Metagenome / Metatranscriptome Family F045341

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045341
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	64 residues
Representative Sequence	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDQINEAVERMVDADRTEH
Number of Associated Samples	115
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.78 %
% of genes near scaffold ends (potentially truncated)	41.18 %
% of genes from short scaffolds (< 2000 bps)	87.58 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.797 % of family members)
Environment Ontology (ENVO)	Unclassified (30.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.405 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.74% β-sheet: 0.00% Coil/Unstructured: 36.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF09339	HTH_IclR	4.58
PF13545	HTH_Crp_2	1.96
PF04392	ABC_sub_bind	1.96
PF00534	Glycos_transf_1	1.96
PF13340	DUF4096	1.31
PF09926	DUF2158	1.31
PF00011	HSP20	0.65
PF00496	SBP_bac_5	0.65
PF07508	Recombinase	0.65
PF12802	MarR_2	0.65
PF01527	HTH_Tnp_1	0.65
PF00872	Transposase_mut	0.65
PF00589	Phage_integrase	0.65
PF05036	SPOR	0.65
PF04542	Sigma70_r2	0.65
PF09994	DUF2235	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.96
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.65
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.65
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.65
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	32.68 %
Viruses	superkingdom	All Organisms → Viruses	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.65 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.31 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.07 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.31 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.65 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.31 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.65 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.65 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.58 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.31 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	0.65 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.31 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.31 %
unclassified Defluviicoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.31 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.31 %
Defluviicoccus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	0.65 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.65 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.65 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.65 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_12672392	Not Available	1051	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1038329	Not Available	744	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10052688	Not Available	1054	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1058089	Not Available	687	Open in IMG/M
3300001431\|F14TB_100621795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300001661\|JGI12053J15887_10018493	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3885	Open in IMG/M
3300001867\|JGI12627J18819_10248876	Not Available	715	Open in IMG/M
3300002906\|JGI25614J43888_10021526	Not Available	2056	Open in IMG/M
3300002906\|JGI25614J43888_10054809	Not Available	1185	Open in IMG/M
3300002906\|JGI25614J43888_10106587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300002908\|JGI25382J43887_10290501	Not Available	723	Open in IMG/M
3300004633\|Ga0066395_10058209	Not Available	1737	Open in IMG/M
3300004633\|Ga0066395_10069602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1616	Open in IMG/M
3300004633\|Ga0066395_10532510	Not Available	681	Open in IMG/M
3300004633\|Ga0066395_10630899	Not Available	630	Open in IMG/M
3300004633\|Ga0066395_10717913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	594	Open in IMG/M
3300005165\|Ga0066869_10109628	Not Available	561	Open in IMG/M
3300005332\|Ga0066388_101181834	Not Available	1305	Open in IMG/M
3300005332\|Ga0066388_103651251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	785	Open in IMG/M
3300005332\|Ga0066388_106556845	Not Available	587	Open in IMG/M
3300005363\|Ga0008090_10079715	Not Available	725	Open in IMG/M
3300005434\|Ga0070709_11762090	Not Available	506	Open in IMG/M
3300005713\|Ga0066905_100086281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2082	Open in IMG/M
3300005764\|Ga0066903_100229556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2828	Open in IMG/M
3300005764\|Ga0066903_100729588	Not Available	1754	Open in IMG/M
3300005764\|Ga0066903_101083005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1475	Open in IMG/M
3300005764\|Ga0066903_105660426	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_107897971	Not Available	546	Open in IMG/M
3300006172\|Ga0075018_10250380	Not Available	858	Open in IMG/M
3300006755\|Ga0079222_10192517	Not Available	1216	Open in IMG/M
3300006755\|Ga0079222_12130152	Not Available	555	Open in IMG/M
3300006797\|Ga0066659_11060759	Not Available	677	Open in IMG/M
3300006800\|Ga0066660_10044453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2852	Open in IMG/M
3300006804\|Ga0079221_10538009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300006852\|Ga0075433_10665722	Not Available	912	Open in IMG/M
3300006903\|Ga0075426_10830686	Not Available	696	Open in IMG/M
3300007255\|Ga0099791_10054841	All Organisms → Viruses → Predicted Viral	1788	Open in IMG/M
3300007265\|Ga0099794_10315502	Not Available	810	Open in IMG/M
3300007265\|Ga0099794_10420778	Not Available	699	Open in IMG/M
3300007788\|Ga0099795_10101041	Not Available	1131	Open in IMG/M
3300009088\|Ga0099830_10120150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1988	Open in IMG/M
3300009100\|Ga0075418_13144974	Not Available	503	Open in IMG/M
3300009147\|Ga0114129_10184388	All Organisms → cellular organisms → Bacteria → Proteobacteria	2837	Open in IMG/M
3300009147\|Ga0114129_11059847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300009147\|Ga0114129_11945323	Not Available	712	Open in IMG/M
3300009162\|Ga0075423_10249323	Not Available	1860	Open in IMG/M
3300009162\|Ga0075423_12445903	Not Available	570	Open in IMG/M
3300010041\|Ga0126312_10551040	Not Available	827	Open in IMG/M
3300010043\|Ga0126380_11282960	Not Available	636	Open in IMG/M
3300010046\|Ga0126384_12024150	Not Available	551	Open in IMG/M
3300010358\|Ga0126370_11994505	Not Available	567	Open in IMG/M
3300010359\|Ga0126376_11837693	Not Available	644	Open in IMG/M
3300010360\|Ga0126372_11691724	Not Available	674	Open in IMG/M
3300010361\|Ga0126378_11523263	Not Available	758	Open in IMG/M
3300010366\|Ga0126379_10045910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	3560	Open in IMG/M
3300010366\|Ga0126379_10375068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1462	Open in IMG/M
3300010366\|Ga0126379_12319101	Not Available	637	Open in IMG/M
3300010366\|Ga0126379_12931643	Not Available	571	Open in IMG/M
3300010999\|Ga0138505_100031368	Not Available	725	Open in IMG/M
3300012096\|Ga0137389_10382360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1201	Open in IMG/M
3300012180\|Ga0153974_1071638	Not Available	770	Open in IMG/M
3300012180\|Ga0153974_1120210	Not Available	605	Open in IMG/M
3300012202\|Ga0137363_10011888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5589	Open in IMG/M
3300012202\|Ga0137363_10074034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2516	Open in IMG/M
3300012202\|Ga0137363_10756368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	823	Open in IMG/M
3300012205\|Ga0137362_10613690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	937	Open in IMG/M
3300012205\|Ga0137362_11030379	Not Available	700	Open in IMG/M
3300012361\|Ga0137360_10355542	Not Available	1227	Open in IMG/M
3300012362\|Ga0137361_10107296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	2439	Open in IMG/M
3300012362\|Ga0137361_10286764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1505	Open in IMG/M
3300012362\|Ga0137361_10479318	Not Available	1143	Open in IMG/M
3300012363\|Ga0137390_11048402	Not Available	766	Open in IMG/M
3300012582\|Ga0137358_11037655	Not Available	528	Open in IMG/M
3300012917\|Ga0137395_11239254	Not Available	519	Open in IMG/M
3300012923\|Ga0137359_10069452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3079	Open in IMG/M
3300012923\|Ga0137359_10433055	Not Available	1164	Open in IMG/M
3300012927\|Ga0137416_10960829	Not Available	762	Open in IMG/M
3300012930\|Ga0137407_11392107	Not Available	667	Open in IMG/M
3300012948\|Ga0126375_11323029	Not Available	607	Open in IMG/M
3300012957\|Ga0164303_10225083	Not Available	1057	Open in IMG/M
3300012989\|Ga0164305_10446540	Not Available	1003	Open in IMG/M
3300015371\|Ga0132258_11530184	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300015372\|Ga0132256_102158264	Not Available	662	Open in IMG/M
3300015373\|Ga0132257_103758430	Not Available	552	Open in IMG/M
3300015374\|Ga0132255_101030517	Not Available	1235	Open in IMG/M
3300016294\|Ga0182041_11120070	Not Available	715	Open in IMG/M
3300016319\|Ga0182033_11919539	Not Available	538	Open in IMG/M
3300016404\|Ga0182037_10104777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2045	Open in IMG/M
3300020580\|Ga0210403_10285370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1353	Open in IMG/M
3300021432\|Ga0210384_11694653	Not Available	538	Open in IMG/M
3300021560\|Ga0126371_10181870	Not Available	2187	Open in IMG/M
3300021560\|Ga0126371_11835232	Not Available	727	Open in IMG/M
3300025915\|Ga0207693_10648450	Not Available	820	Open in IMG/M
3300025939\|Ga0207665_11214025	Not Available	602	Open in IMG/M
3300026304\|Ga0209240_1004254	Not Available	5401	Open in IMG/M
3300026304\|Ga0209240_1013958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3060	Open in IMG/M
3300026304\|Ga0209240_1067393	Not Available	1335	Open in IMG/M
3300026319\|Ga0209647_1078574	Not Available	1639	Open in IMG/M
3300026319\|Ga0209647_1207588	Not Available	674	Open in IMG/M
3300026551\|Ga0209648_10366523	Not Available	977	Open in IMG/M
3300027480\|Ga0208993_1034428	Not Available	903	Open in IMG/M
3300027663\|Ga0208990_1014997	Not Available	2569	Open in IMG/M
3300027727\|Ga0209328_10059183	Not Available	1174	Open in IMG/M
3300027874\|Ga0209465_10026957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	2686	Open in IMG/M
3300027909\|Ga0209382_10507042	Not Available	1328	Open in IMG/M
3300028536\|Ga0137415_10902684	Not Available	694	Open in IMG/M
3300028878\|Ga0307278_10299315	Not Available	711	Open in IMG/M
3300028878\|Ga0307278_10383511	Not Available	618	Open in IMG/M
3300029636\|Ga0222749_10209332	Not Available	978	Open in IMG/M
3300031421\|Ga0308194_10147170	Not Available	723	Open in IMG/M
3300031543\|Ga0318516_10442448	Not Available	747	Open in IMG/M
3300031543\|Ga0318516_10589411	Not Available	635	Open in IMG/M
3300031561\|Ga0318528_10093836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1568	Open in IMG/M
3300031561\|Ga0318528_10796293	Not Available	505	Open in IMG/M
3300031573\|Ga0310915_10115868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1825	Open in IMG/M
3300031640\|Ga0318555_10098697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1537	Open in IMG/M
3300031668\|Ga0318542_10256949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300031679\|Ga0318561_10563278	Not Available	627	Open in IMG/M
3300031680\|Ga0318574_10651113	Not Available	617	Open in IMG/M
3300031713\|Ga0318496_10676209	Not Available	569	Open in IMG/M
3300031719\|Ga0306917_10312552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1215	Open in IMG/M
3300031719\|Ga0306917_11001292	Not Available	652	Open in IMG/M
3300031723\|Ga0318493_10225757	Not Available	995	Open in IMG/M
3300031723\|Ga0318493_10511165	Not Available	664	Open in IMG/M
3300031744\|Ga0306918_10231058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1405	Open in IMG/M
3300031744\|Ga0306918_10425224	Not Available	1036	Open in IMG/M
3300031751\|Ga0318494_10726394	Not Available	581	Open in IMG/M
3300031763\|Ga0318537_10255118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300031764\|Ga0318535_10083120	Not Available	1385	Open in IMG/M
3300031765\|Ga0318554_10139501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1374	Open in IMG/M
3300031768\|Ga0318509_10146346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1301	Open in IMG/M
3300031771\|Ga0318546_10706144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031782\|Ga0318552_10126108	Not Available	1277	Open in IMG/M
3300031794\|Ga0318503_10026242	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300031805\|Ga0318497_10685696	Not Available	574	Open in IMG/M
3300031833\|Ga0310917_11100052	Not Available	530	Open in IMG/M
3300031845\|Ga0318511_10242723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300031859\|Ga0318527_10484570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300031894\|Ga0318522_10312470	Not Available	595	Open in IMG/M
3300031896\|Ga0318551_10321603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300031946\|Ga0310910_10065925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2598	Open in IMG/M
3300031947\|Ga0310909_10091116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2434	Open in IMG/M
3300031959\|Ga0318530_10456274	Not Available	530	Open in IMG/M
3300032010\|Ga0318569_10079101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1463	Open in IMG/M
3300032041\|Ga0318549_10182788	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300032051\|Ga0318532_10247910	Not Available	632	Open in IMG/M
3300032055\|Ga0318575_10148943	Not Available	1162	Open in IMG/M
3300032067\|Ga0318524_10361755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300032094\|Ga0318540_10114511	Not Available	1276	Open in IMG/M
3300032094\|Ga0318540_10445437	Not Available	626	Open in IMG/M
3300032261\|Ga0306920_102868048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300033289\|Ga0310914_11173167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300033290\|Ga0318519_10127084	Not Available	1402	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.20%
Host-Associated	Host-Associated	9.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.54%
Plants	Host-Associated → Plants	8.50%
Fungi	Host-Associated → Fungi	1.31%
Aquatic	Environmental → Aquatic	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Mycelium	Host-Associated → Fungi → Mycelium	1.31%
Sediment	Environmental → Aquatic → Sediment	0.65%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.55%
Loam	Environmental → Terrestrial → Soil → Loam	16.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.99%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.31%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.31%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.65%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_126723921	3300000550	Soil	MSGSHKTDDLVNDMLADMCGLIVKTIALIPPERDDDRLSACAFVLDQINEAVERIVNADRTEH*
AF_2010_repII_A01DRAFT_10383292	3300000580	Forest Soil	MSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH*
AF_2010_repII_A1DRAFT_100526884	3300000597	Forest Soil	MSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH*
AF_2010_repII_A100DRAFT_10580892	3300000655	Forest Soil	MSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH*
F14TB_1006217952	3300001431	Soil	MSGSXXXDDLVNDMLADMCGLIVKTIALIPPERDDDRLSACAFVLDQINKAVEHIVNADRTEQERRVRRIPAARRSLG*
JGI12053J15887_100184933	3300001661	Forest Soil	MSGSHNKDDLVKDMLTMVDDMLADMCGLIVKTIALIPPERDDERLSACAFVLEVINEAVERIVNAERTEH*
JGI12627J18819_102488762	3300001867	Forest Soil	MSDSDREKLVNDMLADMCGLIGKTITLIPPEHAEERLSACAFLLDQINNTIKRTLTADKTEH*
JGI25614J43888_100215262	3300002906	Grasslands Soil	MSDSDLEVGPMSYSDKEQLVNDMLADMCDLIGKALALIPPEYDKERLSACAFVLDQINETVNRMVSVDRTEH*
JGI25614J43888_100548091	3300002906	Grasslands Soil	MIGGHNKDDLVNDMLADMCGLIAKTIALIPPEHDGERLAACAFVLDQINEAVQRMLNADRTQH*
JGI25614J43888_101065871	3300002906	Grasslands Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDVINEAVARVVNADRTEH*
JGI25382J43887_102905013	3300002908	Grasslands Soil	APRQFDDILADMCGLIAKTIALIPPEHDEERLSACAFVLDQINEAVQRVLDADRIEH*
Ga0066395_100582092	3300004633	Tropical Forest Soil	MSGSHNTDDLVNDMLADMCGLIVKTIALIPPERDEERLSACAFVLDQINEAVERMVNPDRTEH*
Ga0066395_100696023	3300004633	Tropical Forest Soil	MSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH*
Ga0066395_105325101	3300004633	Tropical Forest Soil	MSDSDKEQLLYDMLAEMCGLIVKTIALIPPEHDDERLAACAFVLDEINEAVKRMVTAHRTEH*
Ga0066395_106308992	3300004633	Tropical Forest Soil	LVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRIEH*
Ga0066395_107179131	3300004633	Tropical Forest Soil	LVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINEAVERMVGTDRTEH*
Ga0066869_101096281	3300005165	Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRIEH*
Ga0066388_1011818342	3300005332	Tropical Forest Soil	MTDSDKEQLFYDMLANMLADMCGLIGKTIALIPPEHDDERLAACALVLDQINEAVKRMGTAHGTEH*
Ga0066388_1036512512	3300005332	Tropical Forest Soil	VPPSYSRIGVGPMSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH*
Ga0066388_1065568452	3300005332	Tropical Forest Soil	LEIGRTSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH*
Ga0008090_100797151	3300005363	Tropical Rainforest Soil	MSDSDLEVGPMSDSDNEQLLNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINEAVERMVRTDRTEH*
Ga0070709_117620901	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SEIGPMSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRTAH*
Ga0066905_1000862811	3300005713	Tropical Forest Soil	MSDSDKGQLINDMLADMCGLIVKTIALIPPEHDEARLSACAFVLDQINEAVERMVGTDRTEH*
Ga0066903_1002295567	3300005764	Tropical Forest Soil	MSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH*
Ga0066903_1007295883	3300005764	Tropical Forest Soil	MSDSDKEQLVNDMLADMCGLIGKTLALIPPEYDKERLSACAFVLDQINEVVKRMVSADRTEH*
Ga0066903_1010830054	3300005764	Tropical Forest Soil	VNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRIEH*
Ga0066903_1056604262	3300005764	Tropical Forest Soil	MSDSGLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPGHDKERLSACAFVLDQINNAIKRTLSADRTEH*
Ga0066903_1078979711	3300005764	Tropical Forest Soil	ALEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDNERLSACAFVLDQINNAIKSTLSADRTEH*
Ga0075018_102503801	3300006172	Watersheds	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDEERLSACAFVIDQINEAVERMVNPDRTAH*
Ga0079222_101925173	3300006755	Agricultural Soil	MSGSHNKDDLVDDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRMVNPDRTEH*
Ga0079222_121301521	3300006755	Agricultural Soil	DLVNDILADMCGLIAKTIALIPPEQDDERLSACAFVLDQINEAVQRVLNADQTEH*
Ga0066659_110607591	3300006797	Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERRVNAD
Ga0066660_100444535	3300006800	Soil	QLVNDMLADMCGLIGKTLALIPPGYDKERLSACAFVLDQINETVNRIVSADRTEH*
Ga0079221_105380091	3300006804	Agricultural Soil	MIGSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRVLNADQTEH*
Ga0075433_106657221	3300006852	Populus Rhizosphere	MSSSHNKDDLVNDILADMCALIAKTIALIPPEHDDERLSACAFVIDQINEAVER
Ga0075426_108306862	3300006903	Populus Rhizosphere	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMV
Ga0099791_100548412	3300007255	Vadose Zone Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDGERLAACAFVLDQINEAVQRMLNADRTQH*
Ga0099794_103155021	3300007265	Vadose Zone Soil	MSYSDKEQLVNDMLADMCDLIGKALALIPPEYDKERLSACAFVLDQINETVNRMVSVDRTEH*
Ga0099794_104207782	3300007265	Vadose Zone Soil	MSGSHNKDALINDMLADMCGLIAKTIALIPPEHDDERLSACAFVLDVINEAVARVVNADRTEH*
Ga0099795_101010412	3300007788	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINEAVERMVNPDRIEH*
Ga0099830_101201501	3300009088	Vadose Zone Soil	MIGSDNNDLVSDLLADMCDLIVKTIALIPPERDGERLHACAFVLEEINDSVERMVNAYRTEH*
Ga0075418_131449741	3300009100	Populus Rhizosphere	MSGSHKTDDLVNDMLADMCGLIVKTIALIPPERDDDRLSACAFVLDQINEAVERIVNVTDQQR
Ga0114129_101843884	3300009147	Populus Rhizosphere	MSGSHKTDDLVNDMLADMCGLIVKTIALIPPERDDERLSACAFVLDQINEAVERIVNADRTEH*
Ga0114129_110598472	3300009147	Populus Rhizosphere	MSNSHNNDDLVNEMLADMCGLIVKTIALIPPERDDERLSACAFVLDAVNEAVERMVNADRTEH*
Ga0114129_119453231	3300009147	Populus Rhizosphere	MSSSHNKDDLVNDILADMCALIAKTIALIPPEHDEERLSACAFVLDQINETVERMVNADRTEH*
Ga0075423_102493232	3300009162	Populus Rhizosphere	MSSSHNKDDLVNDILADMCALIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNADQTEH*
Ga0075423_124459031	3300009162	Populus Rhizosphere	MSGSHNKDDLVDDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRTVNPDRTEH*
Ga0126312_105510401	3300010041	Serpentine Soil	MSGSHNTDDLVNGMLADMCGLIVKTIALMPPDREDDRLSACVFVLDQINEAVNRVVNANRTEH*
Ga0126380_112829601	3300010043	Tropical Forest Soil	MSDSDRGQLINDMLADMCGLIVKTIALIPPEHDEARLSACAFVLDQINEAVERMVGTDRTEH*
Ga0126384_120241501	3300010046	Tropical Forest Soil	MSDSDNAQLVNDMLADMCGLIGKTLALIPPEHDKERLLACAFVLDQINNAIKRTLSADRTEH*
Ga0126370_119945051	3300010358	Tropical Forest Soil	SDKEQLFYDMLANMLADMCGLIGKTIALIPPEHDDERLAACAFVLDEINEAVKRMVTAHRTEH*
Ga0126376_118376932	3300010359	Tropical Forest Soil	GPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH*
Ga0126372_116917242	3300010360	Tropical Forest Soil	LEIGRTSDSDKEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH*
Ga0126378_115232632	3300010361	Tropical Forest Soil	MSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH*
Ga0126379_100459105	3300010366	Tropical Forest Soil	MTDSDKEQLFYDMLANMLADMCGLIGKTIALIPPEHDDERLAACAFVLDQINEPVKRMVTADRTEH*
Ga0126379_103750682	3300010366	Tropical Forest Soil	MSDCDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH*
Ga0126379_123191011	3300010366	Tropical Forest Soil	QLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH*
Ga0126379_129316431	3300010366	Tropical Forest Soil	QLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINEAVERMVGTDRTEH*
Ga0138505_1000313681	3300010999	Soil	MSGSHKTDDLVNDMLADMCGLIVKTIALIPPDRDDDRLSACAFVLDQINEAVERIVNADRTEH*
Ga0137389_103823601	3300012096	Vadose Zone Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDVINEAVARIVKDNRTEH*
Ga0153974_10716382	3300012180	Attine Ant Fungus Gardens	MIGSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRMVNPDRTEH*
Ga0153974_11202101	3300012180	Attine Ant Fungus Gardens	MIGGHNKDDLVSDLLTDLCGLIVKTIALIPPERDDERLSACAFVLDAVNEAVERMVNADRTEH*
Ga0137363_100118884	3300012202	Vadose Zone Soil	MSDSDKEQLVNDMLADMCGLIDKTLALIPPEYDKERLSACAFVLDQINETVNRIVSADRTEH*
Ga0137363_100740344	3300012202	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVTADRIEH*
Ga0137363_107563681	3300012202	Vadose Zone Soil	MSYSDKEQLVNDMLADMCDLIGKALALIPPEYDKERLSACAFVLDQINETVNR
Ga0137362_106136902	3300012205	Vadose Zone Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDQINEAVERMVDADRTEH*
Ga0137362_110303792	3300012205	Vadose Zone Soil	MGGTGAPRQFDDILADMCGLIAKTIALIPPEHDEERLSACAFVLDQINEAVQRVLNADQTEH*
Ga0137360_103555422	3300012361	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDEERLSACAFVIDQINEAVERMVNPDWTEH*
Ga0137361_101072963	3300012362	Vadose Zone Soil	MSDSDKEQLVNDMLADMCGLIDKTLALIPPEYDKERLPACAFVLDQINETVNRIVSADRTEH*
Ga0137361_102867643	3300012362	Vadose Zone Soil	MSGSHNKDALINMLGDMCGLIVKTIVLIPPEHDDERLSACAFVLDVINEAVARIVKDNRTEH*
Ga0137361_104793182	3300012362	Vadose Zone Soil	MIGSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINEAVQRVLNADQTEH*
Ga0137390_110484022	3300012363	Vadose Zone Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDVINEDVARVVNADRTEH*
Ga0137358_110376551	3300012582	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDEERLSACAFVIDQINEAVERMVNPDRIEH*
Ga0137395_112392541	3300012917	Vadose Zone Soil	KDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINEAVERMVDADRTEH*
Ga0137359_100694521	3300012923	Vadose Zone Soil	MSSSHNKDALINMLGDMCGLIVKTIVLIPPEHDDERLSACAFVLDVINEAVARIVKDNRTEH*
Ga0137359_104330551	3300012923	Vadose Zone Soil	MIGSDNKDALINDMLTDMGGLIVKTIALIPPERDGERLHACAFVLEKINEAVERMVTADRTEH*
Ga0137416_109608291	3300012927	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDVINEAVARVVNADRTEH*
Ga0137407_113921071	3300012930	Vadose Zone Soil	MLADMCGLIDKTLALIPPEYDKERLPACAFVLDQINETVNRIVSADRTEH*
Ga0126375_113230292	3300012948	Tropical Forest Soil	MSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLLACAFVLDQINNAIKRTLSADRTEH*
Ga0164303_102250833	3300012957	Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNADRIEH*
Ga0164305_104465403	3300012989	Soil	VNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRIEH*
Ga0132258_115301841	3300015371	Arabidopsis Rhizosphere	MTDSDKEQLFYDMLADMCGLIGKTIALIPEHDDERLSACAFVLDQINETVERMVNPDRTAH*
Ga0132256_1021582641	3300015372	Arabidopsis Rhizosphere	MSGSHNKDDLVNDILADMCGLIAKTIVLIPPEHDDERLSACAFVLDQINETVERMVNPDRTAH*
Ga0132257_1037584302	3300015373	Arabidopsis Rhizosphere	ADLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRTVNPDRTEH*
Ga0132255_1010305172	3300015374	Arabidopsis Rhizosphere	MIGSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDQINETVQRTVNPDRTEH*
Ga0182041_111200702	3300016294	Soil	MSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTE
Ga0182033_119195391	3300016319	Soil	VSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0182037_101047775	3300016404	Soil	MSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVS
Ga0210403_102853702	3300020580	Soil	FTRASEIGPMSSSHNKDDLVINDILAEMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRTAH
Ga0210384_116946531	3300021432	Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRIEH
Ga0126371_101818704	3300021560	Tropical Forest Soil	MSGSHNTDDLVNDMLADMCGLIVKTIALIPPERDEERLSACAFVLDQINEAVERMVNPDRTEH
Ga0126371_118352322	3300021560	Tropical Forest Soil	MSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0207693_106484501	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDEERLSACAFVIDQINEAVERMVNPDRTAH
Ga0207665_112140252	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDEERLSACAFVIDQINEAVERMVNPDRIEH
Ga0209240_10042548	3300026304	Grasslands Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDVINEAVARVVNADRTEH
Ga0209240_10139581	3300026304	Grasslands Soil	MSDSDLEVGPMSYSDKEQLVNDMLADMCDLIGKALALIPPEYDKERLSACAFVLDQINETVNRMVSVDRTEH
Ga0209240_10673932	3300026304	Grasslands Soil	MSGSHNKDALINMLGDMCGLIVKTIVLIPPEHDDERLSACAFVLDVINEAVARIVKDNRTEH
Ga0209647_10785743	3300026319	Grasslands Soil	MIGGHNKDDLVNDMLADMCGLIAKTIALIPPEHDGERLAACAFVLDQINEAVQRMLNADRTQH
Ga0209647_12075882	3300026319	Grasslands Soil	MIGSDNNDLVSDLLADMCDLIVKTIALIPPERDGERLHACAFVLEEINDSVERMVNAYRTEH
Ga0209648_103665232	3300026551	Grasslands Soil	MIGGHNKDDLVNDMLADMCGLIAKTIALIPPEHDGERLATCAFVLDQINEAVQRMLNAD
Ga0208993_10344282	3300027480	Forest Soil	MSGSHNKDDLVKDMLTMVDDMLADMCGLIVKTIALIPPERDDERLSACAFVLEVINEAVERIVNAERTEH
Ga0208990_10149971	3300027663	Forest Soil	MSGSHNKDDLVKDMLTMVDDMLADMCGLIVKTIALIPPERDDERLSACAFVLDQINEAVERMVNDDRTEH
Ga0209328_100591832	3300027727	Forest Soil	MSSSHNKDDLVINDILAEMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNPDRTAH
Ga0209465_100269573	3300027874	Tropical Forest Soil	MSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0209382_105070422	3300027909	Populus Rhizosphere	MSGSHKTDDLVNDMLADMCGLIVKTIALIPPERDDDRLSACAFVLDQINEAVERIVNADRTEH
Ga0137415_109026842	3300028536	Vadose Zone Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVLDVINEAVARVVNADRTEH
Ga0307278_102993152	3300028878	Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVVDVINEAVAHMVNADRTEH
Ga0307278_103835112	3300028878	Soil	MSGSHNKDALINDMLADMCGLIVKTIALISPEHDDERLSACAFVVDVINEAVAHMVNADRTEH
Ga0222749_102093321	3300029636	Soil	MSSSHNKDDLVNDILADMCGLIAKTIALIPPEHDDERLSACAFVIDQINEAVERMVNADRTQH
Ga0308194_101471701	3300031421	Soil	MSGSHNKDALINDMLADMCGLIVKTIALIPPEHDDERLSACAFVLDQINEAVERMVNDDRTEH
Ga0318516_104424482	3300031543	Soil	MSDSDLEVGPMSDSDNKQLVNDILADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318516_105894112	3300031543	Soil	MSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH
Ga0318528_100938361	3300031561	Soil	MSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318528_107962931	3300031561	Soil	PHLTRALEVGPMSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0310915_101158686	3300031573	Soil	VGPMSDSDLEVGPMSDSDNKQLVNDILADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318555_100986974	3300031640	Soil	SGSHNTDDLVNDMLADMCGLIVKTIALIPAERDEERLSACAFVLDQINEAVERMVNPDRTEH
Ga0318542_102569492	3300031668	Soil	ALHCASELGPMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318561_105632781	3300031679	Soil	SMADLRRSDDERNRTTPAVRPKGRSACNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318574_106511131	3300031680	Soil	DSDKEQLVSNMLADICGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318496_106762091	3300031713	Soil	VIRNVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0306917_103125523	3300031719	Soil	SDLEVGPMSDSDNKQLVNDILADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0306917_110012922	3300031719	Soil	MSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTL
Ga0318493_102257571	3300031723	Soil	DKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH
Ga0318493_105111651	3300031723	Soil	LGQTALHCASELGPMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0306918_102310581	3300031744	Soil	SEIGPMSGSHNTDDLVNDMLADMCGLIVKTIALIPAERDEERLSACAFVLDQINEAVERMVNPDRTEH
Ga0306918_104252242	3300031744	Soil	DMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318494_107263941	3300031751	Soil	NMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318537_102551181	3300031763	Soil	TPAVRPKGRSACNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318535_100831201	3300031764	Soil	INDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318554_101395012	3300031765	Soil	MSDSDLEVGPMSDSDNEQLVNDILADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318509_101463463	3300031768	Soil	GRMSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318546_107061441	3300031771	Soil	GYAPLVLGQTALHCASELGPMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318552_101261081	3300031782	Soil	MSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318503_100262422	3300031794	Soil	MSDSDKEQLVSNMRADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318497_106856962	3300031805	Soil	NDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0310917_111000522	3300031833	Soil	LGLYFQQPAMSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318511_102427232	3300031845	Soil	RPMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318527_104845702	3300031859	Soil	LEVGRMSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318522_103124703	3300031894	Soil	TRALEVGPMSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318551_103216031	3300031896	Soil	RPKGRSACNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0310910_100659251	3300031946	Soil	MSDSDNKQLVNDILADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0310909_100911161	3300031947	Soil	NDMLADMCGLIGKTLALVPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318530_104562742	3300031959	Soil	SYSRIGVGPMSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318569_100791013	3300032010	Soil	MSGSHNTDDLVNDMLADMCGLIVKTIALIPAERDEERLSACAFVLDQINEAVERMVNPDRTEH
Ga0318549_101827882	3300032041	Soil	MSDSDKEQLVSNMLADICGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVR
Ga0318532_102479101	3300032051	Soil	HLTRALEVGPMSDSDLEVGPMSDSDNEQLVNDMLADMCGLIGKTLALIPPEHDKERLSACAFVLDQINNAIKRTLSADRTEH
Ga0318575_101489431	3300032055	Soil	IGRMSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH
Ga0318524_103617552	3300032067	Soil	TLLGLYFQQPAMSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318540_101145111	3300032094	Soil	PPSYSRIGVGPMSDSDKGQLINDMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVGTDRTEH
Ga0318540_104454372	3300032094	Soil	PKFTCASEIGPMSGSHNTDDLVNDMLADMCGLIVKTIALIPAERDEERLSACAFVLDQINEAVERMVNPDRTEH
Ga0306920_1028680481	3300032261	Soil	PMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0310914_111731672	3300033289	Soil	CASELGPMSDSDKEQLVSNMLADMCGLIVKTIALIPPEHDDARLSACAFVLDQINEAVERMVRTDRTEH
Ga0318519_101270843	3300033290	Soil	HLTRTLEVGRMSDSDKEQLVNDMLADMCGLIGKTLALIAPEYDKERLSACAFVLDQINETVNRIVSADRTEH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045341

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences