Metagenome / Metatranscriptome Family F045909

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045909
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	69 residues
Representative Sequence	VNRPRAADDFATIRARMEELRREREGAQAAESDLQRDAPTHGARTVRWPPSELDAGLARVRQSGSGRG
Number of Associated Samples	105
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.33 %
% of genes near scaffold ends (potentially truncated)	34.87 %
% of genes from short scaffolds (< 2000 bps)	93.42 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.105 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.263 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.395 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.71% β-sheet: 0.00% Coil/Unstructured: 57.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF02586	SRAP	3.95
PF01381	HTH_3	3.29
PF07452	CHRD	1.32
PF00106	adh_short	0.66
PF00486	Trans_reg_C	0.66
PF09557	DUF2382	0.66
PF00296	Bac_luciferase	0.66
PF00083	Sugar_tr	0.66
PF01527	HTH_Tnp_1	0.66
PF01545	Cation_efflux	0.66
PF00355	Rieske	0.66
PF00561	Abhydrolase_1	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.95
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.66
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.66
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.66
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
All Organisms	root	All Organisms	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
cellular organisms	root	All Organisms → cellular organisms	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.03 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.66 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.66 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.97 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.66 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401CHBR7	Not Available	506	Open in IMG/M
3300000789\|JGI1027J11758_10841623	Not Available	529	Open in IMG/M
3300002245\|JGIcombinedJ26739_100288458	All Organisms → cellular organisms → Bacteria → Proteobacteria	1526	Open in IMG/M
3300002245\|JGIcombinedJ26739_101887208	Not Available	500	Open in IMG/M
3300002568\|C688J35102_120418559	Not Available	1054	Open in IMG/M
3300003505\|JGIcombinedJ51221_10129713	Not Available	1013	Open in IMG/M
3300003505\|JGIcombinedJ51221_10367846	Not Available	584	Open in IMG/M
3300004081\|Ga0063454_100499370	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300004082\|Ga0062384_101219110	Not Available	548	Open in IMG/M
3300004152\|Ga0062386_101654840	Not Available	534	Open in IMG/M
3300005167\|Ga0066672_10416395	Not Available	879	Open in IMG/M
3300005171\|Ga0066677_10247220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300005171\|Ga0066677_10298429	Not Available	920	Open in IMG/M
3300005176\|Ga0066679_11000065	Not Available	521	Open in IMG/M
3300005177\|Ga0066690_10235320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1226	Open in IMG/M
3300005178\|Ga0066688_10218287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1214	Open in IMG/M
3300005434\|Ga0070709_10122660	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005435\|Ga0070714_100673535	Not Available	997	Open in IMG/M
3300005435\|Ga0070714_101339731	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005436\|Ga0070713_100532920	Not Available	1111	Open in IMG/M
3300005436\|Ga0070713_100577994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300005437\|Ga0070710_10169067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1361	Open in IMG/M
3300005437\|Ga0070710_10417563	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005437\|Ga0070710_10690151	Not Available	719	Open in IMG/M
3300005439\|Ga0070711_100241468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1412	Open in IMG/M
3300005439\|Ga0070711_100341340	Not Available	1202	Open in IMG/M
3300005451\|Ga0066681_10541868	Not Available	719	Open in IMG/M
3300005451\|Ga0066681_10709043	Not Available	612	Open in IMG/M
3300005560\|Ga0066670_10306820	Not Available	966	Open in IMG/M
3300005561\|Ga0066699_10357783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1043	Open in IMG/M
3300005566\|Ga0066693_10310319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300005568\|Ga0066703_10250571	Not Available	1075	Open in IMG/M
3300005569\|Ga0066705_10386390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300005575\|Ga0066702_10980282	Not Available	506	Open in IMG/M
3300005576\|Ga0066708_10818338	Not Available	584	Open in IMG/M
3300005921\|Ga0070766_10046202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2431	Open in IMG/M
3300005921\|Ga0070766_10817076	Not Available	636	Open in IMG/M
3300006175\|Ga0070712_100568608	Not Available	957	Open in IMG/M
3300006175\|Ga0070712_100627311	Not Available	912	Open in IMG/M
3300006176\|Ga0070765_101066745	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300006755\|Ga0079222_12213370	Not Available	547	Open in IMG/M
3300006794\|Ga0066658_10253127	Not Available	942	Open in IMG/M
3300006794\|Ga0066658_10318424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300006797\|Ga0066659_10550671	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006800\|Ga0066660_10094337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2100	Open in IMG/M
3300006800\|Ga0066660_10553157	Not Available	965	Open in IMG/M
3300006800\|Ga0066660_11470879	Not Available	535	Open in IMG/M
3300006893\|Ga0073928_10049215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3817	Open in IMG/M
3300006893\|Ga0073928_10363631	Not Available	1068	Open in IMG/M
3300007788\|Ga0099795_10196947	Not Available	848	Open in IMG/M
3300009137\|Ga0066709_102148374	Not Available	771	Open in IMG/M
3300009143\|Ga0099792_10696702	Not Available	657	Open in IMG/M
3300009143\|Ga0099792_10722479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300010362\|Ga0126377_13452717	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_12081618	Not Available	655	Open in IMG/M
3300011120\|Ga0150983_12421290	Not Available	610	Open in IMG/M
3300011120\|Ga0150983_14813107	Not Available	580	Open in IMG/M
3300011120\|Ga0150983_15892108	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300012198\|Ga0137364_10233123	Not Available	1356	Open in IMG/M
3300012198\|Ga0137364_10492126	Not Available	922	Open in IMG/M
3300012212\|Ga0150985_101283111	Not Available	1062	Open in IMG/M
3300012212\|Ga0150985_109259504	Not Available	1590	Open in IMG/M
3300012212\|Ga0150985_123040388	Not Available	932	Open in IMG/M
3300012469\|Ga0150984_101051715	Not Available	697	Open in IMG/M
3300012469\|Ga0150984_109918289	Not Available	620	Open in IMG/M
3300012469\|Ga0150984_123128435	Not Available	541	Open in IMG/M
3300016319\|Ga0182033_11247605	Not Available	667	Open in IMG/M
3300018431\|Ga0066655_10413365	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300018468\|Ga0066662_10374816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1237	Open in IMG/M
3300018468\|Ga0066662_12420874	Not Available	553	Open in IMG/M
3300020579\|Ga0210407_10356774	Not Available	1144	Open in IMG/M
3300020579\|Ga0210407_11295306	Not Available	544	Open in IMG/M
3300020580\|Ga0210403_10249412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1456	Open in IMG/M
3300020580\|Ga0210403_10251561	Not Available	1450	Open in IMG/M
3300020580\|Ga0210403_10459887	Not Available	1036	Open in IMG/M
3300020581\|Ga0210399_10801408	Not Available	769	Open in IMG/M
3300020582\|Ga0210395_10680501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300020583\|Ga0210401_10414363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210	Open in IMG/M
3300020583\|Ga0210401_11302358	Not Available	584	Open in IMG/M
3300021088\|Ga0210404_10761448	Not Available	553	Open in IMG/M
3300021170\|Ga0210400_10534185	Not Available	968	Open in IMG/M
3300021178\|Ga0210408_10322884	Not Available	1231	Open in IMG/M
3300021178\|Ga0210408_10435835	Not Available	1043	Open in IMG/M
3300021178\|Ga0210408_10692559	Not Available	803	Open in IMG/M
3300021180\|Ga0210396_10087910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2818	Open in IMG/M
3300021180\|Ga0210396_10470318	Not Available	1102	Open in IMG/M
3300021362\|Ga0213882_10013124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3039	Open in IMG/M
3300021362\|Ga0213882_10420382	Not Available	566	Open in IMG/M
3300021403\|Ga0210397_10448881	Not Available	971	Open in IMG/M
3300021403\|Ga0210397_10866457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300021404\|Ga0210389_11173666	Not Available	592	Open in IMG/M
3300021405\|Ga0210387_10531187	Not Available	1046	Open in IMG/M
3300021407\|Ga0210383_11660083	Not Available	524	Open in IMG/M
3300021420\|Ga0210394_10399661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300021432\|Ga0210384_10827263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300021478\|Ga0210402_10495830	Not Available	1134	Open in IMG/M
3300021478\|Ga0210402_11695103	Not Available	558	Open in IMG/M
3300021479\|Ga0210410_10236110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1639	Open in IMG/M
3300021479\|Ga0210410_10406136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1220	Open in IMG/M
3300021479\|Ga0210410_10483815	Not Available	1106	Open in IMG/M
3300021479\|Ga0210410_11231032	Not Available	640	Open in IMG/M
3300021560\|Ga0126371_10217026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2015	Open in IMG/M
3300022525\|Ga0242656_1125284	Not Available	524	Open in IMG/M
3300022527\|Ga0242664_1144032	Not Available	522	Open in IMG/M
3300022529\|Ga0242668_1042583	Not Available	784	Open in IMG/M
3300022529\|Ga0242668_1092068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	604	Open in IMG/M
3300022532\|Ga0242655_10108506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300022532\|Ga0242655_10243169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300022557\|Ga0212123_10631215	Not Available	671	Open in IMG/M
3300022717\|Ga0242661_1098802	Not Available	608	Open in IMG/M
3300022722\|Ga0242657_1060396	Not Available	855	Open in IMG/M
3300022724\|Ga0242665_10165178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300022724\|Ga0242665_10249798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	603	Open in IMG/M
3300022724\|Ga0242665_10264543	Not Available	590	Open in IMG/M
3300024347\|Ga0179591_1031335	All Organisms → cellular organisms → Bacteria	3389	Open in IMG/M
3300024347\|Ga0179591_1206836	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300025915\|Ga0207693_10699346	Not Available	785	Open in IMG/M
3300025928\|Ga0207700_10682091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	917	Open in IMG/M
3300025929\|Ga0207664_11316319	Not Available	642	Open in IMG/M
3300026323\|Ga0209472_1297416	Not Available	516	Open in IMG/M
3300026508\|Ga0257161_1142699	Not Available	504	Open in IMG/M
3300026523\|Ga0209808_1249258	Not Available	567	Open in IMG/M
3300026542\|Ga0209805_1076805	Not Available	1618	Open in IMG/M
3300026542\|Ga0209805_1323306	Not Available	585	Open in IMG/M
3300026550\|Ga0209474_10183979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1342	Open in IMG/M
3300026551\|Ga0209648_10165562	Not Available	1729	Open in IMG/M
3300026551\|Ga0209648_10778057	Not Available	523	Open in IMG/M
3300026984\|Ga0208732_1007156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	889	Open in IMG/M
3300026998\|Ga0208369_1026166	Not Available	574	Open in IMG/M
3300027069\|Ga0208859_1008843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1096	Open in IMG/M
3300027603\|Ga0209331_1059216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300027605\|Ga0209329_1008965	Not Available	1865	Open in IMG/M
3300027635\|Ga0209625_1034631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300027812\|Ga0209656_10150814	Not Available	1165	Open in IMG/M
3300027824\|Ga0209040_10167741	Not Available	1169	Open in IMG/M
3300027884\|Ga0209275_10820929	Not Available	536	Open in IMG/M
3300027903\|Ga0209488_10780727	Not Available	678	Open in IMG/M
3300031057\|Ga0170834_110050652	Not Available	696	Open in IMG/M
3300031231\|Ga0170824_114139432	Not Available	529	Open in IMG/M
3300031474\|Ga0170818_107273637	Not Available	1009	Open in IMG/M
3300031573\|Ga0310915_11128760	Not Available	544	Open in IMG/M
3300031754\|Ga0307475_10605276	Not Available	877	Open in IMG/M
3300031781\|Ga0318547_10290398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	992	Open in IMG/M
3300031797\|Ga0318550_10367446	Not Available	697	Open in IMG/M
3300031819\|Ga0318568_10908719	Not Available	545	Open in IMG/M
3300031890\|Ga0306925_10778997	Not Available	994	Open in IMG/M
3300031962\|Ga0307479_10351049	Not Available	1458	Open in IMG/M
3300032076\|Ga0306924_12262157	Not Available	552	Open in IMG/M
3300032205\|Ga0307472_102510296	Not Available	524	Open in IMG/M
3300032205\|Ga0307472_102556757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.05%
Host-Associated	Host-Associated	3.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.45%
Aquatic	Environmental → Aquatic	4.61%
Plants	Host-Associated → Plants	3.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.13%
Freshwater	Environmental → Aquatic → Freshwater	2.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.97%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.32%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.79%
Loam	Environmental → Terrestrial → Soil → Loam	24.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.97%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.32%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.97%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.97%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.32%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300026998	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF046 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08221700	2189573004	Grass Soil	VTRPRAADDFAAIRARMKELRREREGGQAAEADMQRDPPMHRARAARWPPSEMDAGLWRVRQSGSDRD
JGI1027J11758_108416231	3300000789	Soil	MGGADVNRPRAADDFEAIRARMEELRRERERPHAGDSELKRDLAIRHARNVRWPPSEISSGAGPVRRSS*
JGIcombinedJ26739_1002884583	3300002245	Forest Soil	VSRPRAADDFATIRARMEELRRERDGAQPAEGDFQRDPPMRRAGTVRWTPSEXGXGPGRVRQSI*
JGIcombinedJ26739_1018872082	3300002245	Forest Soil	VNRPRAADDFATIRARMEELRHEREGTQAAESDLQRELPINRARGLRWPPSEIGAGPGRVRQSGSGRG*
C688J35102_1204185592	3300002568	Soil	VTRPRAADDFATIRARLEELRREREGALAAESDLHQDPPMHRARSLGRWPPAEISAGSGRVRQSGSGGG*
JGIcombinedJ51221_101297132	3300003505	Forest Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGQVRPSGSARD*
JGIcombinedJ51221_103678461	3300003505	Forest Soil	MNRPRAADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSLRWPPSEVGAGPGRVSQSRRTGFLDQFEGRA*
Ga0063454_1004993702	3300004081	Soil	GRRDVNRPRAADDFASIRARMEELRREREGAYAVDRELERDLAIRRARSARWPASETIAGPGQGRQSGPMRS*
Ga0062384_1012191101	3300004082	Bog Forest Soil	MRRPPNSTQADGGGDVTRPRAADDFTTIRARMEELRREREGAPAAECDLQQDPPMHRARSVRWPPPEIGTAPGRVYRSGSSGG*
Ga0062386_1016548401	3300004152	Bog Forest Soil	MGGADVNRPRAADDFATIRARMEELRREREGAQAAESDLQQDAPTHRARTLRWPPAEMDAGRVRQSGSGRS*
Ga0066672_104163952	3300005167	Soil	MGMGGTDVNRPRAADDFASIRARMEELRREREGTPAAESDLQRDPPMPRARTARWPPELDAGVWRANQSGSGRG
Ga0066677_102472203	3300005171	Soil	VNGPRAADDFASIRARVEELRREREGAQAAESDLPQDPPMRRGRAVRWPPAELDARLGRVRQSGSGRS*
Ga0066677_102984291	3300005171	Soil	MAQTRAADDFATIRARMEELRREREGARAAKCDLQRDPPMHPARTLRWPPAEIGAGPGRVRQSGSGRG*
Ga0066679_110000651	3300005176	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRV
Ga0066690_102353202	3300005177	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG*
Ga0066688_102182873	3300005178	Soil	MAQTRAADDFTTIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG*
Ga0070709_101226602	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGGTDVNRPRAADDFTSIRARMEELRREREGAQAAESDLQQDPPMHRARTVRWPPSELDAGPGRVRQSGSGRG*
Ga0070714_1006735351	3300005435	Agricultural Soil	VTRPRAADDFATIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS*
Ga0070714_1013397312	3300005435	Agricultural Soil	MGGTDVNRPRAADDFTSIRARMEELRREREGAQAAESDLQRDPPMPRAQTVRWPPSELDAGLGRVRQSGSGRG*
Ga0070713_1005329202	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTRAADDFATIRARMEELLRECEGAQAAKSDLQRDPPTHRTRAVRWPPSELDAGLGRVRQSGSGRG*
Ga0070713_1005779942	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AMGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAESDLQWDSPAHRARAGRWSPSESDAELGRIRQSGSGRG*
Ga0070710_101690672	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SGRQNWTKRMGGKMTRPRAADDFSAIRARMEELRRERVGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS*
Ga0070710_104175631	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGGTDVNRPRAADDFTSIRARMEELRREREGAQAAESDLQQDPPMHRARTVRWPPSELDAGPGRVRLVNVFTIE*
Ga0070710_106901512	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DDFATIRARMEELLRECEGAQAAKSDLQRDPPTHRTRAVRWPPSELDAGLGRVRQSGSGRG*
Ga0070711_1002414682	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS*
Ga0070711_1003413402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGGADVNRPRAADHFAAIRAHMKELRREREGGQAAEGDMQRDPPMHRARTARWPPSEMDAGLWRVRQSGSDRD*
Ga0066681_105418681	3300005451	Soil	VTRPRAADDFASIRARMDELRQEREGPQATESDLQRDPLLHRARSLRRAPPEIGAGLGRARPFGSGGG*
Ga0066681_107090432	3300005451	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDTGLGRVRQSGSGRG*
Ga0066670_103068201	3300005560	Soil	FAAIRARMEELRREREGAQPSQNELERELAMRRDRTVRWPPSETITEPGRVRQTGPIRS*
Ga0066699_103577833	3300005561	Soil	VNRPRAADDFATIRARMEELRREREGALAAESDLHQDPPMHRARSLGRWPPAEISAGSGRVRQSGSGGG*
Ga0066693_103103192	3300005566	Soil	VNRPRAADDFATIRARMEELRRERDGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG*
Ga0066703_102505714	3300005568	Soil	NFRTDERGGADVNGPRAADDFASIRARVEELRREREGAQAAESDLPQDPPMRRGRAVRWPPAELDARLGRVRQSGSGRS*
Ga0066705_103863903	3300005569	Soil	TEPRDQISTKRMGGDMAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG*
Ga0066702_109802821	3300005575	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDPGLGRVRQSGSGRG*
Ga0066708_108183381	3300005576	Soil	VNRPRAADDFEAIRARMEELRRERERPHAGDSELKRDLAIRHARNVRWPPSEISAGAGPVRRSS
Ga0070766_100462021	3300005921	Soil	MGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAGSDLQWASPAHRARAGRWPPSESDAELGRIRQSGSGCG*
Ga0070766_108170761	3300005921	Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAERELQQDQPMHRARSARWPPSEITAGPGQVRPSGSARD*
Ga0070712_1005686082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS*
Ga0070712_1006273112	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWQPSEITAGPGRVRPSGSARD*
Ga0070765_1010667451	3300006176	Soil	MGGAEVNRLRAADDFAVIRARMEQLRREREGAKAADSDLQWDPPAHRARAGRWPPSESDAELGRIRQSDSGRG*
Ga0079222_122133701	3300006755	Agricultural Soil	VTRPRAADDFAAIRARMEELRREREKGARTAESELERDLAIRRARSVRWPPSETIAGPGR
Ga0066658_102531273	3300006794	Soil	ERESAVIKPTTRMGGADVNRTRAADDFTTIRSRMEELRREREGARAAERDMQQDPPMHRARSLRWPPPEIGAGSGRVR*
Ga0066658_103184242	3300006794	Soil	MAQTRAADDFATIRARMEELRRERERAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG*
Ga0066659_105506712	3300006797	Soil	MGGEDVNRPRAADDFAIIRARMEELRREREGAQAAESDLQHDPPMHRARTVRWPPAELDARLGRVRQSGSGRS*
Ga0066660_100943374	3300006800	Soil	MGGADVNRPRAADDFTSIRARMEELRREREGAQAAESDLQQDPPMHRARTVRWPPAELDARLGRVRQSGSGRS*
Ga0066660_105531572	3300006800	Soil	MNRPRAADDFATIRARMEELRRERAGANAVESELERDLAIRRARSVHWSPSELSTGPGRVRQSGPIRS*
Ga0066660_114708791	3300006800	Soil	MAQTRAADDFTTIRARMEELRREREGAQAAESDLLQDAPTHRTRTARWQPSEMDARLWRVRQSGAGRD*
Ga0073928_100492157	3300006893	Iron-Sulfur Acid Spring	VTRSRAADDFAAIRARMEVLRREREVAQAAEGELKPDPAMQRARGVRWPPSEMGAGPGRVRQSGSGRG*
Ga0073928_103636311	3300006893	Iron-Sulfur Acid Spring	MSRRRDQKSANWMGGTDVTRPRAADDFATIRARMEELRRDREGAQAAESDLQQDPPMHRARTARWQPSEMDVGLWRVRQSGAGRG*
Ga0099795_101969471	3300007788	Vadose Zone Soil	MGMGGTDVNRPRAADDFATIRARMEELRREREGAQAAERDLQQDPPMHRARTVRWPPAELDARLGRVRQSGSGRS*
Ga0066709_1021483741	3300009137	Grasslands Soil	VNRPRAAADFATIRARREELRRERGGALAAESDLHQDPPMHRARSLGRWPPAEISAGSGRVRQ
Ga0099792_106967022	3300009143	Vadose Zone Soil	MTRPRIADDFATIRGLMEELRREREYPRATKSDLQRDPPPQRARSLRWPPPEIGAGLGRVRQFGSGGG*
Ga0099792_107224791	3300009143	Vadose Zone Soil	RAMGGAEVNRPRAADDFAIIHARMEQLRREREGAQAAESDLQWDSPAHRARAGRWSPSESDAEVGRIRQSGSGRG*
Ga0126377_134527171	3300010362	Tropical Forest Soil	IRARMEELRREREGAQAAESALQRDAPTHRAQTVRWPPSELDAWLGRVRQSGSGRG*
Ga0126383_120816181	3300010398	Tropical Forest Soil	DDFATIRARMEELRREREGAQAAESALQRDAPTHRARTVRWPPSELDAWLGRVRQSGSGRG*
Ga0150983_124212901	3300011120	Forest Soil	ADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS*
Ga0150983_148131072	3300011120	Forest Soil	MGGKMTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGQVRPSGSARD*
Ga0150983_153945032	3300011120	Forest Soil	VNRPRAADDFAAIRARMEDLRREREGANPSQKDAQRDPRTYRARDVRWPPSEISSGPGQVRQSGALRS*
Ga0150983_158921083	3300011120	Forest Soil	VNRPRAADDFETIRARMEELRREREGAQAAEGDLQQGAPTHRARTARWPPSEMDAELWRVRQSGAGRG*
Ga0137364_102331233	3300012198	Vadose Zone Soil	VNRPRAADDFEAIRARMEELRRERERPHAGDTELKRDLAIRHARNVRWPPSEISAGAGPVRRSS*
Ga0137364_104921263	3300012198	Vadose Zone Soil	VTRPRAADDFATIRARMEELRREREGPQATESDLQWDLLLHRARSLRWPPPEISAGSGRVRQSGSGRG*
Ga0150985_1012831111	3300012212	Avena Fatua Rhizosphere	MGMGGTDVNRPRAADDFATIRARMEELRREREGALAAESDLHQDPPMHRARSLGRWPPVEISAGSGRVRQSGSGGG*
Ga0150985_1092595041	3300012212	Avena Fatua Rhizosphere	VTRPRAADDFATIRARLEELRREREGALAAESDLHQEPPMHRARSLGRWPPAEISAGSGRVRQSG
Ga0150985_1230403881	3300012212	Avena Fatua Rhizosphere	VTRPRAADDFATIRARMEELRREREGPHAAEGELERDLAIRRARIVRWPPSETIAGPGRVRPSGTMRS*
Ga0150984_1010517151	3300012469	Avena Fatua Rhizosphere	ANDPPATKLDTSRWRGNVTRPRAADDFATIRDRMAELRRERECPQATESDLQRDLPSQRARSLRWPSPEIGAGLGRVRQSGSGGG*
Ga0150984_1099182892	3300012469	Avena Fatua Rhizosphere	ADRPATKAITEDGRRDVNRPRAADDFASIRARMEELRREREGAYAVDRELERDLAIRRARSARWPASETITGAEQGRQSGPTRS*
Ga0150984_1231284351	3300012469	Avena Fatua Rhizosphere	HNQASGDVYSRRYVTRQRAADDFATIRARVEGLRREREGAQADDSDLQRDPPMHRARSLRWPPPEIGAGSGRVRQSG*
Ga0182033_112476051	3300016319	Soil	MNRPRAADDFAAIRARMEELRRGREGAHGAERELKSGPPMYRSRNERWPPAEISPGPGQVRQSGPVRS
Ga0066655_104133651	3300018431	Grasslands Soil	NRPRAADDFATIRARMEELRRERAGANAVESELERDLAIRRARSERWSPSELSTGPGRVRQSGPIRS
Ga0066662_103748164	3300018468	Grasslands Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDAGLGRVRQSGSGRG
Ga0066662_124208741	3300018468	Grasslands Soil	VTRPRAADDFASIRARMDELRQEREGPQATESDLQRDPLLHRARSLRRPPPEIGAGLGRARPFGSGGG
Ga0210407_103567741	3300020579	Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0210407_112953061	3300020579	Soil	RPRAADDFETIRARMEELRREREGAQAAESDLQQDAPTHRARTARWQPSEMDGGLWRVRQSGAGRD
Ga0210403_102494122	3300020580	Soil	VNRPRAADDFAIIRARMEQLRREREGAQAAGSDLQWDSPAHRARAGRWPPSESDAELGRIRQSGSGRG
Ga0210403_102515612	3300020580	Soil	MTRPRAADDFATIRARMEQLRREREGAQAAEGELQQDQPTYRPRGARWPASELSQEPGRVRQSGPIRS
Ga0210403_104598873	3300020580	Soil	VNRPRAADDFATIRARLEELRQEREQVQSAESELQRDPPPRRSVRWMPSESSAGPGRVRQSGPIRG
Ga0210399_108014082	3300020581	Soil	MTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0210395_106805011	3300020582	Soil	MGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAGSDLQWASPAHRARAGRWPPSESDAELGRIRQS
Ga0210401_104143634	3300020583	Soil	VNRPRAADDFAIIRARMEQLRREREGAQAAGSDLQWASPAHRARAGRWPPSESDAELGRIRQSG
Ga0210401_113023581	3300020583	Soil	ARSRLGGNAVNRPRAADDFPTIRARLEELRREREVAQAAEGELKSDPHRARNVRWPPSEVGARAGRVSQSGLGRG
Ga0210404_107614481	3300021088	Soil	VNRPRAADDFATIRARMEELRREREGAQAAESDLQRDAPTHGARTVRWPPSELDAGLARVRQSGSGRG
Ga0210400_105341852	3300021170	Soil	MTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGIRS
Ga0210408_103228841	3300021178	Soil	MTRPRAADDFTMIRARMKELRREREGAQAAEGELQQDHPTYRPRGARWPASEFSQEPGRVRQSGPVRS
Ga0210408_103417951	3300021178	Soil	VNRPRAADDFAAIRARMEELRREREGANPSQKDAQRDPRTYRARDVRWPPSEISSGPGQVRQSGALRS
Ga0210408_104358351	3300021178	Soil	MTRPRAADDFSAIRARMEELRRGRAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0210408_106925591	3300021178	Soil	MGGADVNRPRAADDFATIRARMEELRREREGAQSAEGDLQRDPPMRRTGTVRWTPSEIGVGPGRVRQSASGRG
Ga0210396_100879105	3300021180	Soil	MGGADVNRPRAADDFATVRARIEELRRQREGAQATESDLQRDLPMHRARTVRWTPSEIGAGPGRVRQSGSGRG
Ga0210396_104703184	3300021180	Soil	MAQTRAADDFATIRARLEKLRREREGAQAAESDLQRELPIHRTRAVRWPPSELDAGLGREQDRGGLE
Ga0213882_100131242	3300021362	Exposed Rock	VNRPRAADDFATIRARMEELRQEREGAHAAKNELERDLPMRQARSVRWPPSGINTGPGRVRQSGPIRS
Ga0213882_104203821	3300021362	Exposed Rock	MEELRREREGAHATQNELERDLPMRQARSVRWPPSEISVGPGRVRQSGSIRS
Ga0210397_104488811	3300021403	Soil	MAQTRAADDFATIRARMEVLLRECEGAQAAKSDLQRDPPTHRTRAVRWPPSELDAGLGRVRQSGSGRG
Ga0210397_108664571	3300021403	Soil	VSRPRAADDFATIRARMEELRRERDGAQPAEGDFQRDPPMRRAGTVRWTPSEIGAGPGRVRQSI
Ga0210389_111736661	3300021404	Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWQPSEITAGPGRVRQSGPIRS
Ga0210387_105311872	3300021405	Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGQVRPSGSARD
Ga0210383_116600831	3300021407	Soil	VNRPRAADDFAIIRARMEQLRREREGAQAAESDLQWDSPAHRARAGRWPPSESDAELGRIRQSGSGRG
Ga0210394_103996612	3300021420	Soil	VNRPRAADDFAIIRARMEQLRREREGAQAADSDLQWDSPAHRARAGRWPPSESDAELGRIRQSGSGRG
Ga0210384_108272633	3300021432	Soil	VNRPRAADDFAIIRARMEQLRREREGAQAAESDLQWDSPAHRARAGRWSPSESDAELGRIRQSGSGR
Ga0210402_104958301	3300021478	Soil	MGGNAVNRPRAADDFPTIRARLEELRRERKGTQTAESELQGDPARRGRSVRWPPSEMSAGSGLVRQSGPIRG
Ga0210402_116951032	3300021478	Soil	MTRPRAADDFATIRARMEQLRREREGAQAAEGELQQDQPTYRPRGARWPASEFSQEPGRVRQSGPIRS
Ga0210410_102361101	3300021479	Soil	MGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAGSDLQWDSPAHRARAGRWPPSESDAELGRIRQSGSGRG
Ga0210410_104061364	3300021479	Soil	PRAADDFATIRARMEELRRERDGAQPAEGDFQRDPPMRRAGTVRWTPSEIGAGPGRVRQS
Ga0210410_104838151	3300021479	Soil	VNRPRAADDFPTIRARLEELRREREVAQAAEGELKSDPHRARNVRWPPSEVGARAGRVSQSGLGRG
Ga0210410_112310321	3300021479	Soil	MGGNVTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0126371_102170262	3300021560	Tropical Forest Soil	VNQPRAADDFATIRARMEELRREREGAHAAESDLHRAPPTSRAGNVQWRPSEVSAGPGRGRQSGPIRS
Ga0242656_11252841	3300022525	Soil	SSGRQNWTKRMGGKMTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0242664_11440321	3300022527	Soil	DFATVRARMEELRHEREGTQAAKSDLQRELPINRARGLRWPPSEIGAGAGAGPTIRFRP
Ga0242668_10425832	3300022529	Soil	MGGKMTRPRAADDFSAIRARMEELRRERAGVQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0242668_10920682	3300022529	Soil	VTRPRAADDFATIRARMEELRREREGAQAAERDLQREPPMRRAGTVRWTSSEIGVGPGRVRQSALSCH
Ga0242655_101085061	3300022532	Soil	GRQNWTKRMGGKMTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0242655_102431692	3300022532	Soil	SPAISGPWGRDQILTRAMGGAEVNPPLAADDFAIIRTRMEQLRREREGAQAAGSDLQWDSPAHRARAGRWPPSESDAELGRIRQSGSGRG
Ga0212123_106312151	3300022557	Iron-Sulfur Acid Spring	ANWMGGTDVTRPRAADDFATIRARMEELRRDREGAQAAESDLQQDPPMHRARTARWQPSEMDVGLWRVRQSGAGRG
Ga0242661_10988021	3300022717	Soil	RDQILTRAMGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAEGDLQWDSPAHRARAGRWSPSESDAELGRIRQSGSGRG
Ga0242657_10603961	3300022722	Soil	TKRMGGKMTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGQVRPSGSARD
Ga0242665_101651782	3300022724	Soil	VSPPRAADDFATIRARMEELRRERDGAQPAEGDFQRDPPMRRAGTVRWTPSEIGAGPGRVRQSI
Ga0242665_102497982	3300022724	Soil	MNRPRAADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSLRWPPSEVGAGPGRVSQSRRTGFLDQFEGRA
Ga0242665_102645431	3300022724	Soil	GKMTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWQPSEITAGPGRVRQSGPIRS
Ga0179591_10313354	3300024347	Vadose Zone Soil	VNRPRAADDFATIRARMEELRREREGALAAESDLHQDPPMHRARSLGRWPPAEISAGSGRVRQSGSGGG
Ga0179591_12068364	3300024347	Vadose Zone Soil	VTRPRAADDFATIRARMEELRRERECSQPTESDLQRDQPSHRARSLRWPPSEIGALPARVRQAGAPRS
Ga0207693_106993462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWQPSEITAGPGRVRPSGSARD
Ga0207700_106820912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRLQNSTKRMGGKMTRPRAADDFSAIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0207664_113163191	3300025929	Agricultural Soil	VTRPRAADDFATIRARMEELRRERAGAQAAESDLRDPPMHRDRSERWPPSEISAGTGRVRQSGPIRS
Ga0209472_12974161	3300026323	Soil	PGTEPRDQISTKRMGGDMAQTRAADDFAIIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDTGLGRVRQSGSGRG
Ga0257161_11426991	3300026508	Soil	VSRPRAADDFATIRARMEELRRERERTQAAESDLQREPPINRARAVRCPPSELDAGLWRVRQSG
Ga0209808_12492581	3300026523	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDTGLGRVRQSGSGCG
Ga0209805_10768051	3300026542	Soil	RAADDFASIRARVEELRREREGAQAAESDLPQDPPMRRGRAVRWPPAELDARLGRVRQSGSGRS
Ga0209805_13233062	3300026542	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDTGLGRVRQSGSGRG
Ga0209474_101839791	3300026550	Soil	MAQTRAADDFATIRARMEELRREREGAQAPESDLQRDLPNHRARTGRWQPSELDPGLGRVRQSGSGRG
Ga0209648_101655621	3300026551	Grasslands Soil	VNRPRAADDFATIRARIEELRHEREGMQAAESDLQRELPINRARGFHWPPSEIGAGSGRVRQSGPMRS
Ga0209648_107780572	3300026551	Grasslands Soil	VNRPRAADDFATIRARMEELRRECEGAQAAEGDMQRDPPTHRARTARWPPSEMDAGLWR
Ga0208732_10071562	3300026984	Forest Soil	PRAADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSLRWPPSEVGAGPGRVSQSRRTGFLDQFEGRA
Ga0208369_10261661	3300026998	Forest Soil	VNRPRAADDFAIIRARMEQLRREREGAQAADSDLQWDSPAHRARAGRWPPSESDAELGRSRQSGSGRG
Ga0208859_10088433	3300027069	Forest Soil	AADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSLRWPPSEVGAGPGRVSQSRRTGFLDQFEGRA
Ga0209331_10592161	3300027603	Forest Soil	VNRARAADDFTTIRARMEELRREREGALAAESDLQWDSPAHRARAGRWPSSESDAELGRIRQSGSGCG
Ga0209329_10089651	3300027605	Forest Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGRVRQSGPMRS
Ga0209625_10346312	3300027635	Forest Soil	VNRPRAADDFATIRARMEELRHEREGTQAAESDLQRELPINRARGLRWPPSEVGAGPGRVRQSGSGRG
Ga0209656_101508141	3300027812	Bog Forest Soil	VNRPRAADDFATIRARMKELRREREGAQAAESDLQQDAPTHRARTLRWPPAEMDAGRVRQSGSGRS
Ga0209040_101677412	3300027824	Bog Forest Soil	VNRPRAADDFATIRARMEELRREREGAQAAESDLQQDAPTHRARTLRWPPAEMDAGRVRQSGSGRS
Ga0209275_108209291	3300027884	Soil	MNRPRAADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSLRWPPSEVGAGPGRVSQSRR
Ga0209488_107807271	3300027903	Vadose Zone Soil	VNRPRAADDFTTIRARMEELRREREGAQAAECDLQRDAPMHRARSLGQWPPSEIRAEAGRVRQSSSRGG
Ga0170834_1100506521	3300031057	Forest Soil	MTRPRAADDFSAIRARMEELRRERDGAHAAESELQQDQPMHRARSARWPPSEITAGPGQVRPSGSVRD
Ga0170824_1141394321	3300031231	Forest Soil	RDQILTRAMGGAEVNRPRAADDFAIIRARMEQLRREREGAQAAEGDLQWDSPAHRARAGRWSPSDAELGRIRQSGSGRG
Ga0170818_1072736371	3300031474	Forest Soil	VSRPRAADEFATIRARMEELRREREGAQSAESDLEQDPPMHRARTARWPPSEMDEGLWRVRQSGSGRG
Ga0310915_111287601	3300031573	Soil	MGGADVNRHRAADDFATIRARMEVLRREREVAQAAEGELKPDPAMQRARSVRWSPSAIAVGPGRLRQSRSGRG
Ga0307475_106052762	3300031754	Hardwood Forest Soil	VNRPRAADDFATIRARMEELRREAEGAQAAESDLQRDAPTHRARSVRWPPSEIAAGPGRLRQSGLG
Ga0318547_102903981	3300031781	Soil	MNRPRAADDFAAIRARMEELRREREGAHAAESELKSGPPMYRSRNELWPPAEISPGPGQVRQSGAVRS
Ga0318550_103674461	3300031797	Soil	MGGNMNRPRAADDFAAIRARMEELRREREGAHAAESELKSGPPMYRSRNERWPPAEISPGPGQVRQSGAVRS
Ga0318568_109087191	3300031819	Soil	MNRPRAADDFAAIRARMEELRREREGAHAAESELKSGPPMYRSRNERWPPAEISPGPGQVRQSGAVRS
Ga0306925_107789971	3300031890	Soil	MNRPRAADDFAAIRARMEELRREREGAHAAESELKSGPPMYRSRNERWPPAEISPGPGQVRQSGPVRS
Ga0307479_103510491	3300031962	Hardwood Forest Soil	FATIRARMEELRREREGAQAAESDLQRDAPTHRARSVRWPPSEIAAGPGRLRQSGSGRD
Ga0306924_122621571	3300032076	Soil	RMGGNMNRPRAADDFAAIRARMEELRREREGAHAAESELKSGPPMYRSRNERWPPAEISPGPGQVRQSGAVRS
Ga0307472_1025102962	3300032205	Hardwood Forest Soil	ILTYGMGGADVNRPRAADDFAAIRARMKELRREREGGQAAEGDMQRDPPMHRARTARWPPSEMDAGLWRVRQSGSDRD
Ga0307472_1025567571	3300032205	Hardwood Forest Soil	VNRPRAADDFAIIRARMEQLRREREGAQAAESDLQWDSPAHRARAGRWSPSESDAVLGRIRQSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences