Metagenome Family F046157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046157
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	46 residues
Representative Sequence	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRADYMS
Number of Associated Samples	97
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	69.54 %
% of genes from short scaffolds (< 2000 bps)	68.87 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (70.861 % of family members)
Environment Ontology (ENVO)	Unclassified (85.430 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (72.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.84% β-sheet: 0.00% Coil/Unstructured: 62.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF02583	Trns_repr_metal	23.84
PF09851	SHOCT	19.87
PF13473	Cupredoxin_1	1.99
PF00753	Lactamase_B	1.32
PF01522	Polysacc_deac_1	0.66
PF11127	DUF2892	0.66
PF00986	DNA_gyraseB_C	0.66
PF00702	Hydrolase	0.66
PF00440	TetR_N	0.66
PF00578	AhpC-TSA	0.66
PF07681	DoxX	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	23.84
COG0187	DNA gyrase/topoisomerase IV, subunit B	Replication, recombination and repair [L]	0.66
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.66
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.34 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.77 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	7.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	19.87 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	7.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	19.87 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	7.28 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.99 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	10.60 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	9.27 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	7.28 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix	10.60 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	9.27 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	7.28 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidithrix ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	10.60 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	9.27 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	7.28 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.66 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Acidithrix ferrooxidans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	10.60 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	9.27 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	7.28 %
Nocardia sp. 852002-20019_SCH5090214	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. 852002-20019_SCH5090214	0.66 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108034587	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005764\|Ga0066903_103677003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300009038\|Ga0099829_10004416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8363	Open in IMG/M
3300009038\|Ga0099829_10544656	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300010048\|Ga0126373_12187302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	614	Open in IMG/M
3300010048\|Ga0126373_13160216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	513	Open in IMG/M
3300010360\|Ga0126372_11170480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	792	Open in IMG/M
3300010366\|Ga0126379_12921083	Not Available	572	Open in IMG/M
3300012096\|Ga0137389_11635983	Not Available	540	Open in IMG/M
3300012205\|Ga0137362_10642635	All Organisms → cellular organisms → Bacteria → Terrabacteria group	914	Open in IMG/M
3300012210\|Ga0137378_10071584	All Organisms → cellular organisms → Bacteria	3148	Open in IMG/M
3300012349\|Ga0137387_10531593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	853	Open in IMG/M
3300012356\|Ga0137371_10235338	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1431	Open in IMG/M
3300012359\|Ga0137385_10943295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	713	Open in IMG/M
3300016294\|Ga0182041_10079372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2340	Open in IMG/M
3300016357\|Ga0182032_10638219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300016371\|Ga0182034_11018458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	716	Open in IMG/M
3300016387\|Ga0182040_10872508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	745	Open in IMG/M
3300016404\|Ga0182037_11879986	Not Available	536	Open in IMG/M
3300016422\|Ga0182039_11175358	Not Available	692	Open in IMG/M
3300016422\|Ga0182039_11906443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	546	Open in IMG/M
3300016445\|Ga0182038_11719244	Not Available	565	Open in IMG/M
3300027857\|Ga0209166_10590022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	565	Open in IMG/M
3300027986\|Ga0209168_10072541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1804	Open in IMG/M
3300028884\|Ga0307308_10553116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	552	Open in IMG/M
3300029999\|Ga0311339_10995652	Not Available	786	Open in IMG/M
3300031543\|Ga0318516_10118385	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300031544\|Ga0318534_10352975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300031546\|Ga0318538_10301136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	864	Open in IMG/M
3300031549\|Ga0318571_10125463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300031561\|Ga0318528_10440143	All Organisms → cellular organisms → Bacteria → Terrabacteria group	700	Open in IMG/M
3300031561\|Ga0318528_10621065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	579	Open in IMG/M
3300031564\|Ga0318573_10451851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	691	Open in IMG/M
3300031572\|Ga0318515_10293669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300031572\|Ga0318515_10305629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300031668\|Ga0318542_10714101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	524	Open in IMG/M
3300031670\|Ga0307374_10000500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75244	Open in IMG/M
3300031681\|Ga0318572_10453642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	763	Open in IMG/M
3300031681\|Ga0318572_10467480	Not Available	751	Open in IMG/M
3300031713\|Ga0318496_10726773	Not Available	547	Open in IMG/M
3300031724\|Ga0318500_10345442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	734	Open in IMG/M
3300031724\|Ga0318500_10484625	Not Available	621	Open in IMG/M
3300031744\|Ga0306918_10984604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	655	Open in IMG/M
3300031747\|Ga0318502_10990876	Not Available	512	Open in IMG/M
3300031763\|Ga0318537_10309561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	584	Open in IMG/M
3300031764\|Ga0318535_10515586	Not Available	531	Open in IMG/M
3300031764\|Ga0318535_10545040	Not Available	515	Open in IMG/M
3300031765\|Ga0318554_10566245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	641	Open in IMG/M
3300031769\|Ga0318526_10451263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	525	Open in IMG/M
3300031771\|Ga0318546_10767070	Not Available	679	Open in IMG/M
3300031771\|Ga0318546_10955736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	603	Open in IMG/M
3300031777\|Ga0318543_10214205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300031778\|Ga0318498_10281997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	747	Open in IMG/M
3300031778\|Ga0318498_10427264	Not Available	587	Open in IMG/M
3300031782\|Ga0318552_10682381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	524	Open in IMG/M
3300031792\|Ga0318529_10408206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	632	Open in IMG/M
3300031793\|Ga0318548_10675202	Not Available	501	Open in IMG/M
3300031796\|Ga0318576_10546798	Not Available	546	Open in IMG/M
3300031797\|Ga0318550_10255627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300031797\|Ga0318550_10272632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	821	Open in IMG/M
3300031798\|Ga0318523_10589635	Not Available	547	Open in IMG/M
3300031805\|Ga0318497_10890907	Not Available	500	Open in IMG/M
3300031819\|Ga0318568_10268047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1058	Open in IMG/M
3300031819\|Ga0318568_10552337	Not Available	718	Open in IMG/M
3300031819\|Ga0318568_10821917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	576	Open in IMG/M
3300031821\|Ga0318567_10470748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	713	Open in IMG/M
3300031821\|Ga0318567_10896883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300031831\|Ga0318564_10047269	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300031845\|Ga0318511_10460361	Not Available	586	Open in IMG/M
3300031846\|Ga0318512_10358928	All Organisms → cellular organisms → Bacteria → Terrabacteria group	729	Open in IMG/M
3300031846\|Ga0318512_10391177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	698	Open in IMG/M
3300031846\|Ga0318512_10448760	Not Available	651	Open in IMG/M
3300031846\|Ga0318512_10489264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	623	Open in IMG/M
3300031859\|Ga0318527_10197104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300031859\|Ga0318527_10362325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. 852002-20019_SCH5090214	618	Open in IMG/M
3300031879\|Ga0306919_10861149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	695	Open in IMG/M
3300031893\|Ga0318536_10398383	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300031893\|Ga0318536_10564544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	570	Open in IMG/M
3300031894\|Ga0318522_10398124	Not Available	522	Open in IMG/M
3300031897\|Ga0318520_10688202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	638	Open in IMG/M
3300031912\|Ga0306921_11859328	All Organisms → cellular organisms → Bacteria → Terrabacteria group	646	Open in IMG/M
3300031941\|Ga0310912_10923058	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300031945\|Ga0310913_11121884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	549	Open in IMG/M
3300031947\|Ga0310909_10327132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286	Open in IMG/M
3300031947\|Ga0310909_11673631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	503	Open in IMG/M
3300031954\|Ga0306926_10037897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5703	Open in IMG/M
3300031954\|Ga0306926_10353264	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300031954\|Ga0306926_12939601	Not Available	511	Open in IMG/M
3300032008\|Ga0318562_10665317	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300032010\|Ga0318569_10081956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1438	Open in IMG/M
3300032039\|Ga0318559_10455108	Not Available	597	Open in IMG/M
3300032043\|Ga0318556_10762626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	503	Open in IMG/M
3300032044\|Ga0318558_10685664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	512	Open in IMG/M
3300032052\|Ga0318506_10058528	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300032052\|Ga0318506_10484384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	548	Open in IMG/M
3300032055\|Ga0318575_10705120	Not Available	510	Open in IMG/M
3300032059\|Ga0318533_11197829	Not Available	556	Open in IMG/M
3300032066\|Ga0318514_10334772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	801	Open in IMG/M
3300032090\|Ga0318518_10052568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1942	Open in IMG/M
3300032090\|Ga0318518_10374362	All Organisms → cellular organisms → Bacteria → Terrabacteria group	731	Open in IMG/M
3300032091\|Ga0318577_10191181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300032091\|Ga0318577_10467948	Not Available	601	Open in IMG/M
3300032261\|Ga0306920_100438307	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300032261\|Ga0306920_100859512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1328	Open in IMG/M
3300032261\|Ga0306920_102269225	Not Available	753	Open in IMG/M
3300032261\|Ga0306920_102276494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans	751	Open in IMG/M
3300032261\|Ga0306920_102631349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	689	Open in IMG/M
3300033290\|Ga0318519_10562633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	690	Open in IMG/M
3300033290\|Ga0318519_10745980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.34%
Peat	Environmental → Terrestrial → Peat	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.69%
Loam	Environmental → Terrestrial → Soil → Loam	1.99%
Clay	Environmental → Terrestrial → Soil → Clay	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	85.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.99%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	70.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300026833	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1080345872	3300005332	Tropical Forest Soil	MSHAPEASGRGIPMWPKDALRIAFGIIWLIDAVLKWLPGFRSD
Ga0066903_1036770031	3300005764	Tropical Forest Soil	MSQGPVASGRCAPAWPKDVLRITFGVIWLIDATLKWLPGFR
Ga0099829_100044161	3300009038	Vadose Zone Soil	MAGTGTATGRCSPAWPKDALRVTFGVIWLIDATLKWLPGFRSGYMGTIMGQADGQPSW
Ga0099829_105446562	3300009038	Vadose Zone Soil	MASTPAATSRGIPAWPKDALRVSFGIIWLIDAIFKWLPGFRRTT*
Ga0126373_101510091	3300010048	Tropical Forest Soil	MSAQQTVARPRPAWPKDALRISFGVIWLIDAVLKWLPGF*
Ga0126373_121873022	3300010048	Tropical Forest Soil	MAQGLVASGRCAPAWPKDALRIGFGIIWLIDAVLKWLPGFRSGYMD
Ga0126373_131602162	3300010048	Tropical Forest Soil	MAQDNVASGRCAPAWPKDALRIGFGVIWLIDAILKWLPGFKDSYMSTIMGI
Ga0126372_111704801	3300010360	Tropical Forest Soil	MAQGLVASGRCTPAWPKDALRIGFGIIWLIDAVLKWLPGFRSGYMDTIMGIRDGQPQGL
Ga0126379_129210832	3300010366	Tropical Forest Soil	MAQGHTTRGHPAPLWPKDALRISFGIIWLIDAVLKWLPGFRAGYMD
Ga0137389_116359831	3300012096	Vadose Zone Soil	MAGTGTATGRCSPAWPKDALRVTFGVIWLIDATLKWLPGFRSGYMGTIMGQADGQPSWLK
Ga0137362_106426351	3300012205	Vadose Zone Soil	MAPTQTASYRCPAWPKDALRISFGIIWLIDAVLKWLPGFRASYMDTIMGQ
Ga0137378_100715844	3300012210	Vadose Zone Soil	MSTTQGASKQVPAWPKDALRISFGIIWLIDAVLKWLPGFRSGYMGTI
Ga0137387_105315931	3300012349	Vadose Zone Soil	MAPAQAATRRCAPWPKDALRITFGIIWLVDAILKWLPGFR
Ga0137371_102353384	3300012356	Vadose Zone Soil	MSNEKVATGRCVPAWPKDALRISFGIIWLIDAALKWLPGFRADYMSTIMGQADGQ
Ga0137385_109432951	3300012359	Vadose Zone Soil	MSNEKVATGRCVPAWPKDALRISFGIIWLIDAVLKW
Ga0126369_130417791	3300012971	Tropical Forest Soil	MLREAVMSQGQQARARSAPAWPKDTLRIAFGGIWLIDATLKWLPGFRSSYMSVIMA
Ga0182041_100793721	3300016294	Soil	MTTAQEATGRCTPWPKDALRVSFGIIWLIDAILKWLPGFRAG
Ga0182032_106382191	3300016357	Soil	MAPTHEATGRCAPWPKDALRITFGIIWLIDAALKWLPGFRSSYMGVIMAE
Ga0182034_110184581	3300016371	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLK
Ga0182040_108725081	3300016387	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKW
Ga0182037_118799861	3300016404	Soil	MAQKQVASGRGTPAWPQDALRITFGIIWLIDASLKWLPGFRASY
Ga0182039_111753581	3300016422	Soil	MTDTGTQIQARCRTAWPKDALRIAFGVIWLIDATLKWLPGFKDSYMSTIMGIRDGQ
Ga0182039_119064432	3300016422	Soil	MSQEQQARAWSAPVWPKDTLRIAFGVIWLIDATLKWL
Ga0182038_117192441	3300016445	Soil	MAQKQVASGRGTPAWPQDALRITFGIIWLIDASLKWLPGFRASYMDTIMGEAQ
Ga0207728_1164391	3300026833	Tropical Forest Soil	MTDTGTQVQARCGPAWPKDALRIAFGVIWLIDATLKWLPGFKDSYMSTIMGIRDG
Ga0209166_105900222	3300027857	Surface Soil	MSNEKMAAGGCVPAWPKDALRVTFGVIWLIDAVLKWLPGF
Ga0209168_100725414	3300027986	Surface Soil	MSANQTATRGCASWPKDALRITFGIIWLIDAALKWLPGFRASYMSTIMGQADG
Ga0307308_105531162	3300028884	Soil	MAQAQAASGRCAPAWPKDALRISFGIIWLIDATLKWLPGFRASYMSTIMGEAQGSRAGSS
Ga0311339_109956521	3300029999	Palsa	MGSATPQKATGVPTWPKDALRVTFGVIWLIDAVLKWLP
Ga0318516_101183852	3300031543	Soil	MSEGKVASGRYMPAWPKDALRITFGVIWLVDAVLKWLPGFRASYMDTIMG
Ga0318516_106750711	3300031543	Soil	MSQGQQAHAPSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSS
Ga0318534_103529753	3300031544	Soil	MSQGPMASGRCAPAWPKDVLRIAFGVIWLIDAALKWLPGFRATY
Ga0318538_103011362	3300031546	Soil	MSPVQVASRRCTPAWPKDALRISFGVIWLIDAVLKWLPGFRASYMDTIMGEAQG
Ga0318571_101254633	3300031549	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRADYMS
Ga0318571_104581121	3300031549	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIVS
Ga0318528_102988892	3300031561	Soil	MSQGQQARARPAPAWPKDTLRIAFGVIWLIDASLKW
Ga0318528_104401433	3300031561	Soil	MAPTQQATARCVPAWPKDALRISFGIIWLIDATLKW
Ga0318528_106210651	3300031561	Soil	MSQGPMASGRCAPAWPKDVLRIAFGVIWLIDAALK
Ga0318573_104518512	3300031564	Soil	MSQVQVASRRCAPAWPKDALRISFGIIWLIDAVLKWLPGFKDSYM
Ga0318573_105029382	3300031564	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYM
Ga0318515_102936691	3300031572	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGYMSTIMG
Ga0318515_103056293	3300031572	Soil	MAPTQQATARCVPAWPKDALRISFGIIWLIDAVLK
Ga0310915_107062903	3300031573	Soil	MSQEQQARAWSAPVWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMS
Ga0318555_105393052	3300031640	Soil	MSPGQQARTWSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSS
Ga0318542_106276751	3300031668	Soil	MSQEQQARAWSAPVWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQGQP
Ga0318542_107141011	3300031668	Soil	MSQGQVGSGRCAPAWPKDALRIAFGVIWLIDATLKWLPGFRA
Ga0307374_1000050050	3300031670	Soil	MSPATATTARPCSAWPKDALRITFGVIWLIDAALKAATAGRQR
Ga0318574_106391181	3300031680	Soil	MSQGQQARTWSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSY
Ga0318572_103983293	3300031681	Soil	MSQGQQARAPSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQGQP
Ga0318572_104536422	3300031681	Soil	MSPGNVASGRCSPAWPKDALRIAFGVIWLIDAVLKWLPGFRASYMDTIMGEAQD
Ga0318572_104674802	3300031681	Soil	MSQGPVASGRYLPAWPKDALRIAFGVIWLIDAVLKWLPGFRASYMD
Ga0318496_107267732	3300031713	Soil	MSPGNVASGRCSPAWPKDALRIAFGVIWLIDAVLK
Ga0318500_103454423	3300031724	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKW
Ga0318500_104846252	3300031724	Soil	MVQRQVASGRGTPAWPQDALRIAFGIIWLIDASLKWLPGFRASYMDTIMGEAQ
Ga0318501_100352881	3300031736	Soil	MSQEQQARAWSAPVWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGE
Ga0318501_106416731	3300031736	Soil	MSPGQQARTCSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMG
Ga0306918_109846041	3300031744	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGYMST
Ga0318502_106195902	3300031747	Soil	MSQGPMARGRCAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEA
Ga0318502_109908762	3300031747	Soil	MSPVHGASGRFAPAWPKDALRIAFGVIWLIDATLKWLPGFRASYMDTIMG
Ga0318492_102543713	3300031748	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIM
Ga0318537_103095611	3300031763	Soil	MSQGPMASGRCAPAWPKDVLRIAFGVIWLIDAALKWLPGFRATYMSVI
Ga0318535_103530251	3300031764	Soil	MSQGQQARARPAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQG
Ga0318535_105155861	3300031764	Soil	MAQKRVASGRGTPAWPQDALRITFGIIWLIDASLKWLPGFRASYMDT
Ga0318535_105450401	3300031764	Soil	MSPGNVASGRCSPAWPKDALRIAFGVIWLIDAVLKWL
Ga0318554_103789452	3300031765	Soil	MSQGQQARAQPAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYM
Ga0318554_105662452	3300031765	Soil	MSEGKVASGRYMPAWPKDALRITFGVIWLVDAVLKWL
Ga0318554_105804981	3300031765	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQGQ
Ga0318526_100085455	3300031769	Soil	MSQEQQARAWSAPVWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQG
Ga0318526_104512632	3300031769	Soil	MTQPQVASGRCAPAWPKDALRIGFGIIWLIDAVLKWLPGFKDSYMSTIMGI
Ga0318521_100658114	3300031770	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWL
Ga0318521_105448392	3300031770	Soil	MSQGQQARAQPAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGE
Ga0318546_107670701	3300031771	Soil	MAVSDASIRRCPPAWPKDALRITFGVIWAIDATLKWLPGFRSGYLDAIKG
Ga0318546_109557361	3300031771	Soil	MAPAQQATGRCNPWPKDALRVSFGIIWLIDAVLKWLPGFRAGYMGVIMGEAQGQP
Ga0318543_102142053	3300031777	Soil	MAPTHEATGRCAPWPKDALRITFGIIWLIDAALKWLPGFRSSYM
Ga0318498_102819971	3300031778	Soil	MTTAQEATGRCTPWPKDALRVSFGIIWLIDAVLKWL
Ga0318498_104272642	3300031778	Soil	MSPGNVASGRCSPAWPKDALRIAFGVIWLIDAVLKWLPGFRASYMDTIMGEAQG
Ga0318566_106752171	3300031779	Soil	MSQGQQARAWPAPAWPKDTLRIAFGVIWLIDAALKWLPGFRSSYMSVI
Ga0318547_105580931	3300031781	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMS
Ga0318552_106823812	3300031782	Soil	MAQQTIASGRSTPAWPKDALRIGFGVIWLIDALLKWLPGFKDSYMS
Ga0318529_104082062	3300031792	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGYMSTIMGEAQSQP
Ga0318548_106752021	3300031793	Soil	MSQVQVASRRCAPAWPKDALRISFGIIWLIDAVLKWLPGFKDSYMS
Ga0318576_105467981	3300031796	Soil	MSQVQVASGRCAPAWPKDALRISFGIIWLIDAVLKWLPGFKDSYMSTIMG
Ga0318550_102556272	3300031797	Soil	MSDTQVAERRPLPLWPKDALRISFGIIWLIDATLKWLPGFRADYMGTIMGQA
Ga0318550_102726322	3300031797	Soil	MSEGKVASGRYMPAWPKDALRITFGVIWLVDAVLK
Ga0318523_105896352	3300031798	Soil	MSPVKVASGRCVPAWPKDALRVSFGVIWLIDAVLK
Ga0318497_108909072	3300031805	Soil	MSQVQVASGRCAPAWPKDALRISFGIIWLIDAGLKWLPGFKDSYMSTI
Ga0318568_102680473	3300031819	Soil	MSQVQVASGRCAPAWPKDALRISFGIIWLIDAGLKWLPGFKDSYMST
Ga0318568_105523371	3300031819	Soil	MAQPQAASGRCTPAWPKDALRITFGVIWLIDATLKWLPGFRAS
Ga0318568_108219171	3300031819	Soil	MAPTQAATARCMPAWPKDALRISFGIIWLIDAVLK
Ga0318567_104707483	3300031821	Soil	MSPVPGASGRCTPAWPKDALRITFGVIWLIDATLKWLP
Ga0318567_108428922	3300031821	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFR
Ga0318567_108968831	3300031821	Soil	MSQTQAAGRPYTAWPKDALRITFGVIWLIDAVLKWLPGFRAGYMS
Ga0318564_100472694	3300031831	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGY
Ga0318511_103527071	3300031845	Soil	MSQGQQARARPAPAWPKDTLRIAFGVIWLIDATLK
Ga0318511_104603612	3300031845	Soil	MSQVQVASGRYLPAWPKDALRISFGVIWLIDAVLKWLPGFRAS
Ga0318512_103589282	3300031846	Soil	MAAGQQAAARSLPAWPKDAIRISFGIVWLIDATLKWLPGFRASYMSTIMGEAQ
Ga0318512_103911772	3300031846	Soil	MSPGNVASGRCSPAWPKDALRIAFGVIWLIDAVLKWLPGFRAAAV
Ga0318512_104487601	3300031846	Soil	MSDTQVAERRPLPLWPKDALRISFGIIWLIDATLKWLPGFRADYMGTIMGQAQ
Ga0318512_104892642	3300031846	Soil	MTTAQEATGRCTPWPKDALRVSFGIIWLIDAVLKWLP
Ga0318527_101971043	3300031859	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWL
Ga0318527_103623252	3300031859	Soil	MSDTQVAERRPLPLWPKDALRISFGIIWLIDATLKWLPG
Ga0318495_104664931	3300031860	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQGQP
Ga0306919_108611492	3300031879	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRADYMSTIMGEAQS
Ga0318536_103983831	3300031893	Soil	MSQGPMASGRCSPAWPKDVLRITFGVIWLIDATLKWLPGFRASYMSVIMA
Ga0318536_105286442	3300031893	Soil	MSQGQQARAWPAPAWPKDTLRIAFGVIWLIDAALKWLPGFRSSYMSVIMGEA
Ga0318536_105645441	3300031893	Soil	MAPAQEATGRCTPWPKDALRVSFGIIWLIDAFLKWLPGFRSGY
Ga0318522_103981241	3300031894	Soil	MSQVQVASGRCAPAWPKDALRISFGIIWLIDAGLKWLPGFKD
Ga0318551_106788471	3300031896	Soil	MSQGQQARAPSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQG
Ga0318520_106882022	3300031897	Soil	MSDTQVAERRPLPLWPKDALRISFGIIWLIDATLKWLPGFRADY
Ga0306921_118593281	3300031912	Soil	MTDTGTQIQARCRTAWPKDALRIAFGVIWLIDATLKWLPGFKDSYMSTIMGI
Ga0310912_109230583	3300031941	Soil	MSQGPMASGRCASAWPKDVLRIAFGVIWLIDATLKWL
Ga0310913_111218842	3300031945	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFR
Ga0310910_109352372	3300031946	Soil	MSQGQQARAPSAPAWPKDTLRIAFGVIWLIDATLKWLPG
Ga0310909_103271321	3300031947	Soil	MSPVQVASRRCTPAWPKDALRISFGVIWLIDAVLKWLPGFRASYMDTIMGE
Ga0310909_116736311	3300031947	Soil	MLREAVMSQGPMASGRCSPAWPKDALRITFGVIWLIDAT
Ga0306926_100378977	3300031954	Soil	MAPTHEATGRCAPWPKDALRITFGIIWLIDAALKWLPGFRSSYMGVIMAEAQGQP
Ga0306926_103532644	3300031954	Soil	MTTAQEATGRCTPWPKDALRVSFGIIWLIDAVLKWLPGFRAG
Ga0306926_129396011	3300031954	Soil	MKGWLEEVAMAQNAAPSERCVAAWPKDALRISFGIIWAIDAGLKWAP
Ga0318562_106653172	3300032008	Soil	MSPVKVASGRCVPAWPKDALRVSFGVIWLIDAVLKW
Ga0318569_100819563	3300032010	Soil	MSPVQVASRRCTPAWPKDALRISFGVIWLIDAVLKWLPGFRASYMDTIMG
Ga0318507_103086012	3300032025	Soil	MSQGQQAHAPSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSV
Ga0310911_107099991	3300032035	Soil	MSQGQQARAPSAPAWPKDALRIAFGVIWLIDATLKWLPGFRSTYMSVIMGEA
Ga0318559_103258583	3300032039	Soil	MSQGQQARARSAPAWPKDALRIAFGVIWLIDATLKWLPGFRSSYMSVI
Ga0318559_104551081	3300032039	Soil	MSPVPGASGRCTPAWPKDALRITFGVIWLIDATLK
Ga0318556_106767821	3300032043	Soil	MSQGQQARARPAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQGQPG
Ga0318556_107626262	3300032043	Soil	MSQGPMASGRCSPAWPKDVLRITFGVIWLIDATLKWLPGFRA
Ga0318558_106856641	3300032044	Soil	MAPTQQATARCVPAWPKDALRISFGIIWLIDAVLKWLPGFRTDYMGAI
Ga0318506_100585284	3300032052	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGYMSTI
Ga0318506_103116792	3300032052	Soil	MSQGQQARARLAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGE
Ga0318506_104843841	3300032052	Soil	MAPAQQATGRCNPWPKDALRVSFGIIWLIDAVLKWLPGFR
Ga0318575_107051202	3300032055	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRADYMSTIMGEAQSQPGWLQ
Ga0318533_102789213	3300032059	Soil	MSQGQQARAQPAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQ
Ga0318533_111978291	3300032059	Soil	MSEGKVASGRYMPAWPKDALRITFGVIWLVDAVLKWMPGFRASYMDTIMGEAQG
Ga0318514_103347723	3300032066	Soil	MSPVPGASGRCTPAWPKDALRITFGVIWLIDATLKWLPGFRASYMSVIMAE
Ga0318524_101595034	3300032067	Soil	MSQGQQARAWPAPAWPKDTLRIAFGVIWLIDATLKWLP
Ga0318553_104652332	3300032068	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMSEAQ
Ga0306924_108196311	3300032076	Soil	MSQGQQARAPSGPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEA
Ga0318518_100525683	3300032090	Soil	MSPVQVASRRCTPAWPKDALRISFGVIWLIDAVLKWLPGFRASYMDTIMGEAQ
Ga0318518_103743622	3300032090	Soil	MSQTQAAGRPYTAWPKDALRITFGVIWLIDAVLKWLPGFRAGYMSVIMGEAA
Ga0318518_106885081	3300032090	Soil	MSQGQQARARSAPAWPKDALRIAFGVIWLIDATLKWLPGFRSSYMSVIMGEAQ
Ga0318577_101911811	3300032091	Soil	MSQGQVASGRSAPAWPKDALRIAFGVIWLIDATLKWLPGFRADYM
Ga0318577_104679482	3300032091	Soil	MSPVQVASRRCTPAWPKDALRISFGVIWLIDAVLKWLPGFRASYMDTIM
Ga0306920_1004383071	3300032261	Soil	MSQGPMASGRCAPAWPKDVLRIAFGVIWLIDAALKWLPGFRATYMSV
Ga0306920_1008595121	3300032261	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRAGYMSTIMGEAQSQPGWL
Ga0306920_1022692252	3300032261	Soil	MSQGTVASGRYLPAWPKDALRIAFGVIWLIDAVLK
Ga0306920_1022764941	3300032261	Soil	MSQGQVASGRCAPAWPKDALRITFGVIWLIDATLKWLPGFRADYMSTIMG
Ga0306920_1026313492	3300032261	Soil	MSDTQVAERRPLPLWPKDALRISFGIIWLIDATLKWLPGFRA
Ga0306920_1029433361	3300032261	Soil	MSQGQQARARSAPAWPKDTLRIAFGVIWLIDATLKWLPGFRSSYMSVI
Ga0306920_1041477312	3300032261	Soil	MSQGQQARVRSAPAWPKDILRIAFGVIWLIDATLKWLPGFRSSYMSVI
Ga0318519_105626332	3300033290	Soil	MSEGKVASGRYMPAWPKDALRITFGVIWLVDAVLKWLPGFRASYMDTIMGE
Ga0318519_107459801	3300033290	Soil	MSQGPMASGRCAPAWPKDVLRIAFGVIWLIDAALKWLPGFRATYM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046157

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences