Metagenome / Metatranscriptome Family F045334

Basic Information
Family ID	F045334
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	43 residues
Representative Sequence	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPL
Number of Associated Samples	127
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.82 %
% of genes near scaffold ends (potentially truncated)	99.35 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (58.170 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.876 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.634 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
Feature Viewer

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Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF04343	DUF488	5.23
PF03401	TctC	2.61
PF02798	GST_N	2.61
PF04392	ABC_sub_bind	1.96
PF01520	Amidase_3	1.96
PF01227	GTP_cyclohydroI	1.96
PF00528	BPD_transp_1	1.96
PF00501	AMP-binding	1.31
PF03734	YkuD	1.31
PF06577	EipA	1.31
PF05099	TerB	1.31
PF00326	Peptidase_S9	1.31
PF01464	SLT	1.31
PF14435	SUKH-4	0.65
PF02627	CMD	0.65
PF00196	GerE	0.65
PF12975	DUF3859	0.65
PF08666	SAF	0.65
PF13792	Obsolete Pfam Family	0.65
PF01042	Ribonuc_L-PSP	0.65
PF14196	ATC_hydrolase	0.65
PF01575	MaoC_dehydratas	0.65
PF13545	HTH_Crp_2	0.65
PF09084	NMT1	0.65
PF02771	Acyl-CoA_dh_N	0.65
PF10768	FliX	0.65
PF13701	DDE_Tnp_1_4	0.65
PF01435	Peptidase_M48	0.65
PF02954	HTH_8	0.65
PF01717	Meth_synt_2	0.65
PF08327	AHSA1	0.65
PF00211	Guanylate_cyc	0.65
PF00378	ECH_1	0.65
PF03992	ABM	0.65
PF00144	Beta-lactamase	0.65
PF14023	DUF4239	0.65
PF04828	GFA	0.65
PF00484	Pro_CA	0.65
PF01625	PMSR	0.65
PF08241	Methyltransf_11	0.65
PF01548	DEDD_Tnp_IS110	0.65
PF08240	ADH_N	0.65
PF07690	MFS_1	0.65
PF10397	ADSL_C	0.65
PF08734	GYD	0.65
PF00884	Sulfatase	0.65
PF01841	Transglut_core	0.65
PF12799	LRR_4	0.65
PF12244	DUF3606	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	5.23
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.61
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.96
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.31
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.31
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	1.31
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.65
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.65
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.65
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.65
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.65
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.65
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.65
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.65
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.65
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.65
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.65
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.65
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.17 %
Unclassified	root	N/A	41.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.17 %
Unclassified	root	N/A	41.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.17 %
Unclassified	root	N/A	41.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.75 %
Unclassified	root	N/A	41.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.37 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.31 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.65 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.23 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.31 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.65 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.65 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.31 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.65 %
Pseudoxanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.65 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.65 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.65 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.65 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.65 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.65 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.65 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.65 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.65 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.65 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.23 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.31 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Tardiphaga sp. vice352	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	0.65 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.65 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.65 %
Marinobacter similis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	0.65 %
Gimesia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	0.65 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.65 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	0.65 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.65 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.65 %
Pseudoxanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	0.65 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1001742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3476	Open in IMG/M
3300003505\|JGIcombinedJ51221_10268623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300004152\|Ga0062386_100638140	Not Available	872	Open in IMG/M
3300004633\|Ga0066395_10122573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M
3300005332\|Ga0066388_100374206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2071	Open in IMG/M
3300005332\|Ga0066388_105325092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	652	Open in IMG/M
3300005332\|Ga0066388_105906991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300005339\|Ga0070660_100408041	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300005347\|Ga0070668_101960217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300005549\|Ga0070704_100484495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	1071	Open in IMG/M
3300005577\|Ga0068857_101030393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300005713\|Ga0066905_100460025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300005713\|Ga0066905_101849760	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_100776125	Not Available	1708	Open in IMG/M
3300005764\|Ga0066903_101186060	Not Available	1416	Open in IMG/M
3300005764\|Ga0066903_102442377	Not Available	1011	Open in IMG/M
3300005764\|Ga0066903_102722072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	959	Open in IMG/M
3300005764\|Ga0066903_104161724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	774	Open in IMG/M
3300005764\|Ga0066903_104933429	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia	708	Open in IMG/M
3300006032\|Ga0066696_11027439	Not Available	524	Open in IMG/M
3300006038\|Ga0075365_10075730	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300006050\|Ga0075028_101011182	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300006059\|Ga0075017_100169091	Not Available	1566	Open in IMG/M
3300006102\|Ga0075015_100403147	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300006172\|Ga0075018_10441495	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300006354\|Ga0075021_10169630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1325	Open in IMG/M
3300006806\|Ga0079220_11473556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	582	Open in IMG/M
3300006845\|Ga0075421_101351525	Not Available	786	Open in IMG/M
3300006852\|Ga0075433_10636365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300006852\|Ga0075433_11931194	Not Available	506	Open in IMG/M
3300006854\|Ga0075425_100070418	All Organisms → cellular organisms → Bacteria	3938	Open in IMG/M
3300006880\|Ga0075429_100625004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300009094\|Ga0111539_13052666	Not Available	541	Open in IMG/M
3300009100\|Ga0075418_11917675	Not Available	645	Open in IMG/M
3300009143\|Ga0099792_11090956	Not Available	537	Open in IMG/M
3300009147\|Ga0114129_10575423	Not Available	1462	Open in IMG/M
3300009147\|Ga0114129_11350885	Not Available	881	Open in IMG/M
3300009522\|Ga0116218_1177775	Not Available	964	Open in IMG/M
3300009545\|Ga0105237_11753513	Not Available	628	Open in IMG/M
3300010043\|Ga0126380_10014872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3597	Open in IMG/M
3300010047\|Ga0126382_10013089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4064	Open in IMG/M
3300010047\|Ga0126382_11509113	Not Available	618	Open in IMG/M
3300010048\|Ga0126373_12188755	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010154\|Ga0127503_10199046	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300010359\|Ga0126376_10078602	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300010359\|Ga0126376_10504742	Not Available	1120	Open in IMG/M
3300010359\|Ga0126376_12800395	Not Available	537	Open in IMG/M
3300010360\|Ga0126372_10745952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	962	Open in IMG/M
3300010361\|Ga0126378_10133424	All Organisms → cellular organisms → Bacteria → Proteobacteria	2506	Open in IMG/M
3300010361\|Ga0126378_10147688	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300010361\|Ga0126378_10744319	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300010361\|Ga0126378_13045278	Not Available	534	Open in IMG/M
3300010362\|Ga0126377_10170662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. vice352	2061	Open in IMG/M
3300010373\|Ga0134128_11478616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300010376\|Ga0126381_100725217	Not Available	1423	Open in IMG/M
3300010376\|Ga0126381_101095188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pseudoxanthobacteraceae → Pseudoxanthobacter	1151	Open in IMG/M
3300010398\|Ga0126383_12937265	Not Available	557	Open in IMG/M
3300010398\|Ga0126383_13671361	Not Available	501	Open in IMG/M
3300011119\|Ga0105246_10660746	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300012677\|Ga0153928_1090469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300012929\|Ga0137404_12105898	Not Available	527	Open in IMG/M
3300012948\|Ga0126375_12081747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300012971\|Ga0126369_10896971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300012984\|Ga0164309_11151219	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300012988\|Ga0164306_11687739	Not Available	549	Open in IMG/M
3300012989\|Ga0164305_10333018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300014317\|Ga0075343_1127085	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300014968\|Ga0157379_10692379	Not Available	956	Open in IMG/M
3300014969\|Ga0157376_11816838	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300015371\|Ga0132258_12622691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1259	Open in IMG/M
3300015372\|Ga0132256_102895325	Not Available	577	Open in IMG/M
3300016270\|Ga0182036_11263283	Not Available	615	Open in IMG/M
3300016357\|Ga0182032_11127259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300016371\|Ga0182034_11093750	Not Available	691	Open in IMG/M
3300016387\|Ga0182040_10825957	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300016404\|Ga0182037_12091571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300016422\|Ga0182039_11781712	Not Available	564	Open in IMG/M
3300016445\|Ga0182038_10694429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300017972\|Ga0187781_10923834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300017974\|Ga0187777_10135022	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300017974\|Ga0187777_10184777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300018085\|Ga0187772_10868554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300020579\|Ga0210407_10920743	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300021168\|Ga0210406_10395893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1107	Open in IMG/M
3300021168\|Ga0210406_10416994	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300021171\|Ga0210405_10496038	Not Available	957	Open in IMG/M
3300021404\|Ga0210389_10951791	Not Available	667	Open in IMG/M
3300021420\|Ga0210394_11202384	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300021478\|Ga0210402_10608932	Not Available	1012	Open in IMG/M
3300021560\|Ga0126371_10309795	Not Available	1708	Open in IMG/M
3300021560\|Ga0126371_10635885	Not Available	1216	Open in IMG/M
3300022756\|Ga0222622_10885326	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300025899\|Ga0207642_10324096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	901	Open in IMG/M
3300025915\|Ga0207693_10110770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2152	Open in IMG/M
3300025918\|Ga0207662_10849329	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300025935\|Ga0207709_10884186	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300025941\|Ga0207711_11284266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300026088\|Ga0207641_11707898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300026475\|Ga0257147_1020082	Not Available	931	Open in IMG/M
3300027003\|Ga0207722_1012776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter similis	964	Open in IMG/M
3300027568\|Ga0208042_1063035	Not Available	944	Open in IMG/M
3300027604\|Ga0208324_1099525	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300027725\|Ga0209178_1160014	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300027738\|Ga0208989_10012841	All Organisms → cellular organisms → Bacteria → Proteobacteria	2866	Open in IMG/M
3300027880\|Ga0209481_10357958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	745	Open in IMG/M
3300028047\|Ga0209526_10423101	Not Available	880	Open in IMG/M
3300028814\|Ga0307302_10040486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2159	Open in IMG/M
3300030580\|Ga0311355_11063156	Not Available	723	Open in IMG/M
3300030916\|Ga0075386_11630539	Not Available	533	Open in IMG/M
3300031096\|Ga0308193_1026859	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300031446\|Ga0170820_14486452	Not Available	1096	Open in IMG/M
3300031446\|Ga0170820_16586615	Not Available	1400	Open in IMG/M
3300031474\|Ga0170818_113490885	Not Available	959	Open in IMG/M
3300031543\|Ga0318516_10807772	Not Available	530	Open in IMG/M
3300031572\|Ga0318515_10108922	Not Available	1458	Open in IMG/M
3300031573\|Ga0310915_10374023	Not Available	1011	Open in IMG/M
3300031719\|Ga0306917_10030899	All Organisms → cellular organisms → Bacteria → Proteobacteria	3438	Open in IMG/M
3300031719\|Ga0306917_11067052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	630	Open in IMG/M
3300031720\|Ga0307469_11750256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300031744\|Ga0306918_10316673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300031747\|Ga0318502_11021683	Not Available	504	Open in IMG/M
3300031748\|Ga0318492_10442636	Not Available	686	Open in IMG/M
3300031751\|Ga0318494_10360545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300031764\|Ga0318535_10461069	Not Available	566	Open in IMG/M
3300031768\|Ga0318509_10259355	Not Available	971	Open in IMG/M
3300031779\|Ga0318566_10657177	Not Available	509	Open in IMG/M
3300031782\|Ga0318552_10231401	Not Available	937	Open in IMG/M
3300031782\|Ga0318552_10258137	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031797\|Ga0318550_10284204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300031819\|Ga0318568_10527696	Not Available	736	Open in IMG/M
3300031833\|Ga0310917_11112897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	527	Open in IMG/M
3300031847\|Ga0310907_10471761	Not Available	667	Open in IMG/M
3300031879\|Ga0306919_11219165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031896\|Ga0318551_10089120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1627	Open in IMG/M
3300031910\|Ga0306923_11260871	Not Available	786	Open in IMG/M
3300031941\|Ga0310912_10051104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	2905	Open in IMG/M
3300031946\|Ga0310910_10828033	Not Available	728	Open in IMG/M
3300031981\|Ga0318531_10398445	Not Available	623	Open in IMG/M
3300032000\|Ga0310903_10318714	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300032010\|Ga0318569_10569255	Not Available	528	Open in IMG/M
3300032025\|Ga0318507_10439058	Not Available	568	Open in IMG/M
3300032043\|Ga0318556_10131704	Not Available	1283	Open in IMG/M
3300032059\|Ga0318533_10335744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1099	Open in IMG/M
3300032060\|Ga0318505_10003895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4728	Open in IMG/M
3300032076\|Ga0306924_12416340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300032261\|Ga0306920_100872109	Not Available	1317	Open in IMG/M
3300032261\|Ga0306920_103423934	Not Available	588	Open in IMG/M
3300033004\|Ga0335084_10800747	Not Available	957	Open in IMG/M
3300033289\|Ga0310914_10488193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300033289\|Ga0310914_10970564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300033290\|Ga0318519_10797396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300033433\|Ga0326726_10468221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1202	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.66%
Host-Associated	Host-Associated	16.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.78%
Plants	Host-Associated → Plants	15.69%
Aquatic	Environmental → Aquatic	5.88%
Fungi	Host-Associated → Fungi	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.42%
Sediment	Environmental → Aquatic → Sediment	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%
Freshwater	Environmental → Aquatic → Freshwater	1.96%
Peat	Environmental → Terrestrial → Peat	1.31%
Roots	Host-Associated → Plants → Roots	0.65%
Mycelium	Host-Associated → Fungi → Mycelium	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.13%
Loam	Environmental → Terrestrial → Soil → Loam	12.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.65%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.65%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.65%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045334

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10017421	3300000580	Forest Soil	MHAAARLLAALILAAAGSAVAQEKHLIDPTPPGSLNP
JGIcombinedJ51221_102686231	3300003505	Forest Soil	MRAAARLVAVFLFALAGSAAAQEKHLIDPTPPGSLNPEPL
Ga0062386_1006381403	3300004152	Bog Forest Soil	MRATVRLLAILILAAAGSAVAQEKHLIDPTPPGSLNPEPLPP
Ga0066395_101225732	3300004633	Tropical Forest Soil	MRAVVCLLAALFLAAASSAVAQEKHLIDPMLPGSLDPKPLPPLKNPDAPS
Ga0066388_1003742063	3300005332	Tropical Forest Soil	MRHRLIRWLLMRAAGRLLAVLLFAAAGSAVAQQKHLIDSTPPGSLNPEPL
Ga0066388_1053250921	3300005332	Tropical Forest Soil	MRAAACLLAVLVFAAAGTAAAQEKPAIDRMRPGSLNPEPLP
Ga0066388_1059069911	3300005332	Tropical Forest Soil	MRAVVCLLAVFFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0070660_1004080413	3300005339	Corn Rhizosphere	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPLQNPDA
Ga0070668_1019602172	3300005347	Switchgrass Rhizosphere	MVRMAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPEPLPPLRNP
Ga0070704_1004844951	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVVCLLAVLFSAATSSAVAQEKHLIDPMLPGSLNPRPLP
Ga0068857_1010303933	3300005577	Corn Rhizosphere	MRFVLCLLAVLFLAAAGSAVAQEKHLIDPMLPGSLNPKPLPPL
Ga0066905_1004600251	3300005713	Tropical Forest Soil	MRAVVCLLAVLFAAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0066905_1018497602	3300005713	Tropical Forest Soil	MRAVTCLLAALFLAAADSAAAQETHLIDPMLPGSLNPKPLPPLKN
Ga0066903_1007761254	3300005764	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLN
Ga0066903_1011860601	3300005764	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPS
Ga0066903_1024423773	3300005764	Tropical Forest Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNP
Ga0066903_1027220721	3300005764	Tropical Forest Soil	MRAVLCLLAVLFHAAANSAVAQEKHSIDPMLPGTLDPKPL
Ga0066903_1041617241	3300005764	Tropical Forest Soil	MRPVLRLLAVLFLVAAGSAIAQEKHLIDPMLPGSLNPKP
Ga0066903_1049334292	3300005764	Tropical Forest Soil	MRAALCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNP
Ga0066696_110274391	3300006032	Soil	MAAVVCLLAVLFLAAASSAVAQDKHLIDPMLPGSLDPKPLPPLKNPDAPS
Ga0075365_100757305	3300006038	Populus Endosphere	MRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKN
Ga0075028_1010111821	3300006050	Watersheds	MRAAAHLLAVLLLAAVGSAFAREKHLIDPTPPGSLNPE
Ga0075017_1001690911	3300006059	Watersheds	MRAAPRMLAILMLGAAVSATAQEKHLIDPTPPGSLN
Ga0075015_1004031471	3300006102	Watersheds	MRGAACLLLLFLAAAGSAVAQEKNLIDPMLPGSLNPKP
Ga0075018_104414952	3300006172	Watersheds	MRAVACLLTVLFLAGAGSAVAEEKHLIDPMLPGSLNPKPLPPLK
Ga0075021_101696303	3300006354	Watersheds	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPL
Ga0079220_114735561	3300006806	Agricultural Soil	MRAVICLVAVLVLAAVSSAVAQETHLIDPMLPGSLNPKPLPPLKN
Ga0075421_1013515252	3300006845	Populus Rhizosphere	MRAVACLLALLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPS
Ga0075433_106363652	3300006852	Populus Rhizosphere	MRAVVCLLAVLFSAATSSAVAQEKHLLDPMLPGSLDPKPLPPLKNPDAPS
Ga0075433_119311942	3300006852	Populus Rhizosphere	MRQGIHKKLLLMRAAACLLAVLILAAADSAVAQEKHLIDPMHPGSLNPE
Ga0075425_10007041810	3300006854	Populus Rhizosphere	MRQGIHKKLLLMRAAACLLAVLILAAADSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0075429_1006250043	3300006880	Populus Rhizosphere	MRAVVWLLALLFLAAAGTIAAQEKPAIDRIRPGSLNPEPLPPLQNPNAPSTP
Ga0111539_130526662	3300009094	Populus Rhizosphere	MRAVVCLLAILFPAAASSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALS
Ga0075418_119176752	3300009100	Populus Rhizosphere	MRAVACLLAVLFLAAAGSAVAQEKHLIDPMLPGSLNPEPLPPLQNPEAPSTPA
Ga0099792_110909561	3300009143	Vadose Zone Soil	MRAVVCLLTVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDA
Ga0114129_105754231	3300009147	Populus Rhizosphere	MRAVACLLALLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0114129_113508853	3300009147	Populus Rhizosphere	MRAVACLLAVLFLAAAGSAVAQEKHLIDPMHPGSLNPEPLPPLQNPEAPST
Ga0116218_11777751	3300009522	Peatlands Soil	MRAAARLLAVLMLAAASSAIAQEKHLIDPTPPGSLNPEP
Ga0105237_117535131	3300009545	Corn Rhizosphere	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPLQNP
Ga0126380_100148726	3300010043	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLEN
Ga0126382_100130898	3300010047	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLENPD
Ga0126382_115091132	3300010047	Tropical Forest Soil	MRAVVCVLAVLFLAAASSAVAQERHLIDRMLPGSLNPRPLPPLKNPD
Ga0126373_121887551	3300010048	Tropical Forest Soil	MRIAARLLAVLILAGTGSDVAQEKHLMDTTPPGLLD
Ga0127503_101990461	3300010154	Soil	MRAAAHLLAVLLLAAAGSAFAREKHLIDPTPPGSLNPEPLPLLQNP
Ga0126376_100786024	3300010359	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNP
Ga0126376_105047423	3300010359	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPD
Ga0126376_128003951	3300010359	Tropical Forest Soil	MRAAVCLLAVLILAAAASAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0126372_107459522	3300010360	Tropical Forest Soil	MRAVVCLLAALFLAAASSAVAQEKHLIDPMLPGSLDPKPLPPLKNP
Ga0126378_101334241	3300010361	Tropical Forest Soil	MRPAARLIFILILAAAGSAAAQEKQSIDPTPPGSLNPEPLPP
Ga0126378_101476884	3300010361	Tropical Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0126378_107443191	3300010361	Tropical Forest Soil	MRDAARPLAVLILTAAFSAIAQEKHLIDPTPPGSLNPEPLPPLQNPD
Ga0126378_130452781	3300010361	Tropical Forest Soil	VRADVRLFLILSLIFILAIAGSAVAQEKHLIDPTP
Ga0126377_101706624	3300010362	Tropical Forest Soil	MRAVACLLAALSLTAAGSALAQEKHLIDPMLPGSLNPKPLPQLENP
Ga0134128_114786161	3300010373	Terrestrial Soil	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLNRKPLPPL
Ga0126381_1007252173	3300010376	Tropical Forest Soil	MRAVICLLAVVFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPSI
Ga0126381_1010951881	3300010376	Tropical Forest Soil	MHAAARLLAALIFAAAGSVVAQEKHLIDPTLPGSLNPEPLPLL
Ga0126383_129372651	3300010398	Tropical Forest Soil	VQSLMRAVVCLLAVLFLAAATAAVAQQKHVIDPMLPGSLDPKP
Ga0126383_136713611	3300010398	Tropical Forest Soil	MRSAACLLALLILAAPAVAEEKHLIDRTRPGSLNPLPLPPLHNADAPS
Ga0105246_106607461	3300011119	Miscanthus Rhizosphere	MHAAPRLLAVFILAAAGSAVAQEKHLIDPTPPGSLNPE
Ga0153928_10904692	3300012677	Attine Ant Fungus Gardens	MRAAARLVAVFLFALAGPAAAQEKHLIDPTPPGSLNPEPLPPLEHP
Ga0137404_121058982	3300012929	Vadose Zone Soil	MRAVLCLLTVLFLAAASSAVAQEKHLIDPMLPGSLNPKLLPPLKNPDAPSTP
Ga0126375_120817472	3300012948	Tropical Forest Soil	MRAVACLLALLFFADADSAVGQEKNSIDPMLPGSLNPEPLPPLKNPEAPS
Ga0126369_108969711	3300012971	Tropical Forest Soil	LVTRPAARLLAVLILAAASSAVAQEKHLIDPTPPGSLNPEP
Ga0164309_111512191	3300012984	Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLP
Ga0164306_116877391	3300012988	Soil	MRAVVCLLAVLFVAAASSAVAQEKHLIDPMLPGSLNPRPLPPL
Ga0164305_103330183	3300012989	Soil	MRAVVFLLAVLFLAAASSAVAQEKHLIDPMLPGSL
Ga0075343_11270851	3300014317	Natural And Restored Wetlands	MRAVACLLAVFVLAAASSAVAQQKRAIDRMLPGSLDPKPL
Ga0157379_106923791	3300014968	Switchgrass Rhizosphere	MRAIVCLVAVLFLAAASSALAQQKHLIDSMLPGSLNPKPLP
Ga0157376_118168382	3300014969	Miscanthus Rhizosphere	MRVAARVLAIFMVAAAGPALAKKKHLIDPTPPGSLNPIALPPLQ
Ga0132258_126226911	3300015371	Arabidopsis Rhizosphere	MRAAACLLAVFVLVAAGSAAAQEKHLIDPTPPGSLNPKP
Ga0132256_1028953252	3300015372	Arabidopsis Rhizosphere	MRAVAFLLVLHFLAAAGSAVAQEKNLIAPMLPGSLNPKPLPPLKNPEGPS
Ga0182036_112632831	3300016270	Soil	MPAVACLLAVLFLAAASSALAQKKHLIDPMLPGSLNPE
Ga0182032_111272592	3300016357	Soil	MRAAAHLLAFLVLASAGSAVAQEKHLIDPTLPGSL
Ga0182034_110937502	3300016371	Soil	MCAAARLLAILIFVATGPAVAQEKHLIDPTPPGSLNPEP
Ga0182040_108259571	3300016387	Soil	MRAAVCLFAVLFLAGGIFAVAQERHLIDPMRPGSLNPKP
Ga0182037_120915711	3300016404	Soil	MMRAAARLLAAFLVVAAGSAAAQEKHLIDPTPPGSLNPEPLPPL
Ga0182039_117817122	3300016422	Soil	MRAVRCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0182038_106944291	3300016445	Soil	MPAVACLLAVLFLAAASSALAQKKHLIDPMLPGSLN
Ga0187824_102254491	3300017927	Freshwater Sediment	MYTAARLVAVLLFALAGSAAAQEKHLIDPTPPGSLNPEPL
Ga0187781_109238341	3300017972	Tropical Peatland	MRTAARLLAVLILAVAGSAVAQEKHLIDRTRPGSLNPESL
Ga0187777_101350224	3300017974	Tropical Peatland	MHAAACLLAVLILAAAGSAVAQEKHSIDPTPPGSLNPGPLP
Ga0187777_101847773	3300017974	Tropical Peatland	MRAAARLLAVLILAAAGSAAAQEKHLIDPTPPGSLN
Ga0187772_108685542	3300018085	Tropical Peatland	MRTAARLLAALILAVAGSAVAQEKHLIDRTRPGSLNPESL
Ga0210407_109207431	3300020579	Soil	MRAAAHLLAVLLLAAAGSAVARAKHLIDPTPPGSLNPEPP
Ga0210406_103958931	3300021168	Soil	MRAVVCLLAVLFVAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0210406_104169942	3300021168	Soil	MRAAARLLALLMLAAAGSAVAQEKHLIDPTPPGSLNPEPLPRLQNPD
Ga0210405_104960381	3300021171	Soil	MRAVLSLLAILFLAAAGSAIAQEKHLIDPMLPGSLNPKPLPPLTNP
Ga0210389_109517911	3300021404	Soil	MRAVVCLLAVLFLAAASSAVAQEKHVLDPMLPGSL
Ga0210394_112023842	3300021420	Soil	MRAVVCLLVVVFLAAASSAVAQEKHLIDPMLPGSLDPQ
Ga0210402_106089322	3300021478	Soil	MRAAVRLLAVLILAAAGSAVAQEKHLIDPTPPGSLN
Ga0126371_103097954	3300021560	Tropical Forest Soil	MRAVACLLAVLFLAAAGSSVAQEKHSIDPMLPGTLDPKPLPPL
Ga0126371_106358853	3300021560	Tropical Forest Soil	MRSAACLLALLILAAPAVAEEKHLIDRTRPGSLNPL
Ga0222622_108853262	3300022756	Groundwater Sediment	MRAAARLLAVLILAAAGSALAQEKHLIDPTPPGSLN
Ga0207642_103240961	3300025899	Miscanthus Rhizosphere	MRAVVCLLAVLFLAAASSAVVAQEKHLIDPMLPGSLNPKPLPPLKNPDARS
Ga0207693_101107701	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0207662_108493291	3300025918	Switchgrass Rhizosphere	MPAVLCLLAVLFLAAASSVVVAQEKHVIDPMLPGSLD
Ga0207709_108841861	3300025935	Miscanthus Rhizosphere	MRVAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPKALPPLQNPD
Ga0207711_112842662	3300025941	Switchgrass Rhizosphere	MRVAARVLAIFMVAAAGPALAQKKHLIDPTPPGSLNPIALPPLQNPD
Ga0207641_117078981	3300026088	Switchgrass Rhizosphere	MPAVLCLLAVLFLAAASSVVVAQEKHVIDPMLSGSLDPKPLPPLKNPD
Ga0257147_10200822	3300026475	Soil	MRAPTRLLAVLILTAVGSAVAQEKHLIDPTPPGSLNPKPLPPLQN
Ga0207722_10127761	3300027003	Tropical Forest Soil	MRTAVRLLAVLLLAAAGSAGAQEKHMIDPTPPGSLNPEPLPPLENP
Ga0208042_10630352	3300027568	Peatlands Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLDP
Ga0208324_10995252	3300027604	Peatlands Soil	MRAAAHLLAVLLLAAAGSAVAREKHLIDPAPPGFLNPEPLPPLQNPD
Ga0209178_11600141	3300027725	Agricultural Soil	MRAAARLLTVLILAAAGFAVAQEKHSIDPTPPGSLNLEPLPPL
Ga0208989_100128411	3300027738	Forest Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLAGSLN
Ga0209481_103579581	3300027880	Populus Rhizosphere	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNP
Ga0209526_104231012	3300028047	Forest Soil	MRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNP
Ga0307302_100404865	3300028814	Soil	MRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSVNPRPCR
Ga0311355_110631561	3300030580	Palsa	MRVVVCLVAILFLSAASSAVAQEKHLIDPMLPGSLDPEPLPPLKNPDAPS
Ga0075386_116305391	3300030916	Soil	MRAPTRLLAVLILAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQNP
Ga0308193_10268592	3300031096	Soil	LLMRAVVCLLAVLFPAAASSAVAQEKHLIDPMLPGSLNP
Ga0170820_144864521	3300031446	Forest Soil	MRAVVCLLAVLSLAAASSAVAQEKHGIDPMLPGSLNPK
Ga0170820_165866151	3300031446	Forest Soil	MRATVRLLAVLILAAAGSAVAQEKHLIDPTPPGSLNPEP
Ga0170818_1134908852	3300031474	Forest Soil	MRAVLYLLAVFFLAAAGSAIAQEKHLIDPMLPGSLNPEPL
Ga0318516_108077721	3300031543	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPK
Ga0318515_101089221	3300031572	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQ
Ga0310915_103740231	3300031573	Soil	MRTVVCLLAILFLAAASSALAQQKHLLDPMLPGSLDPKPLPPLKNP
Ga0306917_100308991	3300031719	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPAAPSTP
Ga0306917_110670521	3300031719	Soil	MRTVVCLLAVLFLAAASSAVAQQKHLIDPMLPGSL
Ga0307469_117502562	3300031720	Hardwood Forest Soil	MRAVVCLLAVLFVAAAGSAVAQEKHLIDPMLSGSLNPK
Ga0306918_103166731	3300031744	Soil	MMRAAARLLAAFLVVAAGSAAAQEKHLIDPTPPGSL
Ga0318502_110216832	3300031747	Soil	LLMRAVVCLLAVLFLAAASSAVAQEKHLIDPMLPG
Ga0318492_104426362	3300031748	Soil	MRTAARLLAVLLLAAAGSAGAQEKHMIDPTPPGSLN
Ga0318494_103605451	3300031751	Soil	MRAVAPLLAVFLLAAGSAGAQEKHLTDPTPPGSLNPEPLPALQHPDA
Ga0318535_104610692	3300031764	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNP
Ga0318509_102593551	3300031768	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLN
Ga0318566_106571771	3300031779	Soil	MRAVLCLLVVLFLAATGSAIAQEKHSIDPMLPGSLNPKPLPPLKN
Ga0318552_102314011	3300031782	Soil	MRAVVCLLAVLFLAVASSAVAQEKHLIDPMLPGSLNPKPLPPLK
Ga0318552_102581371	3300031782	Soil	LLVRAVRCLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNP
Ga0318550_102842041	3300031797	Soil	MHAAARFIAIALIALAGSAAAQQKPEIDPTPPGSLNPEPLPLLEYRDAK
Ga0318568_105276961	3300031819	Soil	MRAVLCLLAALFLAAANSAVAQEKHLIDPMLPGSLNPKPLPPLKN
Ga0310917_111128971	3300031833	Soil	MRAAARLLAVLMLVTTGSAAAQEKHLIDRTRPGSLDPKPLPPLQNPDAP
Ga0310907_104717612	3300031847	Soil	MRAAARLLAVVILAAAGSAVAQEKHLIDPTPPGSLNPKPLPPLQN
Ga0306919_112191652	3300031879	Soil	MCAVVCLVAGLFLTAASSAIAQEKHLIDPMLPGSLNPKPLPPLKNPDAA
Ga0318551_100891201	3300031896	Soil	MRAVVCLVAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPS
Ga0306923_112608711	3300031910	Soil	MRAVICLLAVLFLAAASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPSI
Ga0310912_100511045	3300031941	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSL
Ga0310910_108280332	3300031946	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNPDA
Ga0318531_103984451	3300031981	Soil	MRAVICLLAVLFPAIASSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAQSIPAK
Ga0310903_103187142	3300032000	Soil	MRAVVCLLAVLFSAATSSAVAQEKHLIDPMLPGSLNPRPLPPLKNPDALST
Ga0318569_105692551	3300032010	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPE
Ga0318507_104390581	3300032025	Soil	MRAVVCLLAVLFLAVASSAVAKEKHLIDPMLPGSLNPKPLPPLKNPA
Ga0318556_101317042	3300032043	Soil	MRAAACLLTVFVFAAAGSAVAQEKHLIDPTPPGSLNPEPLPP
Ga0318533_103357442	3300032059	Soil	MRAAPCLLAVLILAAAGSAVAQEKHLIDPTPPGSLN
Ga0318505_100038951	3300032060	Soil	MRAAARLFAVLVLAAVGSAVAQEKHLIDPTPPGSLNPEPLPPLQN
Ga0306924_124163402	3300032076	Soil	MRAVLCLLAVLFLAAANSAVAQEKHLIDPMLPGSLNPKPLPP
Ga0306920_1008721091	3300032261	Soil	MRAAARLLAVLMLVAAGSAVAQEKHLIDRTRPGSLNPEPLPPLQNPDAAAD
Ga0306920_1034239341	3300032261	Soil	MRTVVCLLAVLFLSAASSAVAQQKHLIDPMLPGSLTPKPLPSLKIPDAPATPAQE
Ga0335084_108007473	3300033004	Soil	MRAAPCLLAVLLLAAAGSAVAQEKHLIDPILPGSLNPK
Ga0310914_104881931	3300033289	Soil	MRTAARLLAALLLAAAGSAGAQEKHMIDPTPPGSLNP
Ga0310914_109705641	3300033289	Soil	MHAAARFIAIALIALAGSAAAQQKPEIDPTPPGSLNPEPLPLLE
Ga0318519_107973961	3300033290	Soil	MRAAARLLAILILAAASSAVAQQKHLIDPTPRGSLNPVPLP
Ga0326726_104682213	3300033433	Peat Soil	MRAVACLLAVLFLAGSAVAQEKHLIDPMLPGSLNPKPLPPLKNPDAPST

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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