Metagenome / Metatranscriptome Family F045325

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045325
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	41 residues
Representative Sequence	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVK
Number of Associated Samples	133
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.95 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	79.74 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.699 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (27.451 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.64% β-sheet: 0.00% Coil/Unstructured: 75.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF01208	URO-D	21.57
PF00762	Ferrochelatase	2.61
PF01593	Amino_oxidase	1.96
PF07992	Pyr_redox_2	1.96
PF05192	MutS_III	1.96
PF07676	PD40	1.31
PF10282	Lactonase	1.31
PF12840	HTH_20	1.31
PF04095	NAPRTase	1.31
PF12867	DinB_2	1.31
PF08240	ADH_N	0.65
PF13544	Obsolete Pfam Family	0.65
PF04014	MazE_antitoxin	0.65
PF01797	Y1_Tnp	0.65
PF01370	Epimerase	0.65
PF06262	Zincin_1	0.65
PF03786	UxuA	0.65
PF01979	Amidohydro_1	0.65
PF08281	Sigma70_r4_2	0.65
PF10754	DUF2569	0.65
PF14307	Glyco_tran_WbsX	0.65
PF01641	SelR	0.65
PF00440	TetR_N	0.65
PF02652	Lactate_perm	0.65
PF02371	Transposase_20	0.65
PF02954	HTH_8	0.65
PF01740	STAS	0.65
PF08308	PEGA	0.65
PF00144	Beta-lactamase	0.65
PF09413	DUF2007	0.65
PF00248	Aldo_ket_red	0.65
PF13414	TPR_11	0.65
PF13883	Pyrid_oxidase_2	0.65
PF00004	AAA	0.65
PF03631	Virul_fac_BrkB	0.65
PF13950	Obsolete Pfam Family	0.65
PF13673	Acetyltransf_10	0.65
PF09723	Zn-ribbon_8	0.65
PF03704	BTAD	0.65
PF10012	DUF2255	0.65
PF00834	Ribul_P_3_epim	0.65
PF02518	HATPase_c	0.65
PF00069	Pkinase	0.65
PF08241	Methyltransf_11	0.65
PF00753	Lactamase_B	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	21.57
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	2.61
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.61
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	1.96
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	1.31
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	0.65
COG1620	L-lactate permease	Energy production and conversion [C]	0.65
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.65
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.65
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.65
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.65
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.65
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.70 %
Unclassified	root	N/A	18.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.70 %
Unclassified	root	N/A	18.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.70 %
Unclassified	root	N/A	18.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.63 %
Unclassified	root	N/A	18.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.22 %
Unclassified	root	N/A	18.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.50 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.31 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.50 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.31 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.92 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.31 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.27 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.31 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.27 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.31 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.22 %
Unclassified	root	N/A	18.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.27 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.31 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102802099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300001593\|JGI12635J15846_10618711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	629	Open in IMG/M
3300001867\|JGI12627J18819_10429536	Not Available	539	Open in IMG/M
3300002908\|JGI25382J43887_10219052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300004633\|Ga0066395_10559126	Not Available	666	Open in IMG/M
3300005332\|Ga0066388_108011472	Not Available	528	Open in IMG/M
3300005436\|Ga0070713_101794706	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300005451\|Ga0066681_10513069	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300005534\|Ga0070735_10135163	All Organisms → cellular organisms → Bacteria → Acidobacteria	1534	Open in IMG/M
3300005548\|Ga0070665_102296159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005578\|Ga0068854_100009634	All Organisms → cellular organisms → Bacteria	6238	Open in IMG/M
3300005591\|Ga0070761_10767307	Not Available	606	Open in IMG/M
3300005843\|Ga0068860_102711011	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006041\|Ga0075023_100140801	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300006050\|Ga0075028_100751034	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300006059\|Ga0075017_100884300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300006173\|Ga0070716_100032703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2840	Open in IMG/M
3300006852\|Ga0075433_10024731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5072	Open in IMG/M
3300006914\|Ga0075436_100583785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300007982\|Ga0102924_1148012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300009012\|Ga0066710_100327047	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300009098\|Ga0105245_12491704	Not Available	571	Open in IMG/M
3300009168\|Ga0105104_10528746	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	666	Open in IMG/M
3300009518\|Ga0116128_1217903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009521\|Ga0116222_1214432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300009521\|Ga0116222_1388736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009547\|Ga0116136_1067108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300009614\|Ga0116104_1069951	Not Available	730	Open in IMG/M
3300009634\|Ga0116124_1141095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300009700\|Ga0116217_10411314	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300009764\|Ga0116134_1094529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300009839\|Ga0116223_10245546	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300009839\|Ga0116223_10291765	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300010048\|Ga0126373_13316837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	501	Open in IMG/M
3300010358\|Ga0126370_10620272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300010376\|Ga0126381_100329107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2104	Open in IMG/M
3300010379\|Ga0136449_100344620	All Organisms → cellular organisms → Bacteria → Acidobacteria	2682	Open in IMG/M
3300011269\|Ga0137392_10408648	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300012199\|Ga0137383_10368259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300012202\|Ga0137363_11721371	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012211\|Ga0137377_11415046	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300012356\|Ga0137371_10521823	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300012362\|Ga0137361_10245306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1631	Open in IMG/M
3300012924\|Ga0137413_10110892	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300012930\|Ga0137407_10046161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3510	Open in IMG/M
3300013102\|Ga0157371_10990432	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300013296\|Ga0157374_11976516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300013307\|Ga0157372_11585013	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300014159\|Ga0181530_10458153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300014489\|Ga0182018_10016004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5104	Open in IMG/M
3300014489\|Ga0182018_10375794	Not Available	763	Open in IMG/M
3300014501\|Ga0182024_10122435	All Organisms → cellular organisms → Bacteria	3718	Open in IMG/M
3300015241\|Ga0137418_10471144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300017933\|Ga0187801_10464304	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300017935\|Ga0187848_10296322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300017940\|Ga0187853_10172911	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300017943\|Ga0187819_10010701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5193	Open in IMG/M
3300017943\|Ga0187819_10271947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300017955\|Ga0187817_10616291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300017972\|Ga0187781_10318154	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300017995\|Ga0187816_10016987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2805	Open in IMG/M
3300017995\|Ga0187816_10295083	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300018034\|Ga0187863_10040226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2713	Open in IMG/M
3300018037\|Ga0187883_10096043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542	Open in IMG/M
3300018040\|Ga0187862_10013144	All Organisms → cellular organisms → Bacteria → Proteobacteria	6819	Open in IMG/M
3300018042\|Ga0187871_10772280	Not Available	536	Open in IMG/M
3300018088\|Ga0187771_11544146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300018482\|Ga0066669_12051012	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300019881\|Ga0193707_1073968	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300020015\|Ga0193734_1038689	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300020579\|Ga0210407_10299450	All Organisms → cellular organisms → Bacteria → Acidobacteria	1256	Open in IMG/M
3300020579\|Ga0210407_10869124	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300020580\|Ga0210403_10719276	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300020581\|Ga0210399_10738804	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300020582\|Ga0210395_10687254	Not Available	766	Open in IMG/M
3300021178\|Ga0210408_10804438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300021181\|Ga0210388_11575400	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300021401\|Ga0210393_10293909	Not Available	1319	Open in IMG/M
3300021405\|Ga0210387_10004101	All Organisms → cellular organisms → Bacteria	11170	Open in IMG/M
3300021405\|Ga0210387_11343738	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300021407\|Ga0210383_11581725	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300021420\|Ga0210394_10221534	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300021420\|Ga0210394_11153478	Not Available	667	Open in IMG/M
3300021477\|Ga0210398_10427279	Not Available	1080	Open in IMG/M
3300021479\|Ga0210410_10068950	All Organisms → cellular organisms → Bacteria → Acidobacteria	3099	Open in IMG/M
3300021479\|Ga0210410_10630209	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300022557\|Ga0212123_10893941	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025320\|Ga0209171_10635319	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300025414\|Ga0208935_1042519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300025506\|Ga0208937_1037236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300025612\|Ga0208691_1012492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2106	Open in IMG/M
3300025898\|Ga0207692_10729402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300025905\|Ga0207685_10540271	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300025911\|Ga0207654_10224915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300025911\|Ga0207654_10902379	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300025916\|Ga0207663_10780692	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300025918\|Ga0207662_10548666	Not Available	800	Open in IMG/M
3300025920\|Ga0207649_10025475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3448	Open in IMG/M
3300025927\|Ga0207687_10332322	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300025928\|Ga0207700_10961111	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300025939\|Ga0207665_10830350	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300025944\|Ga0207661_11195053	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300026309\|Ga0209055_1042701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1995	Open in IMG/M
3300026497\|Ga0257164_1068256	Not Available	589	Open in IMG/M
3300026538\|Ga0209056_10374458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300027546\|Ga0208984_1069634	Not Available	758	Open in IMG/M
3300027562\|Ga0209735_1079331	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300027568\|Ga0208042_1167913	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300027660\|Ga0209736_1132128	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300027674\|Ga0209118_1194211	Not Available	549	Open in IMG/M
3300027698\|Ga0209446_1058964	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300027812\|Ga0209656_10431302	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300027846\|Ga0209180_10208049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300027854\|Ga0209517_10108178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1855	Open in IMG/M
3300027867\|Ga0209167_10183660	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300027895\|Ga0209624_10307243	Not Available	1056	Open in IMG/M
3300027905\|Ga0209415_10147342	All Organisms → cellular organisms → Bacteria → Acidobacteria	2378	Open in IMG/M
3300027908\|Ga0209006_10724894	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	812	Open in IMG/M
3300027986\|Ga0209168_10024475	All Organisms → cellular organisms → Bacteria → Acidobacteria	3379	Open in IMG/M
3300028047\|Ga0209526_10135093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1731	Open in IMG/M
3300028379\|Ga0268266_12252090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300028536\|Ga0137415_10241037	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300030763\|Ga0265763_1028513	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300030862\|Ga0265753_1044160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300031234\|Ga0302325_10976451	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300031446\|Ga0170820_14499697	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300031708\|Ga0310686_102728950	Not Available	1169	Open in IMG/M
3300031708\|Ga0310686_103752102	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031708\|Ga0310686_114808754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300031708\|Ga0310686_117682949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4697	Open in IMG/M
3300031715\|Ga0307476_10889863	Not Available	657	Open in IMG/M
3300031718\|Ga0307474_11040565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031753\|Ga0307477_10025789	All Organisms → cellular organisms → Bacteria	4016	Open in IMG/M
3300031753\|Ga0307477_11002511	Not Available	548	Open in IMG/M
3300031754\|Ga0307475_10117324	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300031754\|Ga0307475_10450307	Not Available	1035	Open in IMG/M
3300031823\|Ga0307478_10109644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2149	Open in IMG/M
3300031823\|Ga0307478_10573544	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031962\|Ga0307479_10359795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1439	Open in IMG/M
3300031962\|Ga0307479_11424679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300032174\|Ga0307470_10027014	All Organisms → cellular organisms → Bacteria	2679	Open in IMG/M
3300032180\|Ga0307471_102805043	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300032180\|Ga0307471_104158433	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300032783\|Ga0335079_11288411	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032805\|Ga0335078_11229429	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300034817\|Ga0373948_0159591	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.54%
Host-Associated	Host-Associated	10.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.93%
Aquatic	Environmental → Aquatic	19.61%
Plants	Host-Associated → Plants	10.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.28%
Freshwater	Environmental → Aquatic → Freshwater	15.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.96%
Sediment	Environmental → Aquatic → Sediment	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.31%
Peat	Environmental → Terrestrial → Peat	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.03%
Loam	Environmental → Terrestrial → Soil → Loam	15.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.23%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.23%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.27%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.31%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1028020992	3300000955	Soil	MAANQVVIYFDKQEDALLFTLAASLVMAAEGPVHSHHA
JGI12635J15846_106187111	3300001593	Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVRSSKAVAKV
JGI12627J18819_104295361	3300001867	Forest Soil	MAASQVVLYFDKQEDALLFTLAASSVMSADGAARTNEVVARVAA
JGI25382J43887_102190522	3300002908	Grasslands Soil	MAAYQVVLYFDKQEDALLFTLAASSIMSAEGPLHSGDAGV
Ga0066395_105591262	3300004633	Tropical Forest Soil	MASQVVLYFEKQEDAVLFALAASSVISDGVKGPSDAAGKVAEEIRK
Ga0066388_1080114721	3300005332	Tropical Forest Soil	VAVNQVVLFFDKQEDALLFTLAASSIMSEHAPHSSDATAKVA
Ga0070713_1017947061	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPARRNDAVA
Ga0066681_105130692	3300005451	Soil	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALV
Ga0070735_101351632	3300005534	Surface Soil	MAANQVVLYFEKPEDALLFTLAASSVMSSDGSTHNSKAAVKVAQEISKA
Ga0070665_1022961591	3300005548	Switchgrass Rhizosphere	VAAKHVVLYFDKQEDALLFTLAASSVMSAEGPLHS
Ga0068854_1000096341	3300005578	Corn Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPLRGTKA
Ga0070761_107673072	3300005591	Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAGSPVHSNQAA
Ga0066706_107178161	3300005598	Soil	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALVKIADEIRKASR
Ga0068860_1027110113	3300005843	Switchgrass Rhizosphere	MAASQVVLYFDKPEDALLFTLAASSMISDDGPGRA
Ga0070717_104600981	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSIIADGAPLRESALK
Ga0075023_1001408011	3300006041	Watersheds	VHIAANQVVLYFDKQADALLFTLAASSVMSAEGPVH
Ga0075028_1007510341	3300006050	Watersheds	MAASQVVLYFDKQEDALLFTLAASSMISDEGPAGAGEALV
Ga0075017_1008843001	3300006059	Watersheds	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHSRDAVAKVAEEIC
Ga0070716_1000327034	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAASQVVLYFDKPEDALLFTLAASSMISDDGPARANEALVK
Ga0075433_100247316	3300006852	Populus Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSVMSADEPVRPEEAGAR
Ga0075436_1005837851	3300006914	Populus Rhizosphere	MSANQVVLYFDKQEDALLFTAAASSVMSAEGPVYRSDAV
Ga0102924_11480123	3300007982	Iron-Sulfur Acid Spring	MAANQVVLYFEKPEDALLFTLAASSVMSAEGAVHS
Ga0066710_1003270473	3300009012	Grasslands Soil	MATNQVVLYFDEQEDALLFTLAASSAMSAEGQLHSGDAAV
Ga0105245_124917041	3300009098	Miscanthus Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEAL
Ga0105104_105287461	3300009168	Freshwater Sediment	VLYFDKQEDALLFTLAASSVMSAEGPLHSSDAIVKVA
Ga0116128_12179031	3300009518	Peatland	MAANQVVLYFERPEDALLFTLAASSVMSAEGQVHSN
Ga0116222_12144321	3300009521	Peatlands Soil	MHMAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHSSVAA
Ga0116222_13887361	3300009521	Peatlands Soil	MAANQVVLYFDKQEDALLFTLAASSIMSAEGPVHSSDAVVKV
Ga0116136_10671082	3300009547	Peatland	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHSSVAAAKVAEEISK
Ga0116104_10699511	3300009614	Peatland	MAASQVVLYFDKKEDALLFTLAASSVMSAEGPVHSSDAMVKVAEE
Ga0116124_11410951	3300009634	Peatland	MAANQVVLYFERPEDALLFTLAASSVMSAEGQVHSNKAAARVAE
Ga0116217_104113142	3300009700	Peatlands Soil	MKMAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVK
Ga0116134_10945292	3300009764	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHRGDAAVK
Ga0116223_102455462	3300009839	Peatlands Soil	MKMAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHG
Ga0116223_102917651	3300009839	Peatlands Soil	MAANQVVLYFDKKEDALLFTLAASSVMSAEGPVHGSDAVVKVAEE
Ga0126373_133168372	3300010048	Tropical Forest Soil	MAANQVVLYFEKPEDALLFTLAASSVMSADGSTHNSKAAVRVA
Ga0126370_106202722	3300010358	Tropical Forest Soil	VVLYFDKQEDALLFTLAASSVMSAEGPVHSNDAVVKFAEEICK
Ga0126381_1003291073	3300010376	Tropical Forest Soil	MATNQVVLYFEKPENALLFTLAASSVMSAEGPLHSNKAA
Ga0136449_1003446201	3300010379	Peatlands Soil	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHSSV
Ga0137392_104086482	3300011269	Vadose Zone Soil	MAANQVVLYFDNQQDALLFTLAASSVMSAEGPVHSSKAAV
Ga0137383_103682592	3300012199	Vadose Zone Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSNK
Ga0137363_117213711	3300012202	Vadose Zone Soil	MAASQVVLYFDKPEDALLFTLAASSMISEDAPGRAN
Ga0137377_114150461	3300012211	Vadose Zone Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPGRASEALVKVA
Ga0137371_105218233	3300012356	Vadose Zone Soil	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALVKIADEIRKA
Ga0137361_102453063	3300012362	Vadose Zone Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEALVKVAAEIRKA
Ga0137413_101108921	3300012924	Vadose Zone Soil	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVHRGDAAVKVAEEICKVR
Ga0137407_100461613	3300012930	Vadose Zone Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHRSVAVVKVAEEICKA
Ga0157371_109904322	3300013102	Corn Rhizosphere	MAASQVVLYFDKPEDALLFTLAASSMISDDGPGRADEALVKVAAEIRKAS
Ga0157374_119765161	3300013296	Miscanthus Rhizosphere	MAANQVVLYFEKPEDALLFTLAASSVMSAEGSVYS
Ga0157372_115850132	3300013307	Corn Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARA
Ga0120132_10514991	3300013832	Permafrost	MAASQVVLYFDRQEDALLFTLAASSVITADEPNRTD
Ga0181530_104581531	3300014159	Bog	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHSSVAAAKVAEEIC
Ga0182018_100160047	3300014489	Palsa	MAANQVVLYFDKHEDAVLFTLAASSIMSAEGPVQS
Ga0182018_103757941	3300014489	Palsa	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVRSSDAVVKV
Ga0182024_101224354	3300014501	Permafrost	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVRSS
Ga0137418_104711441	3300015241	Vadose Zone Soil	MAANQVVVYFDTQQDALLFTLAASSVMSTEGSVHSSKA
Ga0187801_104643042	3300017933	Freshwater Sediment	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSD
Ga0187848_102963221	3300017935	Peatland	MAANQVVLYFERPEDALLFTLAASSVMSAEGQVHSNKAAARVAEEI
Ga0187853_101729112	3300017940	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHRGDAAVKVA
Ga0187819_100107011	3300017943	Freshwater Sediment	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVKV
Ga0187819_102719471	3300017943	Freshwater Sediment	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPAHSSDAA
Ga0187817_106162911	3300017955	Freshwater Sediment	MAANQVVVYFDKQEDALLFTLAASSVMSAEGPVRSSAAV
Ga0187781_103181541	3300017972	Tropical Peatland	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPTHNRDAAVKVA
Ga0187816_100169871	3300017995	Freshwater Sediment	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVK
Ga0187816_102950831	3300017995	Freshwater Sediment	MAVNQVVVYFDKQEDAVLFTLAASSVMSAEGPVRSSAAVVK
Ga0187863_100402264	3300018034	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVHS
Ga0187883_100960431	3300018037	Peatland	MAANQVVLYFDKHEDAVLFTLAASSVMSAEGPVQSSDAANKVAEEI
Ga0187862_100131448	3300018040	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVPSGDAAVKVAEEISK
Ga0187871_107722801	3300018042	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVHRSD
Ga0187771_115441461	3300018088	Tropical Peatland	MAANQVVLYFDKQEDALLFTLAASTAMSAEEPTRASEAGLRMAKEIC
Ga0066669_120510122	3300018482	Grasslands Soil	MAAYQVMLYFDKQEDALLFTLAASSIMSAEGPLHS
Ga0193707_10739682	3300019881	Soil	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALVKI
Ga0193755_10111711	3300020004	Soil	MGEVLQMAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALVKIAD
Ga0193734_10386892	3300020015	Soil	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRA
Ga0210407_102994502	3300020579	Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSSKAAV
Ga0210407_108691242	3300020579	Soil	MAASQVVLYFDKQEDALLFTLAASSMISEDGPARADEALVKVAAEIRKA
Ga0210403_107192761	3300020580	Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEALV
Ga0210399_107388042	3300020581	Soil	MAANQVVLYFEKPEDALLFTVAASSVMSAEGAVHSSK
Ga0210395_106872542	3300020582	Soil	MSANQVVLYFDKQEDALLFTLAASSVMSGEGPVHR
Ga0210408_108044381	3300021178	Soil	MATNQVVLYFDEQKDALLFTLAASSAMSAEGPLHRGDAAVKVAGA
Ga0210388_115754002	3300021181	Soil	MAANQVVLYFEKPEDALLFTVAASSVMSAEGAVHSS
Ga0210393_102939091	3300021401	Soil	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVNGSDAVVK
Ga0210387_1000410112	3300021405	Soil	MAANQVILYFDNQEDAVLFTLAASSVMSAEEPTESSNAA
Ga0210387_113437381	3300021405	Soil	MAANQVVLYFEKPEDALLFTVAASSVMSAEGAVHSSKAAVR
Ga0210383_106964491	3300021407	Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSSKAAVKVAEEICKD
Ga0210383_115817251	3300021407	Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPTRANEALVKIAAEIRKA
Ga0210394_102215341	3300021420	Soil	MAANQVVLYFEKPEDALLFTLAASSVMSAEGAVHSS
Ga0210394_111534781	3300021420	Soil	MSANQVVLYFDKQEDALLFTLAASSVMSAEGSVHR
Ga0210398_104272791	3300021477	Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSSKAAVKV
Ga0210410_100689506	3300021479	Soil	MAANQVVLYFEKPEDALLFTVAASSVMSAEGAVHSSKA
Ga0210410_106302092	3300021479	Soil	MAASQVVLYFDKQEDALLFTLAASSVISPDGPGRKD
Ga0212123_108939411	3300022557	Iron-Sulfur Acid Spring	VAANQVVLYFDKQEDAVLFTLAASSVMSAEGPMRGSDAMVKVAKEICK
Ga0209171_106353191	3300025320	Iron-Sulfur Acid Spring	MAANQGVLYSDKQEDALLFTLAASSVMSTEGPVRSTAAVAKVAE
Ga0208935_10425191	3300025414	Peatland	MGTNQVVLYFDKQEDALLFTLAASSVMSAEESVRSSKAAVRV
Ga0208937_10372361	3300025506	Peatland	MAANEVVLYFDKHEDAVLFTLAASSVMSAEGPLQSSNAGD
Ga0208691_10124923	3300025612	Peatland	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVHSSDAV
Ga0207692_107294021	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAANQVVLYFEKPEDALLFTLAASSVMSAEGSVYSSKAAV
Ga0207685_105402711	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAANQVVLYFEKPEDALLFTLAASSVMSAEGPVHGNKAVVRVAQEI
Ga0207654_102249151	3300025911	Corn Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPLRGTKAADKVADE
Ga0207654_109023792	3300025911	Corn Rhizosphere	MSANQVVIYFDKQEDALLFTLAASSVMSAEGSVDQSDAVVK
Ga0207663_107806921	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSGEGPLHSNDPVINFAE
Ga0207662_105486662	3300025918	Switchgrass Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSMISDEGPARADEALVKVAA
Ga0207649_100254751	3300025920	Corn Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEALVKVGA
Ga0207649_105308932	3300025920	Corn Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPLRGTKAADKVADEICKA
Ga0207687_103323221	3300025927	Miscanthus Rhizosphere	MSANQVVIYFDKQEDALLFTLAASSVMSAEGSVEQS
Ga0207700_109611111	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPARRNDAVAK
Ga0207665_108303502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAASQVVLYFDKQEDALLFTLAASSVISSEAPVRAKEALVKIA
Ga0207661_111950531	3300025944	Corn Rhizosphere	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPLRGTK
Ga0209055_10427011	3300026309	Soil	MAAYQVVLYFDKQEDALLFTLAASSIMSAEGPLHS
Ga0257164_10682561	3300026497	Soil	MAASQVVLYFDKQEDALLFTLAASSMISDEGPAGAGEALVKIAAEIR
Ga0209056_103744581	3300026538	Soil	MATKQVVLYFEKPEDALLFTLAASSVMSAEASIHSSKAAVRVAEGLCKA
Ga0208368_1008571	3300027161	Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPLHSNDPVINFAEQICKAR
Ga0208984_10696341	3300027546	Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHS
Ga0209735_10793311	3300027562	Forest Soil	MAANQVVLYFDTQQDALLFALAASSVMSAEGPVHSN
Ga0208042_11679131	3300027568	Peatlands Soil	MAASQVVLYFDKQEDALLFTLAASSVMSAEGPARGSEAVAKVA
Ga0209736_11321281	3300027660	Forest Soil	MAASQVVLYFDKQEDALLFTLAASSVIGADKSVRGNQSA
Ga0209118_11942112	3300027674	Forest Soil	MAVNQVVLYFDKEQDALLFTLAASSLMSGERQGLTSKAADRV
Ga0209446_10589641	3300027698	Bog Forest Soil	MAANQVVLYFDKQEDALLFTLAASTVMSEDGPVRGS
Ga0209656_104313021	3300027812	Bog Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSEEGPVRSS
Ga0209180_102080492	3300027846	Vadose Zone Soil	MAANQVVLYFDKQEDALLFALAASSVMSAERPVHSGD
Ga0209517_101081781	3300027854	Peatlands Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVRGSDA
Ga0209167_101836601	3300027867	Surface Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHG
Ga0209624_103072431	3300027895	Forest Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSSKAAVKVA
Ga0209415_101473424	3300027905	Peatlands Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVKVAEEIS
Ga0209006_107248941	3300027908	Forest Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSS
Ga0209168_100244753	3300027986	Surface Soil	MAANQVVLYFEKPEDALLFTLAASSVMSAEGPSSKAAV
Ga0209526_101350933	3300028047	Forest Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEALVKVAAEIRKAN
Ga0268266_122520901	3300028379	Switchgrass Rhizosphere	VAAKHVVLYFDKQEDALLFTLAASSVMSAEGPLHSS
Ga0137415_102410373	3300028536	Vadose Zone Soil	MATNRVVLYFDEQEDALLFTLAASSAMSAEGPLHSGDAAVK
Ga0265763_10285132	3300030763	Soil	MAASQVVLYFDKQEDALLFTLAASSVMSAEGQVHSSDAVVKVA
Ga0265753_10441601	3300030862	Soil	MAANQVVLYFDKQEDAMRFTLAASSVMSAEGPVLYSNRAVLKVAEEI
Ga0302325_109764511	3300031234	Palsa	MTTNQVILYFDNQEDAVLFTLAASSVMSAEEPTDSSNAAA
Ga0170820_144996971	3300031446	Forest Soil	MAASQVVLYFDKPEDALLFTLAASSMISEDAPGRANEALVKVAAEIRK
Ga0310686_1027289502	3300031708	Soil	MAANQVVLYFDKQEDALLFTLAASSVMSADGPVHSSDAVV
Ga0310686_1037521022	3300031708	Soil	MAANQVVLYFDKEEDALLFTLAASSVMSAEGPMRGSDAVAKVA
Ga0310686_1148087542	3300031708	Soil	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHGNAAVVKVAMDRSFR
Ga0310686_1176829491	3300031708	Soil	MAANQVVLYFDKQEDAVLFTLAASSVMSAEGPVHGSDA
Ga0307476_108898631	3300031715	Hardwood Forest Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSSKAA
Ga0307474_110405652	3300031718	Hardwood Forest Soil	MAANQVVLYFEKPEDALLFTLAASSVLSAEGAVHSSKAAVRV
Ga0307477_100257891	3300031753	Hardwood Forest Soil	MAVNQVVLYFDKEQDALLFTLAASSVMSAEGPGPS
Ga0307477_110025111	3300031753	Hardwood Forest Soil	MASNQVVLYFDTQQDALLFTLAASSVMSAEGPAHSNKAAVRVAEEICK
Ga0307475_101173245	3300031754	Hardwood Forest Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVHSNKAAF
Ga0307475_104503071	3300031754	Hardwood Forest Soil	MAANQVVLYFDTQQDALLFTLAASSVMSAEGPVYSNKAAVR
Ga0307478_101096443	3300031823	Hardwood Forest Soil	MAANQVVLYFEKPEDALLFTLAASSVMSAEGSLHSSKAAVRVAQ
Ga0307478_105735442	3300031823	Hardwood Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHGSDAVVKVAEEI
Ga0307479_103597953	3300031962	Hardwood Forest Soil	MAASQVVLYFDKQEDALLFTLAASSMISEDGPARADE
Ga0307479_114246791	3300031962	Hardwood Forest Soil	MAANQVVLYFDKQEDALLFTLAASSVMSAEGPVHSSNAAVKV
Ga0307470_100270141	3300032174	Hardwood Forest Soil	MAANQVVLYFEKPEDALLFTLAASSVMSAEGPVHSSK
Ga0307471_1028050432	3300032180	Hardwood Forest Soil	MAANQVVLYFEKPEDALLFTLAASSVMSAEGAVHSSKAAFRVAQEIC
Ga0307471_1041584332	3300032180	Hardwood Forest Soil	MAASQVVLYFDKQEDALLFTLAASSVISPEGPGRANEALVKIAEEICKA
Ga0335079_112884112	3300032783	Soil	MAASQVVVYFEKQEDALLFTLAASSAISAEEPLGAT
Ga0335078_112294291	3300032805	Soil	MAASQVVLYFDKQEDALLFTLAASSVMAADGPVHAEEAVMKIATEICKA
Ga0373948_0159591_2_133	3300034817	Rhizosphere Soil	MAASQVVLYFDKQEDALLFTLAASSMISDDGPARADEALVKVAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences