Metagenome / Metatranscriptome Family F045308

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045308
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	62 residues
Representative Sequence	MTDGHQRQQRPLRAAVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATD
Number of Associated Samples	119
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.62 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.209 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (20.915 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.53% β-sheet: 0.00% Coil/Unstructured: 57.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF03640	Lipoprotein_15	9.80
PF03575	Peptidase_S51	3.27
PF01434	Peptidase_M41	2.61
PF09660	DUF2397	2.61
PF04248	NTP_transf_9	1.96
PF02515	CoA_transf_3	1.96
PF12679	ABC2_membrane_2	1.31
PF03466	LysR_substrate	1.31
PF12802	MarR_2	1.31
PF02771	Acyl-CoA_dh_N	1.31
PF00005	ABC_tran	1.31
PF00501	AMP-binding	0.65
PF01145	Band_7	0.65
PF12680	SnoaL_2	0.65
PF00571	CBS	0.65
PF01636	APH	0.65
PF01209	Ubie_methyltran	0.65
PF00561	Abhydrolase_1	0.65
PF01435	Peptidase_M48	0.65
PF13466	STAS_2	0.65
PF13581	HATPase_c_2	0.65
PF03706	LPG_synthase_TM	0.65
PF00999	Na_H_Exchanger	0.65
PF08241	Methyltransf_11	0.65
PF00441	Acyl-CoA_dh_1	0.65
PF03109	ABC1	0.65
PF13411	MerR_1	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	9.80
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	2.61
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.96
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.96
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	1.96
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.65
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.65
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.65
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.65
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.65
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.65
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.65
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
All Organisms	root	All Organisms	43.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
cellular organisms	root	All Organisms → cellular organisms	43.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.45 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.88 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.27 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.61 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.31 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.27 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.61 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.61 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	1.31 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.65 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.27 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.61 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	1.96 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	1.31 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.65 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.65 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.61 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	1.31 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1.31 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.65 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.65 %
Nonomuraea maritima	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	0.65 %
Kitasatospora cheerisanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora cheerisanensis	0.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.21 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.61 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	1.31 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1.31 %
Blastococcus sp. DSM 44268	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44268	0.65 %
Kitasatospora cheerisanensis KCTC 2395	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora cheerisanensis → Kitasatospora cheerisanensis KCTC 2395	0.65 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.65 %
Nonomuraea maritima	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	0.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101859321	Not Available	575	Open in IMG/M
3300005178\|Ga0066688_10269591	Not Available	1093	Open in IMG/M
3300005338\|Ga0068868_102206985	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005344\|Ga0070661_100226870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1434	Open in IMG/M
3300005434\|Ga0070709_10517692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300005435\|Ga0070714_101378542	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005435\|Ga0070714_101496045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300005436\|Ga0070713_100585662	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300005436\|Ga0070713_102457698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	503	Open in IMG/M
3300005439\|Ga0070711_100165036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1682	Open in IMG/M
3300005445\|Ga0070708_100910652	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005445\|Ga0070708_101570628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	613	Open in IMG/M
3300005467\|Ga0070706_101506619	Not Available	615	Open in IMG/M
3300005471\|Ga0070698_101239160	Not Available	695	Open in IMG/M
3300005518\|Ga0070699_102058444	Not Available	522	Open in IMG/M
3300005530\|Ga0070679_101791929	Not Available	562	Open in IMG/M
3300005535\|Ga0070684_101067842	Not Available	758	Open in IMG/M
3300005547\|Ga0070693_100222455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1237	Open in IMG/M
3300005578\|Ga0068854_101601432	Not Available	593	Open in IMG/M
3300005614\|Ga0068856_101037891	Not Available	838	Open in IMG/M
3300005618\|Ga0068864_101687207	Not Available	638	Open in IMG/M
3300005921\|Ga0070766_10397855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	902	Open in IMG/M
3300005952\|Ga0080026_10035892	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005994\|Ga0066789_10299815	Not Available	672	Open in IMG/M
3300006028\|Ga0070717_10323970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1373	Open in IMG/M
3300006028\|Ga0070717_10381630	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300006028\|Ga0070717_10891771	Not Available	809	Open in IMG/M
3300006028\|Ga0070717_11489273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300006173\|Ga0070716_100668529	Not Available	790	Open in IMG/M
3300006173\|Ga0070716_101672563	Not Available	524	Open in IMG/M
3300006174\|Ga0075014_100416177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44268	736	Open in IMG/M
3300006175\|Ga0070712_101020168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300006176\|Ga0070765_100201600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1805	Open in IMG/M
3300006755\|Ga0079222_11182900	Not Available	682	Open in IMG/M
3300006797\|Ga0066659_10267709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1288	Open in IMG/M
3300006800\|Ga0066660_11573821	Not Available	520	Open in IMG/M
3300006804\|Ga0079221_10061436	Not Available	1722	Open in IMG/M
3300006804\|Ga0079221_10171708	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300006804\|Ga0079221_10320103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	920	Open in IMG/M
3300006804\|Ga0079221_10329666	Not Available	911	Open in IMG/M
3300006804\|Ga0079221_11128417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	602	Open in IMG/M
3300006852\|Ga0075433_11346902	Not Available	618	Open in IMG/M
3300006854\|Ga0075425_100026135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6445	Open in IMG/M
3300006854\|Ga0075425_101953706	Not Available	657	Open in IMG/M
3300006854\|Ga0075425_102956129	Not Available	520	Open in IMG/M
3300006881\|Ga0068865_100924169	Not Available	760	Open in IMG/M
3300006904\|Ga0075424_100010490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9178	Open in IMG/M
3300006904\|Ga0075424_100481246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1325	Open in IMG/M
3300007076\|Ga0075435_100301869	Not Available	1369	Open in IMG/M
3300007076\|Ga0075435_101128488	Not Available	685	Open in IMG/M
3300007255\|Ga0099791_10012402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3589	Open in IMG/M
3300009090\|Ga0099827_11289715	Not Available	635	Open in IMG/M
3300009162\|Ga0075423_10146627	Not Available	2477	Open in IMG/M
3300009162\|Ga0075423_10159259	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300009553\|Ga0105249_10493850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora cheerisanensis → Kitasatospora cheerisanensis KCTC 2395	1268	Open in IMG/M
3300010333\|Ga0134080_10683465	Not Available	507	Open in IMG/M
3300010360\|Ga0126372_12372526	Not Available	581	Open in IMG/M
3300010373\|Ga0134128_11114686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	871	Open in IMG/M
3300010375\|Ga0105239_11891142	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	692	Open in IMG/M
3300010880\|Ga0126350_11412744	Not Available	980	Open in IMG/M
3300010880\|Ga0126350_12202211	Not Available	1275	Open in IMG/M
3300011270\|Ga0137391_11288570	Not Available	578	Open in IMG/M
3300011271\|Ga0137393_10009901	All Organisms → cellular organisms → Bacteria	6536	Open in IMG/M
3300012189\|Ga0137388_11932084	Not Available	520	Open in IMG/M
3300012200\|Ga0137382_10269619	Not Available	1183	Open in IMG/M
3300012209\|Ga0137379_10298016	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300012209\|Ga0137379_11814828	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012210\|Ga0137378_11747578	Not Available	527	Open in IMG/M
3300012350\|Ga0137372_10791757	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012351\|Ga0137386_11036300	Not Available	582	Open in IMG/M
3300012354\|Ga0137366_10185834	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300012357\|Ga0137384_10290340	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300012357\|Ga0137384_11257802	Not Available	586	Open in IMG/M
3300012363\|Ga0137390_10645192	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1024	Open in IMG/M
3300012515\|Ga0157338_1084573	Not Available	519	Open in IMG/M
3300012955\|Ga0164298_11184343	Not Available	578	Open in IMG/M
3300012976\|Ga0134076_10477679	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012984\|Ga0164309_10817104	Not Available	752	Open in IMG/M
3300014325\|Ga0163163_10402701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	1427	Open in IMG/M
3300015371\|Ga0132258_12006175	Not Available	1456	Open in IMG/M
3300017946\|Ga0187879_10106617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1604	Open in IMG/M
3300017948\|Ga0187847_10275325	Not Available	919	Open in IMG/M
3300018043\|Ga0187887_10565358	Not Available	671	Open in IMG/M
3300019888\|Ga0193751_1093413	Not Available	1173	Open in IMG/M
3300019890\|Ga0193728_1121640	Not Available	1182	Open in IMG/M
3300020002\|Ga0193730_1130481	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300020579\|Ga0210407_10737117	Not Available	763	Open in IMG/M
3300020582\|Ga0210395_10256146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1315	Open in IMG/M
3300020582\|Ga0210395_10847269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	680	Open in IMG/M
3300020583\|Ga0210401_11203414	Not Available	616	Open in IMG/M
3300021170\|Ga0210400_10504502	Not Available	999	Open in IMG/M
3300021401\|Ga0210393_11561323	Not Available	524	Open in IMG/M
3300021404\|Ga0210389_10337183	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1183	Open in IMG/M
3300021406\|Ga0210386_10261558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1477	Open in IMG/M
3300021406\|Ga0210386_11175627	Not Available	649	Open in IMG/M
3300021406\|Ga0210386_11533943	Not Available	554	Open in IMG/M
3300021432\|Ga0210384_11574422	Not Available	563	Open in IMG/M
3300021474\|Ga0210390_10856900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	749	Open in IMG/M
3300021477\|Ga0210398_11043054	Not Available	651	Open in IMG/M
3300021478\|Ga0210402_11477237	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300021559\|Ga0210409_10639715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	933	Open in IMG/M
3300025885\|Ga0207653_10404916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300025898\|Ga0207692_10220911	Not Available	1123	Open in IMG/M
3300025905\|Ga0207685_10100497	Not Available	1236	Open in IMG/M
3300025910\|Ga0207684_10256777	Not Available	1508	Open in IMG/M
3300025910\|Ga0207684_10263244	Not Available	1488	Open in IMG/M
3300025910\|Ga0207684_11684899	Not Available	511	Open in IMG/M
3300025915\|Ga0207693_10133365	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300025922\|Ga0207646_10422392	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1203	Open in IMG/M
3300025922\|Ga0207646_10842777	Not Available	815	Open in IMG/M
3300025922\|Ga0207646_11329308	Not Available	627	Open in IMG/M
3300025928\|Ga0207700_10541978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300025928\|Ga0207700_11064790	Not Available	723	Open in IMG/M
3300025929\|Ga0207664_10127192	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300025934\|Ga0207686_11154506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	633	Open in IMG/M
3300026035\|Ga0207703_10152226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2018	Open in IMG/M
3300026329\|Ga0209375_1233453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300026551\|Ga0209648_10074001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2860	Open in IMG/M
3300026557\|Ga0179587_10124185	Not Available	1587	Open in IMG/M
3300027029\|Ga0208731_1015245	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300027096\|Ga0208099_1047197	Not Available	616	Open in IMG/M
3300027765\|Ga0209073_10408803	Not Available	558	Open in IMG/M
3300027821\|Ga0209811_10258986	Not Available	665	Open in IMG/M
3300027908\|Ga0209006_10695633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	833	Open in IMG/M
3300028742\|Ga0302220_10289204	Not Available	597	Open in IMG/M
3300028747\|Ga0302219_10340740	Not Available	585	Open in IMG/M
3300028781\|Ga0302223_10102471	Not Available	948	Open in IMG/M
3300028781\|Ga0302223_10271009	Not Available	561	Open in IMG/M
3300028906\|Ga0308309_11813683	Not Available	516	Open in IMG/M
3300029882\|Ga0311368_10255667	Not Available	1351	Open in IMG/M
3300029910\|Ga0311369_10321266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1373	Open in IMG/M
3300029944\|Ga0311352_10589110	Not Available	889	Open in IMG/M
3300029999\|Ga0311339_10551761	Not Available	1159	Open in IMG/M
3300030399\|Ga0311353_10044373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	4564	Open in IMG/M
3300030503\|Ga0311370_10905836	Not Available	998	Open in IMG/M
3300030509\|Ga0302183_10143882	Not Available	937	Open in IMG/M
3300030524\|Ga0311357_11465897	Not Available	579	Open in IMG/M
3300030580\|Ga0311355_11242336	Not Available	655	Open in IMG/M
3300030739\|Ga0302311_10012180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8411	Open in IMG/M
3300030739\|Ga0302311_10166764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1701	Open in IMG/M
3300031234\|Ga0302325_10434000	Not Available	2025	Open in IMG/M
3300031718\|Ga0307474_11150694	Not Available	614	Open in IMG/M
3300031962\|Ga0307479_11148872	Not Available	742	Open in IMG/M
3300031962\|Ga0307479_11980391	Not Available	532	Open in IMG/M
3300032160\|Ga0311301_10229803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3105	Open in IMG/M
3300032180\|Ga0307471_102101982	Not Available	710	Open in IMG/M
3300032205\|Ga0307472_101224862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300032829\|Ga0335070_10719279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.97%
Host-Associated	Host-Associated	15.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	15.03%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.90%
Peat	Environmental → Terrestrial → Peat	10.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.23%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Sediment	Environmental → Aquatic → Sediment	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.18%
Loam	Environmental → Terrestrial → Soil → Loam	28.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	20.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.31%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1018593212	3300004479	Soil	MIDGNPRTQRPSEGPGIVERPVLPTGAMRRSGRLAVLPLRHAARTAAAAS
Ga0066688_102695911	3300005178	Soil	MTDGYQRQQRPLRAVGGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLSRAA
Ga0068868_1022069852	3300005338	Miscanthus Rhizosphere	MTDGHQRQQRPLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVASRT
Ga0070661_1002268701	3300005344	Corn Rhizosphere	MTEGHLRPSGAVGQRERPVLPAGGLRRTGRLAALPLRHAARTAAAATRLSRVAADQVAARTAEQLFGT
Ga0070692_101056031	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQRPLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAA
Ga0070709_105176921	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRHQVQQRPLPAAVESRERPVLPTGALRRTSRLALLPLRHAARTAAAASRLSQAASDQIAARTA
Ga0070709_111974022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGVQRAQRPPEEARTWERPVLPTGALRRGGRLAVLPLRHAARTAA
Ga0070714_1013785421	3300005435	Agricultural Soil	MTDAQPSPQRAAGSAPGGPERPVLATGALRRSGRLAVLPIRHAARTAAAATRLSRTATDQVAA
Ga0070714_1014960451	3300005435	Agricultural Soil	MTDGYQRQQRPLRAAVEGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRL
Ga0070714_1020636831	3300005435	Agricultural Soil	MIDGNPRAQPPSEAGGTWERPVLPTGALRRSGRLAVLPLRHAARTAA
Ga0070713_1005856621	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGHPRAQWPSEPGAIWERPVLPTGALRRGGRLAVLPLRHAARTAAAAS
Ga0070713_1024576981	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQRPLRAAVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVASR
Ga0070711_1001650361	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRHQVQQRPLPAAVESRERPVLPTGALRRTSRLALLPLRHAARTAAAASRLSQAASD
Ga0070708_1009106521	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTEITDGRPRPQWPWTAAGNGERPVLPIGALRRTSRLAGLPLRHAARTAAAASRLPR
Ga0070708_1015706281	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGNQRQQRPLRAALGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVASRTAEQVFATLGEL
Ga0070706_1015066191	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGVQRAQRPPEEARTWERPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAAT
Ga0070698_1012391602	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGNPRAQRPSEGPGMWERPVLPTGTLRRGGRLAVLPLRHAARTAAAASRLSRAA
Ga0070699_1020584441	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESRERPVLLTGALRRTSRLALLPLRHAARTAAAASRLSQAATDQIAARTAEQVFATMGEL
Ga0070679_1017919291	3300005530	Corn Rhizosphere	MMSDGNPRAQRPSAAEGIWEPPVLPTGALRRGGRLAVLPLRHAARTAAAARRLSRAATD
Ga0070684_1010678421	3300005535	Corn Rhizosphere	MSDGNPRAQRPSAAEGIWEPPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVF
Ga0070693_1002224551	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQRSLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAAT
Ga0068854_1016014322	3300005578	Corn Rhizosphere	MMSDGNPRAQRPSAAEGIWEPPVLPTGALRRGGRLAVLPLRHAARTAAA
Ga0068856_1010378911	3300005614	Corn Rhizosphere	MTDIHQRLQRPLEAATETKERSVLPTGGLRRINRLAMLPLRHAGSTAAAASRLSRAAGDQVAARTAEQLFATL
Ga0068864_1016872072	3300005618	Switchgrass Rhizosphere	MTNVYQRPQRPLEAVTERKERPALRTGALGRAGRLAMLPLRHAGRTAAAASRLSRVAGDQVAARTAEQLFAT
Ga0070766_103978551	3300005921	Soil	MTDGHQVQQRPLRAVAESRERPVLPTGALRRTSRLAMLPLGHAARTAAAASRLSRAATDQVAARTAE
Ga0080026_100358921	3300005952	Permafrost Soil	MTDGYPRSQRPLEAATERKERPVLPTGALRRTGRLAMLPLRHAGRTAAAASRLSRAAGDQVAART
Ga0066789_102998152	3300005994	Soil	MTDGYRRQQESVAVGARERPVLPTGVLGRTGRLALLPLRHAGRTAAAASRLSRAGADQVAARTA
Ga0070717_103239701	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRHQVQQRPLPAAVEGRERPVLPTGALRRTSRLALLPLRHAARTAAAASRLSQAASDQIAARTAEQVFATM
Ga0070717_103816301	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGHPRAQWPSEPGTIWERPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSR
Ga0070717_108917712	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQRPLQAAGVSQERPVVPTGALRRTSRLAVLPLRHAVRTAAAASRLSRAATDQVASRTAEQVFATLGE
Ga0070717_114892731	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTDRHQVQQRLLPAAVESRERPVLPTGALRRTSRQAMLPLRHAARSAAASRMSRAAADQV
Ga0070716_1006685292	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESQERPVLLTGALRRTSRLALLPLRHAARTAAAASRLSQ
Ga0070716_1016725632	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQQPPPRAAVGSQERRVVPTGTLWRTSRLAMLPLRHAARTAAAASRLSRTAPD
Ga0075014_1004161771	3300006174	Watersheds	MTDGHQGQQRPLGAVGSRERPVVPTGALGRTSRLAMLPLRHAARTAAAASRLS
Ga0070712_1010201681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQGQQRPLRAAEVSRERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVAS
Ga0070765_1002016001	3300006176	Soil	MTDGHRRQQRPLPAVGNRERPVLPTGALGRTGRLAMLPLRHAARTAAAASRLSRAATDQVAART
Ga0079222_111829003	3300006755	Agricultural Soil	MTDGHQRQQRPLQAAVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAAT
Ga0066659_102677091	3300006797	Soil	MTDGYQRQQRPLRAVGGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLSRAATDQVASRTAEHVF
Ga0066660_115738211	3300006800	Soil	MTDGYQRQQRPLRAVGGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLSRAATDQVASRTAEH
Ga0079221_100614363	3300006804	Agricultural Soil	MIDGYPRAERPSEREGVWERPVLPAGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTA
Ga0079221_101717081	3300006804	Agricultural Soil	MTDGHQRQQRPLRAPVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLS
Ga0079221_103201031	3300006804	Agricultural Soil	MTDGHQSPQWPQEAGGCWERPVLPTGALRRSGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVFTT
Ga0079221_103296661	3300006804	Agricultural Soil	MIDGNPRAQRPSEGPGIWEPPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTA
Ga0079221_111284171	3300006804	Agricultural Soil	MTDGHQHQQRVPEAAVGSRERPVLPTGGLRRTGRLAMLPLRHAGRTAAAASRLSRAAGGQVSARTAEQLFA
Ga0075433_113469021	3300006852	Populus Rhizosphere	MTDGHQRQQRPLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLS
Ga0075425_1000261351	3300006854	Populus Rhizosphere	MIDGNPRAQRPSEGPGIWERPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVFT
Ga0075425_1019537061	3300006854	Populus Rhizosphere	MTDGYPSPQWPREEAGSLERPVLPTGALRRSGRLAVLPLRHAARTAAAASRLSRAA
Ga0075425_1029561291	3300006854	Populus Rhizosphere	MIDGYPRAERPSEREGVWERPVLPTGAMRRSGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVFT
Ga0068865_1009241692	3300006881	Miscanthus Rhizosphere	MTEGHLRPSGAVGQRERPVLPAGGLRRTGRLAALPLRHAARTAAAATRLSRVAADQVAARTAEQLF
Ga0075424_10001049012	3300006904	Populus Rhizosphere	MTDGHPSPQWPQEAEEVWERPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQ
Ga0075424_1004812463	3300006904	Populus Rhizosphere	MIDGNPRAQRPSEGPGIWEPPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQ
Ga0075435_1003018691	3300007076	Populus Rhizosphere	MIDGNPRAQRPSEGPGIWEPPVLPTGAMRRGGRLAVLPLRHAARTAAAASR
Ga0075435_1011284883	3300007076	Populus Rhizosphere	MIDGNPRAQRPSEGPGIWEPPVLPTGTLRRSGRLAVLPLRHAARTAAAASRLSRAATDQ
Ga0099791_100124021	3300007255	Vadose Zone Soil	MAKMIDGVQRAQRPSEAARIWERPVLPTGALRRGGRLAALPLRHAARTAAAAGRLSRATTDEVAART
Ga0099827_112897151	3300009090	Vadose Zone Soil	MTDGHQRQQRPLRAAGVSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVASRTAEQV
Ga0075423_101466274	3300009162	Populus Rhizosphere	MRTAKMIDGYPRAERPSEREGVWERPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVFTTLG
Ga0075423_101592593	3300009162	Populus Rhizosphere	MSEMTDGHPSPQWPQEAEEVVERPVLPTGAMRRGGRLAVLPLRHAARTAAAASRLSRAATDQV
Ga0105249_104938502	3300009553	Switchgrass Rhizosphere	MTDGHQHQQRPLRAAAGSQERPVVPTGAFRRTSRLAVLPLRHAARTAAAASRLSRAATDQVA
Ga0134080_106834651	3300010333	Grasslands Soil	MTDGHQRQQRPLRAAVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAVRAAC
Ga0126372_123725261	3300010360	Tropical Forest Soil	MAKMIDANPRAQRPSEPGGTWERPVLPTGALRRSGRLAVLPLRHAARTAAAASRLSRAATDQVAA
Ga0134128_111146861	3300010373	Terrestrial Soil	MAMMSDGNPRAQRPSEGPGMWERPVLPTGTLRRGGRLAVLPLRHAARTAAAASRL
Ga0105239_118911422	3300010375	Corn Rhizosphere	MTDGHQRQQRPLRAAAGSQERPVVPTGAFRRTSRLAVLPLRHAARTAAAASRLSRAATDQVA
Ga0126350_114127443	3300010880	Boreal Forest Soil	MTDRHQVQQRPLRAAAASRERPVLPTGALGRGGRLAMLPLRHAARTAAAASRLSRAATD
Ga0126350_122022112	3300010880	Boreal Forest Soil	MTDGHQGQQRPQPAAVESRERPVLPTGALQRTSRLAMLPLRHAAHTAAVASRLSRAATDQVAVRTAEQLFTTLGEL
Ga0137391_112885701	3300011270	Vadose Zone Soil	MTDGHQVQQRPLPAAVESRERPVLPTSALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAARTAEQLF
Ga0137393_100099016	3300011271	Vadose Zone Soil	MTDGHQRQQRPLQAAVGSPERPVLPAGALRRTSRLAMLPLRHAVRTAAAASRLSRAATDQVAARTAEQLFTTLGEL
Ga0137388_119320841	3300012189	Vadose Zone Soil	MAKMIDGVQRAQRPSEAARIRERPVLPTGALRRGGRLAALPLRHAARTA
Ga0137382_102696193	3300012200	Vadose Zone Soil	MSDGHQRQQRPQPAAAGSQERRVVPAGALWRTGRLAMLPLRHAARTAAAASRLS
Ga0137379_102980163	3300012209	Vadose Zone Soil	MTDTHPRPQRPWGAVARRERPVLPVGALRRTRRLAALPLRHAARTAAAASRLSRA
Ga0137379_118148281	3300012209	Vadose Zone Soil	MTDGHPHPQWPWGAVGSRERRVLPTGALRRGSRLAVLPLRHAAHTAAAA
Ga0137378_117475782	3300012210	Vadose Zone Soil	MTDGHQRQLRPLQATVGSQERQVVPTSALWRTSRLAMLPLRHAARTAAAASRLSRAATDQ
Ga0137372_107917572	3300012350	Vadose Zone Soil	MTDTHPRPQRPWGAVARRERPVLPVGALRRTRRLAALPLRHAARTAAAASRLSRAA
Ga0137386_110363001	3300012351	Vadose Zone Soil	MTDGHQVQQRPLPAAVESRERPVLPTSALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAARTAEQ
Ga0137366_101858341	3300012354	Vadose Zone Soil	MVDMTDGRPRPRGAAGDQERPVLPTGALRRGSRLAVLPLRHAAHTAAAATRLSRAATDQVAARTAEQ
Ga0137384_102903403	3300012357	Vadose Zone Soil	MTDGHPQQRPLEAATERKERPVLPTGALRRTGRLAMLPLRHAGRTAAAASRLSRAA
Ga0137384_112578021	3300012357	Vadose Zone Soil	MTDGDRRQERPLGAAAGSQERPVLLTGAFRRTSRLAMLPVRHAARTAAAAGRLSRAA
Ga0137390_106451922	3300012363	Vadose Zone Soil	MAEMTDGHPRPQQPSGGAAGRKERPVLPTGALWRGSRLAVLPLRHAARTAAAASRLSRAATDQV
Ga0157338_10845731	3300012515	Arabidopsis Rhizosphere	MTDGHQRQQRPLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAAGRL
Ga0164298_111843431	3300012955	Soil	MIDGHQRQQRPLPAAADSRERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATDQVASRTAEQ
Ga0134076_104776791	3300012976	Grasslands Soil	MAEMTDGHPRPQRPLEAATQRKERPVLPTGALRRTSRLAVLPLRHAARTAATASRLSRAA
Ga0164309_108171042	3300012984	Soil	MTDGHQRQQRPLRAAVGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATD
Ga0163163_104027011	3300014325	Switchgrass Rhizosphere	MAMMSDGNPRAQRPSAAEGIWEPPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAAT
Ga0132258_120061752	3300015371	Arabidopsis Rhizosphere	MTDGHQRQQRPLRAAVGSQERPVVPTGALRRTSRLAVLPLRHAVRTAAAACRLSRAATDQVASRTAEQVFATL
Ga0187879_101066171	3300017946	Peatland	MTDGHARPQGPWGIAVGTRERPVLPTGALRRTSRLAMLPLRRAGRTAAAASRLAMLPLRRAG
Ga0187847_102753251	3300017948	Peatland	MTDGYRRQQESVAVGARERPVLPTGVLGRTGRLAMLPLRHAARTAAAASRLSRAGADQVAARTAEQVFA
Ga0187887_105653581	3300018043	Peatland	MTDGHQGQQRPLPAAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAASRLSRAGADQIAARTAEQVFDTLGEL
Ga0193751_10934131	3300019888	Soil	MTDGHPRAQRPLEAATERKERPVLPTGALRRTGRLAMLPLRHAGRTAAAASRLSRAAGDQ
Ga0193728_11216402	3300019890	Soil	MTDGHQHQQRLLRAPAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLSRAATD
Ga0193730_11304811	3300020002	Soil	VTDEHPRPQRPLEAATERKERPVLPTGALRRTGRLAMLPLRHAGRTAVAAS
Ga0210407_107371172	3300020579	Soil	MTDGHQVQQRPLPAAVDSRERPVLPTGALRRTSRLALLPLRHAARTTAAASRL
Ga0210395_102561462	3300020582	Soil	MTDGHQVEQRPLRAAAGSRERPVLPTGGLGRTGRLALLPLRHAARTAAVASRLSRAAAD
Ga0210395_108472692	3300020582	Soil	MTDGHQVQQPPLPAAVESRERPVLPTGPLRRTGRLAMLPLQHAARTAAVASRLSRAATDQVAARTAEQVFATLGELKG
Ga0210401_112034142	3300020583	Soil	MTDGHQVQQRPLRAAESRERSVLPTGALRRTGRLAMLPLGHAARTAAVASRLSRVASDQVAARTAERL
Ga0210400_105045022	3300021170	Soil	MTDGHQVQQRPLRAVAESRERPVLPTGALRRTSRLAMLPLGHAARTAAVASRLSRAATDQVAARTAEQLFATLG
Ga0210393_115613232	3300021401	Soil	MTEGHPRQQWPLRAAADSQERPVVPTGTLRRTSRLAILPLRHAARSAAAASRLSRAAG
Ga0210389_103371831	3300021404	Soil	MNDGDQRQQRPLRAAVGSQERPVVPTGALRRTTRLAGLPLRHAARTAAAATRLSRAATDQVASRTAEQVFATLGEL
Ga0210386_102615583	3300021406	Soil	MTDGHQVQQRPLPAAMESRERPVLPTGALRRTSRLALLPLRHAARTAAAASWLS
Ga0210386_111756272	3300021406	Soil	MTDGHQVQQRPLRAVAESRERPVLPTGALRRTSRLAMVPLGHAARTAAVASRLSRAATDQVAARTAERL
Ga0210386_115339432	3300021406	Soil	MTDGHQVQQRPLPAAVESRERPVLPTGPLRRTGRLAMLPVRHAARTAAVASRLSRAATDQVAARTAEQVFATLGEL
Ga0210384_115744221	3300021432	Soil	MTDGHQVQQRPLPAAVESRERPVLPTGALRRTSRLALLPLRHAARTAAAASR
Ga0210390_108569001	3300021474	Soil	MTDGHQVQQRPLPAAVESRERPVLPTGPLRRTGRLAMLPVRHAARTAAVASRLSRAATDQVAARTAEQVFATLGELKG
Ga0210398_110430541	3300021477	Soil	MTDGHQVQQRPLRAGAGSRERPVLPTGALGRTSRLAMLPLRHAARTAAAASRLSRAATDQ
Ga0210402_114772372	3300021478	Soil	MTDGHTRWQQPEAVGTRERPVLPTGALRRTGRLAVLPLRHAAHSAAAASRLSRTATDQVAARTAE
Ga0210409_106397152	3300021559	Soil	MIDGHQRQQRPLPAAVDGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLS
Ga0207653_104049162	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESRERPVVPTGALWRTGRLAMLPLRHAARTAAAAS
Ga0207692_102209112	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTDIHQRLQRPLEAATETKERSVLPTGGLRRINRLAMLPLRHAGSTAAAASRLSRAAGDQVAART
Ga0207685_101004972	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQRQQRPLRAAAESQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAATD
Ga0207684_102567773	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESRERPVLPTGALRRTSRLAMLPLRHAGRTAAVASRLSRAASDQIAGRTAGQ
Ga0207684_102632441	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHPRPQRPLEAATERKERPVLPTGALQRTGRLAMLPLRHAGRTAAAASRLSRVAGDQ
Ga0207684_116848991	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGYERQQRPLRAVVGSRERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRAAADQVAA
Ga0207693_101333651	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGHPRAQWPSEPGAIWERPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAATDEVAARTAEQVFATLG
Ga0207693_112184573	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAQPSPQRAAGSAPGGPERPVLATGALRRSGRLAVLPIRHAARTAAAATRLSRTATD
Ga0207646_104223921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESRERPVLLTGALRRTSRLALLPLRHAARTAAAASRLSQAATDQIAA
Ga0207646_108427771	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGNPRAQRPSEAGGTWERPVLPTGALRRSGRLAVLPLRHAARTAAAASRLSRAATDQV
Ga0207646_113293082	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHQVQQRPLPAAVESRERPVLPTGALRRTSRLAMLPLRHAGRTAAVASRLSRAASDQVAARTAGQLFTTLGE
Ga0207700_105419783	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDGHPSSQWPREAAGSLERPVLPTGALRRTSMLAVLPLRHAARTAAAA
Ga0207700_110647901	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIDGHPRAQWPSEPGAIWERPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAATDEVAARTAEQVFATL
Ga0207664_101271923	3300025929	Agricultural Soil	MTNVHQRPQRPLEAVTERKERPALRTGALGRAGRLAMLPLRHAGRTAAAASRLSRAAGDQVAARTAEQLFA
Ga0207686_111545061	3300025934	Miscanthus Rhizosphere	MTEGHTRRQQPEAVGTRERPVLPTGALRRTGRLAVLPLRHAAHSAAAASRLSRTATDQVAARTAEQLFATFG
Ga0207703_101522264	3300026035	Switchgrass Rhizosphere	MMSDGNPRAQRPSAAEGIWEPPVLPTGALRRGGRLAVLPLRHAARTAAAASRL
Ga0209375_12334532	3300026329	Soil	MTDGYQRQQRPLRAVGGQERPVVPTGALRRTSRLAVLPLRHAARTAAAATRLSRAATDQVAS
Ga0209648_100740011	3300026551	Grasslands Soil	MTDGHQVQQRPLPAAVESRERPVLPTSALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAARTAEQLFTTLG
Ga0179587_101241852	3300026557	Vadose Zone Soil	MTDGHQRQQRPLRAAGVSQERPVVPTGALRRTSRLAVLPLRHAVRTAAAASRLSRAATDQVASRT
Ga0208731_10152452	3300027029	Forest Soil	MTDGHQVQQRPLRAVAESRERPVLPTGALRRTSRLAMLPLGHAARTAAVASRLSRAATDQVAARTAEHL
Ga0208099_10471972	3300027096	Forest Soil	MTDGHQVQQRPLRAVAESRERPVLPTGALRRTSRLAMLPLGHAARTAAVASRLSRAATDQVAARTAEHLFATLGELK
Ga0209073_104088031	3300027765	Agricultural Soil	MTDGHQRQQRPLRAAAGSQERPVVPTGALRRTSRLAVLPLRHAARTAAAASRLSRA
Ga0209811_102589861	3300027821	Surface Soil	MTDGHPSSQWPREAAGSLERPVLPTGALRRTSMLAVLPLRHAARTAAAASRLSRAATDEVAARTAEQVFATL
Ga0209006_106956332	3300027908	Forest Soil	MTDGHQGQQRPLQAAVESQERPVLPTGALRRTSRLAMLPLRHAARTAAVASRLSRAGADQ
Ga0302220_102892042	3300028742	Palsa	MTDIHQGQQPPLPAAAGSRERPVLPTGALGRTGRLAMLPLRHAARSAAAASRLSRAG
Ga0302219_103407401	3300028747	Palsa	MTDIHQGQERPLPAAAGSRERPVLPTGALERTGRLALLPLRHAARTAASRLSRAGADQIAARTAEQ
Ga0302223_101024711	3300028781	Palsa	MTDGHQGQQRPLPAAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAASRLSRAG
Ga0302223_102710092	3300028781	Palsa	MTDIHQGQERPLPAAAGSRERPVLPTGALERTGRLALLPLRHAARTAASRLSR
Ga0308309_118136831	3300028906	Soil	MTHGYTRQQQSETAGTRERPVLPTGPLRRTGRLAVLPMRHAARSAAAASRLSRAATDQIAARTAEQLFAT
Ga0311368_102556671	3300029882	Palsa	MTDIHQGQERPLPAAAGSRERPVLPTGALERTGRLALLPLRHAARTAASRLSRAGADQIAARTAEQVFATLGELK
Ga0311369_103212663	3300029910	Palsa	MTDRRQVQQRPLPALVESRERPVLPAGALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAARTAEQLF
Ga0311352_105891102	3300029944	Palsa	MTDRRQVQQRPLPALVESRERPVLPAGALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAARTAEQVFTT
Ga0311339_105517611	3300029999	Palsa	MTDGHQGQQRALPVAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAASRLSRAGADQIAAR
Ga0311353_100443731	3300030399	Palsa	MTDRRQVQQRPLPALVESRERPVLPAGALRRTSRLAMLPLRHAARTAAVASRLSRAATDQVAA
Ga0311370_109058362	3300030503	Palsa	MTDIHQGQQPPLPAAAGSRERPVLPTGALGRTSRLAMLPLRHAARTAAAASRLSRAGADQ
Ga0302183_101438821	3300030509	Palsa	MTDGHQGQQRPLPVAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAVSRLSRVG
Ga0311357_114658971	3300030524	Palsa	MTEGHQHEQRALPAAVDSRERPVVPTSALGRTGRLALLPLRHAARTAAAAS
Ga0311355_112423362	3300030580	Palsa	MTDRRQVQQRPLPALVDSRERPVLPAGALRRTSRLAMLPLRHAARTAAVASRL
Ga0302311_100121801	3300030739	Palsa	MTDGHQGQQRPLPAAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAVSRLSRVGADQIAARTAEQVFATL
Ga0302311_101667643	3300030739	Palsa	MTDRRQVQQRPLPALVESRERPVLPAGALRRTSRLAMLPLRHAARTAAVASRLSRA
Ga0302325_104340004	3300031234	Palsa	MTDGHQGQQRALPVAAGSRERPVLPTGALGRTGRLAVLPLRHAARTAASRLSRAGADQ
Ga0307474_111506941	3300031718	Hardwood Forest Soil	MVEMTDGHPRPQGPWGTAGNRERPVLPTGVLRRGSRLAVLPLRHVARTAAAATR
Ga0307479_111488722	3300031962	Hardwood Forest Soil	MTNGHQVQQRPLPAAVESRERPVLPTGALRRTSRLALLPLRHAARTAAAAS
Ga0307479_119803911	3300031962	Hardwood Forest Soil	MIDTTPHARRTSEAGEVLERPVLPTGALRRGGRLAVLPLRHAARTAAAASRLSRAATDQVAARTAEQVFATLGE
Ga0311301_102298031	3300032160	Peatlands Soil	MTDGHQGQQRPLGAVGPRERPVVPTSALGRTSRLAMLPLRHAARTAAAASRLSRAATDQVAARTAEQLFTTLG
Ga0307471_1007346031	3300032180	Hardwood Forest Soil	MTDAQPSPQRAAGSAPGGPERPVLATGALRRSGRLAVLPIRHAARTAAAATRLS
Ga0307471_1021019822	3300032180	Hardwood Forest Soil	MTNVYQRPQRPLEAATERKERPVLPGGALRRAGRLAALPLRHAGRTAAAASRLSRAA
Ga0307472_1012248621	3300032205	Hardwood Forest Soil	MTDGHQRQQRPLRAAGVSQERPVVPTGGLRRTSRLAVLPLRHAARTAAAATRLTRA
Ga0335070_107192792	3300032829	Soil	MTQGHLRPSRAVARPERPVLPAGGLRRTGRLAALPLRHAARTAAAATRLSRVAADQVAARTAEQRPCSMSLVRVVLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045308

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences