NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F045592

Metagenome Family F045592

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045592
Family Type Metagenome
Number of Sequences 152
Average Sequence Length 49 residues
Representative Sequence MSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAAGKKK
Number of Associated Samples 118
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.50 %
% of genes near scaffold ends (potentially truncated) 15.13 %
% of genes from short scaffolds (< 2000 bps) 84.87 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.395 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.158 % of family members)
Environment Ontology (ENVO) Unclassified
(42.763 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.132 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.95%    β-sheet: 0.00%    Coil/Unstructured: 96.05%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 152 Family Scaffolds
PF07883Cupin_2 26.32
PF01966HD 17.11
PF12146Hydrolase_4 3.95
PF00561Abhydrolase_1 2.63
PF00072Response_reg 1.97
PF12697Abhydrolase_6 1.97
PF02148zf-UBP 1.97
PF13460NAD_binding_10 1.32
PF07452CHRD 1.32
PF01545Cation_efflux 1.32
PF13570PQQ_3 0.66
PF04366Ysc84 0.66
PF07992Pyr_redox_2 0.66
PF00190Cupin_1 0.66
PF08447PAS_3 0.66
PF00355Rieske 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 152 Family Scaffolds
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 1.97
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 1.32
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 1.32
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 1.32
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.66

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.39 %
UnclassifiedrootN/A4.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17102226All Organisms → cellular organisms → Bacteria1037Open in IMG/M
2228664021|ICCgaii200_c0973130All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300000955|JGI1027J12803_100484508All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300000955|JGI1027J12803_100796213All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300000956|JGI10216J12902_121002579All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M
3300001116|JGI12627J13344_100983All Organisms → cellular organisms → Bacteria → Proteobacteria4163Open in IMG/M
3300001116|JGI12627J13344_101186All Organisms → cellular organisms → Bacteria3495Open in IMG/M
3300004480|Ga0062592_101724942All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005293|Ga0065715_10167460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1573Open in IMG/M
3300005293|Ga0065715_10196487All Organisms → cellular organisms → Bacteria → Proteobacteria1379Open in IMG/M
3300005293|Ga0065715_10359846All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300005294|Ga0065705_10145306All Organisms → cellular organisms → Bacteria2055Open in IMG/M
3300005331|Ga0070670_100802370All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005332|Ga0066388_102777364All Organisms → cellular organisms → Bacteria → Proteobacteria894Open in IMG/M
3300005340|Ga0070689_101169610All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005343|Ga0070687_100505121All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300005356|Ga0070674_101439053All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005366|Ga0070659_101837617All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005440|Ga0070705_100587427All Organisms → cellular organisms → Bacteria → Proteobacteria860Open in IMG/M
3300005440|Ga0070705_101703134Not Available533Open in IMG/M
3300005444|Ga0070694_100075029All Organisms → cellular organisms → Bacteria2338Open in IMG/M
3300005445|Ga0070708_100823179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium873Open in IMG/M
3300005445|Ga0070708_101334111All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300005459|Ga0068867_100291060All Organisms → cellular organisms → Bacteria → Proteobacteria1343Open in IMG/M
3300005467|Ga0070706_101220279All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005467|Ga0070706_101337565All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300005468|Ga0070707_100264649All Organisms → cellular organisms → Bacteria → Proteobacteria1672Open in IMG/M
3300005468|Ga0070707_100915300All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300005471|Ga0070698_100020409All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6945Open in IMG/M
3300005518|Ga0070699_100716480All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005518|Ga0070699_100763481All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300005536|Ga0070697_100165572All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300005536|Ga0070697_100468822All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300005543|Ga0070672_100795601All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005546|Ga0070696_100711358All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005546|Ga0070696_101892469Not Available517Open in IMG/M
3300005547|Ga0070693_100081243All Organisms → cellular organisms → Bacteria → Proteobacteria1933Open in IMG/M
3300005578|Ga0068854_101415910All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300005617|Ga0068859_101148707All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300005618|Ga0068864_100860272All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300005718|Ga0068866_10045731All Organisms → cellular organisms → Bacteria2197Open in IMG/M
3300005764|Ga0066903_101472302All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300005840|Ga0068870_11107762All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300005841|Ga0068863_100023639All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5867Open in IMG/M
3300005841|Ga0068863_102260370All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005842|Ga0068858_100062968All Organisms → cellular organisms → Bacteria3431Open in IMG/M
3300005844|Ga0068862_100478290All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300006844|Ga0075428_101740086All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300006852|Ga0075433_10378666All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300006852|Ga0075433_11457657All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009090|Ga0099827_10829625All Organisms → cellular organisms → Bacteria → Proteobacteria800Open in IMG/M
3300009098|Ga0105245_12941561All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009137|Ga0066709_101048930All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300009147|Ga0114129_10804676All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300009147|Ga0114129_11897592All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300009148|Ga0105243_10828045All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300009148|Ga0105243_10895054Not Available882Open in IMG/M
3300009148|Ga0105243_12299939All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300009162|Ga0075423_10569155All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300009174|Ga0105241_12334398All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300009174|Ga0105241_12536414Not Available514Open in IMG/M
3300009176|Ga0105242_10487057All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300009177|Ga0105248_10438761All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300009553|Ga0105249_10540750All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300009792|Ga0126374_10898324All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300010304|Ga0134088_10686057All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010358|Ga0126370_10531374All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300010359|Ga0126376_10019061All Organisms → cellular organisms → Bacteria4449Open in IMG/M
3300010362|Ga0126377_10752834All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300010366|Ga0126379_10535810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1248Open in IMG/M
3300010371|Ga0134125_10000377All Organisms → cellular organisms → Bacteria60659Open in IMG/M
3300010371|Ga0134125_11558569All Organisms → cellular organisms → Bacteria → Proteobacteria719Open in IMG/M
3300010373|Ga0134128_11697624All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300010396|Ga0134126_10010394All Organisms → cellular organisms → Bacteria11731Open in IMG/M
3300010397|Ga0134124_10223184All Organisms → cellular organisms → Bacteria1722Open in IMG/M
3300010397|Ga0134124_11994982All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300010398|Ga0126383_10017960All Organisms → cellular organisms → Bacteria5348Open in IMG/M
3300010398|Ga0126383_11561935All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300010399|Ga0134127_11085789All Organisms → cellular organisms → Bacteria → Proteobacteria864Open in IMG/M
3300010400|Ga0134122_10491987All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300010400|Ga0134122_12524517All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300010400|Ga0134122_13341015All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010401|Ga0134121_11119723All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300010401|Ga0134121_11655827All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300010403|Ga0134123_12846722All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012096|Ga0137389_11569042All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300012200|Ga0137382_11135831All Organisms → cellular organisms → Bacteria → Proteobacteria557Open in IMG/M
3300012203|Ga0137399_10398986All Organisms → cellular organisms → Bacteria → Proteobacteria1147Open in IMG/M
3300012212|Ga0150985_107746894All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae832Open in IMG/M
3300012362|Ga0137361_10891249All Organisms → cellular organisms → Bacteria → Proteobacteria807Open in IMG/M
3300012685|Ga0137397_10013781All Organisms → cellular organisms → Bacteria → Proteobacteria5659Open in IMG/M
3300012918|Ga0137396_10106817All Organisms → cellular organisms → Bacteria2005Open in IMG/M
3300012918|Ga0137396_11126936Not Available559Open in IMG/M
3300012922|Ga0137394_11552857All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012927|Ga0137416_10799189All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium834Open in IMG/M
3300012929|Ga0137404_10001603All Organisms → cellular organisms → Bacteria14923Open in IMG/M
3300012944|Ga0137410_10197294All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300012944|Ga0137410_11175269All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300012944|Ga0137410_12027653All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012989|Ga0164305_11241384All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300013296|Ga0157374_10769453All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300013297|Ga0157378_10247838All Organisms → cellular organisms → Bacteria → Proteobacteria1704Open in IMG/M
3300013297|Ga0157378_12426254All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300013308|Ga0157375_11568983All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300013500|Ga0120195_1000390All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300014326|Ga0157380_10057188All Organisms → cellular organisms → Bacteria3105Open in IMG/M
3300014745|Ga0157377_11227893All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300014968|Ga0157379_10730747All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300014968|Ga0157379_12015542All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300015245|Ga0137409_10460755All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300015372|Ga0132256_103716788All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300015374|Ga0132255_106182206All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300018000|Ga0184604_10058659All Organisms → cellular organisms → Bacteria → Proteobacteria1087Open in IMG/M
3300018028|Ga0184608_10089071All Organisms → cellular organisms → Bacteria → Proteobacteria1275Open in IMG/M
3300018054|Ga0184621_10301563All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300018061|Ga0184619_10547039Not Available507Open in IMG/M
3300018071|Ga0184618_10076164All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300018076|Ga0184609_10086253All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018476|Ga0190274_12323215All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300019789|Ga0137408_1262566All Organisms → cellular organisms → Bacteria1273Open in IMG/M
3300021445|Ga0182009_10019498All Organisms → cellular organisms → Bacteria2543Open in IMG/M
3300021560|Ga0126371_12999214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli 8C-3572Open in IMG/M
3300022534|Ga0224452_1096724All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria901Open in IMG/M
3300024232|Ga0247664_1023032All Organisms → cellular organisms → Bacteria1449Open in IMG/M
3300025885|Ga0207653_10034676All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300025899|Ga0207642_10001985All Organisms → cellular organisms → Bacteria → Proteobacteria6308Open in IMG/M
3300025904|Ga0207647_10040508All Organisms → cellular organisms → Bacteria2933Open in IMG/M
3300025910|Ga0207684_10685900All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300025911|Ga0207654_10996443All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300025912|Ga0207707_11192621All Organisms → cellular organisms → Bacteria → Proteobacteria616Open in IMG/M
3300025922|Ga0207646_10862463All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300025925|Ga0207650_11419696All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300025935|Ga0207709_10007133All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria6239Open in IMG/M
3300025935|Ga0207709_10315684All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300025941|Ga0207711_10275804All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300025941|Ga0207711_10700515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales945Open in IMG/M
3300025961|Ga0207712_10910584All Organisms → cellular organisms → Bacteria → Proteobacteria777Open in IMG/M
3300026035|Ga0207703_10332223All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300026095|Ga0207676_10429708All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300027266|Ga0209215_1000440All Organisms → cellular organisms → Bacteria → Proteobacteria4261Open in IMG/M
3300027266|Ga0209215_1000680All Organisms → cellular organisms → Bacteria → Proteobacteria3347Open in IMG/M
3300028381|Ga0268264_10714174All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300028381|Ga0268264_12091079All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales575Open in IMG/M
3300028536|Ga0137415_10142669All Organisms → cellular organisms → Bacteria2234Open in IMG/M
3300031562|Ga0310886_10599803All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300031720|Ga0307469_12211281All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300031740|Ga0307468_100104486All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300031740|Ga0307468_100482522All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300031820|Ga0307473_11557112All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300032180|Ga0307471_100867045All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300032180|Ga0307471_103182663Not Available582Open in IMG/M
3300032205|Ga0307472_102593363All Organisms → cellular organisms → Bacteria517Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.16%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.18%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil8.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.58%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.26%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.95%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.29%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.29%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.97%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.32%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.32%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.66%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.66%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.66%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.66%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.66%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001116Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013500Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027266Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_014144102088090014SoilVEDEFVFALEVDMSEQDLDVLITLDDPGEDDLEEDTFHKANSTGAHRSLQPAGDPPDKQK
ICCgaii200_097313022228664021SoilMSEEDLEVMITLDDPGEDTPEEDTFHQADNTVAHQSSQPAHEAAGKK
JGI1027J12803_10048450823300000955SoilMSEQDLDVLITLDDPGEDDLEEDTFHKANSTGAHRSLQPAGDPPDKQK*
JGI1027J12803_10079621323300000955SoilMSEEDLDVLLTLDDPGEDTLEEDTFHQADNTGEHRSSQPASDAAGKK*
JGI10216J12902_12100257923300000956SoilMSEQELEVLITLDDPGEDELEEDAFHQADSTGVHQPGGDLPGKQK*
JGI12627J13344_10098323300001116Forest SoilMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQ*
JGI12627J13344_10118623300001116Forest SoilMSEEDLEVLITLDDPGEDTLEEDTFHQADNTDAHRSSQPAGDAAGK*
Ga0062592_10172494223300004480SoilMSEQELEVLITLDDPGEDELEEDTFHQADSSGAHQPVGDLPGKQK*
Ga0065715_1016746013300005293Miscanthus RhizosphereMSEEDLEVLITLDDPGEESLEEDTFHQADNTGGHRSSQPAGDSGEKN*
Ga0065715_1019648723300005293Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDPPG*
Ga0065715_1035984623300005293Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQN*
Ga0065705_1014530633300005294Switchgrass RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQAESMDAHRSAQLGGGSLGKRE*
Ga0070670_10080237023300005331Switchgrass RhizosphereMSEEDLEVLITMDDPGEDTLEEDTFHQADGADGSRSSLPAGHASGKN*
Ga0066388_10277736423300005332Tropical Forest SoilMNEEDLEELITLDDPGEDTLEEDTFHQADKPGAHQPAGDAAGAKK*
Ga0070689_10116961023300005340Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQTDNSGALRSSQMAGDAANKEK*
Ga0070687_10050512113300005343Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHHSSQPAGDATGKKK*
Ga0070674_10143905313300005356Miscanthus RhizosphereITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0070659_10183761723300005366Corn RhizosphereVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHHSSQPAGDATGKKK*
Ga0070705_10058742723300005440Corn, Switchgrass And Miscanthus RhizosphereMSEQDLDVLITLDDPGEDELEEDTFHQADSTGVHQPGGDLPGKQK*
Ga0070705_10170313413300005440Corn, Switchgrass And Miscanthus RhizosphereMLFALKVHMSEEELEVLITLDDPGEDTLEEDTFHQADNTGAHRSPQPCGDSTK
Ga0070694_10007502923300005444Corn, Switchgrass And Miscanthus RhizosphereMSEQDLDVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0070708_10082317923300005445Corn, Switchgrass And Miscanthus RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSLQPAVDPPGK*
Ga0070708_10133411113300005445Corn, Switchgrass And Miscanthus RhizosphereMSDLEALITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAAGKM*
Ga0068867_10029106023300005459Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTDVHQPGGDLPGKQK*
Ga0070706_10122027923300005467Corn, Switchgrass And Miscanthus RhizosphereMSEEDLEALITLDDPGEDTLEEDTFHHADNTGAHRSSEPAGDAAGKQK*
Ga0070706_10133756523300005467Corn, Switchgrass And Miscanthus RhizosphereLEVNKSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAAGKM*
Ga0070707_10026464923300005468Corn, Switchgrass And Miscanthus RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSLQPAGDPPSR*
Ga0070707_10091530013300005468Corn, Switchgrass And Miscanthus RhizosphereMSEEDLEALITLDDPGEDTLEEDTFHQADNTGAHRSSEPAGDAAEKQK*
Ga0070698_10002040933300005471Corn, Switchgrass And Miscanthus RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSLQPAGDPPGR*
Ga0070699_10071648013300005518Corn, Switchgrass And Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDPPGK*
Ga0070699_10076348113300005518Corn, Switchgrass And Miscanthus RhizosphereHMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHRSLQPAGDPPGK*
Ga0070697_10016557233300005536Corn, Switchgrass And Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHRSLQPAGDPPGK*
Ga0070697_10046882233300005536Corn, Switchgrass And Miscanthus RhizosphereELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0070672_10079560133300005543Miscanthus RhizosphereMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0070696_10071135823300005546Corn, Switchgrass And Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0070696_10189246923300005546Corn, Switchgrass And Miscanthus RhizosphereLITLDDPGEDTLEEDTFHQADNTGAHRSSEPAGDAAGKKK*
Ga0070693_10008124333300005547Corn, Switchgrass And Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHRSTQPGSDPPGK*
Ga0068854_10141591023300005578Corn RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSIQSGGDPPGK*
Ga0068859_10114870733300005617Switchgrass RhizosphereMSGEDLEVLITLDDPGEESLEEDTFHQADDTGGHRSSQPARDSGEKN*
Ga0068864_10086027223300005618Switchgrass RhizosphereMSEQDLDVLITLDDPGEDDLEEDTFHQADSTGVHQPGGDLPGKQK*
Ga0068866_1004573153300005718Miscanthus RhizosphereLALEVHMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0066903_10147230223300005764Tropical Forest SoilMSEQDLELLITLDDPGEDDLEEDTFHEADGAGAHRSLQPGGDPPGKQT*
Ga0068870_1110776223300005840Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGVHQPGGDLPGKQK*
Ga0068863_10002363963300005841Switchgrass RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTSAHQPGGDLPGKQK*
Ga0068863_10226037023300005841Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSNQPAGDAAGK*
Ga0068858_10006296823300005842Switchgrass RhizosphereMLVALEVHMSEEDLEVLLTLDDPGEDTLEEDTFHQADNTGAHHSSQPAGDATGRKK*
Ga0068862_10047829023300005844Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQTDNSGALRSSQMAGDAASKEK*
Ga0075428_10174008613300006844Populus RhizosphereMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0075433_1037866613300006852Populus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSGAHQPGGDPPG*
Ga0075433_1145765713300006852Populus RhizosphereMSEQDLEVLITLDDPEEDTLEEDTFHQADNTGAHRSSQPAGDAAK*
Ga0099827_1082962523300009090Vadose Zone SoilMSEEDLEVLITLDDPGEDTLEEDTFHQADSTGADRSPQPGGDPAGKQK*
Ga0105245_1294156113300009098Miscanthus RhizosphereVGDEFVFALAVHMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0066709_10104893033300009137Grasslands SoilMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPADDAAGKK*
Ga0114129_1080467633300009147Populus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDPPGKQK*
Ga0114129_1189759223300009147Populus RhizosphereMLLELEVHMSEEDLEVLITLDDPEEDTLEEDTFHQVDNTGADRSSQPADDAAGKEK*
Ga0105243_1082804533300009148Miscanthus RhizosphereVLALEVHMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0105243_1089505423300009148Miscanthus RhizosphereHMSEEDLEVLITLDDPGEESLEEDTFHQADDTGGHRSSQPAGDSGEKN*
Ga0105243_1229993923300009148Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDLPGKQN*
Ga0075423_1056915533300009162Populus RhizosphereVGDEFIFGLEVHMSEQDLDVLITLDDPGEDDLKEDTFHQADSTGAHQPGGDLPGKQK*
Ga0105241_1233439823300009174Corn RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTGVHQPGGDLPGKQK*
Ga0105241_1253641413300009174Corn RhizosphereMSEEDLEVLITLDDPGEESLEEDTFHQADDTGGHRSSQPAGDSGEKN*
Ga0105242_1048705733300009176Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0105248_1043876133300009177Switchgrass RhizosphereMLVALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHHSSQPAGDATGRKK*
Ga0105249_1054075023300009553Switchgrass RhizosphereMSEEDLEVLITLDDPGEDDLEEDTFHQADSTAAHRTPQPGGDAAGKKK*
Ga0126374_1089832423300009792Tropical Forest SoilVHMNEQDLEVLITLDDPGEDDLEEDTFHQADGAGAHRSLQPGGDPPGKQT*
Ga0134088_1068605713300010304Grasslands SoilMGDEFVFALEVHMSEQDLEVLITLDDPGEDTLEEDTFHQADSTGADRSPQPGGDPAGKEK
Ga0126370_1053137423300010358Tropical Forest SoilMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSSQRGGDQADKQN*
Ga0126376_1001906153300010359Tropical Forest SoilMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHRSLQPGGDPPGK*
Ga0126377_1075283423300010362Tropical Forest SoilMSEQDLEVLITLDDPGEDELEEDTFHQADSTGVHRSLQPEGDPPGK*
Ga0126379_1053581013300010366Tropical Forest SoilEDEFVFALEVHMSEQDLELLITLDDPGEDELEEDHFHQADSNGAYRYPQPGIDPADKQN*
Ga0134125_1000037753300010371Terrestrial SoilMEVHMSEEELEVLITMDDPGEDTLEEDTFHQADNIGAPRSSQPAGDAPGKEK*
Ga0134125_1155856923300010371Terrestrial SoilMSEQELEVLITLDDPGEDDLEEDTFHQADSTGARPSLQPGGDLLGKQK*
Ga0134128_1169762413300010373Terrestrial SoilMSEQELEVLITLDDPGEDDLEEDTFHQADSTGVHQPGVDTPGK*
Ga0134126_1001039463300010396Terrestrial SoilMSEQDLEVLITLDDPGEDELEEDTFHQADSAGAHRSLQVGGDPPGK*
Ga0134124_1022318413300010397Terrestrial SoilMSEQELEVLITLDDPGEDELEEDTFHHADSTGAHQPGGDLPGKQK*
Ga0134124_1199498213300010397Terrestrial SoilMSEQDLDVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0126383_1001796053300010398Tropical Forest SoilMSEQDLEVLITLDDPGEDTLEEDTFHQADKTGSHRTSQSAGDAVPAPE*
Ga0126383_1156193523300010398Tropical Forest SoilMSEQDLELLITLDDPGEDELEEDHFHQADSSAYRYPQPGVDPADKQN*
Ga0134127_1108578923300010399Terrestrial SoilMSEQDLDVLITLDDPGEDELEEDTFHHADSTGAHQPGGDLPGKQK*
Ga0134122_1049198723300010400Terrestrial SoilMLLALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHQFSQAGGDAADKQK*
Ga0134122_1252451723300010400Terrestrial SoilMSEQELEVLITLDDPGEDELEEDAFHQADSTGAHRSLQPGGDPPGKQK*
Ga0134122_1334101513300010400Terrestrial SoilMSEQDLDVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDLPGKQE*
Ga0134121_1111972323300010401Terrestrial SoilMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSPQPGGDPRGEQK*
Ga0134121_1165582723300010401Terrestrial SoilDDPGEETLEEDTFHQTDNTGAHRSSQLAGDAAGKKK*
Ga0134123_1284672223300010403Terrestrial SoilMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGADPSGEQK*
Ga0137389_1156904223300012096Vadose Zone SoilMGDEFVFALEVHMSEQDLEVLITLDDPGEDTLEEDTFHQADSIGADRSPQPEGDPAGKQK
Ga0137382_1113583123300012200Vadose Zone SoilVQDEFVFALEVHMSEQDLEVLITPDDPGEDDLEEDTFHQADSAGAHRFPQPGDDPPGKQK
Ga0137399_1039898623300012203Vadose Zone SoilMGDEFVFALEVHMSEQDLEVLITLDDPGEDTLEEDTFHQADSTGADRSPQPGGEPAGKQK
Ga0150985_10774689413300012212Avena Fatua RhizosphereLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK*
Ga0137361_1089124923300012362Vadose Zone SoilMSEQDLEVLITLDDPGEDALEEDTFHQADSTGADRSPQPGGDPAGKEK*
Ga0137397_1001378133300012685Vadose Zone SoilMGDEFVFALDVHMSEQDLEVLITIDDPGEDALEEDTFHQADSIGADRSTQPGGDPAGKEK
Ga0137396_1010681713300012918Vadose Zone SoilMGDEFVFALEVHMSEQDLEVLITIDDPGEDALEEDTFHQADSTGADRSPQPGGDPAGKQK
Ga0137396_1112693623300012918Vadose Zone SoilMSEEDLEVLITLDEPGEDTLEEDTFHQTDNTGAHRSSQPAGDAAGKEVIARRR*
Ga0137394_1155285713300012922Vadose Zone SoilITMDDPGEDTLEEDTFHQTDNTGAPQSSQPAGDAAGKQK*
Ga0137416_1079918913300012927Vadose Zone SoilMGDEFVLALEVHMSEEDLDVLITLDDPGEDTLEEDTFHQADNTGGHRSSQPAGDAAGKQK
Ga0137404_1000160353300012929Vadose Zone SoilMSEEDLEVLITLDDPGEDTLEEDSFHQADNTGAHRSSQPADDAAGKKK*
Ga0137410_1019729433300012944Vadose Zone SoilMSEEDLEVLITLDDPGEDTLEEDTFHQTENTGAHRSSQPAGDAAGKEATAQRR*
Ga0137410_1117526923300012944Vadose Zone SoilMGDEFVFALDVHMSEQDLEVLITIDDPGEDALEEDTFHQADSIGADRSPQPGGDPGEQK*
Ga0137410_1202765313300012944Vadose Zone SoilALDVHMSEQDLEVLITIDDPGEDAPEEDTFHQADSIGADRSTQPGGDPAGKEK*
Ga0164305_1124138413300012989SoilFALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNIGAHPSNQPVGDAAGK*
Ga0157374_1076945323300013296Miscanthus RhizosphereMSLFALEVHMSEEDLEVLITLDDPGEDTLDEDTFHQADNIGAHPSNQPVGDAAGK*
Ga0157378_1024783823300013297Miscanthus RhizosphereMSEQDLEVLITLDDPGEDELGADTFHQADIGGANRAAQPGGDPGGEQK*
Ga0157378_1242625423300013297Miscanthus RhizosphereMEVHMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK*
Ga0157375_1156898323300013308Miscanthus RhizosphereMGEKSVFALEVHMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGELPGKQK*
Ga0120195_100039023300013500TerrestrialVGDEFVFALEVHMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQN*
Ga0157380_1005718843300014326Switchgrass RhizosphereMLFALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADDTGAHQSSQPAGDAAGQEK*
Ga0157377_1122789323300014745Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHRSSRPGSDPPGK*
Ga0157379_1073074723300014968Switchgrass RhizosphereMLVALEVHMSEEDLEVLITLDDPGEDTLEEDSFHQADNTGGHHSSQPAADATAKKK*
Ga0157379_1201554223300014968Switchgrass RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGALPGKQK*
Ga0137409_1046075533300015245Vadose Zone SoilMGDEFVFALEVHMSEQDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAIGKKE
Ga0132256_10371678813300015372Arabidopsis RhizosphereMLFALEVHMSEEDLEVLVTLDDPGEDTLEEDTFHQADNTVAHRSAQPASDAAGQKK*
Ga0132255_10618220613300015374Arabidopsis RhizosphereMSEEELEVLITLDDPGEDTLEEDTFHQADKTGPHRSNQPGGAADDKQ*
Ga0184604_1005865923300018000Groundwater SedimentMSEEDLEVLITLDDPGEDTLEEDTFHEADNTGAHRSSQPAGDAAGKKK
Ga0184608_1008907123300018028Groundwater SedimentMLLALEVHMSEEDLDVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAAGQKK
Ga0184621_1030156323300018054Groundwater SedimentDDPGEDTLEEDTFHQADNSGAHRSSQPAGDAAGQKK
Ga0184619_1054703913300018061Groundwater SedimentMSEEDLEVLITLDDPGEDSLEEDTFHQADNTGAHRSSQPAGDAAGKKK
Ga0184618_1007616433300018071Groundwater SedimentRLFALEVHMSEEDLEMLITLDDPGEDTLEEDTFHEADNTDAHRSSQPPGDAAGKKK
Ga0184609_1008625323300018076Groundwater SedimentMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPADDAAGKK
Ga0190274_1232321523300018476SoilMFGVEVHMSEQELEVLITLDDPGEDELEVDTFHQADSTGAHQPGGDLPGKQK
Ga0137408_126256633300019789Vadose Zone SoilMSEEDLEVLITLDDPGEDTLEEDSFHQADNTGAHRSSQPADDAAGKKK
Ga0182009_1001949843300021445SoilMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGADLNGEQK
Ga0126371_1299921413300021560Tropical Forest SoilMNEQDLEVLITLDDPGEDDLEEDTFHQADGAGAHRSLQPGGDPPGKQT
Ga0224452_109672433300022534Groundwater SedimentMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPADDAA
Ga0247664_102303223300024232SoilMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDLRGEQK
Ga0207653_1003467623300025885Corn, Switchgrass And Miscanthus RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK
Ga0207642_1000198583300025899Miscanthus RhizosphereMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK
Ga0207647_1004050843300025904Corn RhizosphereMSEQDLDVLITLDDPGEDELEEDTFHHADSTGAHQPGGDLPGKQK
Ga0207684_1068590023300025910Corn, Switchgrass And Miscanthus RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPAGDAAGKKK
Ga0207654_1099644313300025911Corn RhizosphereMSEEDLEVLITLDDPGEESLEEDTFHQADDTGGHRSSQPAGDSGDKK
Ga0207707_1119262123300025912Corn RhizosphereMSEQDLDVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQK
Ga0207646_1086246323300025922Corn, Switchgrass And Miscanthus RhizosphereMSEEDLEALITLDDPGEDTLEEDTFHQADNTGAHRSSEPAGDAAEKQK
Ga0207650_1141969623300025925Switchgrass RhizosphereMSEEDLEVLITMDDPGEDTLEEDTFHQADGADGSRSSLPAGHASGKN
Ga0207709_1000713373300025935Miscanthus RhizosphereMSEQELEVLITLDDPGEDDLEEDTFHQADSTDVHQPGGDLPGKQK
Ga0207709_1031568433300025935Miscanthus RhizosphereVEESVFALEVHMSEQDLEVLITLDDPGEDELGEDTFHQADITGANRSAQPGGDPRGEQK
Ga0207711_1027580433300025941Switchgrass RhizosphereMSEPDLEVLITLDDPGEDELGEDAFHQADITGANRSAQPGGDPRGEQK
Ga0207711_1070051513300025941Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLDEDTFHQADNIGAHPSNQPVGDAA
Ga0207712_1091058423300025961Switchgrass RhizosphereMSEEDLEVLITLDDPGEDDLEEDTFHQADSTAAHRTPQPGGDAAGKKK
Ga0207703_1033222343300026035Switchgrass RhizosphereMLVALEVHMSEEDLEVLLTLDDPGEDTLEEDTFHQADNTGAHHSSQPAGDATGRKK
Ga0207676_1042970823300026095Switchgrass RhizosphereMSEQDLDVLITLDDPGEDDLEEDTFHQADSTGVHQPGGDLPGKQK
Ga0209215_100044063300027266Forest SoilMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQ
Ga0209215_100068023300027266Forest SoilMSEEDLEVLITLDDPGEDTLEEDTFHQADNTDAHRSSQPAGDAAGK
Ga0268264_1071417413300028381Switchgrass RhizosphereMSEEDLEVLITLDDPGEDTLEEDTFHQTDNSGALRSSQMAGDAANKEK
Ga0268264_1209107923300028381Switchgrass RhizosphereMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQPGGDLPGKQN
Ga0137415_1014266923300028536Vadose Zone SoilMSEQDLEVLITLDDPGEDALEEDTFHQADSTGADRPPQPGGDPAGKQK
Ga0310886_1059980313300031562SoilMSEQDLEVLITLDDPGEDDLEEDTFHQADSTGAHPSLQPGGDWPGKCVRQTSVCRR
Ga0307469_1221128113300031720Hardwood Forest SoilMLLALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSEPAGDAAGKKK
Ga0307468_10010448633300031740Hardwood Forest SoilMSEQELEVLITLDDPGEDELEEDTFHQADSTGAHQSGSDPPG
Ga0307468_10048252223300031740Hardwood Forest SoilMLLALEVHMSEEDLEVLITLDDPGEDTLEEDTFHQADNTGAHRSSQPADDAAGKKK
Ga0307473_1155711223300031820Hardwood Forest SoilLLALEVHVSEEDLEVLITMDDPGEDTLEEDTFHQADKTGVHGSYQPAGDAADHKK
Ga0307471_10086704523300032180Hardwood Forest SoilMSEQELEVLITLDDPGEDDLEEDTFHQADSTGAHQPGGDLPGKQK
Ga0307471_10318266313300032180Hardwood Forest SoilMSEQDLDVLITLDDPGEEDLEEDTFHQADSAGAHRSPEPAGDPPGEQK
Ga0307472_10259336313300032205Hardwood Forest SoilYCGSAALLALEVHMNEEEDLEVLITLDDPGEDTLEEDTFHQTDNTGAPRSSQPAGDAAGKQK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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