Metagenome Family F046039

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046039
Family Type	Metagenome
Number of Sequences	152
Average Sequence Length	40 residues
Representative Sequence	MSQLTFNLQPDRRSLTVSELTARIRDLLAKNFTDILVEGE
Number of Associated Samples	130
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.47 %
% of genes near scaffold ends (potentially truncated)	96.71 %
% of genes from short scaffolds (< 2000 bps)	86.18 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.921 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.632 % of family members)
Environment Ontology (ENVO)	Unclassified (32.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.368 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.06% β-sheet: 0.00% Coil/Unstructured: 77.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF11146	DUF2905	11.84
PF00210	Ferritin	6.58
PF01546	Peptidase_M20	5.26
PF00549	Ligase_CoA	1.97
PF02652	Lactate_perm	1.97
PF00334	NDK	1.97
PF01850	PIN	1.97
PF00248	Aldo_ket_red	1.97
PF12704	MacB_PCD	1.32
PF07722	Peptidase_C26	0.66
PF09335	SNARE_assoc	0.66
PF01909	NTP_transf_2	0.66
PF00288	GHMP_kinases_N	0.66
PF13742	tRNA_anti_2	0.66
PF08448	PAS_4	0.66
PF14534	DUF4440	0.66
PF02629	CoA_binding	0.66
PF00069	Pkinase	0.66
PF02518	HATPase_c	0.66
PF04014	MazE_antitoxin	0.66
PF01047	MarR	0.66
PF13411	MerR_1	0.66
PF06827	zf-FPG_IleRS	0.66
PF04011	LemA	0.66
PF00072	Response_reg	0.66
PF00106	adh_short	0.66
PF02604	PhdYeFM_antitox	0.66
PF13458	Peripla_BP_6	0.66
PF09278	MerR-DNA-bind	0.66
PF02601	Exonuc_VII_L	0.66
PF06831	H2TH	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.63
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	1.97
COG0074	Succinyl-CoA synthetase, alpha subunit	Energy production and conversion [C]	1.97
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	1.97
COG1620	L-lactate permease	Energy production and conversion [C]	1.97
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.66
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.66
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.66
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.66
COG1570	Exonuclease VII, large subunit	Replication, recombination and repair [L]	0.66
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.66
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.92 %
Unclassified	root	N/A	19.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.92 %
Unclassified	root	N/A	19.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.92 %
Unclassified	root	N/A	19.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.05 %
Unclassified	root	N/A	19.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.66 %
Unclassified	root	N/A	19.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.05 %
Unclassified	root	N/A	19.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.58 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	4.61 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.66 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.66 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.05 %
Unclassified	root	N/A	19.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.58 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	4.61 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.66 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.66 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.66 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.05 %
Unclassified	root	N/A	19.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.58 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	4.61 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.66 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.66 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.66 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_102629558	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1042869	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300000955\|JGI1027J12803_100107646	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300004092\|Ga0062389_102731925	Not Available	658	Open in IMG/M
3300005167\|Ga0066672_10010083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4506	Open in IMG/M
3300005445\|Ga0070708_102121578	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005467\|Ga0070706_101755149	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005545\|Ga0070695_100699464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300005560\|Ga0066670_10522274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300005586\|Ga0066691_10131975	All Organisms → cellular organisms → Bacteria → Acidobacteria	1426	Open in IMG/M
3300005764\|Ga0066903_103468457	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005841\|Ga0068863_100040640	All Organisms → cellular organisms → Bacteria	4422	Open in IMG/M
3300005843\|Ga0068860_101684325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300006163\|Ga0070715_10604782	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300006173\|Ga0070716_101030999	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300006797\|Ga0066659_10837193	Not Available	764	Open in IMG/M
3300006797\|Ga0066659_11920972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300007255\|Ga0099791_10503987	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009038\|Ga0099829_10571413	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300009088\|Ga0099830_11118193	Not Available	653	Open in IMG/M
3300009089\|Ga0099828_10253501	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300009090\|Ga0099827_11661386	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300009137\|Ga0066709_100854037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1323	Open in IMG/M
3300009524\|Ga0116225_1522467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	527	Open in IMG/M
3300010043\|Ga0126380_10497634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300010048\|Ga0126373_10892529	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300010048\|Ga0126373_10919718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300010304\|Ga0134088_10411383	Not Available	660	Open in IMG/M
3300010339\|Ga0074046_10078039	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300010360\|Ga0126372_10941836	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300010361\|Ga0126378_10649868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300010361\|Ga0126378_11528559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	757	Open in IMG/M
3300010376\|Ga0126381_102995466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300010379\|Ga0136449_101549327	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300010398\|Ga0126383_10711948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300011270\|Ga0137391_10745349	Not Available	811	Open in IMG/M
3300011270\|Ga0137391_10780401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300011271\|Ga0137393_11181957	Not Available	649	Open in IMG/M
3300012198\|Ga0137364_10622912	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012198\|Ga0137364_11176247	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300012199\|Ga0137383_11351978	Not Available	506	Open in IMG/M
3300012201\|Ga0137365_10610734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300012202\|Ga0137363_10124935	All Organisms → cellular organisms → Bacteria → Acidobacteria	1990	Open in IMG/M
3300012210\|Ga0137378_11490763	Not Available	588	Open in IMG/M
3300012349\|Ga0137387_10134251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1753	Open in IMG/M
3300012351\|Ga0137386_10276862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300012351\|Ga0137386_10938550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012356\|Ga0137371_11053307	Not Available	614	Open in IMG/M
3300012357\|Ga0137384_10171667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1815	Open in IMG/M
3300012362\|Ga0137361_11006612	Not Available	753	Open in IMG/M
3300012582\|Ga0137358_10215899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300012582\|Ga0137358_10297222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1096	Open in IMG/M
3300012683\|Ga0137398_10605788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300012683\|Ga0137398_11143217	Not Available	534	Open in IMG/M
3300012685\|Ga0137397_10660122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300012685\|Ga0137397_11111727	Not Available	575	Open in IMG/M
3300012918\|Ga0137396_10083169	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300012925\|Ga0137419_10611944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012929\|Ga0137404_10184448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1759	Open in IMG/M
3300012929\|Ga0137404_10843126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300012931\|Ga0153915_11063177	Not Available	944	Open in IMG/M
3300012948\|Ga0126375_10062481	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300012957\|Ga0164303_11295926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012971\|Ga0126369_10072329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3030	Open in IMG/M
3300012971\|Ga0126369_10757429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300014154\|Ga0134075_10041154	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300014169\|Ga0181531_10045375	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300015053\|Ga0137405_1264413	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300015054\|Ga0137420_1186916	All Organisms → cellular organisms → Bacteria → Acidobacteria	1975	Open in IMG/M
3300015241\|Ga0137418_10229577	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300015242\|Ga0137412_10680732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300015245\|Ga0137409_11286850	Not Available	573	Open in IMG/M
3300015356\|Ga0134073_10048749	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300015374\|Ga0132255_100213738	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300016341\|Ga0182035_10081354	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300016371\|Ga0182034_10753556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	831	Open in IMG/M
3300016371\|Ga0182034_11436507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300016371\|Ga0182034_11942841	Not Available	520	Open in IMG/M
3300016445\|Ga0182038_10401599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1149	Open in IMG/M
3300017822\|Ga0187802_10424038	Not Available	528	Open in IMG/M
3300017933\|Ga0187801_10020096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2264	Open in IMG/M
3300017972\|Ga0187781_10347394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300017995\|Ga0187816_10348378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	654	Open in IMG/M
3300018086\|Ga0187769_10713278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	758	Open in IMG/M
3300018433\|Ga0066667_10907954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300020004\|Ga0193755_1006902	All Organisms → cellular organisms → Bacteria → Proteobacteria	3684	Open in IMG/M
3300020579\|Ga0210407_11010757	Not Available	634	Open in IMG/M
3300020579\|Ga0210407_11164280	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300020579\|Ga0210407_11194667	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300020581\|Ga0210399_10143897	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300020581\|Ga0210399_10330264	Not Available	1273	Open in IMG/M
3300020581\|Ga0210399_10332844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1268	Open in IMG/M
3300021088\|Ga0210404_10543887	Not Available	658	Open in IMG/M
3300021168\|Ga0210406_10212297	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300021170\|Ga0210400_11224546	Not Available	604	Open in IMG/M
3300021171\|Ga0210405_10963461	Not Available	645	Open in IMG/M
3300021180\|Ga0210396_11091824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	672	Open in IMG/M
3300021401\|Ga0210393_10084375	All Organisms → cellular organisms → Bacteria → Acidobacteria	2519	Open in IMG/M
3300021405\|Ga0210387_10869553	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300021420\|Ga0210394_10222966	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300021475\|Ga0210392_11376249	Not Available	528	Open in IMG/M
3300021477\|Ga0210398_11282267	Not Available	576	Open in IMG/M
3300021559\|Ga0210409_11344491	Not Available	590	Open in IMG/M
3300024246\|Ga0247680_1048247	Not Available	618	Open in IMG/M
3300024310\|Ga0247681_1010923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300024330\|Ga0137417_1334062	Not Available	3553	Open in IMG/M
3300024330\|Ga0137417_1360790	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300024331\|Ga0247668_1054257	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300025922\|Ga0207646_10159724	All Organisms → cellular organisms → Bacteria → Acidobacteria	2033	Open in IMG/M
3300025939\|Ga0207665_10681505	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300026296\|Ga0209235_1218850	Not Available	620	Open in IMG/M
3300026319\|Ga0209647_1216110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300026322\|Ga0209687_1148370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300026469\|Ga0257169_1029613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300026551\|Ga0209648_10101833	All Organisms → cellular organisms → Bacteria → Acidobacteria	2351	Open in IMG/M
3300026557\|Ga0179587_11005710	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300027045\|Ga0207726_1037939	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300027671\|Ga0209588_1009170	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300027826\|Ga0209060_10223267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	865	Open in IMG/M
3300027846\|Ga0209180_10136149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1412	Open in IMG/M
3300027875\|Ga0209283_10735471	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027875\|Ga0209283_10887942	Not Available	540	Open in IMG/M
3300027905\|Ga0209415_10068418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4256	Open in IMG/M
3300027911\|Ga0209698_10799598	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300028281\|Ga0247689_1070929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300028381\|Ga0268264_10362157	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300028906\|Ga0308309_10310248	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300031057\|Ga0170834_101839124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300031128\|Ga0170823_15152813	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300031231\|Ga0170824_109138050	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031446\|Ga0170820_15643872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031544\|Ga0318534_10475938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	714	Open in IMG/M
3300031708\|Ga0310686_102619035	Not Available	548	Open in IMG/M
3300031708\|Ga0310686_103451522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	777	Open in IMG/M
3300031718\|Ga0307474_10011357	All Organisms → cellular organisms → Bacteria	6452	Open in IMG/M
3300031720\|Ga0307469_10256551	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300031820\|Ga0307473_10590672	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300031897\|Ga0318520_10868444	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031910\|Ga0306923_11048494	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031941\|Ga0310912_10475473	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031941\|Ga0310912_11209189	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031947\|Ga0310909_10488481	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300031962\|Ga0307479_10549931	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300032076\|Ga0306924_10742709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300032174\|Ga0307470_11918646	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300032180\|Ga0307471_100483078	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300032180\|Ga0307471_104328949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300032261\|Ga0306920_102898201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	650	Open in IMG/M
3300032828\|Ga0335080_10032891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5677	Open in IMG/M
3300032892\|Ga0335081_10855975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	1078	Open in IMG/M
3300032893\|Ga0335069_10077842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	4246	Open in IMG/M
3300033983\|Ga0371488_0091581	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.37%
Host-Associated	Host-Associated	2.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.76%
Aquatic	Environmental → Aquatic	4.61%
Plants	Host-Associated → Plants	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.11%
Freshwater	Environmental → Aquatic → Freshwater	3.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%
Sediment	Environmental → Aquatic → Sediment	0.66%
Peat	Environmental → Terrestrial → Peat	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.92%
Loam	Environmental → Terrestrial → Soil → Loam	7.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.66%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.66%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.66%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1026295581	3300000559	Soil	MSQLTFNLQPERRSLTVSELTARIRDLLARNFIDVLVEGEISN
AP72_2010_repI_A10DRAFT_10428692	3300000651	Forest Soil	MSQLMFNLQPERRSLTVSELTARIRDLLAKNFVDVLVEGE
JGI1027J12803_1001076461	3300000955	Soil	MGQLTFNLQPERRSLTVGELTARIRDLLAKNFVDVLVEGEISNCRE
Ga0062389_1027319251	3300004092	Bog Forest Soil	VSQLQFNLIPEKKIWTVSELTGRIRELLAAAFPGIWVEGE
Ga0066672_100100831	3300005167	Soil	MTQQLTFNLMPTRHTFTVSELTGKIRDLLAKNFTDISVQGEISNCRA
Ga0070708_1021215781	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLATMSQLTFNLQPERRSLTVTELTSRIRDLLAKNFTDI
Ga0070706_1017551492	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRHETMSQLTFNLQPERRSLTVTELTSRIRDLLAKNFTDI
Ga0070695_1006994643	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLQFNLRPERRIFSVTELTGSIRDLFTRNFTDIFVEGEISNCHAA
Ga0066670_105222741	3300005560	Soil	MAQLQFNLMPERRVWSVSELTARVRDLLGRSFTDI
Ga0066691_101319755	3300005586	Soil	MTQQLTFNMMPDRKTWTVSELTGKIRDLLAKNFTDIS
Ga0066903_1034684571	3300005764	Tropical Forest Soil	MGQLTFNLQPDRRSLTVSELTARIRDLFAKSFVNVLVEGEISNCR
Ga0068863_1000406405	3300005841	Switchgrass Rhizosphere	MGQLTFNLQPERRSLTVSELTARIRDLLAKNFVDV
Ga0068860_1016843251	3300005843	Switchgrass Rhizosphere	MSQLTFNLQPERRSLTVSELTARVRDLLAKNFIDVLVE
Ga0070715_106047822	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLTFNLQPDRRSLTVSELTARIRDLLAKNFTEIQVEGE
Ga0070716_1010309991	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTEQLTFDLMPERRAWTVSELTLKIRDLLARNFTGI
Ga0066659_108371933	3300006797	Soil	MTQQLAFNLQPTRHTFTVSELTGKIRDLLAKNFTDISVQGEIS
Ga0066659_119209721	3300006797	Soil	MTEQLTFNLMPDRKTWTVSELTGKIRDLLAKNFTDISVQGE
Ga0099791_105039871	3300007255	Vadose Zone Soil	MTQQLTFNLMPDRKTFTVSELTGKIRDLLAKNFTDISVQGEVSNC
Ga0099829_105714134	3300009038	Vadose Zone Soil	VDGSKTQLTFNLQPERRIYTVSDLTARIRELLAKNFT
Ga0099830_111181931	3300009088	Vadose Zone Soil	MSQLQFNLMPDRRAFTVTELTAKIRDLFAGNFTDIW
Ga0099828_102535013	3300009089	Vadose Zone Soil	MTQLTFNLMPEKRIWTVSELTARIRDLLAKNFTDISV
Ga0099827_116613862	3300009090	Vadose Zone Soil	MTQQLTFNLMPNRKTWTVSELTGKIRDLLVKNFTDIS
Ga0066709_1008540373	3300009137	Grasslands Soil	MTQQLSFNLMPGRKTFTVSELTGKIRDLLAKNFTDISVQGEISNCR*
Ga0116225_15224671	3300009524	Peatlands Soil	MDQLQLNLQPERRVFTVSDLTARIRDLLAKNFTDISV
Ga0126380_104976341	3300010043	Tropical Forest Soil	MGQLTFNLQPERRSITVSELTARIRDLLARNFVDVL
Ga0126373_108925291	3300010048	Tropical Forest Soil	MGQLTFNLQPERRMYTVSDLTARIRELLAKNFTDVTVQGEISNCR
Ga0126373_109197181	3300010048	Tropical Forest Soil	MSTQFQLNLMPERRVWTVTELTGRIRDLFTRNFTDIWVE
Ga0134088_104113832	3300010304	Grasslands Soil	MTRQLTFNLMPDRKTWTVSELTGKIRDLLAKNFTDISVQ
Ga0074046_100780391	3300010339	Bog Forest Soil	MDQLQLNLQPERRVFTVSDLTARIRDLLAKNFTDI
Ga0126372_109418362	3300010360	Tropical Forest Soil	MSQLTFNLQPTRTVLTVSELTARVRDLLAKNFFDIFVQGE
Ga0126378_106498682	3300010361	Tropical Forest Soil	MSQLTFNLQPTRTVLTVSELTARIRDLLARNFTDIFVQGEI
Ga0126378_115285592	3300010361	Tropical Forest Soil	VDISNAQLTFNLQPERRVYTVSDLTARLRDLLAKNFT
Ga0126381_1029954661	3300010376	Tropical Forest Soil	MSQLTFNLQPARRSLTVGELTARIRDLLVKNFADVLVEGEVSNCREAQ
Ga0136449_1015493273	3300010379	Peatlands Soil	MSQLTFNLQPEKRIYTVSDLTARIRDLLAKNFTDINVQGEIS
Ga0126383_107119482	3300010398	Tropical Forest Soil	MSQLTFNLQPTRQILTVSELTGRIRDLLARNFTDIFVQGEI
Ga0137391_107453491	3300011270	Vadose Zone Soil	MTEQLTFNLMPDRKTWTVSELTARIRDLLAKNFTDISVQGE
Ga0137391_107804012	3300011270	Vadose Zone Soil	MSQLTFNLQPDRRSLTVSELTAQLRDLLAKNFTDILVEGEIS
Ga0137393_111819572	3300011271	Vadose Zone Soil	MTQLQFNLMPDRRAFTVSELTAKIRDLFARNFTDIWVTGEIS
Ga0137364_106229122	3300012198	Vadose Zone Soil	LTQQLTFNLMPDRKTWTVSELTAKIRDLLSKNFTDISVQGE
Ga0137364_111762472	3300012198	Vadose Zone Soil	MTQQLTFNLMPDRKTWTVSELTAKIRDLLSKNFTDISVQGE
Ga0137383_113519781	3300012199	Vadose Zone Soil	MTQQLTFNLLPTRPVWTVSELTARIRDLLAKNFTDIS
Ga0137365_106107341	3300012201	Vadose Zone Soil	MRHATMSQLTFNLQPERRSLTVTELTSRIRDLLAKNFTEIL
Ga0137363_101249352	3300012202	Vadose Zone Soil	MSQLQFNLMPDRRAFTVTELTAKIRDLFARNFTDIWVT
Ga0137378_114907631	3300012210	Vadose Zone Soil	MTQQLTFNLLPTRPVWTVSELTARIRDLLAKNFTDISVQGEIS
Ga0137387_101342511	3300012349	Vadose Zone Soil	MTEQLTFNLMPDRKTWTVSELTGKIRDLLAKNFTDISVQGEI
Ga0137386_102768621	3300012351	Vadose Zone Soil	MTQQLTFNLMPDRKIWTVSELTAKIRDLLSKNFTDISVQGEISN
Ga0137386_109385501	3300012351	Vadose Zone Soil	MTQQLTFNLLPTRPVWTVSELTARIRDLLAKNFTDISVQGEMSKCREA
Ga0137371_110533071	3300012356	Vadose Zone Soil	MTQQLTFNLLPTRPVWTVSELTARIRDLLAKNFTDI
Ga0137384_101716671	3300012357	Vadose Zone Soil	MTRQLTFNLMPTRKTFTVSELTAKIRDLLAKNFTDISVQGEV
Ga0137361_110066122	3300012362	Vadose Zone Soil	MTQQLTFNLMPTRPVWTVSELTARIRDLLAKNFTDISVQGE
Ga0137358_102158993	3300012582	Vadose Zone Soil	MTQQLTFNLQPTRKAWTVSELTAKIRDLLAKNFTD
Ga0137358_102972223	3300012582	Vadose Zone Soil	MTRHLTFNLMPDRKTFTVSELTGKIRDLLAKNFTDISVQGEIS
Ga0137398_106057883	3300012683	Vadose Zone Soil	MSQLTFNLQPSRRALTVSELTARIRDLLTKNFTELSV
Ga0137398_111432171	3300012683	Vadose Zone Soil	MTQQLTFNLMPDRKTFTVSELTGKIRDLLAKNFTDISVQ
Ga0137397_106601221	3300012685	Vadose Zone Soil	MSQLTFNLMPERRTLSVSELTARIRDLLAKNFTDIL
Ga0137397_111117271	3300012685	Vadose Zone Soil	MAPRDMTTQLQFNLAPERRILTVSELTGKIRDLLGK
Ga0137396_100831691	3300012918	Vadose Zone Soil	MTQQLTFNLMPTRQVFTVSELTGKIRDLLAKNFTDI
Ga0137419_106119442	3300012925	Vadose Zone Soil	MSQLTFNLQPDRRAFTVSELTARIRDMLAKNFTDVAVEGE
Ga0137404_101844482	3300012929	Vadose Zone Soil	MSQLTFNLQPSRRALTVSELTARIRDLLAKNFTELSVEGEV
Ga0137404_108431262	3300012929	Vadose Zone Soil	MSQLTFNLQPDRRLLTVSELTAQLRDLLAKNFTDILVEGEISNPP
Ga0153915_110631771	3300012931	Freshwater Wetlands	MSQLTFNLMPERKTWTVSELTARIRDLLGKNFTDILVQGE
Ga0126375_100624812	3300012948	Tropical Forest Soil	MSQLTFNLQPDRRSLTVSELTARIRDLLAKNFIDVLVEGEISNCREA*
Ga0164303_112959262	3300012957	Soil	MGQLTFNLQPERRSLTVSELTARIRDLLAKNYIDVLVEGEISNCRE
Ga0126369_100723296	3300012971	Tropical Forest Soil	MSQLQFNLQPERRIYSVSDLTARIRDLLAKNFTDIVVQ
Ga0126369_107574292	3300012971	Tropical Forest Soil	MSQLQFNLRPERRVFSVSELTTSIRDLFVRNFTDILVQGE
Ga0134075_100411541	3300014154	Grasslands Soil	MSQLQFNLMPDRKVWTVSELTARIRDLLARNFTDI
Ga0181531_100453754	3300014169	Bog	MSQLTFNLMPQRRILTVSELTGKVRDLLARNFTDIWV
Ga0137405_12644134	3300015053	Vadose Zone Soil	MNQLTFNLQPERRIYTVSDLTARIRELMAKNFTDVTVQGE
Ga0137420_11869161	3300015054	Vadose Zone Soil	MTQQLSFNLMPNRKTFTVSELTGKIRDLLAKNFTEISVQVHRDQ
Ga0137418_102295774	3300015241	Vadose Zone Soil	VDASKTQLTFNLQPDRRIYTVSDLTARIRELLAKNFTDVT
Ga0137412_106807321	3300015242	Vadose Zone Soil	MSQLTFNLQPSRRALTVSELTARIRDLLAKNFTELS
Ga0137409_112868501	3300015245	Vadose Zone Soil	MTQQLTFNLMPEKRAWTVSELTAKIRDLLAKNFTD
Ga0134073_100487493	3300015356	Grasslands Soil	MTQQLTFNLMPDRKTWTVSELTAKIRDLLSKNFTDISVQGEIS
Ga0132255_1002137381	3300015374	Arabidopsis Rhizosphere	MGQLTFNLQPERRSLTVSELTARIRHLLSKNFIDV
Ga0182035_100813541	3300016341	Soil	MDQLRFNLQPERRVYTVSDLTARIRDLLARNFTDVSVQGEISNC
Ga0182034_107535561	3300016371	Soil	MSQLQFNLQPERRVFTVSDLTARIRDLLARNFMDISVQGEI
Ga0182034_114365071	3300016371	Soil	MSQLTFNLQPTRTVLTVSELTARIRDLLARNFTDIFVQGEISNCHE
Ga0182034_119428411	3300016371	Soil	MTTQLTFNLRPERRILTVSELTGKIRDLLGKNFSAILVQGEIS
Ga0182038_104015991	3300016445	Soil	MSQLQFNLQPERRVFTVSDLTARIRDLLARNFMDISVQGEISNC
Ga0187802_104240381	3300017822	Freshwater Sediment	MTTQLTFNLQPTRRALTVSELTARIRDLLGKNFTDLW
Ga0187801_100200961	3300017933	Freshwater Sediment	MNQLQFNLQPERPIFTVSDLTARIRDLLAKNFTDITVQGEISNCR
Ga0187781_103473941	3300017972	Tropical Peatland	MDQLQLNLQPERRVFTVSDLTARIRDLLAKNFNDISVQGEISN
Ga0187816_103483782	3300017995	Freshwater Sediment	MNQLQLNLQPERRVYTVSDLTARIRDLLLKNFTDISVQGEISNC
Ga0187769_107132781	3300018086	Tropical Peatland	MDQLQLNLQPERHVFTVSDLTARIRDLLAKNFTDISVQGEI
Ga0066667_109079541	3300018433	Grasslands Soil	MSQLTFNLQPTRQILSVSELTARIRDLLARNFTDIFVQGEISNCRE
Ga0193755_10069021	3300020004	Soil	MTEQLTFNLMPEKRAWTVSELTAKIRDLLAKNFTD
Ga0210407_110107571	3300020579	Soil	MTQLQFNLMPDRRAFTVTELTAKIRDLFARNLTDIWVTGE
Ga0210407_111642801	3300020579	Soil	MTTQLQFNLMPERRVWSVTELTVKIRDLLARNFTDIL
Ga0210407_111946671	3300020579	Soil	MNQLTFNLQPERRIYTVSDLTARIRELLAKNFTDVTVQGE
Ga0210399_101438971	3300020581	Soil	VDGSKTQLTFNLQPERRIYTVSDLTARIRELLAKNFTDVTV
Ga0210399_103302643	3300020581	Soil	MTQQLTFNLMPDRKTWTVSELTGKIRDLLAKNFTDITVQG
Ga0210399_103328441	3300020581	Soil	MSQLQFNLMPERRAFTVTELTARIRDLFARNFTDIW
Ga0210404_105438871	3300021088	Soil	MTQQQLTFNLMPDRKTFTVSELTGKIRDLLTKNFTDI
Ga0210406_102122971	3300021168	Soil	VDASKTQLTFNLQPERRIYTVSDLTARIRELLAKNFT
Ga0210400_112245461	3300021170	Soil	VSQLQFNLMPERRAFTVTELTARIRDLFARNFTDIWVTG
Ga0210405_109634612	3300021171	Soil	MTQLQFNLQPTRRVLTVSELTARIRDLLAKNFTDIWVV
Ga0210396_110918242	3300021180	Soil	MAMDQLQFNLQPERRVYAVSDLTARIRDLLFRNFTD
Ga0210393_100843751	3300021401	Soil	MTTQLTFNLQPTRRALTVSELTARIRDLLGKNFTDIW
Ga0210387_108695531	3300021405	Soil	MSQLQFNLMPERRVFSVSELTARIRDLLTRNFTDILAE
Ga0210394_102229661	3300021420	Soil	VDGSKTQLTFNLQPERRIYTVSDLTARIRELLAKN
Ga0210392_113762491	3300021475	Soil	MSQLQFNLMPERRVYSVTELTGRIRDLFVRNFTDILVEGEIS
Ga0210398_112822672	3300021477	Soil	MSQLTFNLMPQRRILTVSELTGKVRDLLVKNFTDILVGGEISNC
Ga0210409_113444911	3300021559	Soil	MSQLQFNLMPDRRAFTVTELTARIRDLFARNFTDI
Ga0247680_10482471	3300024246	Soil	MSQLTFNLQPTRRALTVSELTARIRDLLGKNFTDIWVEG
Ga0247681_10109231	3300024310	Soil	MGQLTFNLQPERRSLTVSELTARIRDLLAKNFVDVQVEGEISNCRE
Ga0137417_13340625	3300024330	Vadose Zone Soil	MTRQLTFNLMPDRKTFTVSELTGKIRDLLAKNFTDISVQGEISNRREAQSGTSISP
Ga0137417_13607903	3300024330	Vadose Zone Soil	MTEQLTFNLMPDRRTFTVSELTGKIRDLLAKNFTDIAVQGEVSNCGKPSPATSTSP
Ga0247668_10542571	3300024331	Soil	MGQLTFNLQPERRSLTVSELTARIRDLLAKNFVDVLV
Ga0207646_101597241	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRHTTMSQLTFNLQPERRSLTVTELTSRIRDLLAKNFT
Ga0207665_106815051	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSQLQFNLMPERRVFSVSELTGRIRDLFVRNFTDILVEGEL
Ga0209235_12188501	3300026296	Grasslands Soil	MSQLTLNLNLQPTRKAWTVSELTAKIRDLLAKNFTDI
Ga0209647_12161102	3300026319	Grasslands Soil	MSQLTFNLQPDRRAFTVSELTARIRDLLASAARAA
Ga0209687_11483701	3300026322	Soil	MTQQLTFNLMPTRKTWTVSELTGKIRDLLAKNFTDINVQGEVSN
Ga0257169_10296132	3300026469	Soil	MSQLTFNLQPDRRSLTVSELTARIRDLLAKNFTDILVEGE
Ga0209648_101018331	3300026551	Grasslands Soil	MTEQLTFNLMPDRRTFTVSELTGKIRDLLAKNFTDIR
Ga0179587_110057101	3300026557	Vadose Zone Soil	MTQQLTFNLMPDRKTFTVSELTGKIRDLLAKNFTD
Ga0207726_10379393	3300027045	Tropical Forest Soil	MDQLRFNLQPERRVYTVSDLTARIRELLARNFTDVSVQGEISN
Ga0209588_10091701	3300027671	Vadose Zone Soil	MTQQLTFNLMPDRKTWTVSELTGKIRDLLAKNFTDISVQGEISNCR
Ga0209060_102232672	3300027826	Surface Soil	VSQLQFNLMPERRVYSVTELTARIRDLFTRNFTDILVE
Ga0209180_101361491	3300027846	Vadose Zone Soil	MTQQLTFNLMPDRKTWTVSELTAKIRDLLAKNFTDI
Ga0209283_107354712	3300027875	Vadose Zone Soil	MSQLQFNLVPERKIWSVSELTARIRDLLEGNFREL
Ga0209283_108879421	3300027875	Vadose Zone Soil	MTQQLTFNLMPDRKTFTVSELTGKIRDLLAKNFTDISVQG
Ga0209415_100684181	3300027905	Peatlands Soil	MDQLQLNLQPERRVFTVSDLTARIRDLLAKNFTDIS
Ga0209698_107995981	3300027911	Watersheds	MTKQLTFNLLPARTVLTVSELTGKIRDLLVRNFTDISVIGEISNCR
Ga0247689_10709292	3300028281	Soil	MGQLTFNLQPERRSLTVSELTARIRDLLAKNFVDVQV
Ga0268264_103621573	3300028381	Switchgrass Rhizosphere	MSQLQFNLRPERRIFSVTELTGSIRDLFTRNFTDIFVEG
Ga0308309_103102483	3300028906	Soil	MYRGSASFMGQLTFNLQPERRVYTVSDLTARIRDILAKNFTDVSVTGEISNCRE
Ga0170834_1018391241	3300031057	Forest Soil	MSQLTFNLMPERRTLSVSELTARIRDLLAKNFTDILV
Ga0170823_151528131	3300031128	Forest Soil	MSQLQFNLMPERRVFSVSELTARIRDLLTRNFADIL
Ga0170824_1091380503	3300031231	Forest Soil	VDASKSQLTFNLQPERRIYTVSDLTARIRELLAKNFTDVTVQ
Ga0170820_156438722	3300031446	Forest Soil	MSQLTFNLMPERRTLSVSELTARIRDLLAKNFTDILVEG
Ga0318534_104759381	3300031544	Soil	MSQLQFNLQPERRVFTVSDLTARIRDLLARNFMDISVQGEISN
Ga0310686_1026190351	3300031708	Soil	MSQLTFNLMPDRKTWTVSELTGAIRDLLARNFTDIHVHGEISNC
Ga0310686_1034515221	3300031708	Soil	MAMDQLQFNLQPERRVYTVSDLTARIRDLLFRNFTDI
Ga0307474_1001135710	3300031718	Hardwood Forest Soil	MTMQLQFNLMPERRVWSVTELTVRIRDLLARNFADIL
Ga0307469_102565511	3300031720	Hardwood Forest Soil	MTTQLQFNLAPERRIFTVSELTGKIRDLLGKNFAGILVQGE
Ga0307473_105906721	3300031820	Hardwood Forest Soil	MSQLQFNLMPERRVFSVSELTGRIRDLFVRNFTDILVE
Ga0318520_108684441	3300031897	Soil	MEQLQFNLQPVRRIFTVSDLTARIRDLLARNFTDIIVQGEISNC
Ga0306923_110484941	3300031910	Soil	MDQLRFNLQPERRVYTVSDLTARIRDLLARNFTDV
Ga0310912_104754733	3300031941	Soil	MDQLQFNLQPERRIYTVSDLTARIRDLLARSFTDVSV
Ga0310912_112091893	3300031941	Soil	MDQLRFNLQPERRVYTVSDLTARIRDLLARNFTDVAVQG
Ga0310909_104884811	3300031947	Soil	MSQLTFNLQPDKRIYTVSDLTARIRDLLAKNFTEISVQG
Ga0307479_105499313	3300031962	Hardwood Forest Soil	MTTQLQFNLMPERRVWSVTELTVRIRDLLARNFND
Ga0306924_107427092	3300032076	Soil	MSQLTFNLQPERRSLTVSELTARIRDLLAKNFLHV
Ga0307470_119186462	3300032174	Hardwood Forest Soil	MSQLQFNLQPTRQVLTVTQLTAKIRDLLARNFTDI
Ga0307471_1004830785	3300032180	Hardwood Forest Soil	MNQLTFNLQPERRIYTVSDLTARIRELLAKNFTDVTVQ
Ga0307471_1043289491	3300032180	Hardwood Forest Soil	MSQLTFNLQPERRSLTVTELTSRIRDLLAKNFTDVLVEGE
Ga0306920_1028982011	3300032261	Soil	MGQLTFNLQPERRIYTVSDLTARIRELLAKHFTDVT
Ga0335080_100328918	3300032828	Soil	MGQLQFNLQPDRRVFTVSDLTARIRDLLARNFTDISVQGEI
Ga0335081_108559753	3300032892	Soil	MDQLQLNLQPERRIFTVSDLTARIRDLLSKNFTDIFVQGEI
Ga0335069_100778423	3300032893	Soil	VSQLQFNLMPERRVYSVTELTARIRDLFTRNFTDIFVE
Ga0371488_0091581_3_113	3300033983	Peat Soil	MDQLQLNLQPERRVFTVSDLTARIRDLLAKNFTDICV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046039

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences