571	3300004635	Bog Forest Soil	MGPDMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
Ga0070714_1020143992	3300005435	Agricultural Soil	IMSLILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSSQEAPGRREEERRSLSAGE*
Ga0070713_1007565402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGHIMSLILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPGRREEERRSLSAGE*
Ga0070735_103452962	3300005534	Surface Soil	MSIILPISFVATLLCVLVAIDWPLYQQILFLGAALSATVCACSLEAWGCQEAPARREEERSPHE*
Ga0070735_104779881	3300005534	Surface Soil	MAGVSEPGAGKRLSRVTWVPKMSAILPISFVVTLLCVLLAIDWPLYQQILFLGAALSATVWACSLEAWSAGGAPEDERGRPYPADE*
Ga0070733_100235843	3300005541	Surface Soil	MSIILPISFVATLLCVLVAIDWPLYQQILFLGAALSATVCACSLEAWGCQEAPARREEERSSHE*
Ga0070732_102808192	3300005542	Surface Soil	MSIILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVCACSLEAWGCQEAPARREEERSPHQ*
Ga0070664_1014629351	3300005564	Corn Rhizosphere	LILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPGRREEERRSLSAGE*
Ga0070763_100562792	3300005610	Soil	MWPAFGKCGEWRQSCRQLGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
Ga0070766_101088033	3300005921	Soil	MSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
Ga0070766_101239202	3300005921	Soil	MSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY*
Ga0066788_101367791	3300005944	Soil	MGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVSVCSLEAWSCQEAPVRSEERSHHYPADE*
Ga0070712_1007833392	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTHIAPLLPSTDHYMSPILPISFVTTLLCVLVAVDWAFYQQILFVGAALSATVWVCSLEAWSCQEAPVRTEDERGG*
Ga0079220_109218571	3300006806	Agricultural Soil	MSIILPISFIVTLACVLVAIDWALYQQILFVGAALSATVWVCFLESWGCQEASSGGSEESGGPE*
Ga0105240_107237212	3300009093	Corn Rhizosphere	MGHVMSLILPVSFVVTLLCVLLAIDWALYQQILFIGAALSATVWVCALEAWSCQEAPGRREEERRSLSAGE*
Ga0116214_14002561	3300009520	Peatlands Soil	PVLPPIGHVMSLILPISFVATLICVLVAIDWALYQQILFLAAALSATVWVCSLEAWSQEAPTGGDGERGHHYRAE*
Ga0116222_10873344	3300009521	Peatlands Soil	MSLILPISFVATLICVLVAIDWALYQQILFLAAALSATVWVCSLEAWSQEAPTGGDGERGHHYRAE*
Ga0105237_104524412	3300009545	Corn Rhizosphere	MFLILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPGRGEEERRSLSAGE*
Ga0116129_10168953	3300009633	Peatland	MWRIAPILPSLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPATSEDERSQY*
Ga0127503_102910392	3300010154	Soil	MSPILPISFLSTLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSSQEAAAKAEDERGHY*
Ga0127503_106056622	3300010154	Soil	PSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHYRSGRAADRTQG*
Ga0134128_106942741	3300010373	Terrestrial Soil	MSIILPISFIVTLACVLVAIDWALYQQILFVGAALSATVWVCFLESWGCQEAPSGGSEESGGPE*
Ga0105239_132840091	3300010375	Corn Rhizosphere	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPARSDDERSRFSSADE*
Ga0126381_1007751982	3300010376	Tropical Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPARSEDESGPFSPADE*
Ga0126357_12184732	3300010864	Boreal Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPVRSDDESHGYSAGE*
Ga0126346_12713402	3300010865	Boreal Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEHGHY*
Ga0126356_106009241	3300010877	Boreal Forest Soil	LPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEPGHY*
Ga0126350_121411832	3300010880	Boreal Forest Soil	MSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDER
Ga0150983_130366962	3300011120	Forest Soil	MSPILPISFVATLVCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHH*
Ga0150983_148076091	3300011120	Forest Soil	APVLPSLGHDMSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY*
Ga0150983_156307382	3300011120	Forest Soil	GPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE*
Ga0153951_10158992	3300011404	Attine Ant Fungus Gardens	MSPILPISFVATLVCVLFAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPTRNEDEGRRYNPADE*
Ga0153954_10090453	3300011418	Attine Ant Fungus Gardens	MSPILPISFVATLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSSQEAPAPARRADEFGRQE*
Ga0150985_1166921602	3300012212	Avena Fatua Rhizosphere	MSPILPISFVATLLCVLVAINWPLYQQILFVGAALSAAVLVCALEAWSCQEAPARPEDERRGG*
Ga0157369_121841511	3300013105	Corn Rhizosphere	MSLILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPGR
Ga0182024_106630673	3300014501	Permafrost	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVLVCSLEAWSCQEAPVRSEERSHHPADE*
Ga0167644_10050815	3300015206	Glacier Forefield Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVLVCSLEAWSCQEAPVRGEERSHHPADE*
Ga0167644_10136542	3300015206	Glacier Forefield Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPVRSNDESHGHSAGE*
Ga0182036_103527792	3300016270	Soil	MSLILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCREAPPIGEDERSRSDPAGE
Ga0187820_10940192	3300017924	Freshwater Sediment	MSIILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVCACSLEAWGCQEAPARREEERSPHQ
Ga0187783_108512991	3300017970	Tropical Peatland	MGHKMSLILPISFVVTLLCVLLAIDWALYQQILFVGAALSATVWACSLEAWSCREAPATSEEERGRHHQPE
Ga0210407_100476353	3300020579	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPTKSEDERGGY
Ga0210407_108820942	3300020579	Soil	MWRTAPVLPPLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Ga0210403_111200811	3300020580	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPTKSADQ
Ga0210403_113108171	3300020580	Soil	MSPILPISFVATLLCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSCQEAPAKSEDER
Ga0210395_104742861	3300020582	Soil	MSPILPISFVATLLCVLVAINWALYQQVLFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHH
Ga0210395_105798432	3300020582	Soil	VAGVWQMWRMAPVLPSMGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0210400_107610851	3300021170	Soil	SFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPAD
Ga0210400_114948801	3300021170	Soil	MSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHS
Ga0210405_102752092	3300021171	Soil	MSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY
Ga0210408_100188785	3300021178	Soil	MSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Ga0210396_101795094	3300021180	Soil	MGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0210393_103076491	3300021401	Soil	MSPILPISFLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVTSEDERSHPHPADE
Ga0210397_108421281	3300021403	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPARSEDERSHSYRVDE
Ga0210389_101658443	3300021404	Soil	MWRTAPVLPSLGHDMSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAAKTEDEHGHY
Ga0210386_105083862	3300021406	Soil	MSPILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQEAPAKSEDEGGHS
Ga0210386_107757862	3300021406	Soil	MSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0210383_117451052	3300021407	Soil	MSAIVPISFVLTLVCVLVAIDWALYQQLLFVGAAVSATVWACSLEAWSCQPAPARSDGERSLANPADE
Ga0210391_115211792	3300021433	Soil	FLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVRSEDERSHPYLADE
Ga0210390_101817651	3300021474	Soil	MSPILPISFVATLLCVLVAIDWAFYQQILFVGAALSATVWVCSLEAWSTQAAPVSEDARSHPYADEQS
Ga0210390_110962672	3300021474	Soil	VWQMWRIAPVLPSMGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQGAPVRSEDERGQSYPADE
Ga0210390_111594791	3300021474	Soil	SPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY
Ga0210390_115057052	3300021474	Soil	MSAIVPISFVLTLVCVLVAIDWALYQQLLFVGAAVSATVWACSLEAWSCQPAPARSDGERSLANPADD
Ga0210392_106516462	3300021475	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALWATVWVCSLEAWSCQEAPAKSEDEHGHGHY
Ga0210392_107898701	3300021475	Soil	FLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVTSEDERSHPHPADE
Ga0210410_104171332	3300021479	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPARSEDERTHSYRADE
Ga0210409_101577081	3300021559	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGQH
Ga0213851_17680841	3300021860	Watersheds	TAPVLPPLGQDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Ga0242659_11393781	3300022522	Soil	APVLPSLGHDMSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY
Ga0242663_11069312	3300022523	Soil	WRTAPVLPPLGHDMSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Ga0242658_11724151	3300022530	Soil	RPPFAEYGEQRQVMPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEHGHGHY
Ga0242655_102730641	3300022532	Soil	PVLPPLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHS
Ga0242665_101917832	3300022724	Soil	MWRTAPVLPPLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHS
Ga0242654_102791202	3300022726	Soil	QVMPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPTKSEDERGGY
Ga0208586_10229092	3300025588	Arctic Peat Soil	MSPILPISFVATLLCVLVAIDWAWYQQVLFVGAALSATVWVCSLEAWSCQEAPAKTEDNRGHYYPAE
Ga0208480_10023474	3300025633	Arctic Peat Soil	MSPILPISFVATLLCVLVAIDWAWYQQVLFVGAALSATVWVCSLEAWSCQEAPAKTEDDRGHYYPAE
Ga0208589_11496801	3300025634	Arctic Peat Soil	MSPILPISFVATLLCVLVAIDWAWYQQVLFVGAALSATVWVCSLEAWSCQEAPAKTEDNRGHYYPA
Ga0207695_105403842	3300025913	Corn Rhizosphere	MSLILPVSFVVTLLCVLLAIDWALYQQILFIGAALSATVWVCALEAWSCQEAPGRREEERRSLSAGE
Ga0209421_11160771	3300027432	Forest Soil	MSPILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQEAPAKSEDERSP
Ga0209218_11203292	3300027505	Forest Soil	QMWRMAPVLPSMGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0209115_10061302	3300027567	Forest Soil	MWPAFGKMWRMAPVLPSMGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0208042_10474252	3300027568	Peatlands Soil	MWRNAPVLPPMGHVMSLILPISFVATLICVLVAIDWALYQQILFLAAALSATVWVCSLEAWSQEAPTGGDGERGHHYRAE
Ga0209525_10828152	3300027575	Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEHGHGHY
Ga0209221_10368782	3300027609	Forest Soil	MWRIAPILPSLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPATSEDERSQY
Ga0209221_10981991	3300027609	Forest Soil	MSPILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQEAPAKSEDERSPY
Ga0209330_10083353	3300027619	Forest Soil	MSPILPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCEEAPAKREDEHGHH
Ga0208565_10911691	3300027662	Peatlands Soil	MSLILPISFVATLICVLVAIDWALYQQILFLAAALSATVWVCSLEAWSQEAPTGGDGERGHHYR
Ga0209693_100246682	3300027855	Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHY
Ga0209693_101920922	3300027855	Soil	MWPAFGKCGEWRQSCRQLGPEMSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDERGQSYPADE
Ga0209167_100276484	3300027867	Surface Soil	MSIILPISFVATLLCVLVAIDWPLYQQILFLGAALSATVCACSLEAWGCQEAPARREEERSPHE
Ga0209169_102165372	3300027879	Soil	MSPVLPISFVVTLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCQGAPVRSEDEHGQNYPSDE
Ga0209275_100426562	3300027884	Soil	MSPILPISFVATLLCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSCQEAPAKSEDERGHH
Ga0209624_1000091212	3300027895	Forest Soil	MGHVMSPILPISFLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVTSEDERSHPHPADE
Ga0209624_104184442	3300027895	Forest Soil	VRPQFGEYGEQRQVLPSLGHTMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGPY
Ga0209006_101455502	3300027908	Forest Soil	MSPILPISFLATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQAPVRSEDERSHPYLADE
Ga0209006_102239153	3300027908	Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEEEHGHY
Ga0209006_111731841	3300027908	Forest Soil	LPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDEPGHY
Ga0209006_112840872	3300027908	Forest Soil	WRMWRTAPVLPSLGHDMSPILPISFVATLLCVLVAVDWALYQQILFVGAALSATVWVCSLEAWSCQEATAKSEDERGQY
Ga0222748_11112821	3300029701	Soil	APVLPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPTKSEDERGGY
Ga0311338_116200142	3300030007	Palsa	MSPILPISFVSTLLCVLLAIDWALYQQVLFVGAALSATVWVCALEAWSCQDAPARGDEERGG
Ga0310038_100758662	3300030707	Peatlands Soil	MSLILPISFVATLICVLVAIDWALYQQILFLAAALSATVWVCSLEAWSQEAPTGGDGERGHHYRAE
Ga0307482_11337781	3300030730	Hardwood Forest Soil	RASLPSMGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQAAPASEDERSRPYSDE
Ga0265459_141029651	3300030741	Soil	SSLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERSPY
Ga0265762_11272261	3300030760	Soil	MWRTAPILPSLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERSPY
Ga0074012_100675492	3300031029	Soil	MGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVLVCSLEAWSCQEAPVKSEERSHPYPADE
Ga0170824_1061979912	3300031231	Forest Soil	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGGY
Ga0170820_105502562	3300031446	Forest Soil	PSMGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQAPVRSEDERSHHHLADE
Ga0170818_1009318221	3300031474	Forest Soil	QTHSAAVSRMWRAAPVLPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERGGY
Ga0310686_1039319873	3300031708	Soil	MSPILPISFVVTLLCVLVAINWPLYQQILFVGAALSATVWVCALEAWSCQEAPARSDEEGGG
Ga0310686_1102241032	3300031708	Soil	MWRTAPILPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERSPY
Ga0310686_1156352342	3300031708	Soil	MGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVLVCSLEAWSCQEASVRSDELSHHPADE
Ga0310686_1198818832	3300031708	Soil	MSPILPISFVATLLCVLIAVDWALYQQVLFVGAALSATVWVCALEAWSCQEASVRPDDERRSHSADE
Ga0307474_107238781	3300031718	Hardwood Forest Soil	RSGTNPFDDRFANVAKRASLPSMGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQAAPASEDERSRPYSDE
Ga0306917_108413141	3300031719	Soil	MSLILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCREAPAIGEDKRSRSDPAGE
Ga0318557_105417211	3300031795	Soil	PIPPSVGHDMSLILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCREAPAIGEDKRSRSDPAGE
Ga0306925_115458932	3300031890	Soil	PLWTEFRQLWREAPIPPSVGHDMSLILPISFVATLLCVLVAIDWALYQQILFLGAALSATVWACSLEAWSCREAPAIGEDKRSRSDPAGE
Ga0306925_117218512	3300031890	Soil	MSLILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQATPMSEDERSRAYPADE
Ga0306921_120891171	3300031912	Soil	ISFVATLLCVLVAIDWALYQQILFVGAALSATVWACSLEAWSCREAPAIGEDKRSRSDPAGE
Ga0308175_1000572295	3300031938	Soil	MAKRASLPLSGHAMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQDRPARDEERGG
Ga0306920_1015241852	3300032261	Soil	MSLILPISFVATLLCVLVAIDWALYQQILFVGAVLSATVWACSLEAWSCREAPAIGEDKRSRSDPAGE
Ga0348332_111997492	3300032515	Plant Litter	TMGHVMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVLVCSLEAWSCQEASVRSDELSHHPADE
Ga0348332_130026212	3300032515	Plant Litter	MSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCALEAWSCQEAPVRSNDEGHGE
Ga0348332_130601622	3300032515	Plant Litter	MSPILPISFVVTLLCVVVAINWPLYQQILFVGAALSATVWVCALEAWSCQEAPARSDEEGGG
Ga0348332_133710731	3300032515	Plant Litter	APILPSLGHDMSPILPISFVATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPAKSEDERSPY
Ga0315742_129541862	3300032756	Forest Soil	PILPSLGHDMSPILPISFVATLLCVLVAIDWPLYQQILFVGAALSATVWVCALEAWSCQEAPAKSENEGGHS
Ga0315742_131621462	3300032756	Forest Soil	PILPSLGHDMSPILPISFVATLVCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSCQEAPATSEDERSQY
Ga0335078_109211683	3300032805	Soil	MWRAVSFLPPADHQMSLVLPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQATAVSEDERSRLDPTEE
Ga0335074_101895692	3300032895	Soil	MGRDMSLILPISFVVTLLCVLLAIDWPLYQQILFLGAALSATVWACSLEAWSCQEAPVRSEDEPRRAHPADE
Ga0335074_105869512	3300032895	Soil	MGRDMSLILPISFVVTLLCVLLAIDWPLYQQVLFLGAALSATVWACSLEAWSCQEAPVRSEDEPRRAHPADE
Ga0335074_111681101	3300032895	Soil	MGRDMSLILPISFVVTLLCVLLAIDWPLYQQILFLGAALSATVWACSLEAWSCQEASVRSEDEPRRAHPADE
Ga0335075_100922794	3300032896	Soil	MWVPKMSAILPISFVVTLLCVLLAIDWPLYQQVLFLGAALSATVWVCSLEAWSTRGAPVSEDEPGRPYAADE
Ga0335075_107347232	3300032896	Soil	MWRMVSFPPQMGRDMSIVLPVSFLATLLCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSSRGPPASPDDRGGSYSADE
Ga0335072_107607473	3300032898	Soil	MVNFSPPFVPCREQIRGVGASRMWRAVSFLPPVDHQMSLVLPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQAAAV
Ga0335072_108191032	3300032898	Soil	MSIVLPVSFLATLLCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSSRGPPASPDDRGGSYSADE
Ga0335072_117460131	3300032898	Soil	MGRDMSLILPISFVVTLLCVLLAIDWPLYQQILFLGAALSATVWACSLEAWSCQEAPVRSED
Ga0335073_100456555	3300033134	Soil	MSLVLPISFLATLLCVLVAIDWALYQQILFVGAALSATVWVCSLEAWSTQAAAVSEDERSRLDPTEE
Ga0335073_104981531	3300033134	Soil	MSIVLPLSFLATLLCVLVAIDWALYQQVLFVGAALSATVWVCSLEAWSSRGPPASP
Ga0335073_110247102	3300033134	Soil	MGRDMSLILPISFVVTLLCVLLAIDWPLYQQILFLGAALSATVWACSLEAWSCQEAPVRSEDEPRRAHPPDE
Ga0335073_112208942	3300033134	Soil	MSLILPISFVVTLLCVLLAIDWPLYQQALFLGAALSATVWACSFEAWSCQTASVRADDERGRSQPADE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045252

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences