Metagenome / Metatranscriptome Family F046050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046050
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	55 residues
Representative Sequence	MKEPWTDPSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAIRRSR
Number of Associated Samples	92
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.40 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	92.11 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.895 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (15.132 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.158 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.83% β-sheet: 0.00% Coil/Unstructured: 42.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF01068	DNA_ligase_A_M	7.24
PF04392	ABC_sub_bind	1.97
PF07045	DUF1330	1.32
PF00589	Phage_integrase	1.32
PF01391	Collagen	1.32
PF00072	Response_reg	0.66
PF04862	DUF642	0.66
PF13458	Peripla_BP_6	0.66
PF00196	GerE	0.66
PF00025	Arf	0.66
PF05239	PRC	0.66
PF05235	CHAD	0.66
PF06742	DUF1214	0.66
PF09459	EB_dh	0.66
PF05050	Methyltransf_21	0.66
PF07750	GcrA	0.66
PF02668	TauD	0.66
PF02683	DsbD	0.66
PF00313	CSD	0.66
PF02735	Ku	0.66
PF13751	DDE_Tnp_1_6	0.66
PF02518	HATPase_c	0.66
PF00216	Bac_DNA_binding	0.66
PF01583	APS_kinase	0.66
PF13185	GAF_2	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	7.24
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	7.24
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.97
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.32
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.66
COG1100	GTPase SAR1 family domain	General function prediction only [R]	0.66
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.66
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.66
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.66
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.66
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.66
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.66
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.66
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.89 %
Unclassified	root	N/A	42.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.89 %
Unclassified	root	N/A	42.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.89 %
Unclassified	root	N/A	42.11 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.05 %
Unclassified	root	N/A	42.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.63 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	28.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.63 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.63 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.63 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.66 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.66 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.63 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.66 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17415856	Not Available	1025	Open in IMG/M
2170459005\|F1BAP7Q02F93KA	Not Available	517	Open in IMG/M
2228664022\|INPgaii200_c1004535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1112	Open in IMG/M
3300000156\|NODE_c0623131	Not Available	1856	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1048793	Not Available	652	Open in IMG/M
3300000955\|JGI1027J12803_104673223	Not Available	626	Open in IMG/M
3300000955\|JGI1027J12803_104716110	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300000956\|JGI10216J12902_104006931	Not Available	869	Open in IMG/M
3300000956\|JGI10216J12902_107582356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1379	Open in IMG/M
3300001867\|JGI12627J18819_10151757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300004268\|Ga0066398_10049854	Not Available	843	Open in IMG/M
3300004268\|Ga0066398_10086537	Not Available	705	Open in IMG/M
3300004629\|Ga0008092_11073142	Not Available	547	Open in IMG/M
3300005172\|Ga0066683_10475730	Not Available	764	Open in IMG/M
3300005184\|Ga0066671_10371666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	911	Open in IMG/M
3300005187\|Ga0066675_10017482	All Organisms → cellular organisms → Bacteria	3969	Open in IMG/M
3300005187\|Ga0066675_10411454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1000	Open in IMG/M
3300005187\|Ga0066675_10920727	Not Available	660	Open in IMG/M
3300005332\|Ga0066388_100145759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2939	Open in IMG/M
3300005332\|Ga0066388_101255360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1272	Open in IMG/M
3300005332\|Ga0066388_102822768	Not Available	887	Open in IMG/M
3300005332\|Ga0066388_104234422	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300005332\|Ga0066388_105707657	Not Available	630	Open in IMG/M
3300005332\|Ga0066388_107811469	Not Available	536	Open in IMG/M
3300005332\|Ga0066388_108841652	Not Available	500	Open in IMG/M
3300005363\|Ga0008090_15059326	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005363\|Ga0008090_15440164	Not Available	844	Open in IMG/M
3300005434\|Ga0070709_11064167	Not Available	646	Open in IMG/M
3300005434\|Ga0070709_11381311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300005435\|Ga0070714_100177246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1937	Open in IMG/M
3300005435\|Ga0070714_100624943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300005435\|Ga0070714_101579386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300005435\|Ga0070714_102141954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300005437\|Ga0070710_10066818	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300005439\|Ga0070711_100067832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2504	Open in IMG/M
3300005439\|Ga0070711_100264158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300005552\|Ga0066701_10310545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	978	Open in IMG/M
3300005713\|Ga0066905_100636234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	907	Open in IMG/M
3300005764\|Ga0066903_100414423	Not Available	2226	Open in IMG/M
3300005764\|Ga0066903_100499624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2060	Open in IMG/M
3300005764\|Ga0066903_100971444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1548	Open in IMG/M
3300005764\|Ga0066903_101068551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1484	Open in IMG/M
3300005764\|Ga0066903_102378518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024	Open in IMG/M
3300005764\|Ga0066903_102544894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300005764\|Ga0066903_102961735	Not Available	920	Open in IMG/M
3300005764\|Ga0066903_103047309	Not Available	907	Open in IMG/M
3300005764\|Ga0066903_104756129	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005764\|Ga0066903_104843259	Not Available	715	Open in IMG/M
3300005764\|Ga0066903_105301576	Not Available	681	Open in IMG/M
3300005764\|Ga0066903_106946566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300006028\|Ga0070717_11382455	Not Available	639	Open in IMG/M
3300006163\|Ga0070715_10153838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300006173\|Ga0070716_100484608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	909	Open in IMG/M
3300006173\|Ga0070716_100836480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300006175\|Ga0070712_100285197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1331	Open in IMG/M
3300006175\|Ga0070712_100290260	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300006755\|Ga0079222_10161717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1290	Open in IMG/M
3300006791\|Ga0066653_10640301	Not Available	543	Open in IMG/M
3300006806\|Ga0079220_11788739	Not Available	541	Open in IMG/M
3300006852\|Ga0075433_10751412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300006871\|Ga0075434_101287551	Not Available	742	Open in IMG/M
3300006904\|Ga0075424_101979786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300006904\|Ga0075424_102147091	Not Available	588	Open in IMG/M
3300006904\|Ga0075424_102675530	Not Available	521	Open in IMG/M
3300006954\|Ga0079219_10579955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300007788\|Ga0099795_10088353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300009162\|Ga0075423_11766251	Not Available	667	Open in IMG/M
3300010046\|Ga0126384_10625476	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300010046\|Ga0126384_10910246	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300010046\|Ga0126384_11386887	Not Available	655	Open in IMG/M
3300010046\|Ga0126384_12206578	Not Available	530	Open in IMG/M
3300010048\|Ga0126373_10863517	Not Available	968	Open in IMG/M
3300010337\|Ga0134062_10084416	Not Available	1344	Open in IMG/M
3300010376\|Ga0126381_102337031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300010376\|Ga0126381_103049667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300010376\|Ga0126381_104572989	Not Available	533	Open in IMG/M
3300010398\|Ga0126383_10182456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1996	Open in IMG/M
3300010398\|Ga0126383_10540835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	1229	Open in IMG/M
3300010398\|Ga0126383_12226487	Not Available	634	Open in IMG/M
3300010398\|Ga0126383_12496780	Not Available	601	Open in IMG/M
3300010863\|Ga0124850_1002674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5281	Open in IMG/M
3300011000\|Ga0138513_100067843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012198\|Ga0137364_10393063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300012200\|Ga0137382_10278245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300012200\|Ga0137382_10471580	Not Available	890	Open in IMG/M
3300012206\|Ga0137380_11151546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	660	Open in IMG/M
3300012207\|Ga0137381_10928645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	752	Open in IMG/M
3300012211\|Ga0137377_10661637	Not Available	980	Open in IMG/M
3300012211\|Ga0137377_11165341	Not Available	700	Open in IMG/M
3300012353\|Ga0137367_10424846	Not Available	941	Open in IMG/M
3300012582\|Ga0137358_10044931	Not Available	2932	Open in IMG/M
3300012582\|Ga0137358_10265749	Not Available	1166	Open in IMG/M
3300012582\|Ga0137358_10305928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300012582\|Ga0137358_10911747	Not Available	575	Open in IMG/M
3300012918\|Ga0137396_10868227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012923\|Ga0137359_11336708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	605	Open in IMG/M
3300012924\|Ga0137413_11704659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300012948\|Ga0126375_10837353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300012948\|Ga0126375_11213227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300012971\|Ga0126369_11240475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300015371\|Ga0132258_10079727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7632	Open in IMG/M
3300015373\|Ga0132257_100113717	Not Available	3133	Open in IMG/M
3300016270\|Ga0182036_11679502	Not Available	536	Open in IMG/M
3300016357\|Ga0182032_10323668	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300016357\|Ga0182032_11854175	Not Available	527	Open in IMG/M
3300016422\|Ga0182039_11045700	Not Available	734	Open in IMG/M
3300018433\|Ga0066667_11625539	Not Available	576	Open in IMG/M
3300018482\|Ga0066669_10165886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1646	Open in IMG/M
3300018482\|Ga0066669_10538776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1015	Open in IMG/M
3300019361\|Ga0173482_10784010	Not Available	503	Open in IMG/M
3300020140\|Ga0179590_1054062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1039	Open in IMG/M
3300020579\|Ga0210407_10340577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300020580\|Ga0210403_10140270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1974	Open in IMG/M
3300020580\|Ga0210403_10175621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1756	Open in IMG/M
3300020581\|Ga0210399_10247194	All Organisms → cellular organisms → Bacteria → PVC group	1487	Open in IMG/M
3300020581\|Ga0210399_11365840	Not Available	555	Open in IMG/M
3300021168\|Ga0210406_11231495	Not Available	543	Open in IMG/M
3300021405\|Ga0210387_10714253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300021560\|Ga0126371_10577361	Not Available	1273	Open in IMG/M
3300021560\|Ga0126371_10639303	Not Available	1213	Open in IMG/M
3300021560\|Ga0126371_10925338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300021560\|Ga0126371_13042492	Not Available	568	Open in IMG/M
3300022530\|Ga0242658_1035240	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300022726\|Ga0242654_10381817	Not Available	537	Open in IMG/M
3300025898\|Ga0207692_10382487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300025905\|Ga0207685_10837480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300025915\|Ga0207693_10131417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1968	Open in IMG/M
3300025915\|Ga0207693_11178222	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300026547\|Ga0209156_10144109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300026550\|Ga0209474_10137142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1606	Open in IMG/M
3300026557\|Ga0179587_10141578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1493	Open in IMG/M
3300028784\|Ga0307282_10050198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1862	Open in IMG/M
3300028811\|Ga0307292_10245353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300028881\|Ga0307277_10012687	All Organisms → cellular organisms → Bacteria	3254	Open in IMG/M
3300028881\|Ga0307277_10331216	Not Available	677	Open in IMG/M
3300028884\|Ga0307308_10605482	Not Available	525	Open in IMG/M
3300031545\|Ga0318541_10091534	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300031573\|Ga0310915_10243745	Not Available	1264	Open in IMG/M
3300031573\|Ga0310915_10336300	Not Available	1069	Open in IMG/M
3300031798\|Ga0318523_10269688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300031879\|Ga0306919_10347292	Not Available	1133	Open in IMG/M
3300031890\|Ga0306925_10240322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1952	Open in IMG/M
3300031890\|Ga0306925_10264350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1854	Open in IMG/M
3300031890\|Ga0306925_10271777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1826	Open in IMG/M
3300031941\|Ga0310912_10545644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300031945\|Ga0310913_10283936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1166	Open in IMG/M
3300031954\|Ga0306926_11830016	Not Available	688	Open in IMG/M
3300031954\|Ga0306926_12273831	Not Available	601	Open in IMG/M
3300032054\|Ga0318570_10406524	Not Available	621	Open in IMG/M
3300032091\|Ga0318577_10244558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300032205\|Ga0307472_101271728	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.08%
Host-Associated	Host-Associated	5.26%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.08%
Plants	Host-Associated → Plants	5.26%
Solid Waste	Engineered → Solid Waste	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.66%
Grass	Engineered → Solid Waste → Grass	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.13%
Loam	Environmental → Terrestrial → Soil → Loam	28.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.66%
Composting	Engineered → Solid Waste → Grass → Composting	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.97%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.66%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.66%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.66%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01724650	2088090014	Soil	MKAPWTDPDLRELLALAALAASGCGLALARDDLMFTAIFAAAWAVTIVGMMRHLR
E41_04766100	2170459005	Grass Soil	VEVRWPPRRVGVPMSLQKALNCEMKVPWTDPGLRELLALAALAAFGCGLALAQGDFLFAAIFAAASALIIVEALRRLR
INPgaii200_10045353	2228664022	Soil	GPTCEMKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAASALIIVEALRRFR
NODE_06231314	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKAPWTDPSFRELVALAALGAFGCGLALALGDLLFATIFAAASAVTIIEAKRRSR*
AF_2010_repII_A01DRAFT_10487931	3300000580	Forest Soil	VPGQGRAQMKAPWTDPSFRELVALAALGAFGCGLALALGDLLFATIFAAASAVTIIEAKRRSR*
JGI1027J12803_1046732232	3300000955	Soil	MKAPWTDTGLRELLALAALAAFGCGLALAQGEFFFSAIFAAASALIIVEALRRFR*
JGI1027J12803_1047161102	3300000955	Soil	GADVLRKAPISEMKAPWTDPGLWELFALLALAALGFGLALRDDLMFTSIFAAACGVSIVGLMRHLR*
JGI10216J12902_1040069312	3300000956	Soil	MKAPWTDPSLRELVALAALAVFGWGLALARGDLLFLAIFAAASAVAIIEAVRRSR*
JGI10216J12902_1075823564	3300000956	Soil	MKAPWSDPGLRELLALAALSAFGCGLALAHGDFLFAAIFAAASAMVIVEALRRLR*
JGI12627J18819_101517573	3300001867	Forest Soil	IGPTCEMKAPWTDPGLRELLALAALAAFGCGLALAQGEFFFGAIFAAASAL*
Ga0066398_100498542	3300004268	Tropical Forest Soil	MKAPWTDPTLRELVALGALAAFGCGLALARGDLLFLSIFGAASAVTIIETVRRSR*
Ga0066398_100865372	3300004268	Tropical Forest Soil	MKEPWTAPSLRELLALAALAAFGCGLALARGGLLFLGIFGAASAVTIIEAIRRSR*
Ga0008092_110731421	3300004629	Tropical Rainforest Soil	VPGQGRAQMKAPWTDPSFRELVALAARGAFGCGLALALGDLLFATIFAAASAVTIIEAKRRSR*
Ga0066683_104757302	3300005172	Soil	MKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGTACAMTIVEAIRRLR*
Ga0066671_103716662	3300005184	Soil	MKAPWTDPGLHELFALSMLASFGCALALAVNDLLFAAIFAAAIAVTIIGG*
Ga0066675_100174823	3300005187	Soil	MKAPWTDPDLRELFTLSMLASFGCGLALAVNDLLFAAIFAAAIAVTIIEGTMRQLR*
Ga0066675_104114541	3300005187	Soil	MKAPWTDPGLHELFALSMLASFGCALALAVNDLLFAAIFAAAIAVTII
Ga0066675_109207271	3300005187	Soil	MKAPWTDPSLRELVALAALAAFGCGLALAQGDLLFLSIFGAAAAVTIIEAVR
Ga0066388_1001457591	3300005332	Tropical Forest Soil	LRALVALAALAAFGFGLALARGDLLFLSIFGAASAATIIEAVRRSR*
Ga0066388_1012553601	3300005332	Tropical Forest Soil	MKAPWIDPTLRELVALGALAAFGCGLALARGDLLFLSVFGAASAVTIIEAIRRSR*
Ga0066388_1028227681	3300005332	Tropical Forest Soil	TIRVQMKEPWTDPSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAKRRSR
Ga0066388_1042344222	3300005332	Tropical Forest Soil	MKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAASVLIIVEALRRFR*
Ga0066388_1057076572	3300005332	Tropical Forest Soil	MKAPWTDPSLRELVALAALAAFGCGLALALGDLLFATIFGAAGAVTIIEARRRSR*
Ga0066388_1078114691	3300005332	Tropical Forest Soil	MKVPWTDPTLRELAALAALAAFGCGLALALGDLLFATIFGAAGAVTIIEARRRSG*
Ga0066388_1088416521	3300005332	Tropical Forest Soil	MKDPWTDSGLRELFALAAIAMGGGCLALAQGDFLFAAIFAAASAMVIVEALRRLR*
Ga0008090_150593262	3300005363	Tropical Rainforest Soil	MKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAANALIIVEALRRFR*
Ga0008090_154401641	3300005363	Tropical Rainforest Soil	AALAAFGCGLALAQADLFFATIFAAASAFIVVEALRRLR*
Ga0070709_110641671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWSGPGLRELPALAALVAFGCGLAVAQDDLLFATIFTGESATVIAEALQRFQ*
Ga0070709_113813112	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GEMKAPWTDPGLRELLALAALAASGCGLALARDDLMFTAIFAAAWAVTIVGLMRYLR*
Ga0070714_1001772463	3300005435	Agricultural Soil	MKAPWTDPGLRELLALAALAALGCGLALAHDDLMFTAIFAAAWAVTIVGLMRYLR*
Ga0070714_1006249432	3300005435	Agricultural Soil	MKAPWTDPGLRELLALAALAASGCGLALARDDLMFTTIFAAAWAVTIVGMMRHLR*
Ga0070714_1015793861	3300005435	Agricultural Soil	LPCTSEMKAPWSGPGLRELPALAALVAFGCGLAVAQDDLLFATIFTGESATVIAEALQRFQ*
Ga0070714_1021419541	3300005435	Agricultural Soil	MKAPWTDPGLRELFALSMLASFGCGLALAVNDLLFAAIFAAAIAVTIIGGAMRQLR*
Ga0070710_100668182	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTPWTEPALRELLALAALSAFGCGLALAQGDFLFAAIFAAASSLIIIEAMRR*
Ga0070711_1000678322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNAPWTDPGLRELLALAALAAFGVGLALARDDLMFTAIFAAACAVTIVGVMRRLR*
Ga0070711_1002641582	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWTDPGLRELLALAALAALGCGLALAHDDLMFTAIFGAAWAVTIVGLMRYLR*
Ga0066701_103105453	3300005552	Soil	MKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGTACAMTIVEAIR
Ga0066905_1006362341	3300005713	Tropical Forest Soil	MKAPWTDPGLRELLALAALAAFGCGLALARGDLLFLSIFGVASVVTIIEAIRRSR
Ga0066903_1004144235	3300005764	Tropical Forest Soil	MKLPWKDPHLLELLALAMLAAFGCGLALAQGDFLFVGIFAATSAVTI
Ga0066903_1004996244	3300005764	Tropical Forest Soil	MKAPWTDPSLRELVALAALAAFGCGLASTLGDLLFATIFGAAGAVTIIEARRRSR*
Ga0066903_1009714443	3300005764	Tropical Forest Soil	ELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAIRRSR*
Ga0066903_1010685512	3300005764	Tropical Forest Soil	MKEPWTDPSLRELLALAALAAFGCGLALARVNFLFLGIFGAVSAVTIIEAIRRSR*
Ga0066903_1023785181	3300005764	Tropical Forest Soil	ELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAKRRSR*
Ga0066903_1025448941	3300005764	Tropical Forest Soil	MKEPWTDPSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIE
Ga0066903_1029617352	3300005764	Tropical Forest Soil	MKAPWTDPSLRELIALAALAAFGCGLALALDDLLFATIFGAASAVTIIEAKRRSP*
Ga0066903_1030473093	3300005764	Tropical Forest Soil	MKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAANALIIVEALRHFR*
Ga0066903_1047561293	3300005764	Tropical Forest Soil	PRPFQMKAPWTDPTLRELVALGALAAFGCGLALARGDLLFLSIFGAASAIKSLILGQYL*
Ga0066903_1048432591	3300005764	Tropical Forest Soil	MKEPWTDLSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIE
Ga0066903_1053015761	3300005764	Tropical Forest Soil	MKAPWSDPALRELLALGALAAFGCGLALAQADLLFATIFAAASAFIVVAALRRLQ*
Ga0066903_1069465662	3300005764	Tropical Forest Soil	MKAPWTDPSLRELLTLAALAAFGCGLALAQADLLFATIFAAASAFIVVAALRRLR*
Ga0070717_113824551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWTDPGLRELLALAALAAFGCGLALAQGEFFFGAIFAAASALIIVEALRRFR*
Ga0070715_101538383	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNAPWTDPGLRELLALAALAAFGAGLALARDDLMFTAIFAAACAVTIVGVMRRLR*
Ga0070716_1004846082	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWSDPGLRELLALAALAAFGCGLALAQDDFAFAVIFAVESALIIVEALRRLR*
Ga0070716_1008364802	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIVGVMRRLR*
Ga0070712_1002851971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LWTDPGLRELLALAALAVGGGCLALARDDSLFAVIFAVASATVIAENAVR*
Ga0070712_1002902601	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWTDPGLRELLALAALAASGCGLALARDDLMFTTIFAAAWAVTIVGMMRH
Ga0079222_101617173	3300006755	Agricultural Soil	MKTPWTDPGLRELFALSMLASFGCALALAVDDLLFAAIFAAAIAVTIIVGAMRQLP*
Ga0066653_106403011	3300006791	Soil	MKAPWRDPALRELLALAALASFGFGSAVVRDDLLFASIFAAS
Ga0079220_117887392	3300006806	Agricultural Soil	MKAPWTDPSLRELVALAALAAFGCGLALAQGDLLFLSIFGAAAAVTIIEAVRRSR*
Ga0075433_107514121	3300006852	Populus Rhizosphere	PWTDPSLRELVALAALAAFGCGLALAQGDLLFLSIFGAAAAVTIIEAVRRSR*
Ga0075434_1012875511	3300006871	Populus Rhizosphere	VLRGPTCEMKAPWTDPGLRELLALAALAAFGCGLALAQGEFFFGAIFAAASALIIVEALRRFR*
Ga0075424_1019797861	3300006904	Populus Rhizosphere	MITERKEASTCEMKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAASALIIVEALRRVR*
Ga0075424_1021470911	3300006904	Populus Rhizosphere	MKAPWTDPGLRELFALLMLAGFGWGVALAVDDLLFAAIFAAAIGATIIGAMRQLP*
Ga0075424_1026755301	3300006904	Populus Rhizosphere	MKAPWTDPSLRELVALAALAAFGCGLALAQGDLLFLSIFGAAAAVTI
Ga0079219_105799551	3300006954	Agricultural Soil	MKTPWTDPGLRESFALSMLASFGCALAPAVDDLLFAAIFAAAIAVTIIVGAMRQLP*
Ga0099795_100883532	3300007788	Vadose Zone Soil	MKAPWSDPGLQELLALGALAIFGCGLALAQDDVVFTAIFAVESGTVIAEALRRSR*
Ga0075423_117662511	3300009162	Populus Rhizosphere	MKAPWTDPGLRELLALAGLAAFGCGLALTQDDFLFATIFAVESATVIAEALRRLP*
Ga0126384_106254762	3300010046	Tropical Forest Soil	MKLPWKDLHLLELLALAMLAAFGCGLALAQGDFLFVGIFAATSAVTIIEAIRRSR*
Ga0126384_109102461	3300010046	Tropical Forest Soil	MKAPWTDPSLRELLALAALAAFGCGLALAQGDFLFAFVFCAASVVTIIEAIRRSR*
Ga0126384_113838071	3300010046	Tropical Forest Soil	LGRGTIRVQMKEPWTDPSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAIRRSR*
Ga0126384_113868872	3300010046	Tropical Forest Soil	MKLPWMDPRLRELIALAALAAFGCGLALARGDFLFVAVFVAASAVTISEAIRRR*
Ga0126384_122065781	3300010046	Tropical Forest Soil	LLMSFQKAHYTCVMKAPWKDPGLRELLALAALAAFGCGLALAQADLLFATIFAAASAHIVVTALRRLR*
Ga0126373_108635172	3300010048	Tropical Forest Soil	MIGNIIKRHTYTCVMKAPWTDPGLRELLTLAALAAFGCGLALAQADLLFATIFAAASAFIVVAALRRLQ*
Ga0134062_100844164	3300010337	Grasslands Soil	PMKAPWTDPGLHELFALSMLASFGCALALAVNDLLFAAIFAAAIAVTIIGG*
Ga0126381_1023370311	3300010376	Tropical Forest Soil	RGPTCEMKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAANALIIVEALRHFR*
Ga0126381_1030496672	3300010376	Tropical Forest Soil	MSFQKAHYTCVMKAPWKDPGLRELLALGALAAFGCGLALAQADLLFATIFAAASAFIVVAALRRLR*
Ga0126381_1045729891	3300010376	Tropical Forest Soil	RRIKAPWTDPTLRALVALAALADLGFGLALARGDLLFLSIFGAASAATIIEAVRRSR*
Ga0126383_101824563	3300010398	Tropical Forest Soil	QGRAQMKAPWTDPSFRELVALAALGAFGCGLALALGDLLFATIFAAASAVTIIEAKRRSR
Ga0126383_105408351	3300010398	Tropical Forest Soil	MKAPWTDPSLRELLALAALAAFGCGLALAQGDFLFAVVFCAASVVTIIEAIRRSR
Ga0126383_122264871	3300010398	Tropical Forest Soil	MDPHLRELLALAMLAAFSCGLALAQDDFLFVAIFAAASAVTI
Ga0126383_124967801	3300010398	Tropical Forest Soil	MKLPWMDDPHFRELLALAMLAAFGCGFALAQGHFLFVGIFAAASAVTIIEAIRRSR*
Ga0124850_10026742	3300010863	Tropical Forest Soil	MKLPWKDPHLLELLALAMLAAFGCGLALAQGDFLFVGIFAATSAVTIIEAIRRSR*
Ga0138513_1000678431	3300011000	Soil	MNAPWRDPGLRELLALAALAAFGGGLALARDDLMFTAIVAAACAVTIVGVMRRLR*
Ga0137364_103930632	3300012198	Vadose Zone Soil	MKAPWTDPDLRELFTLSMLASFGCGLALAVNDLLFAAIFAAAIAVTIIEGT
Ga0137382_102782452	3300012200	Vadose Zone Soil	MKAPWSDPGLQELLALGALAIFGCGLALAQDDFVFAAIFAVESATVIAEALRRSR*
Ga0137382_104715801	3300012200	Vadose Zone Soil	MKAPWTDPGLRELLALAVLAAFGFGLALARDDLMFTAIFAAACAVTIVGVMRRLR*
Ga0137380_111515463	3300012206	Vadose Zone Soil	MKAPWTDPGVRELVGLSALAALSCGLASAHGDFLFGAIFGTACAMTIVEAIRRLR*
Ga0137381_109286451	3300012207	Vadose Zone Soil	MKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGAASAMTIIEVIRRLR*
Ga0137377_106616371	3300012211	Vadose Zone Soil	NMKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGTACAMTIVEAIRRLR*
Ga0137377_111653411	3300012211	Vadose Zone Soil	NMKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGAASAVTIIEGIRRLR*
Ga0137367_104248462	3300012353	Vadose Zone Soil	MKPPWMDPRLQELVALAALAAFGCGLALAQGDLMFVAIFAAACAVIIIEAIRRLR*
Ga0137358_100449311	3300012582	Vadose Zone Soil	MKAPWTDPGVRELVGLSALAALGCGLASAHGDFLFGAIFGAASAVTIIEGIRRLR*
Ga0137358_102657491	3300012582	Vadose Zone Soil	MKAPWSDPGLQELLALGALAIFGCGLALAQDDFVFAAIFAVESATVIAE
Ga0137358_103059282	3300012582	Vadose Zone Soil	MRAAERIESAQMGAPWTDPVLRELVALAALAAFGCGLALARGDLLFLSIFGAASAVTIIEAVRRSR*
Ga0137358_109117472	3300012582	Vadose Zone Soil	MKAPWTDPGLRELLALAVVAAFGCGLALAQDNLFFAAIFAAASAVVIVEALRRFR*
Ga0137396_108682271	3300012918	Vadose Zone Soil	TCEMKAPWSDPGLPELLALGALAIFGCGLALAQDDVVFAAIFAVESATVIAEALRRSR*
Ga0137359_113367081	3300012923	Vadose Zone Soil	ALAALAAFGRGLALAQDDFIFAAIFAGESAMVIAAELRRLR*
Ga0137413_117046591	3300012924	Vadose Zone Soil	MKAPWTDPGLRELLALAALAAFGGGLPLARDDLIFTAIFAAACAFPIIGVMHRLR
Ga0126375_108373533	3300012948	Tropical Forest Soil	PFQMKAPWTDPTLRELVALGALAAFGCGLALARGDLLFLSIFGAASAVTIIETVRRSR*
Ga0126375_112132272	3300012948	Tropical Forest Soil	EYAAGMMKAPWIDPALRELLRLAALAAFGCGLALAQSDLLFLAIFAAASVVTIIEAVRRSREGGRQ*
Ga0126369_112404752	3300012971	Tropical Forest Soil	LGSGTIRIQMKAPWTDPSLRELLALAALAAFGCGLALAQGDFLFAVVFCAASVLTIIEAIRRSR*
Ga0132258_100797278	3300015371	Arabidopsis Rhizosphere	MKAPWTDPGLRELLALAALAALGCGLAWAQGEFFFGAIFAAASTMIIVEALRRFR*
Ga0132257_1001137176	3300015373	Arabidopsis Rhizosphere	MKARWTDPGLRELLALAALAALGCGLAWAQGEFFFGAIFAAASTMIIVEALRRFR*
Ga0182036_116795021	3300016270	Soil	MKLPWMDDPHFRELLALAMLAAFGCGLALAQGDFLFVVIFAATSAVTIIEAIRRSR
Ga0182032_103236682	3300016357	Soil	MKLPWMDDPHFRELLALVMLAAFGCGLALAQGNFLFVVIFAATSAVTIIEAIRRSR
Ga0182032_118541751	3300016357	Soil	MKLPWMDPHLPELLTLAVLAAFGCGLALAERHFLFVGIFAAASAVTIIEAIGR
Ga0182039_110457001	3300016422	Soil	MKEPWMDPHVRQLFTLAVLAAFGCGLALAERHFLFVGIFAAASAVTIIEAIGRLR
Ga0066667_116255391	3300018433	Grasslands Soil	MKAPWTDPDLRELFTLSMLASFGCGLAAVNDLLFAAIFAAAIAVTIIEGTMRQSR
Ga0066669_101658861	3300018482	Grasslands Soil	MKAPWTDPGLRELFALSMLASFGCALALAVNDLLFAAIFAAAIAVPISG
Ga0066669_105387762	3300018482	Grasslands Soil	MKAPWTDPDLRELFTLSMLASFGCGLALAVNDLLFAAIFAAAIAVTIIEGTMRQLR
Ga0173482_107840101	3300019361	Soil	MKAPWTDPGLWELFALLALAALGFGLALARDDLMFTSIFAAACGVSIV
Ga0179590_10540621	3300020140	Vadose Zone Soil	CFSNMRAAERIESAQMGAPWTDPVLRELVALAALAAFGCGLALARGDLLFLSIFGAASALTIIEAVRRSR
Ga0210407_103405774	3300020579	Soil	MKAPWSDPGLRELLALAALAAFGCGLALAQDDFAFAVIFAVESALIIVEALRRLR
Ga0210403_101402703	3300020580	Soil	MASRPGTSEMKAPWSDPGLRELLALAALAAFGCGVALVQGEFFFGAIFAAASALIIFEVLRRFR
Ga0210403_101756211	3300020580	Soil	RHQSGRTRALRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0210399_102471942	3300020581	Soil	MKAPWTDPGLRELLALAALAASGCGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0210399_113658401	3300020581	Soil	DPGLRELLALAALAAFGCGLALAQDDFAFAVIFAVESALIIVEALRRLR
Ga0210406_112314952	3300021168	Soil	LTKGTNLRDERVAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0210387_107142532	3300021405	Soil	MNAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIIGVMRRLR
Ga0126371_105773611	3300021560	Tropical Forest Soil	MKEPWTDPSLRELLALAALAAFGCGLALARGDLLFLGIFGAASAVTIIEAIRRSR
Ga0126371_106393032	3300021560	Tropical Forest Soil	MKAPWTDPGLRELLALAALAALGCGLALAQGEFFFGAIFAAANALIIVEALRHFR
Ga0126371_109253382	3300021560	Tropical Forest Soil	MKAPWTDPSLRELLALAALAAFGCGLALAQGDFLFAFVFCAASVVTIIEAIRRSR
Ga0126371_130424922	3300021560	Tropical Forest Soil	QMKAPWTDPSFRELVALAALGAFGCGLALALDDLLFATIFAAASAVTIIEAKRRSR
Ga0242658_10352401	3300022530	Soil	MKAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACSVTIVGVMRRLR
Ga0242654_103818171	3300022726	Soil	KAPICEMKAPWTDPGLRELLALAALAAFGGGLALARGDLMFTAIFAAACAFTIVGVMRRL
Ga0207692_103824871	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKAPWTDPGLRELFALSMLASFGCGLALAVNDLLFAAIFAAAIAVTIIGGAMRQLR
Ga0207685_108374801	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TSLQKAPICEMNAPWTDPGLRELLALAALAAFGAGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0207693_101314171	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LWTDPGLRELLALAALAVGGGCLALARDDSLFAVIFAVASATVIAENAVR
Ga0207693_111782222	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LLGGSGLTSLQKAPICEMNAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0209156_101441092	3300026547	Soil	MKAPWTDPGLHELFALSMLASFGCALALAVNDLLFAAIFAAAIAVTIIEGTMRQLR
Ga0209474_101371422	3300026550	Soil	MKAPWTDPGLHELFALSMLASFGCALALAVNDLLFAAIFAAAIAVTIIGG
Ga0179587_101415782	3300026557	Vadose Zone Soil	MKAPWTDPGLRELLALAALAAFGGGLALARDDLMFTAIFAAACAVTIVGVMRRLR
Ga0307282_100501984	3300028784	Soil	MKAPWTDPGLRELLALAALAASGCGLALARDDLMFTAIFAAAWAVTIVGLMRYLR
Ga0307292_102453532	3300028811	Soil	MKAPWTDPSLRELLALAALAAFGGGLALARDDLMFTAIFAAAWAVTIVGLMRYLR
Ga0307277_100126872	3300028881	Soil	MKAPWTDPGLRELLALAVLAAFGFGLALARDDLMFTAIFAAAGAVTIVGLMRHLR
Ga0307277_103312162	3300028881	Soil	MKAPWTDPGLRELLALAALAAFGCGLSLAQGDFLFAAIFAAASALIIVEALRRLR
Ga0307308_106054821	3300028884	Soil	MKAPWTDPGLRELLALAALAAFGCGLALAQGEFFFSAIFAAASALIIVEALRRFR
Ga0318541_100915343	3300031545	Soil	MKLPWMDDPHFRELLALVMLAAFGCGLALAQGDFLFVVIFAATSAVTIIEAIRRSR
Ga0310915_102437451	3300031573	Soil	MDPHLRELLALAVLAAFGCGLALAQDDFLFVAIFAAASAVTIVEAIRRSR
Ga0310915_103363002	3300031573	Soil	SSFEPVVRANGVRMKLPWMDPHLPELLTLAVLAAFGCGLALAERHFLFVGIFAAASAVTIIEAIGRLR
Ga0318523_102696881	3300031798	Soil	DDPHFRELLALVMLAAFGCGLALAQGDFLFVVIFAATSAVTIIEAIRRSR
Ga0306919_103472922	3300031879	Soil	MKLPWMDPHLPELLTLAVLAAFGCGLALAERHFLFVGIFAAASAVTIIEAIGRLR
Ga0306925_102403223	3300031890	Soil	MKEPWMDPHVRQLFTLAVLAAFGCGLALAEDHFLFVGIFAAASAVTIIEAIGRSR
Ga0306925_102643503	3300031890	Soil	MKLPWMDPHLPELLTLAVLAAFGCGLALAERHFLFVGIFAAASAVTII
Ga0306925_102717772	3300031890	Soil	LRELVALAALAAFGCGLALALGDLLFATIFGAAGAVTIIEARRRSR
Ga0310912_105456441	3300031941	Soil	LRELVALAMLAAFGCGFAVAQGHFLFVGIFAAASAVTIIEATRRSR
Ga0310913_102839361	3300031945	Soil	QMKAPWTDPSLRELVALAALAAFGCGLALALGDLLFATIFGAAGAVTIIEARRRSR
Ga0306926_118300162	3300031954	Soil	MKAPWTDPSLRELVALAALAAFGCGLALALGDLLFATIFGAAGAVTIIEARRRSR
Ga0306926_122738311	3300031954	Soil	MKAPWTDPSLRELLALAALAALGCGLALAQSDLFFLSLFGAACAVTIIEAVRRSR
Ga0318570_104065241	3300032054	Soil	TMKLPWMDDPHFRELLALVMLAAFGCGLALAQGDFLFVVIFAATSAVTIIEAIRRSR
Ga0318577_102445582	3300032091	Soil	FEPVVRANGVRMKLPWMDPHLPELLTLAVLAAFGCGLALAERHFLFVGIFAAASAVTIIEATRRSR
Ga0307472_1012717281	3300032205	Hardwood Forest Soil	PGLRELLALAALAGLGCGLALAQGEFFFGAIFAAASALIIVEALRRFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences