Metagenome Family F046209

Basic Information
Family ID	F046209
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	41 residues
Representative Sequence	NEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Number of Associated Samples	8
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	6
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules (57.616 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.71% β-sheet: 0.00% Coil/Unstructured: 44.29%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00999	Na_H_Exchanger	1.54
PF07727	RVT_2	0.77
PF00076	RRM_1	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.54
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.54
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.54
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.54
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.54

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	57.62%
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	42.38%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006943	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW	Host-Associated	Open in IMG/M
3300006944	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW	Host-Associated	Open in IMG/M
3300021320	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3	Host-Associated	Open in IMG/M
3300021321	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1	Host-Associated	Open in IMG/M
3300021324	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4	Host-Associated	Open in IMG/M
3300021327	Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2	Host-Associated	Open in IMG/M
3300027296	Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes)	Host-Associated	Open in IMG/M
3300027357	Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099822_10095073	3300006943	Root Nodules	MKMTSLKIKKSDNKELKKKYLKTLRQELNMMIKILQTKIQEHN*
Ga0099822_10316241	3300006943	Root Nodules	RKSEKIDFKKKILKTLREELNMMSKILQTPFQEHN*
Ga0099822_10331351	3300006943	Root Nodules	NENEEFKKIRKSDKIDFKKKILKTLREELNMMSKILQKPFQEHN*
Ga0099822_10333873	3300006943	Root Nodules	MKIKVEKIRESGKIDFKKKILKTLREELNMMSKILQKPFQEHN*
Ga0099822_10356721	3300006943	Root Nodules	IRKSEKIDFKKKILKTLREELNMMSKILQKPFKEHN*
Ga0099822_10365191	3300006943	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSK
Ga0099822_10377173	3300006943	Root Nodules	LKKIRKSEKIDFKKKFLKTLREELNMMNKILQKPFQEHN*
Ga0099822_10400131	3300006943	Root Nodules	IIIQEVNENEEFKKIRKSDKIDFKKKILKTLREELNMMSKIVQKPFQEHN*
Ga0099822_10492001	3300006943	Root Nodules	SKESVKIIIQEVNENEELKKSMKSGKIDFKKKILKTLREELNMMSKILQKTFQEHN*
Ga0099822_10601862	3300006943	Root Nodules	VSKLVIQEVNENEEFKKIRKSEKIDFKKKFLKTLREELNMMSKILQKSF*
Ga0099822_10614014	3300006943	Root Nodules	MSKSEKIDFKKMILKTLREELNMMSKILQKPFQEHH*
Ga0099822_10688301	3300006943	Root Nodules	KSEKIDFKKKILKTLREELNMMSKILQKPFQEHN*
Ga0099822_10703511	3300006943	Root Nodules	MKMKSLKKIRKSEKIDFKKKILKTLREELNMMNKILQKPFQEHN*
Ga0099822_10703512	3300006943	Root Nodules	MKSEKIDFKKKILKTLREELNMMSKILQKTFQEHN*
Ga0099822_10717641	3300006943	Root Nodules	FKKIRKSEKIDFKKKILKTFREEFNMMSKIFQKKFQEHN*
Ga0099822_10731091	3300006943	Root Nodules	MKCEKIDFKKKILKTLREELNMMSKILQKTFQQHN*
Ga0099822_10822891	3300006943	Root Nodules	KSEKIDLKKKILKTLIEELNMMSKILQKPFQEHN*
Ga0099822_10840262	3300006943	Root Nodules	LSKESVKKVIQEVNENEEFKKITKRSENRFQKKILKSLREEFNMMSKILQKPFQEHN*
Ga0099822_10856441	3300006943	Root Nodules	MKMKSSKKFWKSVEIDFKKKILKTLREELNMMSKILQKPFQEHN*
Ga0099822_10924513	3300006943	Root Nodules	VNENEEFKKIMKSEKIDFKKKILKILREELNRMSKILQKPFQEHN*
Ga0099822_10974561	3300006943	Root Nodules	KLKITIQEVNENEEFKKIRKSDKIDFKKKILKTLREELNMMGKILQKPFQEHS*
Ga0099822_11014911	3300006943	Root Nodules	IQVVNENEEFNKIMKSEKIDFKKKILKTLREQLNRMSKIFQKPFQEHN*
Ga0099822_11018073	3300006943	Root Nodules	QELNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQTSFQEHN*
Ga0099822_11024901	3300006943	Root Nodules	MKSEQIDFKKKILKTLREELNRMSKIFQKPFQEHN*
Ga0099822_11039772	3300006943	Root Nodules	LKKIWDSEKIDFKKKILKTLREELNMMSKILQQPFQEHN*
Ga0099822_11051362	3300006943	Root Nodules	VNENEEFQKTRKSDKIDFKKKILKTLREELNIVSKILQKPFQEHN*
Ga0099822_11072001	3300006943	Root Nodules	VNENEEFKKTRKSDKINFKKKILKTLREELNIMSKILQKPFQEHN*
Ga0099822_11095221	3300006943	Root Nodules	EFKKIRKSEKIDFKKNILKTLREELNMMSKMLQKPFQEHN*
Ga0099822_11132522	3300006943	Root Nodules	MCKNVIQEVNESEEFKKSRKSEKIDFKKKILKTLREELNMMSKILQKPFQEIVKDLKM
Ga0099822_11138891	3300006943	Root Nodules	RKSEKIDFKKKILKTFREELNMMSKIFQKQFEEHN*
Ga0099822_11144202	3300006943	Root Nodules	NENEEFKKIRKSVKIDFKKKILKTFRQELNMMSKILQKTFPEHN*
Ga0099822_11151081	3300006943	Root Nodules	IRKSEKIDFKKKILKTLREELNMMSKVLQKPFQKHN*
Ga0099822_11179211	3300006943	Root Nodules	QEVNENEEFKKIMKSEKIDFKKKILKILREELNRMSKILQKPFKEHN*
Ga0099823_10436531	3300006944	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKI
Ga0099823_10614921	3300006944	Root Nodules	KLSKESVKIIIQEVNENEELKKSMKSGKIDFKKKILKTLREELNMMSKILQKTFQEHN*
Ga0099823_10724402	3300006944	Root Nodules	MSKSEKIDFKKKILKTLREEFNMMSKILQKPFQEHH*
Ga0099823_10748921	3300006944	Root Nodules	KSQKIDFKKKILKTLREELNMMSKILQKPFQEHN*
Ga0099823_10752365	3300006944	Root Nodules	SKESVKISNLKVNENGEVKKLKSENIDLNKNILKTLREKPNMMSKILQKSFQEFN*
Ga0099823_11114621	3300006944	Root Nodules	NEHEEFKKIRKSDKIDFKKKILKTLRQELNMMSKILQKPFQ*
Ga0099823_11163901	3300006944	Root Nodules	YVIEEVNENEEFKKIRKSEKIDFKKNILKTLREELNMMSKMLQKPFQEHN*
Ga0099823_11290013	3300006944	Root Nodules	MKMKSLKKLRKSEKIDFKKKILKTLREELNMMSKILQTPFQEHN*
Ga0099823_11400981	3300006944	Root Nodules	KIRKSEKIDFKKKILKTLREELNMMSRILQKPFQEHN*
Ga0099823_11472471	3300006944	Root Nodules	MKMKSLKKIRKTKKIDFKKNILKTLREELNMMSKILQKPVQEHN*
Ga0099823_11494241	3300006944	Root Nodules	MKSEKIDFKKKILKILREELNRMSKILQTPFQEHN*
Ga0214544_100114622	3300021320	Root Nodules	VSKLVIQEVNENEEFKKIRKSEKIDFKKKFLKTLREELNMMSKILQKSF
Ga0214544_100263325	3300021320	Root Nodules	MSKSEKIDFKKKILKTLREEFNMMSKILQKPFQEHH
Ga0214544_100263326	3300021320	Root Nodules	MKMKSLKKIRKSEKIDFKKKILKTLREELNMMSKILQNPFQEHH
Ga0214544_101389711	3300021320	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_101389718	3300021320	Root Nodules	LKKIRKSDKIDFKKKILKTFREELNMMSKILQKPFQEHN
Ga0214544_101705510	3300021320	Root Nodules	MKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10170558	3300021320	Root Nodules	MKSEKIDFTKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10170559	3300021320	Root Nodules	MKSGKIDFKKKILKTLREELNMMSKILQKTFQEHN
Ga0214544_101752714	3300021320	Root Nodules	KIRKSEKIDLKKKILKTFREELHMMSKILQKPFQEHN
Ga0214544_10195421	3300021320	Root Nodules	MKMKSLKKIRKSEKIDFKKKILKNLREELNMMSKILQKSFQEHN
Ga0214544_10212894	3300021320	Root Nodules	KKIRKSEKIDFKKKILKTLSEELNMMSKILQKPFQEHS
Ga0214544_10217681	3300021320	Root Nodules	MKMKSLKKIRKTEKIDFKKNILKTLREELNMMSKILQKPVQEHN
Ga0214544_10217685	3300021320	Root Nodules	MKMKSSKKFWKSVEIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10217687	3300021320	Root Nodules	MKSSKKFWKSDEIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10217688	3300021320	Root Nodules	MKRLKKSGKSKKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10228091	3300021320	Root Nodules	KKIRKSEKIDFKKKILKTLREELNMMSKILQKPFKEHN
Ga0214544_10228094	3300021320	Root Nodules	MKSLKKIRKSEKIDFKKKILKTLRQELDIDMMSKILQKTFQEHN
Ga0214544_10229733	3300021320	Root Nodules	MSKSEKIDFKKMILKTLREELNMMSKILQKPFQEHH
Ga0214544_10239941	3300021320	Root Nodules	MKFEKMDLKKKILKTLREELNSMSRILQKPFQEHN
Ga0214544_10239942	3300021320	Root Nodules	MKSEKIDFKKKILKILREELNRMSKILQKPFKEHN
Ga0214544_10239943	3300021320	Root Nodules	VNENEEFKKIMKSEKIDFKKKILKILREELNRMSKILQKPFQEHN
Ga0214544_10256633	3300021320	Root Nodules	MKSEKIDFKKKILKTLREELNRMSKIFQKPFQEHN
Ga0214544_10256634	3300021320	Root Nodules	MKSEKIDFKKNILKTLREEHNMMSKILQKPFQEHN
Ga0214544_10268641	3300021320	Root Nodules	MKCEKIDFKKKILKTLREELNMMSKILQKTFQQHN
Ga0214544_10268645	3300021320	Root Nodules	VNEHEEFKKIRKSDKIDFKKKILKTLRQELNMMSKILQKPFQEHN
Ga0214544_10278881	3300021320	Root Nodules	MKMKSLKKITKSEKIDFKKKILKTLREELSMMSKILQKQFQEHK
Ga0214544_10288883	3300021320	Root Nodules	MKFEKMDLKKKILKTLREELNMMSKILQQPFQEHN
Ga0214544_10304581	3300021320	Root Nodules	MKSEKIDFKKKILKILREELNRMSKILQTPFQEHN
Ga0214544_10304582	3300021320	Root Nodules	MKMKSLRKIRKSEKIDFKKKILKTLGEELNMMSKILQKTFQEYN
Ga0214544_10304583	3300021320	Root Nodules	MKSEKIDFKKKILKTLREELNMMSKILQKTFQEHN
Ga0214544_10309721	3300021320	Root Nodules	MKSDKIDFKKKILKTLREELKMMSKILQKPFQEHN
Ga0214544_10309723	3300021320	Root Nodules	MKSGKIDFKKKILKTLREELNMMNKILQKPFQEHN
Ga0214544_10311391	3300021320	Root Nodules	MKSEKIDFKKKILKTLREDLNRMTNIFQKPFQEHN
Ga0214544_10312952	3300021320	Root Nodules	MKMKSLKKLRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10312953	3300021320	Root Nodules	MKMKSLKKLRKSEKIDFKKKILKTLREELNMMSKILQTPFQEHN
Ga0214544_10313902	3300021320	Root Nodules	MKSEKIDFKKKILKTLREELNRMSKIFQKPYQEHN
Ga0214544_10332452	3300021320	Root Nodules	VNENEEFKKTRKSDKINFKKKILKTLREELNIMSKILQKPFQEHN
Ga0214544_10335191	3300021320	Root Nodules	MEENEEFKKVWKSEKIDFKKKILKTLKEEFNMMSKIFQKKFQEHN
Ga0214544_10360592	3300021320	Root Nodules	IRKSEKIDFKKKILKTFREELNMMSKIFQKQFEEHN
Ga0214544_10403653	3300021320	Root Nodules	VNENEEFQKTRKSDKIDFKKKILKTLREELNIVSKILQKPFQEHN
Ga0214544_10422292	3300021320	Root Nodules	KIRKSEKIDFKKKILKTLKAELNMMSKILQKPFQEHN
Ga0214544_10424151	3300021320	Root Nodules	VNENEEFQKTRKSDKIDFKKKILKTLREELNMMSRILQKPFQEHN
Ga0214544_10466451	3300021320	Root Nodules	KIRKSDKIDFKKKILKTLREELNMMSRILQKPFQEHN
Ga0214544_10469161	3300021320	Root Nodules	MKMKSLNKIRKSEKIDFKKKILKTLKEELNMMSKILQKPFQEHN
Ga0214544_10469491	3300021320	Root Nodules	MEENEEFKKIWKSEKIDFKKKILKTLKEKLNMMSKIFQKKFQEHN
Ga0214544_10482192	3300021320	Root Nodules	VNEHEEFKKIRKSDKIDFKKKILKTLRQELNMMSKILQKPFQ
Ga0214544_10520542	3300021320	Root Nodules	EEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFLVHN
Ga0214544_10523021	3300021320	Root Nodules	MKSEKIDFKKKILKTLREELNMMSKILRKTFQEDN
Ga0214544_10530032	3300021320	Root Nodules	EFKKIRKSEKIDFKKNILKTLREELNMMSKMLQKPFQEHN
Ga0214544_10538461	3300021320	Root Nodules	MKMKSSKKFWKSDEIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214544_10555221	3300021320	Root Nodules	IQVVNENEEFNKIMKSEKIDFKKKILKTLREQLNRMSKIFQKPFQEHN
Ga0214542_10161561	3300021321	Root Nodules	MKSEKIDFKKNILKTLREELNRMSKILQKPFQEHN
Ga0214542_10161563	3300021321	Root Nodules	MKSEQIDFKKKILKTLREELNRMSKIFQKPFQEHN
Ga0214542_10161564	3300021321	Root Nodules	MKSEKIDFKKKMLKTLREELNMMSKILQKPFQEHN
Ga0214542_101920611	3300021321	Root Nodules	MKMKSLKKIRKSEKIDFKKKILKTLREELNMMSKILQKTFQEHN
Ga0214542_10210341	3300021321	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKIL
Ga0214542_10223761	3300021321	Root Nodules	MKSQKIDLKKKILKTLREELNMMSKILQKNIQEYN
Ga0214542_10232281	3300021321	Root Nodules	QEFNENEEFKKIRKSEKIEFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214542_10253661	3300021321	Root Nodules	EEFKKIRKSEKIDFKKKILKTLREELNMMSKILPKPFQEHN
Ga0214542_10292851	3300021321	Root Nodules	MKSEKIDFMKKILKTLREELNRMSKILQKPFQEHN
Ga0214542_10292854	3300021321	Root Nodules	MKSEKIDFKKKILKTLREDLNRMSKIFQKPFQEHN
Ga0214542_10302071	3300021321	Root Nodules	KIWKSEKIDFKKKILKTLKEELNMMSKIFQKKIQEHN
Ga0214542_10313731	3300021321	Root Nodules	MKSEKIDFKKNILKTLREELNMMSKILQSPFQEHN
Ga0214542_10316235	3300021321	Root Nodules	KLRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214542_10357332	3300021321	Root Nodules	IRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0214542_10374151	3300021321	Root Nodules	MKSEKIDLKKKILKTLREELNMMSKILQTLFQEHN
Ga0214542_10383141	3300021321	Root Nodules	SVKIIIQEVNENEEFKKIRKSDKIDFKKKILKTLREELNMMSRILQKPFQEHN
Ga0214542_10449191	3300021321	Root Nodules	VIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMISKILQKPFQEHN
Ga0214542_10525901	3300021321	Root Nodules	ESVKITIQEVNENEELKKIRKSDKIDFKNKILKSLREELNMMSKILQKPFQENN
Ga0214542_10571192	3300021321	Root Nodules	IRKSEKIDFKKKILKTLREELNMMSKILQKPFLVHN
Ga0214545_10078171	3300021324	Root Nodules	MKSLKKIRKSEKIDFKKKILKTLREELNMMSKILQNPFQEHH
Ga0214545_10205701	3300021324	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLRE
Ga0214545_10227614	3300021324	Root Nodules	QEVNENEEFKKIRKSEKIDFKQRISKTLREELNKMSKILQKPFKEHN
Ga0214545_10325251	3300021324	Root Nodules	KKIRKSEKIDFKKKILKTLREELNMMSKIFQKSFQEHN
Ga0214545_10379952	3300021324	Root Nodules	ENEEFKKIRKSEKIDFKKKISKTLREELNMMSKILQKPFQEHS
Ga0214545_10387662	3300021324	Root Nodules	RKSDKIDFKKKILKTLRQELNMMSKILQKPFQEHN
Ga0214545_10420841	3300021324	Root Nodules	KTRKSDKIDFKKKILKTLREELNIMSKILQKPFQEHN
Ga0214545_10442781	3300021324	Root Nodules	YVIEEVNENEEFKKIRKSEKIYFKKKILKTLREELNMMSKILQKPYQEHN
Ga0214545_10548892	3300021324	Root Nodules	KYVIEEVNENEEFKKIRKSEKIDFKKNILKTLREELNMMSKMLQKPFQEHN
Ga0214545_10630651	3300021324	Root Nodules	MKSEKIDFKKNILKTLREELNMMSKILQKPFQEHN
Ga0214543_100114923	3300021327	Root Nodules	IQEVNENEEFKKIRKSEKIDFKKKILKTLREELNTMSKILQKNISRT
Ga0214543_10134648	3300021327	Root Nodules	EEFKKIRKSEKIDFKKKILKTFREEFNMMSKIFQKKFQEHN
Ga0214543_10233011	3300021327	Root Nodules	VQKSVIQEVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQ
Ga0214543_10323263	3300021327	Root Nodules	MKSEKIDLKKKILKTLREELNRMSKILQKPFQEHN
Ga0214543_10349021	3300021327	Root Nodules	MRKSEKIDFKKKILKILKEELNMMSKIFQKKFQQHN
Ga0214543_10400191	3300021327	Root Nodules	RKLKITIQEVNENEEFKKIRKSDKIDFKKKILKTLREELNMMGKILQKPFQEHS
Ga0214543_10470432	3300021327	Root Nodules	KIRKSEKIDFKKKILKTLREELNMMSKILQKPFQENN
Ga0209389_10076581	3300027296	Root Nodules	EVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKTFQEHN
Ga0209389_10149851	3300027296	Root Nodules	EEFKKIRKSEKIDFKKKNLKTLREELIMKSKILQKQIQEHN
Ga0209389_10455928	3300027296	Root Nodules	NEEYKKIRKSEKIDFKKKISKTLREELNMMSKILQKPFQEHN
Ga0209389_10678291	3300027296	Root Nodules	KIRKSEKIDFKKKILKTLREELNMMSKILQKPFQVHN
Ga0209389_10734081	3300027296	Root Nodules	VIQEENENEEFKKIRKSEKINLKKKILKTLREELNMISKILQKPFQEHN
Ga0209389_10939982	3300027296	Root Nodules	NEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0209389_10971161	3300027296	Root Nodules	NMKSKKIDFKKNNLKTLRLEINMMSKILENSFQEHN
Ga0209389_11038321	3300027296	Root Nodules	KIRKSEKIDFKKKILKTLREELNMMSKILQTPFEEHN
Ga0209389_11047962	3300027296	Root Nodules	MKMKSLKKIRKSEKIDFKKKILKTLREELNMMNKILQKPFQEHN
Ga0209389_11077151	3300027296	Root Nodules	KKFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFQEHN
Ga0209389_11265771	3300027296	Root Nodules	KKIKKSDKIDFKKKILKTLREELNMMGKILQKPFQEHS
Ga0209389_11328142	3300027296	Root Nodules	ITIQEVNENEEFKKIRKSDKIDFKKKILKTLREELNMMSKIL
Ga0209589_10344301	3300027357	Root Nodules	MKMKSFLKVRKSEKIDFKKKILKTLREELYMMSKILQKPFQEYN
Ga0209589_10352671	3300027357	Root Nodules	MKSEKIDFKKRILKSLREELNRMSKILQKPFQEHN
Ga0209589_10352674	3300027357	Root Nodules	RKLSKESVKITIQEVNENEEFKKIRKSIKIDFKKKILKTLREELNMMSKILPKPFQEHN
Ga0209589_10423783	3300027357	Root Nodules	VNENEEFKKIRKSEKIDFKKKILKTLKEELNMISKILQKPFQEHN
Ga0209589_10438331	3300027357	Root Nodules	YEKXKIDFMKKILKTLREELNMMSKILQKPFQEHN
Ga0209589_10519823	3300027357	Root Nodules	KYVIEEVNENEEFKKIRKSEKIDFKKNILKTLREELNMMSKILQKPFQEHN
Ga0209589_10565541	3300027357	Root Nodules	IQEVNENEEFKKIRKSEKIDFKKKILKTLREELNTMSKILQKTFQEHN
Ga0209589_10624402	3300027357	Root Nodules	EVNENEEFKKIRKSEKIDFKKKILKTLREELNMMSKILQKPFLVHN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences