Basic Information | |
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Family ID | F045816 |
Family Type | Metagenome |
Number of Sequences | 152 |
Average Sequence Length | 89 residues |
Representative Sequence | MTRETDLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGALRTLSTIATVLRVWRAWRMR |
Number of Associated Samples | 121 |
Number of Associated Scaffolds | 152 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 15.89 % |
% of genes near scaffold ends (potentially truncated) | 34.87 % |
% of genes from short scaffolds (< 2000 bps) | 85.53 % |
Associated GOLD sequencing projects | 107 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.46 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (53.289 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (8.553 % of family members) |
Environment Ontology (ENVO) | Unclassified (53.289 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (54.605 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 68.91% β-sheet: 0.00% Coil/Unstructured: 31.09% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.46 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 152 Family Scaffolds |
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PF01977 | UbiD | 34.87 |
PF07332 | Phage_holin_3_6 | 32.24 |
PF05957 | DUF883 | 12.50 |
PF04392 | ABC_sub_bind | 3.29 |
PF13561 | adh_short_C2 | 1.32 |
PF09350 | DJC28_CD | 1.32 |
PF00535 | Glycos_transf_2 | 0.66 |
PF13416 | SBP_bac_8 | 0.66 |
PF03795 | YCII | 0.66 |
COG ID | Name | Functional Category | % Frequency in 152 Family Scaffolds |
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COG0043 | 3-polyprenyl-4-hydroxybenzoate decarboxylase | Coenzyme transport and metabolism [H] | 34.87 |
COG4575 | Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family | Translation, ribosomal structure and biogenesis [J] | 12.50 |
COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 3.29 |
COG2350 | YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.66 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 53.29 % |
All Organisms | root | All Organisms | 46.71 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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2170459017|G14TP7Y01B865Z | Not Available | 655 | Open in IMG/M |
3300001213|JGIcombinedJ13530_100099265 | Not Available | 553 | Open in IMG/M |
3300001213|JGIcombinedJ13530_108480370 | Not Available | 508 | Open in IMG/M |
3300003541|JGI20214J51650_10229674 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1282 | Open in IMG/M |
3300004479|Ga0062595_100962392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia | 728 | Open in IMG/M |
3300005093|Ga0062594_100578019 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 977 | Open in IMG/M |
3300005328|Ga0070676_10482626 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 877 | Open in IMG/M |
3300005331|Ga0070670_101863653 | Not Available | 554 | Open in IMG/M |
3300005333|Ga0070677_10656279 | Not Available | 587 | Open in IMG/M |
3300005334|Ga0068869_102112340 | Not Available | 506 | Open in IMG/M |
3300005338|Ga0068868_100164951 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1832 | Open in IMG/M |
3300005340|Ga0070689_102113238 | Not Available | 516 | Open in IMG/M |
3300005347|Ga0070668_100011895 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus | 6478 | Open in IMG/M |
3300005347|Ga0070668_101650725 | Not Available | 588 | Open in IMG/M |
3300005353|Ga0070669_100196574 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 1585 | Open in IMG/M |
3300005353|Ga0070669_101158676 | Not Available | 667 | Open in IMG/M |
3300005365|Ga0070688_100232957 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 1304 | Open in IMG/M |
3300005455|Ga0070663_100617514 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 914 | Open in IMG/M |
3300005455|Ga0070663_101941462 | Not Available | 529 | Open in IMG/M |
3300005459|Ga0068867_100287474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1350 | Open in IMG/M |
3300005466|Ga0070685_11009145 | Not Available | 625 | Open in IMG/M |
3300005471|Ga0070698_101389824 | Not Available | 653 | Open in IMG/M |
3300005518|Ga0070699_101370732 | Not Available | 649 | Open in IMG/M |
3300005547|Ga0070693_100787316 | Not Available | 704 | Open in IMG/M |
3300005548|Ga0070665_102289598 | Not Available | 543 | Open in IMG/M |
3300005564|Ga0070664_101603004 | Not Available | 616 | Open in IMG/M |
3300005578|Ga0068854_100114631 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2038 | Open in IMG/M |
3300005617|Ga0068859_100376673 | Not Available | 1515 | Open in IMG/M |
3300005834|Ga0068851_10115334 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1438 | Open in IMG/M |
3300005834|Ga0068851_11120728 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 | 500 | Open in IMG/M |
3300005840|Ga0068870_10111159 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1565 | Open in IMG/M |
3300005841|Ga0068863_100032598 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 4965 | Open in IMG/M |
3300005841|Ga0068863_100133427 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 2372 | Open in IMG/M |
3300005842|Ga0068858_100411443 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1300 | Open in IMG/M |
3300005843|Ga0068860_100384675 | Not Available | 1385 | Open in IMG/M |
3300005843|Ga0068860_102673159 | Not Available | 518 | Open in IMG/M |
3300005844|Ga0068862_100320326 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium | 1431 | Open in IMG/M |
3300006056|Ga0075163_10566623 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1234 | Open in IMG/M |
3300006056|Ga0075163_10985100 | Not Available | 865 | Open in IMG/M |
3300006237|Ga0097621_101310809 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 684 | Open in IMG/M |
3300006844|Ga0075428_102266233 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 559 | Open in IMG/M |
3300006904|Ga0075424_102474076 | Not Available | 544 | Open in IMG/M |
3300009553|Ga0105249_10824554 | Not Available | 992 | Open in IMG/M |
3300009553|Ga0105249_11407093 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 769 | Open in IMG/M |
3300009789|Ga0126307_11737633 | Not Available | 507 | Open in IMG/M |
3300009868|Ga0130016_10001458 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 48886 | Open in IMG/M |
3300009870|Ga0131092_10074393 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 4238 | Open in IMG/M |
3300009870|Ga0131092_10080894 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 3990 | Open in IMG/M |
3300009870|Ga0131092_10087770 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 3766 | Open in IMG/M |
3300009870|Ga0131092_10153965 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2520 | Open in IMG/M |
3300009870|Ga0131092_10920728 | Not Available | 715 | Open in IMG/M |
3300009873|Ga0131077_10226523 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1947 | Open in IMG/M |
3300010051|Ga0133939_1028179 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 4748 | Open in IMG/M |
3300010051|Ga0133939_1112230 | Not Available | 1378 | Open in IMG/M |
3300011438|Ga0137451_1082249 | Not Available | 968 | Open in IMG/M |
3300012905|Ga0157296_10421652 | Not Available | 505 | Open in IMG/M |
3300012943|Ga0164241_11152122 | Not Available | 572 | Open in IMG/M |
3300013306|Ga0163162_10515931 | Not Available | 1325 | Open in IMG/M |
3300013306|Ga0163162_11798623 | Not Available | 700 | Open in IMG/M |
3300013306|Ga0163162_12932274 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 549 | Open in IMG/M |
3300013308|Ga0157375_10515096 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1360 | Open in IMG/M |
3300013308|Ga0157375_11514703 | Not Available | 792 | Open in IMG/M |
3300014261|Ga0075360_1020008 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 940 | Open in IMG/M |
3300014266|Ga0075359_1086296 | Not Available | 618 | Open in IMG/M |
3300014325|Ga0163163_11221931 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 814 | Open in IMG/M |
3300014325|Ga0163163_12132149 | Not Available | 620 | Open in IMG/M |
3300014326|Ga0157380_10915317 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 904 | Open in IMG/M |
3300014326|Ga0157380_11669574 | Not Available | 694 | Open in IMG/M |
3300014498|Ga0182019_10116613 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium | 1654 | Open in IMG/M |
3300014502|Ga0182021_10660415 | Not Available | 1253 | Open in IMG/M |
3300015371|Ga0132258_10105401 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 6659 | Open in IMG/M |
3300015371|Ga0132258_13908181 | All Organisms → cellular organisms → Bacteria | 1013 | Open in IMG/M |
3300015372|Ga0132256_102813483 | Not Available | 585 | Open in IMG/M |
3300017974|Ga0187777_10081754 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 2106 | Open in IMG/M |
3300018052|Ga0184638_1093778 | Not Available | 1101 | Open in IMG/M |
3300018053|Ga0184626_10016319 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2974 | Open in IMG/M |
3300018075|Ga0184632_10292629 | Not Available | 706 | Open in IMG/M |
3300018084|Ga0184629_10243684 | Not Available | 938 | Open in IMG/M |
3300018084|Ga0184629_10657582 | Not Available | 530 | Open in IMG/M |
3300018476|Ga0190274_10650444 | Not Available | 1090 | Open in IMG/M |
3300018476|Ga0190274_10789477 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 1006 | Open in IMG/M |
3300018476|Ga0190274_11561267 | Not Available | 752 | Open in IMG/M |
3300018481|Ga0190271_13785831 | Not Available | 506 | Open in IMG/M |
(restricted) 3300021517|Ga0224723_1109386 | Not Available | 868 | Open in IMG/M |
3300025315|Ga0207697_10264699 | Not Available | 761 | Open in IMG/M |
3300025321|Ga0207656_10267285 | Not Available | 841 | Open in IMG/M |
3300025893|Ga0207682_10075784 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1433 | Open in IMG/M |
3300025893|Ga0207682_10622843 | All Organisms → cellular organisms → Bacteria | 508 | Open in IMG/M |
3300025899|Ga0207642_10089552 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1516 | Open in IMG/M |
3300025901|Ga0207688_10005616 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 6819 | Open in IMG/M |
3300025907|Ga0207645_10815404 | All Organisms → cellular organisms → Bacteria | 634 | Open in IMG/M |
3300025908|Ga0207643_10403548 | Not Available | 864 | Open in IMG/M |
3300025919|Ga0207657_11460257 | Not Available | 512 | Open in IMG/M |
3300025923|Ga0207681_11097123 | Not Available | 668 | Open in IMG/M |
3300025925|Ga0207650_11162297 | Not Available | 657 | Open in IMG/M |
3300025931|Ga0207644_10544973 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 960 | Open in IMG/M |
3300025932|Ga0207690_11495476 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium | 565 | Open in IMG/M |
3300025936|Ga0207670_10134842 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium | 1814 | Open in IMG/M |
3300025938|Ga0207704_11449750 | Not Available | 589 | Open in IMG/M |
3300025942|Ga0207689_10348591 | Not Available | 1231 | Open in IMG/M |
3300025944|Ga0207661_11491227 | Not Available | 620 | Open in IMG/M |
3300025960|Ga0207651_11212028 | Not Available | 678 | Open in IMG/M |
3300025961|Ga0207712_10772238 | Not Available | 843 | Open in IMG/M |
3300025961|Ga0207712_11473143 | Not Available | 610 | Open in IMG/M |
3300026041|Ga0207639_11771400 | Not Available | 578 | Open in IMG/M |
3300026075|Ga0207708_10676680 | Not Available | 880 | Open in IMG/M |
3300026088|Ga0207641_10076148 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 2900 | Open in IMG/M |
3300026088|Ga0207641_10108652 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2455 | Open in IMG/M |
3300026089|Ga0207648_10261777 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1543 | Open in IMG/M |
3300026121|Ga0207683_10647774 | Not Available | 979 | Open in IMG/M |
3300027870|Ga0209023_10060568 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2824 | Open in IMG/M |
3300027897|Ga0209254_10107913 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2327 | Open in IMG/M |
3300027897|Ga0209254_10201762 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1589 | Open in IMG/M |
3300027899|Ga0209668_10183117 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1293 | Open in IMG/M |
3300027900|Ga0209253_10091761 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2494 | Open in IMG/M |
3300027902|Ga0209048_10320570 | Not Available | 1081 | Open in IMG/M |
3300028379|Ga0268266_10298819 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1501 | Open in IMG/M |
3300028380|Ga0268265_10123398 | All Organisms → cellular organisms → Bacteria | 2138 | Open in IMG/M |
3300028380|Ga0268265_10150707 | All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium | 1961 | Open in IMG/M |
3300028381|Ga0268264_11659606 | Not Available | 650 | Open in IMG/M |
3300028381|Ga0268264_11760587 | Not Available | 630 | Open in IMG/M |
3300028743|Ga0302262_10213636 | Not Available | 657 | Open in IMG/M |
3300028802|Ga0307503_10355959 | Not Available | 752 | Open in IMG/M |
3300028889|Ga0247827_10167919 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1183 | Open in IMG/M |
3300030114|Ga0311333_10174547 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1657 | Open in IMG/M |
3300031548|Ga0307408_100902035 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 809 | Open in IMG/M |
3300031726|Ga0302321_102272529 | Not Available | 632 | Open in IMG/M |
3300031852|Ga0307410_10315314 | Not Available | 1239 | Open in IMG/M |
3300031901|Ga0307406_11339799 | Not Available | 626 | Open in IMG/M |
3300031911|Ga0307412_10541529 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 976 | Open in IMG/M |
3300031918|Ga0311367_10525835 | Not Available | 1212 | Open in IMG/M |
3300031939|Ga0308174_10621759 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 895 | Open in IMG/M |
3300031995|Ga0307409_101668423 | Not Available | 666 | Open in IMG/M |
3300032122|Ga0310895_10442260 | All Organisms → cellular organisms → Bacteria | 644 | Open in IMG/M |
3300032143|Ga0315292_10821452 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 778 | Open in IMG/M |
3300032157|Ga0315912_11389188 | Not Available | 554 | Open in IMG/M |
3300032180|Ga0307471_103171967 | Not Available | 583 | Open in IMG/M |
3300032276|Ga0316188_10658520 | Not Available | 570 | Open in IMG/M |
3300032770|Ga0335085_11126054 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae | 839 | Open in IMG/M |
3300032829|Ga0335070_10265819 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1675 | Open in IMG/M |
3300032829|Ga0335070_10390346 | Not Available | 1333 | Open in IMG/M |
3300032893|Ga0335069_10169215 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2691 | Open in IMG/M |
3300032893|Ga0335069_12474651 | Not Available | 538 | Open in IMG/M |
3300032897|Ga0335071_10847738 | Not Available | 862 | Open in IMG/M |
3300033408|Ga0316605_11567003 | Not Available | 640 | Open in IMG/M |
3300033418|Ga0316625_100210675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1287 | Open in IMG/M |
3300033488|Ga0316621_11008432 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 621 | Open in IMG/M |
3300034157|Ga0370506_173526 | Not Available | 509 | Open in IMG/M |
3300034195|Ga0370501_0362874 | Not Available | 527 | Open in IMG/M |
3300034354|Ga0364943_0094911 | Not Available | 1036 | Open in IMG/M |
3300034417|Ga0364941_008632 | Not Available | 1861 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 8.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 7.24% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 5.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.26% |
Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 3.29% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.29% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 3.29% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 3.29% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.29% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.29% |
Activated Sludge | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge | 3.29% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.63% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.63% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 2.63% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.63% |
Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 1.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 1.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.97% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.32% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 1.32% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.32% |
Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 1.32% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 1.32% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.32% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.32% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 1.32% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.32% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.32% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.32% |
Wastewater | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater | 1.32% |
Industrial Wastewater | Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater | 1.32% |
Wastewater Effluent | Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent | 1.32% |
Freshwater And Sediment | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment | 0.66% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.66% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment | 0.66% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.66% |
Worm Burrow | Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow | 0.66% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.66% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.66% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.66% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.66% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.66% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.66% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.66% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.66% |
Switchgrass, Maize And Mischanthus Litter | Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter | 0.66% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2170459017 | Litter degradation ZMR4 | Engineered | Open in IMG/M |
3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
3300003541 | Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006056 | Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA | Engineered | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009868 | Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant | Engineered | Open in IMG/M |
3300009870 | Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant | Engineered | Open in IMG/M |
3300009873 | Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant | Engineered | Open in IMG/M |
3300010051 | Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196 | Engineered | Open in IMG/M |
3300011438 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2 | Environmental | Open in IMG/M |
3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
3300012943 | Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY) | Environmental | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014261 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1 | Environmental | Open in IMG/M |
3300014266 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1 | Environmental | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014498 | Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG | Environmental | Open in IMG/M |
3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017974 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018053 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1 | Environmental | Open in IMG/M |
3300018075 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1 | Environmental | Open in IMG/M |
3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300021517 (restricted) | Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaG | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027870 | Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes) | Environmental | Open in IMG/M |
3300027897 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes) | Environmental | Open in IMG/M |
3300027899 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes) | Environmental | Open in IMG/M |
3300027900 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes) | Environmental | Open in IMG/M |
3300027902 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028743 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4 | Environmental | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300028889 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2 | Environmental | Open in IMG/M |
3300030114 | I_Fen_E2 coassembly | Environmental | Open in IMG/M |
3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
3300031726 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1 | Environmental | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300031918 | III_Fen_N3 coassembly | Environmental | Open in IMG/M |
3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
3300032143 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0 | Environmental | Open in IMG/M |
3300032157 | Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032276 | Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
3300032897 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5 | Environmental | Open in IMG/M |
3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
3300033418 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A | Environmental | Open in IMG/M |
3300033488 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C | Environmental | Open in IMG/M |
3300034157 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18 | Environmental | Open in IMG/M |
3300034195 | Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17 | Environmental | Open in IMG/M |
3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
3300034417 | Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
4ZMR_01360840 | 2170459017 | Switchgrass, Maize And Mischanthus Litter | MTRETDLAERKARLIAQSDLQRMQALLAWHSARRIIAAPAPAERSQASRSIAATLIGLALPLFGAGRMRGALRTLSTIATVLRVWRA |
JGIcombinedJ13530_1000992652 | 3300001213 | Wetland | AQSDLQRMQAMLAWHEAKRIVSPPAPAARSQASRSIATTLIGLALPLVGGGRLRRLLRTLSLAATALRVFRAWRAN* |
JGIcombinedJ13530_1084803702 | 3300001213 | Wetland | AQSDLQRMQALLAFHAARRAVSPPPPAERSAASRSIATALIGLALPLVGGGRLRRTLRTLSLAATALRVFRAWRAG* |
JGI20214J51650_102296742 | 3300003541 | Wetland | MTPATNLSERKARLIAQSDLQRMQAMLAWHEAKRIVSPPAPAARSQASRSIATTLIGLALPLVGGGRLRRLLRTLSLAATALRVFRAWRAN* |
Ga0062595_1009623922 | 3300004479 | Soil | MTRVQDLAERKARLIAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGLALPLFGGARLGRVVRVLSTAATLLRVFVAWRAR* |
Ga0062594_1005780191 | 3300005093 | Soil | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070676_104826261 | 3300005328 | Miscanthus Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0070670_1018636532 | 3300005331 | Switchgrass Rhizosphere | MSAARPDISERKARLVAQSDLHRMQALLAWHAARRIVSPPAPAERSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070677_106562792 | 3300005333 | Miscanthus Rhizosphere | VAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0068869_1021123401 | 3300005334 | Miscanthus Rhizosphere | LIAQSDLQRMQALLAWHSARRIIAPPAPAERSQVSRSIATTLIGIALPLFGAGRMRGALRTVSTIATVLRVWRAWRMR* |
Ga0068868_1001649512 | 3300005338 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070689_1021132381 | 3300005340 | Switchgrass Rhizosphere | MTTEADLAERKARLVAQSDLQRMQALLAWHAARRIIAPPAPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0070668_1000118956 | 3300005347 | Switchgrass Rhizosphere | VSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIATVLRIWRAWRAR* |
Ga0070668_1016507251 | 3300005347 | Switchgrass Rhizosphere | ERKARLVAQSDLHRMQALLAWHAAKRSIAPPAPAERSGASRSIAATIIGIALPLLGAGRMRGALRPLSTIAMVLRIWRAWRARG* |
Ga0070669_1001965743 | 3300005353 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPAPAERSQTSRSIATTLIGIALPLFGAGRMKGAMRTMSTIATLLRVYRAWRARG* |
Ga0070669_1011586762 | 3300005353 | Switchgrass Rhizosphere | MNRAHDLAERKARLIAQSDLQRMQALLAWHSAKRIISPPPPAARSAASRSIAATLIGIALPLFGGARLGRVVRTLSTAATLFRVFVAWRAR* |
Ga0070688_1002329573 | 3300005365 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0070663_1006175142 | 3300005455 | Corn Rhizosphere | MTTSADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070663_1019414622 | 3300005455 | Corn Rhizosphere | VKSANDLAERKARLIAQSDVQRMQALLAWHAARKIVSPLPAGQRSARSRSIAVTLMGLAVPLLGAGKMRNALRTLSLVATGWRLFRSWRAR* |
Ga0068867_1002874742 | 3300005459 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGTSRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070685_110091452 | 3300005466 | Switchgrass Rhizosphere | MTTSADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0070698_1013898241 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRAQDLAERKARLIAQSDLQRMQALLAWHSIRRIISPPPPPARSKASRSIAATLIGIALPLFGGRRLGRVVRTLSTAATVLRVFTAWRAR* |
Ga0070699_1013707321 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRVQDLAERKARLIAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGIALPLFGGARLGRVVRVLSTGATLFRVFFAWRAR* |
Ga0070693_1007873161 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTTDISERKARLVAQSDLHRMQALLAWHAARRAIAPPAPAQRSGASRSVAAGIIGLALPLFGAGRLRGPLRTLSTVATVLRVWRAWRARG* |
Ga0070665_1022895982 | 3300005548 | Switchgrass Rhizosphere | MTKEADLAERKARLIAQSDLQRMQAMLAWHSARRIIAPPRAADRNPVARSIATTLIGMALPLFGPGRMRSILRTFSIVATGLRLFRSWRAR* |
Ga0070664_1016030041 | 3300005564 | Corn Rhizosphere | ADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0068854_1001146311 | 3300005578 | Corn Rhizosphere | ADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAAIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0068859_1003766732 | 3300005617 | Switchgrass Rhizosphere | MTTEADLAERKARLVAQSDLQRMQALLAWHAARRIIAPPAPAERSQTSRSIATTLIGIALPLFGAGRMKGAMRTMSTIATLLRVYRAWRARG* |
Ga0068851_101153342 | 3300005834 | Corn Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAAIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0068851_111207281 | 3300005834 | Corn Rhizosphere | MTTSAEISERKARLVAQSDLHRMQALLAWHAARKIVSPLPAGQRSARSRSIAVTLMGLAVPLLGAGKMRNALRTLSL |
Ga0068870_101111592 | 3300005840 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTIAPPAPAQRSGASRSVAAGIIGLALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0068863_1000325983 | 3300005841 | Switchgrass Rhizosphere | MTTEADLAERKARLVAQSDLQRMQALLAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRRG* |
Ga0068863_1001334276 | 3300005841 | Switchgrass Rhizosphere | MTRETDLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGALRTLSTIATVLRVWRAWRMR* |
Ga0068858_1004114432 | 3300005842 | Switchgrass Rhizosphere | MTKEADLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQVSRSIATTLIGIALPLFGAGRMRGALRTLSTIATVLRVWRAWRMR* |
Ga0068860_1003846751 | 3300005843 | Switchgrass Rhizosphere | MTKEADLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQVSRSIATTLIGIALPLFGAGRMRGALRTVSTIATVLRVWRAWRMR* |
Ga0068860_1026731592 | 3300005843 | Switchgrass Rhizosphere | RMQALLAWHSAKRIISPPPPVARSAASRSIAATLIGIALPLFGGARLGRVVRTLSTAATLFRVFVAWRAR* |
Ga0068862_1003203261 | 3300005844 | Switchgrass Rhizosphere | AERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGVLRTLSTIATVLRVWRAWRMR* |
Ga0075163_105666233 | 3300006056 | Wastewater Effluent | MKSASDLAERKARLIAQSDLQRMQALLAWHAARKIISPPAPAERSASSRSIATTLIGIALPLFGPGKMRNLLRTLSIVATGLRLFRSWRAR* |
Ga0075163_109851001 | 3300006056 | Wastewater Effluent | MKSGPDLAERKARLIAQSDLQRMQALLAWHAARKIVSPPPPSQRSAASRSIATTLIGIALPLFGAGKMRNLLRTLSLVATGLRLFRSWRAR* |
Ga0097621_1013108091 | 3300006237 | Miscanthus Rhizosphere | VSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIA |
Ga0075428_1022662331 | 3300006844 | Populus Rhizosphere | MSAGTDLSERKARLVAQSDLHRMQALLAWHAARRIVAPPTPSERSGASRSIAATLIGIALPLFGIARMRGALRPLSTIATL |
Ga0075424_1024740762 | 3300006904 | Populus Rhizosphere | MSKDAELQERKARLIAQSDLQRMQALLAWHAARRIIAPPPPAERSAVSRSIATTLIGIALPLFGAGRMRGVLRTLSTIATVLRVWRAWRTR* |
Ga0105249_108245542 | 3300009553 | Switchgrass Rhizosphere | DLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0105249_114070932 | 3300009553 | Switchgrass Rhizosphere | VAQSDLQRMQALLAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGAMRTMSTIATLLRVYRAWRARG* |
Ga0126307_117376331 | 3300009789 | Serpentine Soil | ADVSERKARLVAQSDLHRMQALLAWHAVRRIIAPLAPAERSGASRSIATGIIGVALPLFGAGRMRGALRSLSTIATVLRIYRAWRARG* |
Ga0130016_1000145823 | 3300009868 | Wastewater | VKPAAELAERKARLIAQSDLQRMQALLAWHAARKIVSPPAPEERSARSRSLAATAIGIALPLFGPGRMRSLLRTLSFVATGLRLVRAWRAR* |
Ga0131092_100743936 | 3300009870 | Activated Sludge | MKPGNDLAERKARLIAQSDLQRMQALLAWHSARSIVAPPAPPERSRSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLTRLFLAWRAR* |
Ga0131092_100808946 | 3300009870 | Activated Sludge | MTPAPDLAERKARLIAQSDLQRMQALLAFHAAKRIVSPPAPAERSAASRSIATTVIGLALPLIGSRRLRGGLRWLSYLATALRVFRAWRAG* |
Ga0131092_100877707 | 3300009870 | Activated Sludge | MSTDVELSERKARLIAQSDLQRMQALLAWHAARRIVAPPSPQNRSAASRSIATTLIGIAIPLVGSGRMRSTLRTLSMVATALRVWRAWRARG* |
Ga0131092_101539656 | 3300009870 | Activated Sludge | MSSDTDISERKARLVAQSDLHRMQALLAWHSARRIVSPPSPAERSGASRSIAATIIGIALPLFGARRMRGALRPLSTIATVLRIWSAWRARG* |
Ga0131092_109207281 | 3300009870 | Activated Sludge | MHRDDLAERKARLVAQSDLQRMQAMLAWHTARRIVAPPAAGERSTMSRSMATTLIGVALPLVGAGRLRGALRTLSLVATALRIWRAWRAR* |
Ga0131077_102265231 | 3300009873 | Wastewater | MHTDDLAERKARLIAQSDLQRMQALLAWHTARRIVAPPGAGERSSTSRSIAATLIGIALPLAGAGRLRGVLRTLSVAATVLRIWRAWRVR* |
Ga0133939_10281794 | 3300010051 | Industrial Wastewater | MKPANDLAERKARLVAQSDLQRMQALLAWHAARKIISPPSPAERSARSRSVAAALIGVALPLFGPGKMRSLLRTLSLVATGVRLFRSWRAR* |
Ga0133939_11122302 | 3300010051 | Industrial Wastewater | MHKDDLAERKARLIAQSDLQRMQALLAWHTARRFVAPPGAGERSSMSRSIASTMVGFALPLVGAGRLRGALRTLSIVGAVLRIWRAWRTR* |
Ga0137451_10822492 | 3300011438 | Soil | MTRAPDLVERKARLIAQSDLQRMQALLAWHSIRRIVSPPPPPARSKASRSIAATLIGVALPLFGGRRLGRLVRTLSMAATVMRVFAAWRAR* |
Ga0157296_104216521 | 3300012905 | Soil | NEPAAELMTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0164241_111521221 | 3300012943 | Soil | VKPATELAERKARLVAQSDLQRMQALLAWHSARKIVLPLPPSQRSATSRSIAATLIGLAVPLFGPGKMRNALRTLTIIATGLRLFKAWRAR* |
Ga0163162_105159311 | 3300013306 | Switchgrass Rhizosphere | DISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0163162_117986231 | 3300013306 | Switchgrass Rhizosphere | REGPGGARTHDEAAVMTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0163162_129322742 | 3300013306 | Switchgrass Rhizosphere | VNTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIATVLRIWRAWRAR* |
Ga0157375_105150961 | 3300013308 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVL |
Ga0157375_115147032 | 3300013308 | Miscanthus Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPAPAERSQTSRSIATTLIGIALPLFGAGRMKGAMRTMSTIATLLRVYRAWRARGLRV* |
Ga0075360_10200081 | 3300014261 | Natural And Restored Wetlands | MTTPDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPPVPAERSKSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLTRLFLAWRAR* |
Ga0075359_10862961 | 3300014266 | Natural And Restored Wetlands | MKPGNDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPPAPAERSRSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLTRLFLAWRAR* |
Ga0163163_112219312 | 3300014325 | Switchgrass Rhizosphere | MTRETDLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGVLRTLSTIATVLRVWRAWRMR* |
Ga0163163_121321491 | 3300014325 | Switchgrass Rhizosphere | AQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0157380_109153173 | 3300014326 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALVAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG* |
Ga0157380_116695741 | 3300014326 | Switchgrass Rhizosphere | KARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG* |
Ga0182019_101166132 | 3300014498 | Fen | AERKAQLVAQSDLQRMQALLAWHAARRIISPPPAAERSAASRSIATTLIGIALPLVGAGRLRGVLGKLTLAATVLRVFRAWRAR* |
Ga0182021_106604151 | 3300014502 | Fen | MSRAADLAERKAQLVAQSDLQRMQALLAWHAARRIISPPPAAERSAASRSIATTLIGIALPLVGAGRLRGVLGKLTLAATVLRVFRAWRAR* |
Ga0132258_101054011 | 3300015371 | Arabidopsis Rhizosphere | VSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLST |
Ga0132258_139081812 | 3300015371 | Arabidopsis Rhizosphere | MTTAADIAERKARLIAQSDLQRMQALLAWHAARRIIAPPAPAERSAASRSIATTLIGIALPLFGAGPMRGALRKLSTIATVIRIFRAWRARSA* |
Ga0132256_1028134832 | 3300015372 | Arabidopsis Rhizosphere | VTTDTDLAERKARLIAQSDLQRMQALLAWHAARRIISPPAPAERSAASRSIATTLIGIAIPLFGAGRMKGAMRKLSTIATVLRVWRAWRARG* |
Ga0187821_100855661 | 3300017936 | Freshwater Sediment | MTDKADLAERKARLIARSDLLRMQALLAWHSARRIVSPPAPADRSPVSRSIATTLIGIALPLFGAGRIGQIEGSRGVAEAVAL |
Ga0187777_100817545 | 3300017974 | Tropical Peatland | MTRDDIAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPAERSAASRSIATTLIGIALPLFGPGRMRGALRTLSTIATVLRVWRAWRAR |
Ga0184638_10937781 | 3300018052 | Groundwater Sediment | LLAWHSIRRIVSPPPPPARSKASRSIAATLIGLALPLFGGARLGRVVRTLSMAATLLRVFTAWRAR |
Ga0184626_100163192 | 3300018053 | Groundwater Sediment | MTRAPDLAERKARLIAQSDLQRMQALLAWHSIRRIVSPPPPPARSKASRSIAATLIGLALPLFGGARLGRVVRTLSMAATLLRVFTAWRAR |
Ga0184632_102926292 | 3300018075 | Groundwater Sediment | MTRAHDLAERKARLIAQSDLQRMQALLAWHSARRIISPPPPAARSTGSRSIAATLIGIALPLFGGRRLGRLVRTLSTAATLLRVFTAWRAR |
Ga0184629_102436842 | 3300018084 | Groundwater Sediment | MSPVPDLAERKARLIAQSDLQRMQALLAWHSAKRIISPPPPPARSGVSRSIAATLIGLALPLFGGARLGRLVRRLSTAATLLRIFRAWRAR |
Ga0184629_106575822 | 3300018084 | Groundwater Sediment | MNSIQDLAERKARLIAQSDLQRMQALLAWHAAKRIISPPPPPARSGMSRSIAATLIGMALPLFGGARLGRIVRRLSTAATLLRIFRAWRAR |
Ga0190274_106504442 | 3300018476 | Soil | MTRAPDLAERKARLIAQSDLQRMQALLAWHSVRRIISPPPAPVRSKASRSIAATLIGIALPLFGGARLGRVVRILSTGATLFRVFFAWRAR |
Ga0190274_107894771 | 3300018476 | Soil | VNKQVDLSERKARLVAQSDLHRMQAMLAWHAARRIVAPPAPAQRSGASRSVAAGIIGVALPLFGAGRMRGPLRTLSTIATALRIWRA |
Ga0190274_115612671 | 3300018476 | Soil | VKPANDLAERKARLIAQSDLQRMQALLAWHAARKIISPLPAGQRSARSRSIAATLIGLAVPLFGPGKMRSTLRTLSLAATGLRLFRAWRAR |
Ga0190271_137858311 | 3300018481 | Soil | MTTETDLAERKARLVAQSDLQRMQALLAWHAAKRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTM |
(restricted) Ga0224723_11093862 | 3300021517 | Freshwater Sediment | MTRAEELAERKARLVAQSDLHRMQAMLAWHSARRIVAPPAAASRSGASRSIAAALIGVAVPLLGAGKMRGMLRTLSTLATLLRVWKAWRARA |
Ga0207697_102646991 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | PADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207656_102672852 | 3300025321 | Corn Rhizosphere | ERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207682_100757842 | 3300025893 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207682_106228432 | 3300025893 | Miscanthus Rhizosphere | VSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIATVLRIWRAWRAR |
Ga0207642_100895522 | 3300025899 | Miscanthus Rhizosphere | MTRVQDLAERKARLIAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGLALPLFGGARLGRVVRVLSTAATLLRVFVAWRAR |
Ga0207688_100056166 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207645_108154041 | 3300025907 | Miscanthus Rhizosphere | RADDEAASIVSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIATVLRIWRAWRAR |
Ga0207643_104035482 | 3300025908 | Miscanthus Rhizosphere | VSTEADLSERKARLVAQSDLHRMQALLAWHAARRTIAPPAPAQRSRASRSVAAGIIGLALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207657_114602572 | 3300025919 | Corn Rhizosphere | DISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207681_110971231 | 3300025923 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARGLRV |
Ga0207650_111622972 | 3300025925 | Switchgrass Rhizosphere | PGRHRPHDESPADLMTTSAEISERKARLVAQSDLHRMQALLAWHAARRAIAPPAPAQRSGASRSVAAGIIAVALPLFGTGRMRGAMRTLSTVATVLRVWRAWRARG |
Ga0207644_105449731 | 3300025931 | Switchgrass Rhizosphere | MTKEADLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQVSRSIATTLIGIALPLFGAGRMRGALRTLSTIATV |
Ga0207690_114954762 | 3300025932 | Corn Rhizosphere | RKARLIAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGLALPLFGGARLGRVVRVLSTAATLLRVFVAWRAR |
Ga0207670_101348422 | 3300025936 | Switchgrass Rhizosphere | MTTEADLAERKARLVAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGLALPLFGGARLGRVVRVLSTAATLLRVFVAWRAR |
Ga0207704_114497501 | 3300025938 | Miscanthus Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLL |
Ga0207689_103485911 | 3300025942 | Miscanthus Rhizosphere | ARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207661_114912271 | 3300025944 | Corn Rhizosphere | AREGPGRHRPHDESPADLMTTSAEISERKARLVAQSDLHRMQALLAWHAARRAIAPPAPAQRSGASRSVAAGIIAVALPLFGTGRMRGAMRTLSTVATVLRVWRAWRARG |
Ga0207651_112120281 | 3300025960 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIAT |
Ga0207712_107722381 | 3300025961 | Switchgrass Rhizosphere | DLADRKARLIAQSDLQRMQALLAWHSVRRIISPPPPPERSKASRSIAATLIGLALPLFGGARLGRVVRVLSTAATLLRVFVAWRAR |
Ga0207712_114731432 | 3300025961 | Switchgrass Rhizosphere | DLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207639_117714001 | 3300026041 | Corn Rhizosphere | MTTTDISERKARLVAQSDLHRMQALLAWHAARRAIAPPAPAQRSGASRSVAAGIIGLALPLFGAGRLRGPLRTLSTVATVLRVWRAWRARG |
Ga0207708_106766801 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGAMRTMSTIATLLRVYRAWRARG |
Ga0207641_100761483 | 3300026088 | Switchgrass Rhizosphere | MTRETDLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGALRTLSTIATVLRVWRAWRMR |
Ga0207641_101086522 | 3300026088 | Switchgrass Rhizosphere | MTTEADLAERKARLVAQSDLQRMQALLAWHAARRIISPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRRG |
Ga0207648_102617772 | 3300026089 | Miscanthus Rhizosphere | MTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGTSRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0207683_106477742 | 3300026121 | Miscanthus Rhizosphere | RRNRPHNEPAAELMTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGTGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0209023_100605686 | 3300027870 | Freshwater And Sediment | MTPATNLSERKARLIAQSDLQRMQAMLAWHEARRIVSPPAPAVRSQASRSIATTLIGLALPLVGSGRLRRLLRTLSLAATALRVFRAWRAN |
Ga0209254_101079132 | 3300027897 | Freshwater Lake Sediment | MTPANDLAERKARLIAQSDLQRMQAMLAWHTARRIVSPPASAERSTTSRSIATTMIGIALPLFGVGRLRGAMRTLSIAATVLRLFRAWRAR |
Ga0209254_102017622 | 3300027897 | Freshwater Lake Sediment | MKPRIDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPPAPAERSRSSWSIATTMIGIALPLFGARRLRGVLRTLSIGATLTRLFLAWRAR |
Ga0209668_101831171 | 3300027899 | Freshwater Lake Sediment | MKPGNDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPPAPAERSRSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLARLFLAWRAR |
Ga0209253_100917612 | 3300027900 | Freshwater Lake Sediment | MKPGNDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPRAPPERSQSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLARLFLAWRAR |
Ga0209048_103205702 | 3300027902 | Freshwater Lake Sediment | MTPAPDLAERKARLVAQSDLQRMQALLAWHSARHIIAPPAPAERSKASRSIAATIISLALPLAGRGRLRRVLRTLSIAATVLRVFRAWRAQ |
Ga0268266_102988192 | 3300028379 | Switchgrass Rhizosphere | HNEPAAELMTTPADISERKARLVAQSDLHRMQALLAWHAARRTLSPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTIATVLRAWRAWRARG |
Ga0268265_101233983 | 3300028380 | Switchgrass Rhizosphere | MTTETDLAERKARLVAQSDLQRMQALLAWHAARRIIAPPSPAERSQTSRSIATTLIGIALPLFGAGRMKGALRTMSTIATLLRVYRAWRARG |
Ga0268265_101507072 | 3300028380 | Switchgrass Rhizosphere | VVEAVGQETRRSVDHAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQASRSIAATLIGLALPLFGAGRMRGVLRTLSTIATVLRVWRAWRMR |
Ga0268264_116596062 | 3300028381 | Switchgrass Rhizosphere | MTKEADLAERKARLIAQSDLQRMQALLAWHSARRIIAPPAPAERSQVSRSIATTLIGIALPLFGAGRMRGALRTVSTIATVLRVWRAWRMR |
Ga0268264_117605871 | 3300028381 | Switchgrass Rhizosphere | MNRAQELAERKARLIAQSDLQRMQALLAWHSAKRIISPPPPVARSAASRSIAATLIGIALPLFGGARLGRVVRTLSTAATLFRVFVAWRAR |
Ga0302262_102136361 | 3300028743 | Fen | MTRAPDLAERKAQLVAQSDLQRMQALLAWHAARRIMSPPPPAARSAASRSVATTMIGIALPFVGAGRLRSVLRTLSIAATALRIFRAWRV |
Ga0307503_103559592 | 3300028802 | Soil | MTKGADTTERKARLVAQSDLHRMQALLAWHAARRIIAPPAPSERSGTSRTIAAGLIGIALPLFGAGRMRGALRTFSTVATVLRVWRAWRAKG |
Ga0247827_101679194 | 3300028889 | Soil | VSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTI |
Ga0311333_101745473 | 3300030114 | Fen | MTRAPDLAERKAQLVAQSDLQRMQALLAWHAARRIMSPPPPAARSAASRSVATTMIGIALPFVGAGRLRSVLRTLSIAATALRIFRAWRVR |
Ga0307408_1009020352 | 3300031548 | Rhizosphere | MTTSVDISERKARLVAQSDLHRMQALLAWHSVRRTIAPPAPAQRSGVSRSVAAGIIGLALPLFGPGRMRGALRTLSTVATVLRAWRAWRARG |
Ga0302321_1022725291 | 3300031726 | Fen | MSDASDLAERKARLVAQADLQRMQALLAWHSARRIMSPPAPAERSDRSRSVAATLLGIAVPLFGAGRLRGMLRTLSIAATILRVFRAWRMRGA |
Ga0307410_103153141 | 3300031852 | Rhizosphere | RLVAQSDLHRMQALLAWHSVRRTIAPPAPAQRSGVSRSVAAGIIGLALPLFGPGRMRGALRTLSTVATVLRAWRAWRARG |
Ga0307406_113397991 | 3300031901 | Rhizosphere | MTTSVDISERKARLVAQSDLHRMQALLAWHAARRAISPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTVATVLRAWRAWRARG |
Ga0307412_105415292 | 3300031911 | Rhizosphere | MTTSADISERKARLVAQSDLHRMQALLAWHAARRAISPPAPAQRSGASRSVAAGIIGIALPLFGAGRMRGALRTLSTVATVLRAWRAWRARG |
Ga0311367_105258352 | 3300031918 | Fen | MTRAVDLAERKARLIAQSDLQRMQALLAFYAAKRIVSPPPPAERSTASRSIATTLIGLALPLVGSGRLRRTLRTLSIAATALRVFRAWRAG |
Ga0308174_106217593 | 3300031939 | Soil | MTTSAELSERKARLVAQSDLHRMQALLAWHAARRAIAPPSPAQRSGASRSVAAGIIAVALPLFGTGRMRGALRTMSTVATVLRV |
Ga0307409_1016684232 | 3300031995 | Rhizosphere | VSADGDLGERKARLVAQSDLQRMQALLAWHAARRSIAAPAPAERSGTSRSVAAGIIGAALPLLGAGRMRGPLRTLSTIATVLRIWRAWRARG |
Ga0310895_104422602 | 3300032122 | Soil | RAREGSRGHRADDEAASIVSTEADLSERKARLVAQSDLHRMQAMLAWHAARRIIAPPAPAERSGAARTVAAGLIGLAVPLFGAGRMRGAMRTLSTIATVLRIWRAWRAR |
Ga0315292_108214522 | 3300032143 | Sediment | MKPRNDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPSAPAERSRSSWSIATTMIGIALPLFGARRLRGVLRTLSIGATLTRLFLAWRAR |
Ga0315912_113891881 | 3300032157 | Soil | MTTSLDISERKARLVAQSDLHRMQALLAWHSVRRTIAPPAPAQRSGVSRSVAAGIIGLALPLFGQGRMRGALRTLST |
Ga0307471_1031719672 | 3300032180 | Hardwood Forest Soil | MTRPQDLAERKARLIAQSDLQRMQALLAWHSAKRIISPPPPAARSRASRSIAATLIGIALPLFGGARLGRVVRTLSTGATLFRIFRAWRAR |
Ga0316188_106585202 | 3300032276 | Worm Burrow | MKPRTDLAERKARLIAQSDLQRMQALLAWHTARSIVAPPAPAERSRSSWSIATTMIGLALPLFGARRLRGVVRTLSIGATLTRLFLAWRAR |
Ga0335085_111260542 | 3300032770 | Soil | MTRDADLAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPAERSAASRSIATTLIGIALPLFGPGRMRGALRTLSTIATVIRVWRAWRMR |
Ga0335070_102658191 | 3300032829 | Soil | MKSDDLAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPADRSAASRSIATTLIGIALPLFGPRRMRGALRTLSTLATVLRVWRAWRVR |
Ga0335070_103903461 | 3300032829 | Soil | AERKARLIAQSDLQRMQALLAWHSARRIVAPPAPADRSAASRSIATTLIGVALPLFGPGRMRGALRTLSTIATVLRVWRAWRAR |
Ga0335069_101692154 | 3300032893 | Soil | MKSDDLAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPADRSAASRSIATTLIGVALPLFGPGRMRGALRTLSTIATVLRVWRAWRAR |
Ga0335069_124746511 | 3300032893 | Soil | MKSDDLAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPAERSAASRSIATTLISIALPLFGPGRMRGALRTLSTIATVLRLWRAWRVR |
Ga0335071_108477382 | 3300032897 | Soil | AVAHDEPATFVMKSDDLAERKARLIAQSDLQRMQALLAWHSARRIVAPPAPAERSAASRSIATTLIGIALPLFGPGRMRGALRTLSTIATVLRVWRAWRAR |
Ga0316605_115670032 | 3300033408 | Soil | MKPGNDLAERKARLIAQSDLQRMQALLAWHTARSIVAPPAPPERSRSSWSVATTMIGIALPLFGARRLRGVVRTLSIGATLTRLFLAWRAR |
Ga0316625_1002106752 | 3300033418 | Soil | MTPGNDLAERKARLIAQSDLQRMQAMLAWHTARRIVSPPAPAERSATSRSIATTMIGIALPLFGARRLRGVVRTLSIGATLARLFFAWRAR |
Ga0316621_110084321 | 3300033488 | Soil | MTPGNDLAERKARLIAQSDLQRMQAMLAWHTARSIVAPPAPAERSRSSWSIATTMIGIALPLFGARRLRGVVRTLSIGATLTRLFLAWRA |
Ga0370506_173526_115_390 | 3300034157 | Untreated Peat Soil | MTRAADLAERKARLIAQSDLQRMQALLAFHAARRIISPPAPAERSSASRSIATTLIGLALPLVGSGRLRRTLRTLSIAATALRLFRAWRAG |
Ga0370501_0362874_57_332 | 3300034195 | Untreated Peat Soil | MSRAADLAERKAQLVAQSDLQRMQALLAWHAARRIISPPPAAERSAASRSIATTLIGIALPLVGAGRLRGVLGKLTLAATVLRVFRAWRAR |
Ga0364943_0094911_479_754 | 3300034354 | Sediment | MNSIQDLAERKARLIAQSDLQRMQALLAWHAAKRIISPPPPPARSGMSRSIAATLIGLALPLFGGARLGRIVRRLSTAATLLRIFRAWRAR |
Ga0364941_008632_1032_1307 | 3300034417 | Sediment | MNSIQDLAERKARLIAQSDLQRMQALLAWHSAKRIISPPPPPARSGMSRSIAATLIGMALPLFGGARLGRIVRRLSTAATLLRIFRAWRAR |
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