Metagenome / Metatranscriptome Family F046044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	73 residues
Representative Sequence	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPAAQAASGGGAAGHMAVYCNAAPGCRSVWYRPRHEP
Number of Associated Samples	108
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.37 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	86.84 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.553 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (27.632 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.368 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.07% β-sheet: 20.20% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
b.30.2.1: Amine oxidase catalytic domain	d1oaca1	1oac	0.51476
d.81.2.2: SerA intervening domain-like	d1ygya4	1ygy	0.51447
c.60.1.0: automated matches	d2wnha1	2wnh	0.50974
b.30.2.1: Amine oxidase catalytic domain	d1w7ca1	1w7c	0.50757
b.30.2.1: Amine oxidase catalytic domain	d1rjoa1	1rjo	0.50089

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF13466	STAS_2	3.95
PF13683	rve_3	1.97
PF00294	PfkB	1.32
PF12802	MarR_2	1.32
PF00805	Pentapeptide	1.32
PF00589	Phage_integrase	1.32
PF00905	Transpeptidase	1.32
PF12697	Abhydrolase_6	1.32
PF06210	DUF1003	0.66
PF00196	GerE	0.66
PF00293	NUDIX	0.66
PF05305	DUF732	0.66
PF03167	UDG	0.66
PF01243	Putative_PNPOx	0.66
PF14659	Phage_int_SAM_3	0.66
PF06071	YchF-GTPase_C	0.66
PF13565	HTH_32	0.66
PF00392	GntR	0.66
PF14106	DUF4279	0.66
PF01638	HxlR	0.66
PF13560	HTH_31	0.66
PF07676	PD40	0.66
PF12681	Glyoxalase_2	0.66
PF08290	Hep_core_N	0.66
PF06386	GvpL_GvpF	0.66
PF13340	DUF4096	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.32
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.66
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.66
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.66
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.66
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.66
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
All Organisms	root	All Organisms	41.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
cellular organisms	root	All Organisms → cellular organisms	40.79 %
Viruses	superkingdom	All Organisms → Viruses	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.58 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.95 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.34 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.32 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.32 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.66 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.32 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.66 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.32 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.32 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.32 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0305436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	588	Open in IMG/M
3300000956\|JGI10216J12902_102722957	Not Available	1105	Open in IMG/M
3300000956\|JGI10216J12902_105680522	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300000956\|JGI10216J12902_118352110	Not Available	679	Open in IMG/M
3300004479\|Ga0062595_100555116	Not Available	881	Open in IMG/M
3300004633\|Ga0066395_10871919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005105\|Ga0066812_1014699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300005166\|Ga0066674_10477493	Not Available	565	Open in IMG/M
3300005168\|Ga0066809_10122348	Not Available	655	Open in IMG/M
3300005332\|Ga0066388_101300944	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005332\|Ga0066388_105232398	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005332\|Ga0066388_108082592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	526	Open in IMG/M
3300005339\|Ga0070660_101248573	Not Available	630	Open in IMG/M
3300005363\|Ga0008090_14620886	Not Available	962	Open in IMG/M
3300005434\|Ga0070709_10027480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3383	Open in IMG/M
3300005435\|Ga0070714_100011766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6953	Open in IMG/M
3300005435\|Ga0070714_100088396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2711	Open in IMG/M
3300005435\|Ga0070714_100110614	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300005435\|Ga0070714_100423710	Not Available	1261	Open in IMG/M
3300005436\|Ga0070713_100013587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	6019	Open in IMG/M
3300005436\|Ga0070713_100175593	Not Available	1922	Open in IMG/M
3300005439\|Ga0070711_100118330	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300005439\|Ga0070711_100125737	Not Available	1903	Open in IMG/M
3300005439\|Ga0070711_101498672	Not Available	588	Open in IMG/M
3300005450\|Ga0066682_10555239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300005451\|Ga0066681_10959621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005540\|Ga0066697_10208720	Not Available	1161	Open in IMG/M
3300005545\|Ga0070695_100524232	Not Available	920	Open in IMG/M
3300005545\|Ga0070695_101770616	Not Available	518	Open in IMG/M
3300005553\|Ga0066695_10254369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1109	Open in IMG/M
3300005569\|Ga0066705_10622725	Not Available	659	Open in IMG/M
3300005574\|Ga0066694_10529803	Not Available	549	Open in IMG/M
3300005713\|Ga0066905_100148324	Not Available	1685	Open in IMG/M
3300005713\|Ga0066905_100330494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1209	Open in IMG/M
3300005713\|Ga0066905_101471448	Not Available	619	Open in IMG/M
3300005764\|Ga0066903_100443874	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300005764\|Ga0066903_101308407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1355	Open in IMG/M
3300005764\|Ga0066903_104411191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300005764\|Ga0066903_104694008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300005764\|Ga0066903_108578936	Not Available	520	Open in IMG/M
3300006028\|Ga0070717_10005160	All Organisms → cellular organisms → Bacteria	9525	Open in IMG/M
3300006034\|Ga0066656_10482896	Not Available	808	Open in IMG/M
3300006046\|Ga0066652_100261424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520	Open in IMG/M
3300006046\|Ga0066652_100644203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1004	Open in IMG/M
3300006047\|Ga0075024_100557273	Not Available	610	Open in IMG/M
3300006050\|Ga0075028_100559210	Not Available	675	Open in IMG/M
3300006059\|Ga0075017_101268621	Not Available	578	Open in IMG/M
3300006163\|Ga0070715_10415564	Not Available	751	Open in IMG/M
3300006173\|Ga0070716_100147339	Not Available	1509	Open in IMG/M
3300006175\|Ga0070712_100234593	Not Available	1459	Open in IMG/M
3300006175\|Ga0070712_101498013	Not Available	589	Open in IMG/M
3300006572\|Ga0074051_10015262	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2616	Open in IMG/M
3300006574\|Ga0074056_10022463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1462	Open in IMG/M
3300006574\|Ga0074056_11832754	Not Available	508	Open in IMG/M
3300006575\|Ga0074053_11970946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	625	Open in IMG/M
3300006576\|Ga0074047_11136370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300006578\|Ga0074059_10010989	Not Available	537	Open in IMG/M
3300006579\|Ga0074054_12087875	Not Available	566	Open in IMG/M
3300006603\|Ga0074064_11509418	Not Available	617	Open in IMG/M
3300006606\|Ga0074062_12999051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300006755\|Ga0079222_10595802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	842	Open in IMG/M
3300006755\|Ga0079222_11031110	Not Available	712	Open in IMG/M
3300006791\|Ga0066653_10539270	Not Available	590	Open in IMG/M
3300006797\|Ga0066659_11020735	Not Available	691	Open in IMG/M
3300006804\|Ga0079221_10101831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1413	Open in IMG/M
3300006804\|Ga0079221_10192837	Not Available	1109	Open in IMG/M
3300006806\|Ga0079220_10395978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300006806\|Ga0079220_11670714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300006854\|Ga0075425_100049618	Not Available	4700	Open in IMG/M
3300006854\|Ga0075425_100089228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3493	Open in IMG/M
3300006854\|Ga0075425_100098366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3324	Open in IMG/M
3300006854\|Ga0075425_100294285	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300006871\|Ga0075434_100025925	All Organisms → cellular organisms → Bacteria	5738	Open in IMG/M
3300006871\|Ga0075434_100214943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1943	Open in IMG/M
3300006871\|Ga0075434_100934819	Not Available	882	Open in IMG/M
3300006871\|Ga0075434_100977811	Not Available	860	Open in IMG/M
3300006903\|Ga0075426_10277793	Not Available	1222	Open in IMG/M
3300006903\|Ga0075426_10526147	Not Available	880	Open in IMG/M
3300006903\|Ga0075426_11367470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300006904\|Ga0075424_100033803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5302	Open in IMG/M
3300006904\|Ga0075424_101515602	Not Available	711	Open in IMG/M
3300006904\|Ga0075424_102108054	Not Available	594	Open in IMG/M
3300006914\|Ga0075436_100453813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300007076\|Ga0075435_101527620	Not Available	586	Open in IMG/M
3300009089\|Ga0099828_10305763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1431	Open in IMG/M
3300009137\|Ga0066709_100607738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1559	Open in IMG/M
3300009137\|Ga0066709_101922822	Not Available	823	Open in IMG/M
3300009147\|Ga0114129_10521180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1550	Open in IMG/M
3300009156\|Ga0111538_12058804	Not Available	718	Open in IMG/M
3300009162\|Ga0075423_10275854	Not Available	1762	Open in IMG/M
3300010047\|Ga0126382_11038153	Not Available	721	Open in IMG/M
3300010358\|Ga0126370_10926118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300010359\|Ga0126376_11281111	Not Available	752	Open in IMG/M
3300010360\|Ga0126372_10057710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2677	Open in IMG/M
3300010360\|Ga0126372_11010755	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300010376\|Ga0126381_103401107	Not Available	626	Open in IMG/M
3300010398\|Ga0126383_10340649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1516	Open in IMG/M
3300012198\|Ga0137364_10120859	Not Available	1867	Open in IMG/M
3300012198\|Ga0137364_10746372	Not Available	739	Open in IMG/M
3300012201\|Ga0137365_10034060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3903	Open in IMG/M
3300012201\|Ga0137365_10310788	Not Available	1167	Open in IMG/M
3300012208\|Ga0137376_10510111	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1043	Open in IMG/M
3300012350\|Ga0137372_10025210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5514	Open in IMG/M
3300012350\|Ga0137372_10033278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4709	Open in IMG/M
3300012350\|Ga0137372_10157796	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1847	Open in IMG/M
3300012354\|Ga0137366_10123109	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300012354\|Ga0137366_10261649	Not Available	1280	Open in IMG/M
3300012354\|Ga0137366_10630854	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	767	Open in IMG/M
3300012356\|Ga0137371_10002780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13942	Open in IMG/M
3300012356\|Ga0137371_10092837	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300015372\|Ga0132256_103809633	Not Available	507	Open in IMG/M
3300015374\|Ga0132255_102991491	Not Available	722	Open in IMG/M
3300016270\|Ga0182036_10864956	Not Available	739	Open in IMG/M
3300016294\|Ga0182041_11888527	Not Available	555	Open in IMG/M
3300016341\|Ga0182035_10871879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	793	Open in IMG/M
3300017959\|Ga0187779_10021413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3685	Open in IMG/M
3300018060\|Ga0187765_11295815	Not Available	515	Open in IMG/M
3300018081\|Ga0184625_10660079	Not Available	506	Open in IMG/M
3300018482\|Ga0066669_10267912	Not Available	1363	Open in IMG/M
3300018482\|Ga0066669_12069103	Not Available	536	Open in IMG/M
3300019362\|Ga0173479_10459527	Not Available	631	Open in IMG/M
3300025898\|Ga0207692_10185373	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025929\|Ga0207664_10353018	Not Available	1302	Open in IMG/M
3300026067\|Ga0207678_11293401	Not Available	645	Open in IMG/M
3300026118\|Ga0207675_101558078	Not Available	681	Open in IMG/M
3300027018\|Ga0208475_1022747	Not Available	615	Open in IMG/M
3300027873\|Ga0209814_10149806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1001	Open in IMG/M
3300028768\|Ga0307280_10253243	Not Available	634	Open in IMG/M
3300028807\|Ga0307305_10368268	Not Available	651	Open in IMG/M
3300028819\|Ga0307296_10825500	Not Available	505	Open in IMG/M
3300028828\|Ga0307312_11204409	Not Available	501	Open in IMG/M
3300028884\|Ga0307308_10060476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1784	Open in IMG/M
3300028884\|Ga0307308_10248465	Not Available	852	Open in IMG/M
3300030990\|Ga0308178_1109841	Not Available	595	Open in IMG/M
3300031099\|Ga0308181_1150636	Not Available	544	Open in IMG/M
3300031421\|Ga0308194_10289726	Not Available	563	Open in IMG/M
3300031549\|Ga0318571_10212510	Not Available	697	Open in IMG/M
3300031748\|Ga0318492_10100789	Not Available	1419	Open in IMG/M
3300031764\|Ga0318535_10411039	Not Available	603	Open in IMG/M
3300031799\|Ga0318565_10514895	Not Available	577	Open in IMG/M
3300031805\|Ga0318497_10289849	Not Available	911	Open in IMG/M
3300031819\|Ga0318568_10569997	Not Available	706	Open in IMG/M
3300031897\|Ga0318520_10637432	Not Available	664	Open in IMG/M
3300031910\|Ga0306923_12018337	Not Available	585	Open in IMG/M
3300031946\|Ga0310910_10209998	Not Available	1512	Open in IMG/M
3300031954\|Ga0306926_11679114	Not Available	726	Open in IMG/M
3300031959\|Ga0318530_10364500	Not Available	599	Open in IMG/M
3300032025\|Ga0318507_10378683	Not Available	616	Open in IMG/M
3300032044\|Ga0318558_10271584	Not Available	836	Open in IMG/M
3300032054\|Ga0318570_10309573	Not Available	718	Open in IMG/M
3300032205\|Ga0307472_101763881	Not Available	613	Open in IMG/M
3300032805\|Ga0335078_11855644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.89%
Host-Associated	Host-Associated	16.45%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.26%
Plants	Host-Associated → Plants	16.45%
Aquatic	Environmental → Aquatic	2.63%
Solid Waste	Engineered → Solid Waste	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.13%
Sediment	Environmental → Aquatic → Sediment	2.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Grass	Engineered → Solid Waste → Grass	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.24%
Loam	Environmental → Terrestrial → Soil → Loam	21.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%
Composting	Engineered → Solid Waste → Grass → Composting	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.97%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.66%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03054362	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MGVRRPDWWSRFYPEHCPNGHEWGPGLIIVSWMLCDCPAAVAFGAPGPAGHLAVYCNAAPGCRSVWYRPQCDSG*
JGI10216J12902_1027229571	3300000956	Soil	MRPPDWWCYPERCANGHEWRPGLITVSWVLCDCPTVQAVRERAGGGPAGHMAVFCNAAPGCRSVW
JGI10216J12902_1056805223	3300000956	Soil	VVYPERCQNGHEWGPGLITVAWVLCDCPPAQAVRERVGGGPAGHMAVFCNAAPGCRSVWTGHV*
JGI10216J12902_1183521101	3300000956	Soil	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAVAAHGNASGAGHLLVYCGRRGCRSTWYRPRPEPGS*
Ga0062595_1005551162	3300004479	Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVVVYCATPYCRSVWYKPRHEPG*
Ga0066395_108719191	3300004633	Tropical Forest Soil	MGVKRPDWWSRYYPERCSNGHEWAPGKIIVSWMLCDCPPAQAAQTAGPAGHVAVQCATPHCQSVWYKPRHDPRA*
Ga0066812_10146992	3300005105	Soil	QRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVAVYCATPHCRSVWYKPRHEPG*
Ga0066674_104774931	3300005166	Soil	RPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAARERVGGGPAGHMAVFCNAAPRCRSVWYRPRHERAR*
Ga0066809_101223481	3300005168	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGHVSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0066388_1013009442	3300005332	Tropical Forest Soil	MGVRRPGWRCYPERCSNGHEWARLITVSWVLCDCPPAQAARERAGGGPAGHMAVFC
Ga0066388_1052323981	3300005332	Tropical Forest Soil	MGVQRPAWWSRYYPERCSNGHEWGPGRIIVSWMLCDCPPALAAQTAGPAGHVTVSCATPHCRSVWYKP
Ga0066388_1080825921	3300005332	Tropical Forest Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWVLCDCPPALAAQTAGPAGHVSVYCATPHCRS
Ga0070660_1012485731	3300005339	Corn Rhizosphere	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPALAARTPGAPAGHMAVFCNAAP
Ga0008090_146208862	3300005363	Tropical Rainforest Soil	MAVQRPGWWCYPERCSNGHEWGPGLITVSWVTCQCAPAVAYRGGYAGAGHLAVYCEASPGCRSVWTGRGTNQGTTRG*
Ga0070709_100274808	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MCSNRVVGVRRPAWWCYPERCQNGHEWGPGLIIVSWVLCDCPAAQAASGGGAAGHLAVYCRVKGCRSVWYRPRHEPGV*
Ga0070714_1000117663	3300005435	Agricultural Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPSALAAQTAGPAGHVAVYCATPHCRSVWYKPRHEPG*
Ga0070714_1000883965	3300005435	Agricultural Soil	MGVHRPAWWSRYYPERCANGHEWGPGKIIVGWVLCDCPPAVEAGSPGPAGHLAVHCAVKGCRSVWYRPRHEPTGPRMA*
Ga0070714_1001106141	3300005435	Agricultural Soil	VCSNCPVGVHRPAWWSRYYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0070714_1004237103	3300005435	Agricultural Soil	MGVRRPGWWCYPERCSNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNVKGCRSVWYRP
Ga0070713_1000135871	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LVEPVYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0070713_1001755933	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGVRRPAWWCYPERCQNGHEWGPGLIIVSWVLCDCPAAQAASGGGAAGHLAVYCRVKGCRSVWYRPRHEPGV*
Ga0070711_1001183301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VEPVYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0070711_1001257373	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVAVYCATLHCRSVWYKPRHEPG*
Ga0070711_1014986722	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WPLPSRVSPPERCANGHEWGPGLIVVSWSLCDCPSAVAASGGGAPGHLAVYCAASPGCRSMWYLPRREPEMA*
Ga0066682_105552392	3300005450	Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVSWVLCDCAPARAAQERAGGPAGHMAAFCNAAPGCRSVWYRPRHEPGN*
Ga0066681_109596211	3300005451	Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVCWVLCDCPPAQAARERAGGPAGHMAVFCNA
Ga0066697_102087202	3300005540	Soil	MRWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRPVWYRPRHEPAR*
Ga0070695_1005242321	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAAQATSGGGAAGHMAVFCNAAPGCRSVWYRPRHDPA*
Ga0070695_1017706161	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSHGVRRPGWWCYPERCSNAHEWGPGLITVSWVLCDCPAAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPRH
Ga0066695_102543691	3300005553	Soil	VGRPAWWYYPERCANGHEWGPGLITVSWSMCECPPALAARTAGPSGHLAVYCNAPGCRSVWYRPRHQPGM*
Ga0066705_106227251	3300005569	Soil	VRRPDWWCYLERCSDGHEWGPGLITVCWVLCDCPPAQAARERAGGPAGHMAVFCNAAPRCRSVWYRLAHEPGR*
Ga0066694_105298032	3300005574	Soil	SKRVMGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCAPARAAQERAGGPAGHMAAFCNAAPGCRSVWYRPRHEPAR*
Ga0066905_1001483241	3300005713	Tropical Forest Soil	VGVRRPGWWCYPERCSNGHEWGPGRIIVSWVMCDCPPARAAQERAGGPAGHMAVFCNAAPRCRSVWYRPRHEPDR*
Ga0066905_1003304941	3300005713	Tropical Forest Soil	GVQRPHWWSRYYPECCANGHEWGPGKIIVGWTLCDCPPALAAQTAGPAGHVAVYCATPHCRSIWYKPRHEPG*
Ga0066905_1014714482	3300005713	Tropical Forest Soil	MHQYETEWARTYVLIVPMGVRRPDWWSRFYPERCASGHEWGPGKIIVSWVLCDCPPAQASSGAGPAGHVAVFCNAAPGCRSVWYRPQCERTS*
Ga0066903_1004438744	3300005764	Tropical Forest Soil	MGVQRPAWWSRYYPERCSNGHEWGPGRIIVSWMLCDCPPALAAQTAGPAGHVTVSCATPHCRSVWYKPRHER*
Ga0066903_1013084072	3300005764	Tropical Forest Soil	MGVRRPDWWSRYYPERCTNGHDWGPGKIIVSWMLCGCPPAQASAGPGPAGHLAVHCNAVPGCRSVWYRPRHEPGPGGRPG*
Ga0066903_1044111911	3300005764	Tropical Forest Soil	ALAMGVKRPGWWSRYYPERCSNGHEWAPGKIIVSWMLCDCPPAQAAQTAGPAGHVAVQCATPHCQSVWYKPRHDPRT*
Ga0066903_1046940082	3300005764	Tropical Forest Soil	ALAMGVKRPGWWSRYYPERCSNGHEWAPGKIIVSWMLCDCPPAQAAQTAGPAGHVAVQCATPHCQSVWYKPRHDPSA*
Ga0066903_1085789361	3300005764	Tropical Forest Soil	MGVKRPDWWSRYYPERCSNGHEWAPGKIIVSWMLCDCPPAQDAQTAGPAGHVAVQCATPHCQSVWYKPRHDPR
Ga0070717_100051608	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VGVHRPAWWSRYYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0066656_104828963	3300006034	Soil	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPAAQAASGGGAAGHMAVFCNAAPGCRSVWYRPRCELALAAV*
Ga0066652_1002614242	3300006046	Soil	MGVRRRDWWCCPERCQNGHEWGPGLITVSWMLCDCPPDQAAREQVGRPGGAVAVFCNAAPGCRSV*
Ga0066652_1006442031	3300006046	Soil	DWWCYPKRCSNEYQWGPGLIEVLWSLCDCGPAVAAGGGGACGHLAVYCAAPPGCRPVGHRPRHERTT*
Ga0075024_1005572731	3300006047	Watersheds	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCSPAAAAHGGVSGAGHLAVY
Ga0075028_1005592101	3300006050	Watersheds	MSRSNRLMGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAYGHVSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0075017_1012686211	3300006059	Watersheds	MGVNRPDWWCYPERCANGHEWGPGLIIVSWVLCDCPPAVAARGGYPGAGHQAVYCEASPGCRSVW
Ga0070715_104155642	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGVRRPGWWCYPERCSNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNVKGCRSVWTGPGTTPYS*
Ga0070716_1001473392	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGVQRPAWWSRYYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0070712_1002345933	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRPAWWCYPERCENGHEWGPGLIIVSWSMCDCPPALAARTAGPSGHLAVYCRVPGCRSVWYRPRHEPGT*
Ga0070712_1014980133	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGVQRPAWWSRYYPERCANGHEWGPGKIIVSWELCECAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRCERRS*
Ga0074051_100152624	3300006572	Soil	MRVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGHVSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0074056_100224633	3300006574	Soil	MGVRRPDWWSRYYPERCTNGHDWGPGKIIVSWMLCGCPPAQASAGPGPAGHLAVHCNAVPGCRSVWYRPRHEPQQP*
Ga0074056_118327542	3300006574	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVCWSPCDCDPAAAAHGGVSGAGHLAVYCNA
Ga0074053_119709462	3300006575	Soil	MGVRRPDWWSRYYPERCTNGHDWGPGKIIVSWMLCGCPPAQASAGPGPAGHLAVHCNAVPGCRSVWYRPRHEPGPGGGSG*
Ga0074047_111363701	3300006576	Soil	MGVQRPGWWSYPERCENGHEWGPGLITVSWSPCDCPPAVAAHGGASGAGHLAVYCNAQGCRSVWYRPRHE
Ga0074059_100109891	3300006578	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAYGHVSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0074054_120878752	3300006579	Soil	MGERRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGDMSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0074064_115094181	3300006603	Soil	MGVKRPDWWSRYYPEQCSNGHEWAPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVRYRPRCGRRS*
Ga0074062_129990514	3300006606	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGGVSGAGHLAVYCNAAGCRSVWYRPRHEP*
Ga0079222_105958022	3300006755	Agricultural Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWVLCDCPPALAAQTAGPAGHVAVYCATPGCRSAWYKPRHEPQA*
Ga0079222_110311101	3300006755	Agricultural Soil	MGVQRPAWWSRYYPERCPNGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHDP*
Ga0066653_105392701	3300006791	Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVCWVLCDCPPAQAARERAGGPAGHMAVFCNAAPRCRSVWYRPRCTSS*
Ga0066659_110207352	3300006797	Soil	MGVRRPDWWCYPERCQYGHEWGPGLITVSWVLCDCPAAQAVRERAGGGPAGHMAVFCNAAPACRSVWYRPRHEAVASPGFGR*
Ga0079221_101018313	3300006804	Agricultural Soil	MGVQRPHWWSRYYPQCCANGHEWGPGKIIVGWVLCDCPPALAGQTAGPAGHVAVYCATPGCRSAWYKPRHEPQA*
Ga0079221_101928373	3300006804	Agricultural Soil	MGVHRPAWWSRYYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0079220_103959781	3300006806	Agricultural Soil	MGVQRPAWWSRYYPERCANGHEWGPGKIIVSWELCECAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRCER*
Ga0079220_116707142	3300006806	Agricultural Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWVLCDCPPALAGQTAGPAGHVAVYCATPGCRSAWYKPRHEPQA*
Ga0075425_1000496186	3300006854	Populus Rhizosphere	MGVRRPDWWRYPERCQNGHEWGPGLITVSWVLCDCPPAMAARERVGGGPAGHMAVFCNAAPGCRSVWYRPRHEPGT*
Ga0075425_1000892283	3300006854	Populus Rhizosphere	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPARAAQERAGGPAGHMAVFCNAAPGCRPVWYRPRHGPGV*
Ga0075425_1000983661	3300006854	Populus Rhizosphere	VDVERPAWWCYPLECENGHPWGPGRIIVSWTLCDCAPALAVGTQGLTGHLVVYCRTEGCRSVWYRPRHEP
Ga0075425_1002942852	3300006854	Populus Rhizosphere	MGVRRPAWWCYPERCQNVHESGPDLITVSWVLCDCPAAQAASGGGAAGHMAVFCNAAPGCRSVWYRPRCELALAAV*
Ga0075434_1000259251	3300006871	Populus Rhizosphere	WCYPERCQNGHEWGPGLITVSWVLCDRPPALTARTPGAAAGHMAVFCNAAPGCRSVWYRPRHEPGT*
Ga0075434_1002149432	3300006871	Populus Rhizosphere	VVVRRPDWWCYPERCQNGHEWGPGLITVAWVLCDCPAARATSGGGAAGHLAVFCNVMGCRSVWYRPRCSA*
Ga0075434_1009348193	3300006871	Populus Rhizosphere	RPDWWCYPERCQNGHEWGPGRIIVSWVMCDCGPAQAARTPGAPAGHMAVFCNAAPGCRSVWYRPRCERG*
Ga0075434_1009778111	3300006871	Populus Rhizosphere	MGVRRPAWWCYPERCQNVHESGPDLITVSWVLCDCPAAQAASGGGAAGHMAVFCNAAPGC
Ga0075426_102777933	3300006903	Populus Rhizosphere	VRRNAGSRTRVLIVPMGVRRPAWWCYPERCQNVHESGPDLITVSWVLCDCPAAQAASGGGAAGHMAVFCNAAPGCRSVWYRPRCELALAAV*
Ga0075426_105261472	3300006903	Populus Rhizosphere	VGVHRPAWWSRYYPERCANGHEWGPGKIIVSWELCDCASALAAQTAGPAGHVAVCCAVKGCRSVWYRPRHEPVG*
Ga0075426_113674702	3300006903	Populus Rhizosphere	RPAWWSRYYPERCANGHEWGPGKIIVSWELCDCAPALAAQTAGPAGHVAVCCAVKGCRSVWYRPRCERRS*
Ga0075424_10003380310	3300006904	Populus Rhizosphere	MGVRRPAWWCYPERCQNGHEWGPGLITVSWVLCDCPAARAASGGGAAGHMAVFCNAAPGCRSVWYRARHKPGG*
Ga0075424_1015156021	3300006904	Populus Rhizosphere	AYGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAARAASGGGAAGHMAVFCNAAPRCRSVWYRPRHDSGPGAG*
Ga0075424_1021080541	3300006904	Populus Rhizosphere	MGVVRPDWWCYPERCSNGHEWGPGLIVVSWSLCDCGPAVAASGGGAPGHLAVYCAASPGCRSVWYRPGCERRQ*
Ga0075436_1004538131	3300006914	Populus Rhizosphere	PYSDRTRVLIVPMGVRRPDSGVTRERCQNGHEWGPGLITVSWVLCDRPPALAARTPGAAAGHMAVFCNAAPGCRSVWYRPRHEPGT*
Ga0075435_1015276202	3300007076	Populus Rhizosphere	IAASGIRTCVLMSHGVRRPGWWCYPERCSNAHEWGPGLITVSWVLCDCPAAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPRHEPTGLNRQLRCPGRRR*
Ga0099828_103057631	3300009089	Vadose Zone Soil	MSRSNRLMGVRRPAWWSYPEQCENGHEWAPGLIIVSWSMCDCPPALAAGTPGPSGHLAVYLP
Ga0066709_1006077382	3300009137	Grasslands Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVCWVLCDCPPAQAARERAGGPAGHMAVFCNAAPRCRSVWYRLAHEPGR*
Ga0066709_1019228222	3300009137	Grasslands Soil	MRWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRPVWYRLRHEPAR*
Ga0114129_105211803	3300009147	Populus Rhizosphere	CSNRAYGVKRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAAQAASGGGAAGHMAVFCNAAPGCRSVWYRPRHERGT*
Ga0111538_120588041	3300009156	Populus Rhizosphere	FRSCHGVRRPEWWCYPAACENGHEWGPGLITVSWVLCDCPAAQAACGGGAAGHMAVFCNAAPGCRSVWYRPRCELALAAV*
Ga0075423_102758544	3300009162	Populus Rhizosphere	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAALAASGGGAAGHKAVFCNAAPGCRSVWYRPRHEPTGLARLSRWAI
Ga0126382_110381532	3300010047	Tropical Forest Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVAVYCATPHCRSVWYKPRHEPG*
Ga0126370_109261182	3300010358	Tropical Forest Soil	MGVKRPDWWSRYYPERCSNGHEWAPGKIIVSWMLCDCPPAQAAQTAGPAGHVAVQCATPHCQSVWYKPRHDPRT*
Ga0126376_112811112	3300010359	Tropical Forest Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVAVYCATPHCRSIWYKPRHEPG*
Ga0126372_100577101	3300010360	Tropical Forest Soil	MAVQRPHWWSRYYPECCANGHEWGPGKIIVGWMLCDCPPALAAQTAGPAGHVAVYCATPHCRSVWYKPRHEPG*
Ga0126372_110107551	3300010360	Tropical Forest Soil	MGVRRPDWWCYPERCANGHEWGPGLITLSWVLCDCPPAQAARERAGGPAGHLAVF
Ga0126381_1034011072	3300010376	Tropical Forest Soil	MALVRPDWWCYPERCANGHEWGPGLIIVSWSLCDCPAALEASGGGAPGHLAVYCSASPGCRSVWYR
Ga0126383_103406493	3300010398	Tropical Forest Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWTLCDCPPALAAQTAGPAGHVAVYCATPHCRSVWYKPRHEPG*
Ga0137364_101208592	3300012198	Vadose Zone Soil	MRWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPRHEPAR*
Ga0137364_107463722	3300012198	Vadose Zone Soil	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAQGVRERAGGGPAGHMAVFCN
Ga0137365_100340601	3300012201	Vadose Zone Soil	MAVRQPDWWCYPQRCQNGHEWGPGLITVSWVLCDCPPARAVRERVGGGPAGHMAVFCHAAPGCRSVWYRPRC
Ga0137365_103107881	3300012201	Vadose Zone Soil	MGVQRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRS
Ga0137376_105101112	3300012208	Vadose Zone Soil	MAVVRPGWWCYPERCQNGHEWGPGLIVVSFSLCDCAPAVEASGDGAAGHLAVYCAASPGCRSVWYRPRCEQHG*
Ga0137372_100252104	3300012350	Vadose Zone Soil	MGVQRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPQHEPGT*
Ga0137372_100332782	3300012350	Vadose Zone Soil	MAVRQPDWWCYPQRCQNGHEWGPGLITVSWVLCDCPPARAVRERVGGGPAGHMAVFCHAAPGCRSVWYRPRCASS*
Ga0137372_101577962	3300012350	Vadose Zone Soil	MGVQRPDWWCYPERCQNGHEWGLGLITVSWVLCDLPTSHGRAGASRWGPAGHMAVFCNVKGCRSVWYRPRHEPGT*
Ga0137366_101231091	3300012354	Vadose Zone Soil	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAARERAGGPAGHMAVFCNAARRCR
Ga0137366_102616493	3300012354	Vadose Zone Soil	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAARAASGGGAAGHMAVFCNAAPGCRSVWYRPRHESPGHEQCQHR
Ga0137366_106308541	3300012354	Vadose Zone Soil	QRPDWWCYPERCQNGHEWGLGLITVSWVLCDLPTSHGRAGASRWGPAGHMAVFCNVKGCRSVWYRPRHEPGT*
Ga0137371_1000278011	3300012356	Vadose Zone Soil	MGVRRPDWWCYPERCQHGHEWGPGLIIVSWVLCDCPAALAAQERVGGPAGHMAVFCDASPGCRSVWHRPRCGRGV*
Ga0137371_100928373	3300012356	Vadose Zone Soil	VSIQKNAYSCHGVRRPDWWCYPERCQHRHEWSPGLITVSWVLCDWPAAQAAQDRAGGGPAGHMAVFCNAAPGSRSVWYWPRHVP*
Ga0132256_1038096332	3300015372	Arabidopsis Rhizosphere	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPTARATSGGGAAGHMAVFCNVKGCRSVWYRPRHEPAGLARLSRQAVPY
Ga0132255_1029914911	3300015374	Arabidopsis Rhizosphere	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAAQAVRELAGGGPAGHMAVFCNAAPGCRSVWYRPRREPQART*
Ga0182036_108649562	3300016270	Soil	IRLYVLIARMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0182041_118885271	3300016294	Soil	MAVRRPDWWCYPERCQNGHEWGPGLIVVSWSLCDCGPAVEFSGGGAAGHLAVYCAASSGCRSVWYRPSCERRR
Ga0182035_108718791	3300016341	Soil	LCSNRLMVAHRPEWWCYPERCANGHEWGPGLITVSWSLCDCGPAVAASAGGAPGHLAVYCSASPGCRSVWYRPLCERR
Ga0187779_100214133	3300017959	Tropical Peatland	VGVDRPEWWCYPERCENGHEWGPGRIIVSWSLCDCPPAQAASTAGPAGHVAVYCQAPGCRSVWYLPRHEPGR
Ga0187765_112958152	3300018060	Tropical Peatland	MGVRRPDWWCYPERCSNGHEWGPGLIVVSWSLCDCGPAVEASGGGAAGHLAVYCAASPGCRSVWY
Ga0184625_106600792	3300018081	Groundwater Sediment	MAVRRPDWWCYPERRQNGHEWGPGLITVFWVLCDCGPARAAWERAGGPAGHMAV
Ga0066669_102679123	3300018482	Grasslands Soil	MRWCYPERCQNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPRHEPAR
Ga0066669_120691032	3300018482	Grasslands Soil	MEVQRPEWWCYPERCRNGHEWEPGLITVPWVLCDCPAARAASGGGAAGHMAVFCNAAPGCRSV
Ga0173479_104595271	3300019362	Soil	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPAAQAASGGGAAGHMAVYCNAAPGCRSVWYRPRHEP
Ga0207692_101853731	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	SRVSPPERCANGHEWGPGLIVVSWSLCDCPSAVAASGGGAPGHLAVYCAASPGCRSMWYLPRREPEMA
Ga0207664_103530181	3300025929	Agricultural Soil	MGVRRPGWWCYPERCSNGHEWGPGLITVSWVLCDCPPAQAVRERAGGGPAGHMAVFCNVKGCRSVWYRPRHHPLQLVWFS
Ga0207678_112934011	3300026067	Corn Rhizosphere	NRVVGVRRPAWWCYPERCQNGHEWGPGLIIVSWVLCDCPAAQAASGGGAAGHLAVYCRVKGCRSVWYRPRHEPTGLNRQLRCPGRRR
Ga0207675_1015580783	3300026118	Switchgrass Rhizosphere	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPTARATSGGGAAGHMAVFCNAKGCQSVWYRPR
Ga0208475_10227472	3300027018	Soil	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPTARATSGGGAAGHMAVFCNAAPGCRSVWYRPRHEQLAAPT
Ga0209814_101498062	3300027873	Populus Rhizosphere	MGVRRPDWWCYPERCQKGHEWGPGLITVSWVLCDCPTARATSGGGAAGHMAVFCNVKGCQSVWYRPRHEPQALPGVRPLTS
Ga0307280_102532432	3300028768	Soil	MGVRRPDWWRYPQRCQKGHEWGPGLITVSWVLCDCPTARATSGGGAAGHMAVFCNVKGCQSVWYRPRHEPQALSGQTG
Ga0307305_103682682	3300028807	Soil	MGVRRPDWWCYPERRQNGHEWGPGLITVFWVLCDCGPARAAWERAGGPAGHMAVFCNAAPGCRPAWYRPRPEPGS
Ga0307296_108255001	3300028819	Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVSWVLCDCAPARAAQERAGGPAGHMAAFCNAAPGCRS
Ga0307312_112044091	3300028828	Soil	MGVRRPDWWCYPERCQNGHEWGPGLITVSWVLCDCPAAMAARERAGGPAGHMAVFCNAAPGCWPVWYWPRCEWST
Ga0307308_100604762	3300028884	Soil	MGVQRPHWWSRYYPECCANGHEWGPGKIIVGWVLCDCPPALAVQTAGPAGHVAVYCATPHCRSVWYKPRHKPG
Ga0307308_102484651	3300028884	Soil	MGVRRPAWWCYPERCQNGHEWGPGLITVSWVLCDCAPARAAQERAGGPAGHMAAFCNAAP
Ga0308178_11098411	3300030990	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGHVSGAGHLAVYCNAAGCRS
Ga0308181_11506361	3300031099	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGHVSGAGHLAVYCNAAGCRSVWYRPRHEP
Ga0308194_102897261	3300031421	Soil	MGVRRPAWWSYPEQCENGHEWAPGLITVSWSPCDCGPAVAAHGHVSGAGHLAVYCNAA
Ga0318571_102125102	3300031549	Soil	MALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWY
Ga0318492_101007894	3300031748	Soil	MAVRRPDWWCYPERCQNGHEWGPGLIVVSWSLCDCGPAVEFSGGGAAGHLAVYCAASSGCRSVWYRPS
Ga0318535_104110391	3300031764	Soil	GDVPAVPCPAGLRTRVLIARMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0318565_105148951	3300031799	Soil	DVGVRRPEWWCYPERCSDGHEWGPGLITVSWLPCDCPPAAARGGYFGAAHLAVYCDAEPGCGSVWYRPRCEAARPGA
Ga0318497_102898492	3300031805	Soil	MSRRGFSFPRRDINGIRLYVLIARMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0318568_105699971	3300031819	Soil	MAVRRPDWWCYPERCQNGHEWGPGLIVVSWSLCDCGPAVEFSGGGAAGHLAVYCAASSG
Ga0318520_106374321	3300031897	Soil	VRTCVLILPMAVRRPGWWCYPERCQNGHEWGPDGIIVSWVMCDCGPAEAARTLGAPSGHLAMACNAAPKCESEWYRPRCERR
Ga0306923_120183371	3300031910	Soil	SNPLMAVRRPDWWCYPERCQNGHEWGPGLIVVSWSLCDCGPAVEFSGGGAAGHLAVYCAASSGCRSVWYRPSCERRR
Ga0310910_102099983	3300031946	Soil	VRRPGWWCYPQRCSNGHEWGPGLITVSWVPCDCPPAVAARGGYFGAAHLAVYCDAEPGCQSVWYRPRHER
Ga0306926_116791142	3300031954	Soil	MTVRRPAWWCYPERCQNGHEWGPGLIIVSWSLCDCGPALAAQEQAGGGPAGHLAVYCAASPGC
Ga0318530_103645001	3300031959	Soil	LRTRVLIARMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0318507_103786831	3300032025	Soil	VGDVPAVPCPAGLRTRVLIARMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0318558_102715841	3300032044	Soil	RMALVRPDWWCYPERCANGHEWGPGLITVSWSLCDCAPAVAASGGGAPGHMAVYCAASPGCRSVWYRPRCERRG
Ga0318570_103095731	3300032054	Soil	MAVRRPDWWCYPERCQNGHEWGPGLIVVSWSLCDCGPAVEFSGGGAAGHLAVYCAASSGCRSVWY
Ga0307472_1017638811	3300032205	Hardwood Forest Soil	MSHRVRRPGWWCYPERCSNAHEWGPGLITVSWVLCDCPAAQAVRERAGGGPAGHMAVFCNAAPGCRSVWYRPRHEPTGLNRQLRCPGRRR
Ga0335078_118556441	3300032805	Soil	MGVQRPDWWCYPERCANGHEWGPGLITVSWSMCDCAPALAAGAPGPAGHLAVYCNAPGCRSVWYRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences