Metagenome / Metatranscriptome Family F045513

Basic Information
Family ID	F045513
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	48 residues
Representative Sequence	MKTLLVLALLLCAAATAHAETQTFLAYDFEFENGSVLPELRVAYET
Number of Associated Samples	125
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.86 %
% of genes near scaffold ends (potentially truncated)	90.79 %
% of genes from short scaffolds (< 2000 bps)	88.16 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (61.842 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (54.605 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.711 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.05% β-sheet: 0.00% Coil/Unstructured: 45.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF00528	BPD_transp_1	55.92
PF00571	CBS	7.24
PF02265	S1-P1_nuclease	1.32
PF02566	OsmC	0.66
PF00126	HTH_1	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.66
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.66

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
All Organisms	root	All Organisms	38.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
cellular organisms	root	All Organisms → cellular organisms	38.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.97 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.66 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.97 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.66 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.97 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.66 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.97 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	0.66 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.84 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.97 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	0.66 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10393929	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300003219\|JGI26341J46601_10156420	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300004091\|Ga0062387_100079706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1692	Open in IMG/M
3300005174\|Ga0066680_10750426	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005179\|Ga0066684_10043896	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300005439\|Ga0070711_101817224	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300005561\|Ga0066699_10023007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3464	Open in IMG/M
3300005764\|Ga0066903_102555845	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300005764\|Ga0066903_102560867	Not Available	988	Open in IMG/M
3300005921\|Ga0070766_10241250	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300006028\|Ga0070717_11656001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	579	Open in IMG/M
3300006046\|Ga0066652_100684160	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300009012\|Ga0066710_104398932	Not Available	526	Open in IMG/M
3300009088\|Ga0099830_10701098	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009089\|Ga0099828_10664215	Not Available	937	Open in IMG/M
3300009143\|Ga0099792_10600361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	701	Open in IMG/M
3300010048\|Ga0126373_10083413	All Organisms → cellular organisms → Bacteria → Proteobacteria	2920	Open in IMG/M
3300010159\|Ga0099796_10426799	Not Available	586	Open in IMG/M
3300010343\|Ga0074044_10467798	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300010358\|Ga0126370_11908277	Not Available	578	Open in IMG/M
3300010366\|Ga0126379_11760244	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300010376\|Ga0126381_100083256	All Organisms → cellular organisms → Bacteria → Proteobacteria	4032	Open in IMG/M
3300011120\|Ga0150983_15373692	Not Available	1047	Open in IMG/M
3300011270\|Ga0137391_11349409	Not Available	560	Open in IMG/M
3300012096\|Ga0137389_11333717	Not Available	612	Open in IMG/M
3300012202\|Ga0137363_10108161	Not Available	2126	Open in IMG/M
3300012202\|Ga0137363_10148084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1841	Open in IMG/M
3300012209\|Ga0137379_10452099	Not Available	1193	Open in IMG/M
3300012211\|Ga0137377_10463574	All Organisms → cellular organisms → Bacteria → Proteobacteria	1205	Open in IMG/M
3300012212\|Ga0150985_113367502	Not Available	570	Open in IMG/M
3300012285\|Ga0137370_10733104	Not Available	614	Open in IMG/M
3300012354\|Ga0137366_11172737	Not Available	524	Open in IMG/M
3300012361\|Ga0137360_11366230	Not Available	611	Open in IMG/M
3300012363\|Ga0137390_11102929	Not Available	743	Open in IMG/M
3300012944\|Ga0137410_10296426	Not Available	1280	Open in IMG/M
3300016270\|Ga0182036_11410579	Not Available	583	Open in IMG/M
3300016294\|Ga0182041_10442907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300016294\|Ga0182041_11535342	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300016341\|Ga0182035_12199086	Not Available	500	Open in IMG/M
3300016387\|Ga0182040_10959814	Not Available	711	Open in IMG/M
3300016404\|Ga0182037_11482472	Not Available	601	Open in IMG/M
3300016422\|Ga0182039_10392800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300016445\|Ga0182038_10690151	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300016445\|Ga0182038_10695220	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300017970\|Ga0187783_10567669	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300018060\|Ga0187765_10594541	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300018468\|Ga0066662_10571710	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300020580\|Ga0210403_10345285	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218	Open in IMG/M
3300021086\|Ga0179596_10724610	Not Available	503	Open in IMG/M
3300021168\|Ga0210406_10272068	Not Available	1384	Open in IMG/M
3300021432\|Ga0210384_11462450	Not Available	589	Open in IMG/M
3300021476\|Ga0187846_10298234	Not Available	667	Open in IMG/M
3300021560\|Ga0126371_10510662	Not Available	1350	Open in IMG/M
3300021560\|Ga0126371_12992313	Not Available	572	Open in IMG/M
3300021560\|Ga0126371_13566943	Not Available	525	Open in IMG/M
3300022507\|Ga0222729_1005361	Not Available	1195	Open in IMG/M
3300022508\|Ga0222728_1008980	Not Available	1262	Open in IMG/M
3300022529\|Ga0242668_1052571	Not Available	730	Open in IMG/M
3300022533\|Ga0242662_10284078	Not Available	547	Open in IMG/M
3300022712\|Ga0242653_1057707	Not Available	643	Open in IMG/M
3300022714\|Ga0242671_1101136	Not Available	549	Open in IMG/M
3300022717\|Ga0242661_1143553	Not Available	531	Open in IMG/M
3300022726\|Ga0242654_10150718	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300025939\|Ga0207665_11461899	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026542\|Ga0209805_1055071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1971	Open in IMG/M
3300026847\|Ga0207802_1021181	Not Available	562	Open in IMG/M
3300026909\|Ga0207858_1016996	Not Available	703	Open in IMG/M
3300027583\|Ga0209527_1116882	Not Available	596	Open in IMG/M
3300027875\|Ga0209283_10891378	Not Available	539	Open in IMG/M
3300027882\|Ga0209590_11002202	Not Available	521	Open in IMG/M
3300029636\|Ga0222749_10107835	Not Available	1315	Open in IMG/M
3300031057\|Ga0170834_100010291	Not Available	1010	Open in IMG/M
3300031231\|Ga0170824_111059789	Not Available	542	Open in IMG/M
3300031469\|Ga0170819_12564330	Not Available	552	Open in IMG/M
3300031469\|Ga0170819_16282152	Not Available	553	Open in IMG/M
3300031543\|Ga0318516_10236201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300031546\|Ga0318538_10143971	Not Available	1256	Open in IMG/M
3300031549\|Ga0318571_10237664	Not Available	665	Open in IMG/M
3300031561\|Ga0318528_10085010	All Organisms → cellular organisms → Bacteria → Proteobacteria	1645	Open in IMG/M
3300031564\|Ga0318573_10228213	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031564\|Ga0318573_10447928	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031564\|Ga0318573_10625870	Not Available	579	Open in IMG/M
3300031572\|Ga0318515_10225782	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300031573\|Ga0310915_10086029	All Organisms → cellular organisms → Bacteria → Proteobacteria	2100	Open in IMG/M
3300031668\|Ga0318542_10217442	Not Available	966	Open in IMG/M
3300031668\|Ga0318542_10368176	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031668\|Ga0318542_10685387	Not Available	536	Open in IMG/M
3300031681\|Ga0318572_10591876	Not Available	661	Open in IMG/M
3300031723\|Ga0318493_10866355	Not Available	510	Open in IMG/M
3300031724\|Ga0318500_10152993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300031740\|Ga0307468_101571807	Not Available	613	Open in IMG/M
3300031744\|Ga0306918_11258192	Not Available	570	Open in IMG/M
3300031747\|Ga0318502_10440704	Not Available	777	Open in IMG/M
3300031754\|Ga0307475_10406452	Not Available	1094	Open in IMG/M
3300031763\|Ga0318537_10183058	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300031764\|Ga0318535_10267909	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031770\|Ga0318521_10649769	Not Available	639	Open in IMG/M
3300031777\|Ga0318543_10438943	Not Available	585	Open in IMG/M
3300031779\|Ga0318566_10105734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300031795\|Ga0318557_10356547	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031797\|Ga0318550_10174818	Not Available	1036	Open in IMG/M
3300031797\|Ga0318550_10367868	Not Available	696	Open in IMG/M
3300031797\|Ga0318550_10519918	Not Available	574	Open in IMG/M
3300031819\|Ga0318568_10076029	Not Available	1981	Open in IMG/M
3300031831\|Ga0318564_10142517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300031833\|Ga0310917_10139318	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300031833\|Ga0310917_10699673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300031833\|Ga0310917_10824348	Not Available	626	Open in IMG/M
3300031835\|Ga0318517_10499909	Not Available	548	Open in IMG/M
3300031845\|Ga0318511_10565250	Not Available	529	Open in IMG/M
3300031859\|Ga0318527_10455456	Not Available	545	Open in IMG/M
3300031890\|Ga0306925_10495062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300031894\|Ga0318522_10399561	Not Available	521	Open in IMG/M
3300031896\|Ga0318551_10766892	Not Available	560	Open in IMG/M
3300031897\|Ga0318520_10224314	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300031910\|Ga0306923_12498051	Not Available	509	Open in IMG/M
3300031945\|Ga0310913_10158759	Not Available	1566	Open in IMG/M
3300031945\|Ga0310913_10229922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1300	Open in IMG/M
3300031945\|Ga0310913_10661935	Not Available	739	Open in IMG/M
3300031945\|Ga0310913_11292111	Not Available	506	Open in IMG/M
3300031946\|Ga0310910_10224832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1462	Open in IMG/M
3300031947\|Ga0310909_10214818	Not Available	1601	Open in IMG/M
3300031954\|Ga0306926_10713559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1215	Open in IMG/M
3300031959\|Ga0318530_10105745	Not Available	1122	Open in IMG/M
3300032001\|Ga0306922_10691423	Not Available	1074	Open in IMG/M
3300032009\|Ga0318563_10256135	Not Available	946	Open in IMG/M
3300032035\|Ga0310911_10586930	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300032043\|Ga0318556_10541892	Not Available	608	Open in IMG/M
3300032044\|Ga0318558_10274710	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300032051\|Ga0318532_10358089	Not Available	518	Open in IMG/M
3300032054\|Ga0318570_10238021	Not Available	825	Open in IMG/M
3300032054\|Ga0318570_10496085	Not Available	557	Open in IMG/M
3300032055\|Ga0318575_10140397	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300032060\|Ga0318505_10092278	Not Available	1361	Open in IMG/M
3300032065\|Ga0318513_10316821	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300032067\|Ga0318524_10582146	Not Available	589	Open in IMG/M
3300032076\|Ga0306924_10258802	All Organisms → cellular organisms → Bacteria → Proteobacteria	1998	Open in IMG/M
3300032076\|Ga0306924_10838779	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300032174\|Ga0307470_11198043	Not Available	617	Open in IMG/M
3300033289\|Ga0310914_10262605	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.34%
Host-Associated	Host-Associated	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.03%
Aquatic	Environmental → Aquatic	1.32%
Plants	Host-Associated → Plants	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.37%
Freshwater	Environmental → Aquatic → Freshwater	1.32%
Cave	Environmental → Terrestrial → Cave	0.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.16%
Loam	Environmental → Terrestrial → Soil → Loam	7.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.32%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.32%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.66%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103939292	3300001867	Forest Soil	LAGALAVCLAGAVRAEPQVFNVYDSAFEDGSVLPELRVAYETHGRLRAGR
JGI26341J46601_101564202	3300003219	Bog Forest Soil	LKAFLAVALAVCIAAAARAEPQIFNVYDFEFEDGSVLPELRVAYETHGTLGAGRNNA
Ga0062387_1000797061	3300004091	Bog Forest Soil	LAGALAVCVAGAARAEPQIFNVYDFAFEDGSVLPELRVAYETHGQ
Ga0066680_107504263	3300005174	Soil	MKTLLVLGLALCAAVGARAETQTFLTYDFEFEDGSVLSELRVAYETQGKLDGGRDNAILLLHG
Ga0066684_100438961	3300005179	Soil	LAFALVVAVAAAARAEPQIFNIYDFAFEDGSILPELRVAYETHGKLGAGRDNAILLL
Ga0070711_1018172243	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VKSFLAIALAACITTGARAESETFLIYDFQFENGSVLPELRVAYETH
Ga0066699_100230076	3300005561	Soil	MKAVMAVALAVCLPAAAHAEPQIFNVYDFEFEDGAVVPELRVAYE
Ga0066903_1025558451	3300005764	Tropical Forest Soil	MKTLLVFALALCTAVAAHAETQSFLAYDFEFEDGSVLPELRTA*
Ga0066903_1025608671	3300005764	Tropical Forest Soil	MKRRLGFALTLCAAVTAHAETQTFLAYDFEFENGSVLPELRV
Ga0070766_102412503	3300005921	Soil	LAGALAVCVAAAARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGA
Ga0070717_116560013	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LKAFLTVALTVCLAAAARAEPQIFNAYDFDFEDGSVMPELRVAYETHGTLNAG
Ga0066652_1006841601	3300006046	Soil	LAFALAVSVAAAARAEPQIFNVYDFAFEDGSILPELRVACDTHGKLSAGRDNAILLLHG
Ga0066710_1043989321	3300009012	Grasslands Soil	MKTLLVLVLALCVVVGAHAENQTFLAYDFEFEYVPVFP
Ga0099830_107010981	3300009088	Vadose Zone Soil	VKTFFAVALTVCVSFGARAEPQIFNIYDFQFENGSILPELRVAYETH
Ga0099828_106642153	3300009089	Vadose Zone Soil	VKTFLAIALAACLTTGARAESETFLIYDFQFENGSVLPELRVAYET
Ga0099792_106003614	3300009143	Vadose Zone Soil	MKTLLVLVLALCVAVGARAETQTFLTYDFEFEDGS
Ga0126373_100834135	3300010048	Tropical Forest Soil	MKRRLSFALTLCATVTAHAETQTFLAYDFEFENGSVLPELRVAYE
Ga0099796_104267991	3300010159	Vadose Zone Soil	LKALLAGALAVCVAGAAHAEPPIFNAYDFAFEDGSILPELRVAYETYGKLGAGRDNA
Ga0074044_104677981	3300010343	Bog Forest Soil	VKRLLACALALCIAVTAHAETQTFLAYDFEFESGPV
Ga0126370_119082773	3300010358	Tropical Forest Soil	MKQIFALVLIVCAASIARAEPQTFLVYDFEFENGPVLPELRVAYETHGTL
Ga0126379_117602442	3300010366	Tropical Forest Soil	MGNGMKLLLALGLALCGASAAHAETQTFLAYDFEFE
Ga0126381_1000832566	3300010376	Tropical Forest Soil	MKTLLVLALLLCAAATAHAETQTFLAYDFEFENGSVL
Ga0150983_153736921	3300011120	Forest Soil	MKTLLALGLILCTAAAARAETQTFLAYDFEFEDGSVLPELRVAYE
Ga0137391_113494093	3300011270	Vadose Zone Soil	MVPRGRKRMRTLLVVALALFTTLSAHAETQTFLTYDFEFENGSVLPELRVAYETQGTLDAGR
Ga0137389_113337171	3300012096	Vadose Zone Soil	VKTFFAVALTVCVSFGARAEPQIFNIYDFQFENGSVLPELRVAYETH
Ga0137363_101081615	3300012202	Vadose Zone Soil	MKTLLVLVLALCAAVGAHAETQTFLTYDFEFEDGSVLP
Ga0137363_101480841	3300012202	Vadose Zone Soil	MKTLLVLVLALCAAVGAHAETQTFLTYDFEFEDGSVLPE
Ga0137379_104520991	3300012209	Vadose Zone Soil	VKTFLAIALAACLTTGARAESETFLIYDFQFENGSVLPELRVAYETHGKLNAGRDNAI
Ga0137377_104635741	3300012211	Vadose Zone Soil	MKTLLVLVLALCAAVGAHAETQTFLTYDFEFEDGS
Ga0150985_1133675023	3300012212	Avena Fatua Rhizosphere	MKTLLVLALALCAGIGARAETQTFLTYDFEFEDGPVLPELRVAYETH
Ga0137370_107331041	3300012285	Vadose Zone Soil	MKALTAVALAICLAAAAHAEPQIFNIYDFEFEDGSVMPELRVAYETHG
Ga0137366_111727371	3300012354	Vadose Zone Soil	VKTFLAIALAACLTTGARAESETFLIYDFQFENGSVLPELRVAYETHGKLNAG
Ga0137360_113662303	3300012361	Vadose Zone Soil	MKTLLVLVLALCAAVGARAETQTFLTYDFEFEDGSVLPELRA
Ga0137390_111029291	3300012363	Vadose Zone Soil	MRTLLVVALALCTTVAAHAETQTFLTYDFEFENGSV
Ga0137410_102964264	3300012944	Vadose Zone Soil	VKTFLAIALAACLTTGARAESQTFLIYDFQFENGSVLPELRVAYETHGKLSAGR
Ga0182036_114105791	3300016270	Soil	MKTLLAFALVLCAVVTAHAETQTFLTYDFEFENGSVLPELRVAY
Ga0182041_104429071	3300016294	Soil	MKLLLALGLALCGAFAAHAETQTFLAYDFEFETGAVLPEL
Ga0182041_115353422	3300016294	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLPEVRIAYETQG
Ga0182035_121990861	3300016341	Soil	MKTLLACALALFVAVTARAETQTFLAYDFEFENGS
Ga0182040_109598143	3300016387	Soil	MRMLLFCALALGAAVAARAETQTFLAYDFEFEDGSVLPELRVAYETHGDLAP
Ga0182037_114507291	3300016404	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGHLDPGRGNAILLVHGTS
Ga0182037_114824721	3300016404	Soil	MKRRLGFALTLCAAVTAHAETQTFLAYDFEFENGS
Ga0182039_103928003	3300016422	Soil	MKALLVFALALCAGATARAENQIFNAYDFAFENGSVMPELRVAYETRGHLDPGR
Ga0182038_106901511	3300016445	Soil	MRTLLCIALALCAATSAHAESQIFNAYDFEFENGSVLPELRV
Ga0182038_106952203	3300016445	Soil	MRTLLAFALVLCAAFTAHAETQTFLTYDFEFENGSVLPELRV
Ga0182038_113005351	3300016445	Soil	MKTLLGLALVLCTAVSARADSQIFNAYDFEFENGPVMPELRIAYETHGNLDPSRDNA
Ga0187783_105676691	3300017970	Tropical Peatland	MRGQLFCALALLVSVTARAETETFLAYDFEFENGSILPELRVAYETHGDLAP
Ga0187765_105945411	3300018060	Tropical Peatland	MKELPVLVLVLCAAVTARADTQIFNSYDFEFESGAVLPELRVAYETR
Ga0066662_105717101	3300018468	Grasslands Soil	LAFALVVAVAAAARAEPQIFNIYDFAFEDGSVLPELRVAYETHGKLGAGRDN
Ga0210403_103452851	3300020580	Soil	MKTLLALGLILCTAAAARAETQTFLAYDFEFEDGSVLP
Ga0179596_107246103	3300021086	Vadose Zone Soil	MKTLLALGLVLCTAAAARAETQTFLTYDFEFEDGSVLPELRVAYET
Ga0210406_102720682	3300021168	Soil	LAGALAVCLAAAARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGA
Ga0210384_114624501	3300021432	Soil	MKRRLAFALALCAAVTAHAETQTFLAYDFEFENGSVLPELRV
Ga0187846_102982341	3300021476	Biofilm	MKTLLVFALALCAAVAAHAQTQTFLAYDFEFEDGSVLPE
Ga0126371_105106624	3300021560	Tropical Forest Soil	MKLLLALGLALCGASAAHAETQTFLAYDFEFETGAVLPELRVAYETYGTLNAARD
Ga0126371_129923131	3300021560	Tropical Forest Soil	MKTLLFCVLALGAAVAAHAETQTFLAYDFEFEDGSVLPELRVAYETHGDLAPGRDNA
Ga0126371_135669431	3300021560	Tropical Forest Soil	LRAILAFALAVCVAGAARAEPQIFNIYDFEFEDGSILPELRVAYETHGILN
Ga0222729_10053613	3300022507	Soil	MKTLLVLVLALCAAVGAHAETQTFLTYDFEFEDGSVLPELRVAYETQGK
Ga0222728_10089801	3300022508	Soil	LAGALAVCVAAAARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGAGRD
Ga0242668_10525711	3300022529	Soil	LAGALAVCVAAAARAEPQIFNVYDFAFENGSILPELRVAYETHGKRGAGRDNAILL
Ga0242662_102840783	3300022533	Soil	MAVCVAAAAHAEPQIFNAYDFEFEDGSVMPELRVAYET
Ga0242653_10577071	3300022712	Soil	MKTLLALGLILCTAAAARAETQTFLAYDFEFEDGSV
Ga0242671_11011363	3300022714	Soil	LAGALALCVAGSARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLG
Ga0242661_11435533	3300022717	Soil	MKTLLVLVLALCAAVVAHAQTQTFLTYDFEFEDGSVLPELRVAYET
Ga0242654_101507181	3300022726	Soil	MRTLLGIALALCAATSARAESQIFNAYDFEFESGSVLPELRV
Ga0207665_114618991	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VACALAVCVAAAARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGAGRDNAILLL
Ga0209805_10550714	3300026542	Soil	MKALMAVALAVCLAAAAHAEPQIFNVYDFEFEDGAVVPELRVAYE
Ga0207802_10211813	3300026847	Tropical Forest Soil	MKTLLVCALALCAATTARADTQTFLAYDFEFENGSVLPELRVA
Ga0207858_10169961	3300026909	Tropical Forest Soil	MKTLLVCALALCAATTARADTQTFLAYDFEFENGSVLP
Ga0209527_11168821	3300027583	Forest Soil	MKTLLVLVLALCAAVGAHAETQTFLTYDFEFEDGSVLPELRVA
Ga0209283_108913783	3300027875	Vadose Zone Soil	MKTLLALGLVLCTAAAARAETQTFLTYDFEFEDGSVLPELRVAYETQGTLDAGR
Ga0209590_110022021	3300027882	Vadose Zone Soil	MKTLLALGLVLCTAAAARAETQTFLTYDFEFEDGSVLPELRVAYETQG
Ga0222749_101078353	3300029636	Soil	LAGALAVCVAAAARAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGAG
Ga0170834_1000102913	3300031057	Forest Soil	MKTLLVLALLLCAAVTGHAETQTFLAYDFEFENGSVLPELRVAYETHG
Ga0170824_1110597891	3300031231	Forest Soil	MRTLLCIALALCAATSAHAESQIFNAYDFEFENGSVLPELR
Ga0170819_125643301	3300031469	Forest Soil	MKRRLGFALTLCAAVTAHAETQTFLAYDFEFENGSI
Ga0170819_162821521	3300031469	Forest Soil	MKTLLVLVLALCAAVGARAETQTFLTYEFEFEDGSVLPELRVA
Ga0318516_102362011	3300031543	Soil	MKMLLAFALTLCIAANAQAEPQTFLLYDFEFENGSVLPELRVAYETQGKLNAGRDNAIRL
Ga0318541_103021073	3300031545	Soil	MKALLVFALALCAGATARAENQIFNAYDFAFENGSVMPELRVAYETRGHLDPGRGNAILL
Ga0318538_101439711	3300031546	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVIP
Ga0318571_102376641	3300031549	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSVLPELRVAYETHGDLDPGRDNAV
Ga0318528_100850103	3300031561	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHGSVLPEVRIAYETQGNLDPARDN
Ga0318573_102282131	3300031564	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSVLPEL
Ga0318573_104479281	3300031564	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHGSV
Ga0318573_106258701	3300031564	Soil	MKALLVFALALCAGATARAENQIFNAYDFAFENGSVMPE
Ga0318515_102257821	3300031572	Soil	MRTLLAFALVLCAAFTAHAETQTFLTYDFEFENGSVLPELRVAYETYGNL
Ga0310915_100860291	3300031573	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHESVLPEVRIAYETQGNLDPARD
Ga0318542_102174423	3300031668	Soil	MKTLLVLALLLCAAATAHAETQTFLAYDFEFENGSVLPELRVAYET
Ga0318542_103681761	3300031668	Soil	LRSFLSAVLAVCVSFSARAESQIFNIYDFQFESGAVLSELRVAYETQG
Ga0318542_106853873	3300031668	Soil	MRTLLFCALALGAAVAARAETQTFLAYDFEFEDGSVLPELRVAYETHGDLAPG
Ga0318574_106433031	3300031680	Soil	MKALLVFALALCAGATARAENQIFNAYDFAFENGSVMPELRVAYETRGHLDPGRGNAIL
Ga0318572_105918761	3300031681	Soil	MKGFWAAALTACVAFGARAEPQTFLIYDFAFESGAVLPELRVAYETQGKLSAGRDNGILL
Ga0318493_108663551	3300031723	Soil	MRTLLAFALVLCAAFTAHAETQTFLTYDFEFENGSVLPELRVAYETHGNLDPGRDNA
Ga0318500_101529931	3300031724	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSVLPELRVAYETH
Ga0307468_1015718071	3300031740	Hardwood Forest Soil	MKTLLIFGLALCAAIGARAETETFLTYDFEFENGSVLPELRV
Ga0306918_112581921	3300031744	Soil	MKTLLVFALALCAAVTARAETQIFNAYDFEFENGSVMPELR
Ga0318502_104407041	3300031747	Soil	MKMLLAFALTLCIAANAQAEPQTFLLYDFEFENGSVLPELRVAYETQGKLNAG
Ga0318492_102295583	3300031748	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGHLDPGRGNAILLVHGTSGDRHVFDPVIGPSK
Ga0307475_104064521	3300031754	Hardwood Forest Soil	LAGALAVCLAGAVRAEPQIFNVYDFAFEDGSILPELRVAYETHGKLGAGRDNAILL
Ga0318537_101830581	3300031763	Soil	MKTLLACALALFIAVTARAETQTFLAYDFEFENGSVLPELRVAYETHGNLDPGR
Ga0318535_102679092	3300031764	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHGSVLPEVRIAYETQG
Ga0318521_101540744	3300031770	Soil	MKTLLGLALVLCTAVSARADTQIFNAYDFEFENGPVMPELRIAYETHGNLDPGRD
Ga0318521_106497691	3300031770	Soil	MKLLLALGLALCGAFAAHAETQTFLAYDFEFETGAVLPELRVAYETYGTLNA
Ga0318546_104845611	3300031771	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGHLDPGRGNAILL
Ga0318543_101171203	3300031777	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGHLDPGRGNAILLVHGTSGDRHVFDPVIGPSKT
Ga0318543_104389433	3300031777	Soil	MKTLLVFALALCAAAAARAETQTFLAYDFEFENGSVLPELR
Ga0318566_101057341	3300031779	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLPEVRIAYETQGNLDPARDN
Ga0318557_103565471	3300031795	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLP
Ga0318550_101748182	3300031797	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLPEVRIAYET
Ga0318550_103678683	3300031797	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENRSVLPE
Ga0318550_105199182	3300031797	Soil	LAGALAVCVAGAARAEPQIFNVYDFAFEDGSILPELRVAYETHGQL
Ga0318568_100760294	3300031819	Soil	MKTLLACALALFIAVTARAETQTFLAYDFEFENGSVLPELRVAYETH
Ga0318564_101425171	3300031831	Soil	MKTLLGLALVLCTAVSARADSQIFNAYDFEFENGPVMPELR
Ga0310917_101393184	3300031833	Soil	MRTLLAFALVLCAAFTAHAETQTFLTYDFEFENGSVLPELRVAYETYGNLDPGR
Ga0310917_106996731	3300031833	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYAT
Ga0310917_108243481	3300031833	Soil	MKTLLVFALALCAAVTARAETQIFNAYDFEFENGSVMPEL
Ga0318517_104999093	3300031835	Soil	MKTLLACALALFIAVTARAETQTFLAYDFEFENGSVLPELRVAYETHGNLDP
Ga0318511_105652503	3300031845	Soil	LRVYLYILLIACVPFGAHAESQTFNIYDFQFESGAVLPELRVSYETHGKLNAGRDNA
Ga0318527_100687751	3300031859	Soil	MKTLLGLALVLCTAVSARADTQIFNAYDFEFENGPVMPELRIAYETHGNLDPGGDNAIL
Ga0318527_104554561	3300031859	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENRSVLPEL
Ga0306925_102300341	3300031890	Soil	MKALLVFALALCAGATARAENQIFNAYDFAFENGSVMPELRVAYETRGHLDPGRGNAILLVHGT
Ga0306925_104950623	3300031890	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLPEVRIAYE
Ga0318522_103995613	3300031894	Soil	MKTLLVLALALCAGATARAETQIFNAYDFEFENGSLMPELRIAYETEGHLDPGRDNGILLVHGA
Ga0318551_107668921	3300031896	Soil	MKGFWAAALTACVAFGARAEPQTFLIYDFAFESGAVLPELRVAYETQGKLSAGRDNGI
Ga0318520_102243143	3300031897	Soil	MKTLLAFALVLWAAIAARAETQTFLTYDFEFENGSVLPEVRVAYETHGDLDPGRDNAI
Ga0306923_124980513	3300031910	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSVLPELRVAYE
Ga0310913_101587591	3300031945	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGH
Ga0310913_102299223	3300031945	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHGSVLPEVRIAYETQGNLDPA
Ga0310913_106619351	3300031945	Soil	MKMLLAFALTLCIAANAQAEPQTFLLYDFEFENGSVLPELRVAYETQGK
Ga0310913_112921113	3300031945	Soil	MKRRLGFALTLCAAVTAHAETQTFLAYDFEFENGSVLPELRVAYETQGSLNPGRDNAI
Ga0310910_102248324	3300031946	Soil	MRTLLFCVLALGAAVAARAETQTFLTYDFEFEDGSVLPELRVAYETHGDLAPGRDN
Ga0310909_102148184	3300031947	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRI
Ga0306926_107135591	3300031954	Soil	MRMLLFCALALGAAAAAHAETQTFLAYDFEFENGSVLPE
Ga0318530_101057453	3300031959	Soil	MKTLLGLALVLCTAVSARADTQIFNAYDFEFENGPVMPEL
Ga0306922_106914231	3300032001	Soil	MKTLLVFALMLCAATTARAETQTFLAYDFEFEHGSVLPEVRIAY
Ga0318563_102561353	3300032009	Soil	MKTLLAFALVLWAAIAARAETQTFLTYDFEFENGSVLPEVRV
Ga0310911_105869301	3300032035	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHGSVLP
Ga0318556_105418921	3300032043	Soil	MKLLLALGLALCGAFAAHAETQTFLAYDFEFETGAVLPELRVAYETYGTLNAARD
Ga0318558_102747101	3300032044	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSVLPELRVAYETHGDLDPGR
Ga0318532_103580893	3300032051	Soil	MKTLLGLALVLCTAVSARADSQIFNAYDFEFENGPVMPELRIA
Ga0318570_102380211	3300032054	Soil	MKMLLAFALTLCIAANAQAEPQTFLLYDFEFENGSVLPELRVTYETQGKLNAGRDN
Ga0318570_102736223	3300032054	Soil	MKTLLGLALVLCTAVSARADTQIFNAYDFEFENGPVMPELRIAYETHGNLDPGRDNAILL
Ga0318570_104960851	3300032054	Soil	MKLLLALGLALCGAFAAHAETQTFLAYDFEFETGAVLP
Ga0318575_101403971	3300032055	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQ
Ga0318505_100922784	3300032060	Soil	MKTLLAFALVLWAAIAAHAETQTFLTYDFEFENGSV
Ga0318513_103168211	3300032065	Soil	MKTLLVFALALCAAVTARAESQIFNAYDFEFENGSVMPELRIAYATQGHLDPGRG
Ga0318524_105821463	3300032067	Soil	MRTLLAFALVLCAAFTAHAETQTFLTYDFEFENGSVLPELRVAYETYG
Ga0306924_102588024	3300032076	Soil	MKTLLAFALVLCAAVAAHAETQTFLTYDFEFENGSVLPE
Ga0306924_108387792	3300032076	Soil	MKTLLVFAVMLCAAATARAETQTFLAYDFEFEHESVLPEVRIAYETQGNLDPARDN
Ga0318525_101866911	3300032089	Soil	MKTLLGLALVLCTAVSARADTQIFNAYDFEFENGPVMPELRIAYETHGNLDPG
Ga0307470_111980431	3300032174	Hardwood Forest Soil	LGIALALCAATSARAESQIFNAYDFEFESGSVLPELRVAYETHGNLNPGR
Ga0310914_102626054	3300033289	Soil	LRSFLSAVLAVCVSFSARAESQIFNIYDFQFESGAVLSELRVAYETQGKLNTGRD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045513

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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