Metagenome / Metatranscriptome Family F045264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045264
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	68 residues
Representative Sequence	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Number of Associated Samples	123
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.19 %
% of genes near scaffold ends (potentially truncated)	33.99 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.183 % of family members)
Environment Ontology (ENVO)	Unclassified (30.719 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.163 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.27% β-sheet: 0.00% Coil/Unstructured: 36.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF01323	DSBA	32.68
PF10142	PhoPQ_related	12.42
PF00106	adh_short	1.31
PF10397	ADSL_C	1.31
PF00196	GerE	1.31
PF13561	adh_short_C2	1.31
PF00296	Bac_luciferase	1.31
PF02826	2-Hacid_dh_C	1.31
PF12867	DinB_2	1.31
PF13533	Biotin_lipoyl_2	1.31
PF12697	Abhydrolase_6	0.65
PF14870	PSII_BNR	0.65
PF01471	PG_binding_1	0.65
PF12762	DDE_Tnp_IS1595	0.65
PF02515	CoA_transf_3	0.65
PF01546	Peptidase_M20	0.65
PF01281	Ribosomal_L9_N	0.65
PF02518	HATPase_c	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.31
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.65
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
All Organisms	root	All Organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.53 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.65 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.57 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.65 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.58 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.92 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.65 %
unclassified Candidatus Hydrogenedentes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	6.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.58 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.96 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.65 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	6.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.58 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
Crenalkalicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus	0.65 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.65 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	6.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.58 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.96 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.65 %
Crenalkalicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	0.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Sinorhizobium meliloti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	6.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.58 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.96 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.65 %
Crenalkalicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	0.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.65 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01BB3PE	Not Available	515	Open in IMG/M
3300001867\|JGI12627J18819_10197932	Not Available	811	Open in IMG/M
3300002568\|C688J35102_118170116	Not Available	535	Open in IMG/M
3300002914\|JGI25617J43924_10122971	Not Available	913	Open in IMG/M
3300003219\|JGI26341J46601_10200171	Not Available	542	Open in IMG/M
3300003505\|JGIcombinedJ51221_10171865	Not Available	877	Open in IMG/M
3300004080\|Ga0062385_10302912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300004082\|Ga0062384_100106299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1512	Open in IMG/M
3300004091\|Ga0062387_100661149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300004091\|Ga0062387_101734922	Not Available	508	Open in IMG/M
3300004152\|Ga0062386_100044845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3318	Open in IMG/M
3300004635\|Ga0062388_100120884	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300005167\|Ga0066672_10186270	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300005174\|Ga0066680_10263289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1097	Open in IMG/M
3300005176\|Ga0066679_10167887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1384	Open in IMG/M
3300005177\|Ga0066690_10424114	Not Available	902	Open in IMG/M
3300005187\|Ga0066675_10428101	Not Available	981	Open in IMG/M
3300005332\|Ga0066388_100666717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1652	Open in IMG/M
3300005434\|Ga0070709_10095108	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300005434\|Ga0070709_10608419	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005435\|Ga0070714_100464576	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005437\|Ga0070710_10153084	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300005437\|Ga0070710_11096610	Not Available	584	Open in IMG/M
3300005439\|Ga0070711_100385435	Not Available	1134	Open in IMG/M
3300005439\|Ga0070711_100487837	Not Available	1014	Open in IMG/M
3300005454\|Ga0066687_10076298	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300005552\|Ga0066701_10880844	Not Available	531	Open in IMG/M
3300005555\|Ga0066692_10842904	Not Available	563	Open in IMG/M
3300005559\|Ga0066700_10900244	Not Available	588	Open in IMG/M
3300005561\|Ga0066699_10015220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4029	Open in IMG/M
3300005561\|Ga0066699_10047284	Not Available	2619	Open in IMG/M
3300005569\|Ga0066705_10973097	Not Available	503	Open in IMG/M
3300005575\|Ga0066702_10128443	Not Available	1480	Open in IMG/M
3300005575\|Ga0066702_10860709	Not Available	540	Open in IMG/M
3300005587\|Ga0066654_10540255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300005587\|Ga0066654_10591775	Not Available	614	Open in IMG/M
3300005598\|Ga0066706_10350040	Not Available	1171	Open in IMG/M
3300005598\|Ga0066706_10820827	Not Available	731	Open in IMG/M
3300005602\|Ga0070762_10030360	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300005610\|Ga0070763_10279085	Not Available	913	Open in IMG/M
3300005610\|Ga0070763_10848423	Not Available	542	Open in IMG/M
3300005764\|Ga0066903_101953939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1125	Open in IMG/M
3300005921\|Ga0070766_10050730	Not Available	2331	Open in IMG/M
3300006046\|Ga0066652_101098957	Not Available	753	Open in IMG/M
3300006175\|Ga0070712_100164822	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300006175\|Ga0070712_100331997	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300006755\|Ga0079222_11898006	Not Available	581	Open in IMG/M
3300006796\|Ga0066665_10577068	Not Available	910	Open in IMG/M
3300006800\|Ga0066660_10736290	Not Available	806	Open in IMG/M
3300006893\|Ga0073928_11136742	Not Available	528	Open in IMG/M
3300006954\|Ga0079219_10133752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1291	Open in IMG/M
3300007788\|Ga0099795_10380386	Not Available	637	Open in IMG/M
3300009137\|Ga0066709_100418166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1865	Open in IMG/M
3300009137\|Ga0066709_102688269	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300009143\|Ga0099792_10873921	Not Available	593	Open in IMG/M
3300010159\|Ga0099796_10044103	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300010358\|Ga0126370_10904127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300010376\|Ga0126381_101237105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300011120\|Ga0150983_12145437	Not Available	961	Open in IMG/M
3300011120\|Ga0150983_13878516	Not Available	631	Open in IMG/M
3300012198\|Ga0137364_10217980	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300012202\|Ga0137363_10849802	Not Available	775	Open in IMG/M
3300012205\|Ga0137362_10394486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1199	Open in IMG/M
3300012212\|Ga0150985_121955199	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300012917\|Ga0137395_10565146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	821	Open in IMG/M
3300012924\|Ga0137413_10746076	Not Available	747	Open in IMG/M
3300014150\|Ga0134081_10353009	Not Available	540	Open in IMG/M
3300014497\|Ga0182008_10527368	Not Available	653	Open in IMG/M
3300015371\|Ga0132258_10727834	Not Available	2499	Open in IMG/M
3300018468\|Ga0066662_10602074	Not Available	1028	Open in IMG/M
3300018468\|Ga0066662_11958599	Not Available	613	Open in IMG/M
3300018482\|Ga0066669_11162067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300018482\|Ga0066669_12246528	Not Available	519	Open in IMG/M
3300020579\|Ga0210407_10391485	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300020580\|Ga0210403_10005199	All Organisms → cellular organisms → Bacteria → Proteobacteria	11101	Open in IMG/M
3300020580\|Ga0210403_10067663	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300020581\|Ga0210399_10089400	All Organisms → cellular organisms → Bacteria → Proteobacteria	2508	Open in IMG/M
3300020581\|Ga0210399_10981351	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	681	Open in IMG/M
3300020582\|Ga0210395_11182613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	562	Open in IMG/M
3300020583\|Ga0210401_10099999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2725	Open in IMG/M
3300020583\|Ga0210401_10296239	Not Available	1478	Open in IMG/M
3300020583\|Ga0210401_11471042	Not Available	538	Open in IMG/M
3300021168\|Ga0210406_10786533	Not Available	725	Open in IMG/M
3300021171\|Ga0210405_10542039	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300021178\|Ga0210408_10494536	Not Available	972	Open in IMG/M
3300021178\|Ga0210408_11308123	Not Available	549	Open in IMG/M
3300021178\|Ga0210408_11429578	Not Available	520	Open in IMG/M
3300021377\|Ga0213874_10067645	Not Available	1133	Open in IMG/M
3300021403\|Ga0210397_10731864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	761	Open in IMG/M
3300021404\|Ga0210389_11089275	Not Available	618	Open in IMG/M
3300021405\|Ga0210387_10281838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Crenalkalicoccus → Crenalkalicoccus roseus	1459	Open in IMG/M
3300021441\|Ga0213871_10265535	Not Available	548	Open in IMG/M
3300021560\|Ga0126371_10147528	All Organisms → cellular organisms → Bacteria → Proteobacteria	2410	Open in IMG/M
3300022507\|Ga0222729_1048964	Not Available	580	Open in IMG/M
3300022523\|Ga0242663_1109825	Not Available	558	Open in IMG/M
3300022525\|Ga0242656_1028871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	875	Open in IMG/M
3300022528\|Ga0242669_1096330	Not Available	568	Open in IMG/M
3300022528\|Ga0242669_1097749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	565	Open in IMG/M
3300022529\|Ga0242668_1118090	Not Available	556	Open in IMG/M
3300022529\|Ga0242668_1131473	Not Available	536	Open in IMG/M
3300022530\|Ga0242658_1139864	Not Available	615	Open in IMG/M
3300022531\|Ga0242660_1009952	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300022708\|Ga0242670_1022666	Not Available	762	Open in IMG/M
3300022712\|Ga0242653_1047870	Not Available	688	Open in IMG/M
3300022724\|Ga0242665_10179832	Not Available	686	Open in IMG/M
3300022726\|Ga0242654_10042482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300022726\|Ga0242654_10084145	Not Available	971	Open in IMG/M
3300025906\|Ga0207699_10374727	Not Available	1009	Open in IMG/M
3300025915\|Ga0207693_10195933	Not Available	1589	Open in IMG/M
3300026312\|Ga0209153_1052901	Not Available	1443	Open in IMG/M
3300026312\|Ga0209153_1161510	Not Available	824	Open in IMG/M
3300026322\|Ga0209687_1048122	Not Available	1384	Open in IMG/M
3300026356\|Ga0257150_1003565	All Organisms → cellular organisms → Bacteria → PVC group	2076	Open in IMG/M
3300026489\|Ga0257160_1027145	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300026551\|Ga0209648_10213554	Not Available	1460	Open in IMG/M
3300026552\|Ga0209577_10191552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1577	Open in IMG/M
3300026984\|Ga0208732_1012935	Not Available	710	Open in IMG/M
3300026998\|Ga0208369_1002900	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300026999\|Ga0207949_1004748	Not Available	1219	Open in IMG/M
3300027069\|Ga0208859_1004234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1517	Open in IMG/M
3300027070\|Ga0208365_1004489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium meliloti	1665	Open in IMG/M
3300027173\|Ga0208097_1004757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1386	Open in IMG/M
3300027371\|Ga0209418_1086429	Not Available	563	Open in IMG/M
3300027537\|Ga0209419_1018791	Not Available	1248	Open in IMG/M
3300027635\|Ga0209625_1033538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300027635\|Ga0209625_1083068	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027651\|Ga0209217_1145443	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300027701\|Ga0209447_10024351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1695	Open in IMG/M
3300027727\|Ga0209328_10195189	Not Available	611	Open in IMG/M
3300027737\|Ga0209038_10034751	Not Available	1501	Open in IMG/M
3300027737\|Ga0209038_10094411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300027812\|Ga0209656_10412703	Not Available	603	Open in IMG/M
3300027824\|Ga0209040_10050850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2499	Open in IMG/M
3300027855\|Ga0209693_10124872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1273	Open in IMG/M
3300027903\|Ga0209488_10151602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1750	Open in IMG/M
3300027903\|Ga0209488_10263112	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300031057\|Ga0170834_100955669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300031057\|Ga0170834_102705904	Not Available	512	Open in IMG/M
3300031122\|Ga0170822_15940414	Not Available	500	Open in IMG/M
3300031231\|Ga0170824_127036064	Not Available	1387	Open in IMG/M
3300031469\|Ga0170819_16656165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300031681\|Ga0318572_10866797	Not Available	536	Open in IMG/M
3300031708\|Ga0310686_112833990	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031718\|Ga0307474_10495541	Not Available	958	Open in IMG/M
3300031744\|Ga0306918_10648625	Not Available	827	Open in IMG/M
3300031753\|Ga0307477_10048074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2933	Open in IMG/M
3300031753\|Ga0307477_10081782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2238	Open in IMG/M
3300031805\|Ga0318497_10731125	Not Available	555	Open in IMG/M
3300031823\|Ga0307478_10335384	Not Available	1244	Open in IMG/M
3300031954\|Ga0306926_11069302	Not Available	956	Open in IMG/M
3300031954\|Ga0306926_11239634	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.73%
Host-Associated	Host-Associated	3.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Aquatic	Environmental → Aquatic	8.50%
Plants	Host-Associated → Plants	3.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Freshwater	Environmental → Aquatic → Freshwater	7.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.36%
Loam	Environmental → Terrestrial → Soil → Loam	22.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.31%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.31%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.65%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_4989140	2040502001	Soil	LRRLWRLVGWFVVVDALITIFGVTTAPLLVCAALDIAAGLLVIRSYMEIRGGVRPVPLIAARPVTRFGEGG
JGI12627J18819_101979321	3300001867	Forest Soil	LEFNGSAEERQLRRLWRLFGWFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR*
C688J35102_1181701161	3300002568	Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVVRSCREMRAQFFVAFATAVKSSYLEGGC*
JGI25617J43924_101229712	3300002914	Grasslands Soil	LRRLWRLLGWFVVVEALITVFGVSTAPLILSLALDAAIGLLVIRSYMEMRARFSVAFATAAKPGYPEGGD*
JGI26341J46601_102001711	3300003219	Bog Forest Soil	LRRLWRLVGWFVVVDALITIFGVTTAPLLVCAALDIAAGLLVIRSYMQMRAGLSVPLTAPVEPGFG
JGIcombinedJ51221_101718653	3300003505	Forest Soil	LRRFWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR*
Ga0062385_103029121	3300004080	Bog Forest Soil	LRRLWGLFGWFVAVDTLIFGVRTAPLLLSLALDLVVGLLVIRSCMETRVRFSLAFATAAESAHSEGGC*
Ga0062384_1001062992	3300004082	Bog Forest Soil	LRRLWGLFGWFVAVDTLITVFGVSTAPLLLSLALDFAVGLLVIRSCMEMRVRFSVAFPTAAESAYSEGGC*
Ga0062387_1006611492	3300004091	Bog Forest Soil	LRRLWGLFGWFVVVDALITVFGVSTAPLLLSLALDFAVGLLVIRSCMEMRVRFSAAFATAAESACSEGGC*
Ga0062387_1017349221	3300004091	Bog Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAAATAAASGYPEGGA*
Ga0062386_1000448454	3300004152	Bog Forest Soil	LRRLWRLVGWFVVVDALITIFGVTTAPLLVCAALDIAAGLLVIRSYMQMRAGLSVPLTAPVEPGFGEGG*
Ga0062388_1001208841	3300004635	Bog Forest Soil	LRRLWRLFGWFVVVEALITAFGVITAPLLLSLALDGAVGLLVIRSCMEIRPRFFVAFATAVRSAYREGGC*
Ga0066672_101862702	3300005167	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSIALDAAVGFLVIRSCMEMRARFSVALATAAIPGDPEGGV*
Ga0066680_102632891	3300005174	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGFLVIRSCMEMRVRFSVALATAAIPGDPEGGV*
Ga0066679_101678872	3300005176	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEMRARFSVALATAAISGDPEGGV*
Ga0066690_104241143	3300005177	Soil	WRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEMRARFSVALATAAISGDPEGGV*
Ga0066675_104281012	3300005187	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEIRARFSVALATAAISGDPEGGV*
Ga0066388_1006667172	3300005332	Tropical Forest Soil	LRPWWRLFGWFVVVEASIAAFGVTTAPLLLFLALDVVIGLLIFRSLMGRRLGFSVALATATRSALPRGGR*
Ga0070709_100951082	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LRRLWRLVGWFVVVDALITVFGVITAPLLLSLAVDTAVGLLVIRSYREMKAGFSVALVTVAKPGYREGG*
Ga0070709_106084191	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD*
Ga0070714_1004645762	3300005435	Agricultural Soil	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGN*
Ga0070710_101530843	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSIALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD*
Ga0070710_110966101	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GWFVVVEALITAFGLITVPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARSAKSSFMEGGR*
Ga0070711_1003854353	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LILRLRRGNLRRLWRLVGWFVVVDALITVFGVITAPLLLSLAVDTAVGLLVIRSYREMKAGFSVALVTVAKPGYREGG*
Ga0070711_1004878373	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LRRLWRLFGWFVVVEASITVFGITTAPLLLFLALDVVIGLLIIRSCMERRAGFSVALATAARSGIPEGGR*
Ga0066687_100762982	3300005454	Soil	LRRLWSLFGWLVMVNGLITVFGVTTAPLLLCLALDAVVGVLVVRSCMETRAAASVALATAARSGYPKGGG*
Ga0066701_108808442	3300005552	Soil	MRRLWRLVGWFVVVDALITVFGVTTAPLLLCAALDIAAGLLVIRSIMEMRAGLTFALATAAKPGLREGG*
Ga0066692_108429043	3300005555	Soil	MRRLWRLVGWFVVVDALITVFGVTTAPLLLCAALDIAAGLLVIRSIMEMRAGLTFALATAAKPGFREGG*
Ga0066700_109002441	3300005559	Soil	LRRLWRLFGWFVVVDALITIFGVTTAPLLLSLALDAAVGLFVIRSCMEIRAGLPVALAVAAKSGYREGGR*
Ga0066699_100152204	3300005561	Soil	LRRLWSLFGWLVMVNGLITVFGVTTAPLLLWLALDAVVGVLVVRSCMETRAAASVALATAARSGYPKGGG*
Ga0066699_100472842	3300005561	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAIGLLVIRSCVEMRARFSVALATAAISGDPEGGV*
Ga0066705_109730971	3300005569	Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRGRFFVAFATA
Ga0066702_101284431	3300005575	Soil	LRRLWSLFGWLVVVNGLITVFGVTTAPLLLCLALDAVVGVLVVRSCMETRAAASVALATAARSGYPKGGG*
Ga0066702_108607091	3300005575	Soil	VVDALITVFGVSTEPVLLSLALDAAVGLLVIRSYMEMRAKFSVAFATGAESGCQEGGC*
Ga0066654_105402552	3300005587	Soil	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVPFATAAKSGYPESGK*
Ga0066654_105917752	3300005587	Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRGRFFVAFATARTSGYREGGC*
Ga0066706_103500401	3300005598	Soil	EERQLRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEIRARFSVALATAAISGDPGGGV*
Ga0066706_108208272	3300005598	Soil	VVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRGRVFVAFATARTSGYRERGC*
Ga0070762_100303602	3300005602	Soil	LRRLWRLFGWFVMVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYIEMRARFSVAFATAAKPGYPEGGD*
Ga0070763_102790853	3300005610	Soil	LFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR*
Ga0070763_108484232	3300005610	Soil	LRRLWRLFGWFVVVDALITVFGVNTAPLLLSMALDAAVGLLVIRSYMEMRARLSVAFATAAKSGYPEGGD*
Ga0066903_1019539393	3300005764	Tropical Forest Soil	LRPWWRLFGWFVVVEASIAAFGVTTAPLLLFLALDVVIGLLIFRSLMGRRLGFSGAFATATRSALPRGGR*
Ga0070766_100507302	3300005921	Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR*
Ga0066652_1010989571	3300006046	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEIRARFSVALATAAIPGSPEGGA*
Ga0070712_1001648224	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EERQLRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGN*
Ga0070712_1003319971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RRLWRLFGWFVVVEASITVFGITTAPLLLFLALDVVIGLLIIRSCMERRAGFSVALATAARSGIPEGGR*
Ga0079222_118980062	3300006755	Agricultural Soil	LRRFWQLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGK*
Ga0066665_105770683	3300006796	Soil	LRRLWRLVGWFVVVDALITVFGVTTAPLLLCAALDIAAGLLVIRSIMEMRAGLTFALATAAKPGFREGG*
Ga0066660_107362901	3300006800	Soil	VVEALIMGFGMITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFATAAKSDYGEGGC*
Ga0073928_111367421	3300006893	Iron-Sulfur Acid Spring	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATADKSGYPEGGN*
Ga0079219_101337522	3300006954	Agricultural Soil	LRRLWRLFGWLVVVNGLITVFGVTTAPLVLCLALDAVVGLLVVRSCMETRAASSVALATSDYPEGSG*
Ga0099795_103803863	3300007788	Vadose Zone Soil	PLRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVPFATAAKSGYPEGGK*
Ga0066709_1004181662	3300009137	Grasslands Soil	LAKERQLRRLWRLFGWVVVVDALIRAFGVSTEPLLLSIALDAAIGLLVIRSCVEMRARFSVALATAAISGDPEGGV*
Ga0066709_1026882691	3300009137	Grasslands Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRGRFFVAFATARTSGY
Ga0099792_108739212	3300009143	Vadose Zone Soil	LRRLWRLFGWFVVVEALITVFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGK*
Ga0099796_100441032	3300010159	Vadose Zone Soil	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVPFATAAKSGYPESSK*
Ga0126370_109041271	3300010358	Tropical Forest Soil	VVEASIAAFGVTTAPLLLFLALDVVIGLLIVRSLMGRRHGFSVALATATRSALPRGGR*
Ga0126381_1012371052	3300010376	Tropical Forest Soil	LQRLWRLIGWFVVVDLLITVFGETTAPLLLSLALDAVVGLLVMRSYMEMRARSVVAVATGEPR*
Ga0150983_121454371	3300011120	Forest Soil	ERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD*
Ga0150983_138785163	3300011120	Forest Soil	VVVEALITAFGLITVPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARSAKSSFMEGGR*
Ga0137364_102179802	3300012198	Vadose Zone Soil	LKGSAEERQLRRLWRLFGWLVVVNGLITVFGVTTAPLVLCLALDAAVGLLVVRSCMETRAASSVALATSDYPEGSG*
Ga0137363_108498023	3300012202	Vadose Zone Soil	LRRLWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVGLLVIRSCMEMRARFFVPFATAAKSGYPEGGD*
Ga0137362_103944862	3300012205	Vadose Zone Soil	LRRLWRLVGWFVVVDALITVFGVTTAPLLLCAALDIAAGLLVIRSIMEMRAGLTFALATPAKPGLREGG*
Ga0150985_1219551994	3300012212	Avena Fatua Rhizosphere	FVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVPFATAAKSGYPESGK
Ga0137395_105651462	3300012917	Vadose Zone Soil	LRPLWRLVGWFVVVDALITVFGVTTAPLLLCAALDIAAGLLVIRSIMEMRAGLTFALATAAKPGLREGG*
Ga0137413_107460762	3300012924	Vadose Zone Soil	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGD*
Ga0134081_103530093	3300014150	Grasslands Soil	LGRLWRLFGWFVVVDALITVFGVSTAPLLLSIALDAAVGLLVIRSCMEIRARFSVALATAAISGDPEGGV*
Ga0182008_105273682	3300014497	Rhizosphere	LRRLWSLFGWFVVVDALITVFGVTTAPLLLSLALDVMIILLAIRSYKVTRDGLSLALAPAAKPEYQEGGF*
Ga0132258_107278343	3300015371	Arabidopsis Rhizosphere	LRRLWRLFGWLVVVNGLITVFGVTTAPLVLCLALDAVVGLLVVRSCMETRAVSSVALATSDYPEGSG*
Ga0066662_106020742	3300018468	Grasslands Soil	VVRRVDALITIFGVITAPLLLSLALDAVVGLLVIRSCMEMRGQFFVAFATAARSGYREGG
Ga0066662_119585993	3300018468	Grasslands Soil	LRRLWRLFVWFVVVDALITAFGVTVAPLLLSIALDAAVALFVIRSYIKMRARFSVALATAAIAGEPEGGV
Ga0066669_111620673	3300018482	Grasslands Soil	LAEERQLRRLWRLCGWFVVVEALITVFGVSTIPLLLSIALDAAVGLLVIRSYMEMRARVSVAFAPAANSGYPEGGD
Ga0066669_122465282	3300018482	Grasslands Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAIGLLVIRSCVEMRARFSVALATAAISGDPEGGV
Ga0210407_103914852	3300020579	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARSSVAF
Ga0210403_100051999	3300020580	Soil	LRRLWRLFGWFVVVEALMTAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0210403_100676634	3300020580	Soil	LRRLWRLFGWFVVVDALITVFGVNTAPLLLSMALDAAVGLLVIRSYMEMRARLSVAFATAAKSGYPEGGD
Ga0210399_100894001	3300020581	Soil	RLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARLSVAFATAAKSGYPEGGD
Ga0210399_109813512	3300020581	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARSSVAFATAAKSGYPEGGD
Ga0210395_111826131	3300020582	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVA
Ga0210401_100999991	3300020583	Soil	VDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFTRAAKSSFMEGGR
Ga0210401_102962392	3300020583	Soil	LRRLWRLFGWFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0210401_114710421	3300020583	Soil	LRRLWRLFGWFVVVEALITAFGLITVPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARSAKSSFMEGGR
Ga0210406_107865331	3300021168	Soil	LRRLWRLVGWFVVVDALITVFGVITAPLLLSLAVDTAVGLLVIRSYREMKAGFSVALVTVAKP
Ga0210405_105420392	3300021171	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKPGYPEGGD
Ga0210408_104945361	3300021178	Soil	QLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYKEMRARFSVAFATAAKPGYLEGGD
Ga0210408_113081233	3300021178	Soil	FWRLFGWFVVVDALITVFGVSTAPLLLSLALDAAVGLLVIRSCMEIRARFFVAFAPAARPAYREGGG
Ga0210408_114295781	3300021178	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLILSLALDAAIGLLVIRSYMEMRARFSVAFATAAKPGYPEGGD
Ga0213874_100676452	3300021377	Plant Roots	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSLALDAAIGLLVIRSYREMRASFSVAFAAAATSASPEGGD
Ga0210397_107318642	3300021403	Soil	LRRFWRLFGWFVVVDALITVFGVSTAPLLLSLALDAAVGLLVIRSCMEIRARFFVAFAPAARPAYREGGG
Ga0210389_110892751	3300021404	Soil	GWFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0210387_102818384	3300021405	Soil	EFNGSAEERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSIALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0210386_104983871	3300021406	Soil	ALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0210394_109244062	3300021420	Soil	DALITVFGVSTAPLLLSLALDAAVGLLVIRSCMEIRARFFVAFAPAARPAYREGGG
Ga0213871_102655351	3300021441	Rhizosphere	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFAGFATAARSGYREGGC
Ga0126371_101475284	3300021560	Tropical Forest Soil	LRPWWRLFGWFVVVEASIAAFGVTTAPLLLFLALDVVIGLLIFRSLMGRRLGFSGAFATATRSALPRGGR
Ga0222729_10489641	3300022507	Soil	EERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242663_11098252	3300022523	Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMETRARSSVAFATAAKSGYPEGGD
Ga0242656_10288712	3300022525	Soil	LRRLWRLFGWFVVVDALITVFGVNTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242669_10963303	3300022528	Soil	VIDALITVFGVSTAPLLLSMALDATVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242669_10977493	3300022528	Soil	QLRRLWRLFGWFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0242668_11180901	3300022529	Soil	ERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYREMRARSSVAFATAAKSGYPEGGD
Ga0242668_11314732	3300022529	Soil	LRRFWRLFGWFVVVDALITVFGVNTAPLLLSMALDAAVGLLVIRSYMEMRARLSVAFATAAKSGYPEGGD
Ga0242658_11398643	3300022530	Soil	RLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARSSVAFATAAKSGYPEGGD
Ga0242660_10099524	3300022531	Soil	VDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242670_10226663	3300022708	Soil	EFNGSAEERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMETRARSSVAFATAAKSGYPEGGD
Ga0242653_10478701	3300022712	Soil	RRLWRLFGWFVVVDALITVFGVNTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242665_101798323	3300022724	Soil	GWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARSSVAFATAAKSGYPEGGD
Ga0242654_100424824	3300022726	Soil	SAEERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0242654_100841453	3300022726	Soil	LRRLWRLVGWFVVVDALITVFGVITAPLLLSLAVDTAVGLLVIRSYMEMRARSSVAFATAAKSGYPEGGD
Ga0207699_103747271	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SRILILRLRRGNLRRLWRLVGWFVVVDALITVFGVITAPLLLSLAVDTAVGLLVIRSYREMKAGFSVALVTVAKPGYREGG
Ga0207693_101959334	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RRLWRLFGWFVVVEASITVFGITTAPLLLFLALDVVIGLLIIRSCMERRAGFSVALATAARSGIPEGGR
Ga0209153_10529013	3300026312	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEMRARFSVALATAAISGDPEGGV
Ga0209153_11615101	3300026312	Soil	LRRLWSLFGWLVVVNGLITVFGVTTAPLLLCLALDAVVGVLVVRSCMETRAAASVALATAARSGYPKGGG
Ga0209687_10481223	3300026322	Soil	LRRLWRLFGWFVVVDALITAFGVSTAPLLLSIALDAAVGLLVIRSCMEIRARFSVALATAAISGDPEGGV
Ga0257150_10035652	3300026356	Soil	LRRLWRLFGWFVVVEALITVFGVGTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0257160_10271452	3300026489	Soil	LRRLWRLFGWFVVVEALITVFGVSTAPLLLSMALDAAVGLLVIRSCIEMRARFSVAFPTAAKSGCPEGGD
Ga0209648_102135544	3300026551	Grasslands Soil	LRRLWRLLGWFVVVEALITVFGVSTAPLILSLALDAAIGLLVIRSYMETRARFSVAFATAAKPGYPEGGD
Ga0209577_101915522	3300026552	Soil	LRRLWSLFGWLVMVNGLITVFGVTTAPLLLCLALDAVVGVLVVRSCMETRAAASVALATAARSGYPKGGG
Ga0208732_10129351	3300026984	Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFAAAKSGYPEGGD
Ga0208369_10029002	3300026998	Forest Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0207949_10047482	3300026999	Forest Soil	LRRFWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0208859_10042342	3300027069	Forest Soil	LRRFWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0208365_10044892	3300027070	Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSVALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0208097_10047572	3300027173	Forest Soil	LRRFWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSSMSGGH
Ga0209418_10864291	3300027371	Forest Soil	LRRLWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRGRFFVACATAACSGYREGGC
Ga0209419_10187912	3300027537	Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYIEMRARFSVAFATAAKSGYPEGGD
Ga0209625_10335381	3300027635	Forest Soil	WFVVVDALITVFGASTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKPGYPEGG
Ga0209625_10830682	3300027635	Forest Soil	LRRFWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYLEMRARLSIVFVTAVKSGYPEGG
Ga0209217_11454432	3300027651	Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSSMEMRARFSVAFATAAKSGYPEGGD
Ga0209447_100243512	3300027701	Bog Forest Soil	LRRLWGLFGWFVVVDALITVFGVSGVPLLLSLALDFAVGLLVIRSCMEMRVRFSAAFATAAESACSEGGC
Ga0209328_101951891	3300027727	Forest Soil	LRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPE
Ga0209038_100347512	3300027737	Bog Forest Soil	LRRLWRLFGWFVVVEALITAFGVITAPLLLSLALDGAVGLLVIRSCMEIRPRFFVAFATAVRSAYREGGC
Ga0209038_100944112	3300027737	Bog Forest Soil	LRRLWRLFGWFVVVDALITVFGVITALLLLSLALDAAVGLLVIRSCMEMRARFFVAFGTAAKSGYVEGGC
Ga0209656_104127033	3300027812	Bog Forest Soil	LRRLWRLFGWFVVVDGLITIFGVTTAPLLLLSLALDAAVGLLVIHSYTEIRAGLSITLATAAKSGYREGGP
Ga0209040_100508504	3300027824	Bog Forest Soil	LRRLWRLVGWFVVVDALITIFGVTTAPLLVCAALDIAAGLLVIRSYMQMRAGLSVPLTAPVEPGFGEGG
Ga0209693_101248724	3300027855	Soil	RQLRRFWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGGR
Ga0209488_101516024	3300027903	Vadose Zone Soil	LRRLWRLFGWFVVVEALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGCPEGGD
Ga0209488_102631122	3300027903	Vadose Zone Soil	LRRFWRLFGWFVVVDALITLFGVSTAPLLLSLALDAAVALLVIRSCMEMRARFFVRFATAAKSGYPEGGK
Ga0170834_1009556692	3300031057	Forest Soil	LRRLWRLVGWFVVVDALITIFGVTTAPLLVCAALDIAAGLLVIRSYMEIRAGLSVALIAPVEPGFGEGG
Ga0170834_1027059042	3300031057	Forest Soil	LRRFWRLFGWFVVVDALITVFGVSTAPLLLSIALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0170822_159404141	3300031122	Forest Soil	RLWRFFGWFVVVDALITVFGVSTAPLLLSLALDAAVGLVVIRSYMEMRARFSFAFAAAAESGYPEGGV
Ga0170824_1270360642	3300031231	Forest Soil	VVDALITVFGVSTAPLLLSLALDAAVGLVVIRSYMEMRARFSFAFAAAAESGYPEGGV
Ga0170819_166561652	3300031469	Forest Soil	LARLWRFFGWFVVVDALITVFGVSTAPLLLSLALDAAVGLVVIRSYMEMRARFSFAFAAAAESGYPEGGV
Ga0318572_108667973	3300031681	Soil	VRRLWRLFGWFVVVEALITAFGLITAPLLLALALDAAVGLLVIRSCMEIGARFFVTFARAAKSSFMEGGR
Ga0310686_1128339903	3300031708	Soil	LRRLWRLFGWFIVVDALITVFGVSTAPLLLSMALDAAVGLLVIRRYMEMRARFSVAFATAAKSGYPEGGD
Ga0307474_104955411	3300031718	Hardwood Forest Soil	NGSAEERQLRRLWRLFGWFVVVDALITVFGVSTAPLLLSMALDAAVGLLVIRSYMEMRARFSVAFATAAKSGYPEGGD
Ga0306918_106486253	3300031744	Soil	VRRIWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFVTAARFGYREGGC
Ga0307477_100480744	3300031753	Hardwood Forest Soil	LRRLWRLFGWFVVVEALMTAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARA
Ga0307477_100817825	3300031753	Hardwood Forest Soil	WFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFARAAKSSFMEGG
Ga0318497_107311251	3300031805	Soil	IWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARLFVAFVAAARFGYREGGC
Ga0307478_103353842	3300031823	Hardwood Forest Soil	LRRLWRLFGWFVVVEALITAFGLITAPLLLSLALDAAVGLLVIRSCMEMRARFFVAFA
Ga0306926_110693021	3300031954	Soil	FGWFVVVEALITAFGLITAPLLLALALDAAVGLLVIRSCMEIGARFFVTFARAAKSSFMEGGR
Ga0306926_112396342	3300031954	Soil	VRRIWRLFGWFVVVDALITVFGVITAPLLLSLALDAAVGLLVIRSCMEMRARLFVAFVAAARFGYREGGC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences