NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F046248

Metagenome Family F046248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046248
Family Type Metagenome
Number of Sequences 151
Average Sequence Length 66 residues
Representative Sequence MKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPASGGAITISVPNAMKPFPAELLPQ
Number of Associated Samples 119
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.22 %
% of genes near scaffold ends (potentially truncated) 36.42 %
% of genes from short scaffolds (< 2000 bps) 89.40 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (62.252 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil
(10.596 % of family members)
Environment Ontology (ENVO) Unclassified
(27.152 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.993 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 43.75%    β-sheet: 0.00%    Coil/Unstructured: 56.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF01381HTH_3 18.54
PF04392ABC_sub_bind 17.88
PF12844HTH_19 4.64
PF00839Cys_rich_FGFR 1.99
PF07045DUF1330 1.99
PF13560HTH_31 1.32
PF00664ABC_membrane 0.66
PF07690MFS_1 0.66
PF00884Sulfatase 0.66
PF03466LysR_substrate 0.66
PF02653BPD_transp_2 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 17.88
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 1.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.25 %
UnclassifiedrootN/A37.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_10279058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria846Open in IMG/M
2162886012|MBSR1b_contig_8717258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria810Open in IMG/M
2162886013|SwBSRL2_contig_13399408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium866Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0422866Not Available549Open in IMG/M
3300000891|JGI10214J12806_11485535Not Available1501Open in IMG/M
3300000953|JGI11615J12901_10339642Not Available700Open in IMG/M
3300002128|JGI24036J26619_10064530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales724Open in IMG/M
3300003911|JGI25405J52794_10032902Not Available1081Open in IMG/M
3300004114|Ga0062593_101011883Not Available853Open in IMG/M
3300004114|Ga0062593_102832576All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300004156|Ga0062589_100162358All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1553Open in IMG/M
3300004156|Ga0062589_100336672All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1189Open in IMG/M
3300004156|Ga0062589_100451664Not Available1065Open in IMG/M
3300004156|Ga0062589_101515909All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300004157|Ga0062590_100242561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1348Open in IMG/M
3300004157|Ga0062590_101167482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium748Open in IMG/M
3300004157|Ga0062590_101232991Not Available732Open in IMG/M
3300004463|Ga0063356_100086491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3339Open in IMG/M
3300004463|Ga0063356_101503478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales997Open in IMG/M
3300004463|Ga0063356_106267264Not Available510Open in IMG/M
3300004480|Ga0062592_101841908Not Available593Open in IMG/M
3300005162|Ga0066814_10001982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1799Open in IMG/M
3300005164|Ga0066815_10030584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria807Open in IMG/M
3300005168|Ga0066809_10082561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales764Open in IMG/M
3300005276|Ga0065717_1005535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria877Open in IMG/M
3300005290|Ga0065712_10090598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2413Open in IMG/M
3300005290|Ga0065712_10093313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2297Open in IMG/M
3300005329|Ga0070683_101549244Not Available637Open in IMG/M
3300005330|Ga0070690_100024376All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3719Open in IMG/M
3300005331|Ga0070670_100075276All Organisms → cellular organisms → Bacteria → Proteobacteria2900Open in IMG/M
3300005332|Ga0066388_101930192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 534211055Open in IMG/M
3300005336|Ga0070680_100412736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1152Open in IMG/M
3300005336|Ga0070680_101014794Not Available717Open in IMG/M
3300005338|Ga0068868_101977067Not Available553Open in IMG/M
3300005340|Ga0070689_100454769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1090Open in IMG/M
3300005343|Ga0070687_100577788Not Available769Open in IMG/M
3300005344|Ga0070661_101661420All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium541Open in IMG/M
3300005366|Ga0070659_100747454Not Available848Open in IMG/M
3300005406|Ga0070703_10572748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium518Open in IMG/M
3300005440|Ga0070705_100325266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1112Open in IMG/M
3300005440|Ga0070705_101282530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium607Open in IMG/M
3300005459|Ga0068867_100157785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium1787Open in IMG/M
3300005536|Ga0070697_100210003Not Available1657Open in IMG/M
3300005543|Ga0070672_100211923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1623Open in IMG/M
3300005545|Ga0070695_100347637Not Available1110Open in IMG/M
3300005549|Ga0070704_101256799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria676Open in IMG/M
3300005578|Ga0068854_100219385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1504Open in IMG/M
3300005618|Ga0068864_102155404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium564Open in IMG/M
3300005713|Ga0066905_102065769Not Available530Open in IMG/M
3300005764|Ga0066903_102304453Not Available1040Open in IMG/M
3300005764|Ga0066903_104035174Not Available787Open in IMG/M
3300005834|Ga0068851_11001718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium527Open in IMG/M
3300006804|Ga0079221_11658745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium519Open in IMG/M
3300006806|Ga0079220_10633593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales768Open in IMG/M
3300006854|Ga0075425_100966831Not Available972Open in IMG/M
3300006871|Ga0075434_102316182Not Available540Open in IMG/M
3300009011|Ga0105251_10257960All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales786Open in IMG/M
3300009148|Ga0105243_10407418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium1265Open in IMG/M
3300009156|Ga0111538_10000744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria44825Open in IMG/M
3300009156|Ga0111538_10831566Not Available1169Open in IMG/M
3300009156|Ga0111538_11548181All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300009162|Ga0075423_12058082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales619Open in IMG/M
3300009174|Ga0105241_10918444Not Available814Open in IMG/M
3300009177|Ga0105248_10398610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1549Open in IMG/M
3300009177|Ga0105248_12469634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium592Open in IMG/M
3300010046|Ga0126384_12160835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium535Open in IMG/M
3300010047|Ga0126382_10259704Not Available1278Open in IMG/M
3300010047|Ga0126382_10726011All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens837Open in IMG/M
3300010358|Ga0126370_12205975Not Available543Open in IMG/M
3300010359|Ga0126376_11404514Not Available723Open in IMG/M
3300010359|Ga0126376_12049867Not Available615Open in IMG/M
3300010359|Ga0126376_13086665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria515Open in IMG/M
3300010360|Ga0126372_11035456All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300010362|Ga0126377_10172593Not Available2050Open in IMG/M
3300010362|Ga0126377_13244858Not Available526Open in IMG/M
3300010371|Ga0134125_11033239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria900Open in IMG/M
3300010373|Ga0134128_12367362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria585Open in IMG/M
3300010375|Ga0105239_11708194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria729Open in IMG/M
3300010397|Ga0134124_12859968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300010403|Ga0134123_10485700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium1158Open in IMG/M
3300010403|Ga0134123_11611040Not Available697Open in IMG/M
3300010403|Ga0134123_12616918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium572Open in IMG/M
3300012495|Ga0157323_1029226Not Available575Open in IMG/M
3300012884|Ga0157300_1016785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium931Open in IMG/M
3300012897|Ga0157285_10274216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium563Open in IMG/M
3300012906|Ga0157295_10428018Not Available501Open in IMG/M
3300012943|Ga0164241_10127022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1828Open in IMG/M
3300013100|Ga0157373_10895901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium658Open in IMG/M
3300013100|Ga0157373_10965327Not Available635Open in IMG/M
3300014325|Ga0163163_10011770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7951Open in IMG/M
3300014968|Ga0157379_11408557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium676Open in IMG/M
3300015201|Ga0173478_10503333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales607Open in IMG/M
3300015261|Ga0182006_1297197Not Available530Open in IMG/M
3300015371|Ga0132258_11333381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1813Open in IMG/M
3300015371|Ga0132258_13187195Not Available1132Open in IMG/M
3300015372|Ga0132256_100206286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2014Open in IMG/M
3300015373|Ga0132257_101584461Not Available837Open in IMG/M
3300015374|Ga0132255_102528332Not Available784Open in IMG/M
3300017792|Ga0163161_11647864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium567Open in IMG/M
3300019356|Ga0173481_10000910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGB126807Open in IMG/M
3300019356|Ga0173481_10075907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium1229Open in IMG/M
3300019361|Ga0173482_10292647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria713Open in IMG/M
3300023073|Ga0247744_1013678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium1108Open in IMG/M
3300023102|Ga0247754_1012091Not Available1808Open in IMG/M
3300023102|Ga0247754_1064124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria863Open in IMG/M
3300025271|Ga0207666_1013222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium1157Open in IMG/M
3300025271|Ga0207666_1063409Not Available592Open in IMG/M
3300025321|Ga0207656_10271398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales835Open in IMG/M
3300025711|Ga0207696_1163999Not Available590Open in IMG/M
3300025899|Ga0207642_10995792Not Available540Open in IMG/M
3300025912|Ga0207707_10466187Not Available1080Open in IMG/M
3300025917|Ga0207660_11320969Not Available585Open in IMG/M
3300025918|Ga0207662_10631361Not Available747Open in IMG/M
3300025930|Ga0207701_10176827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1884Open in IMG/M
3300025930|Ga0207701_11492323Not Available548Open in IMG/M
3300025935|Ga0207709_11683293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300025941|Ga0207711_11742361Not Available566Open in IMG/M
3300025960|Ga0207651_11641285Not Available579Open in IMG/M
3300026078|Ga0207702_11192269Not Available756Open in IMG/M
3300026717|Ga0207526_101611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales681Open in IMG/M
3300026742|Ga0207597_100997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium846Open in IMG/M
3300026746|Ga0207454_103850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300026753|Ga0207528_104207Not Available551Open in IMG/M
3300027252|Ga0209973_1041040All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300027407|Ga0207520_102925Not Available540Open in IMG/M
3300027438|Ga0207564_108086Not Available515Open in IMG/M
3300027560|Ga0207981_1097415Not Available542Open in IMG/M
3300027682|Ga0209971_1061250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria911Open in IMG/M
3300027682|Ga0209971_1081424All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300027695|Ga0209966_1020110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601291Open in IMG/M
3300027717|Ga0209998_10006671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2397Open in IMG/M
3300027775|Ga0209177_10194907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales717Open in IMG/M
3300027821|Ga0209811_10148436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales868Open in IMG/M
3300027876|Ga0209974_10123103Not Available920Open in IMG/M
3300027876|Ga0209974_10160648Not Available815Open in IMG/M
(restricted) 3300031150|Ga0255311_1032004Not Available1096Open in IMG/M
(restricted) 3300031248|Ga0255312_1139517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria601Open in IMG/M
3300031538|Ga0310888_10766243Not Available596Open in IMG/M
3300031547|Ga0310887_10009553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3495Open in IMG/M
3300031547|Ga0310887_10030629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2247Open in IMG/M
3300031716|Ga0310813_10009164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6343Open in IMG/M
3300031716|Ga0310813_11226574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria691Open in IMG/M
3300031740|Ga0307468_100841065Not Available788Open in IMG/M
3300031847|Ga0310907_10009562All Organisms → cellular organisms → Bacteria2959Open in IMG/M
3300031854|Ga0310904_10451540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria852Open in IMG/M
3300031944|Ga0310884_11022862All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300032013|Ga0310906_10180879All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1261Open in IMG/M
3300032075|Ga0310890_10176542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1441Open in IMG/M
3300033004|Ga0335084_10901410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria894Open in IMG/M
3300033475|Ga0310811_10039774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6274Open in IMG/M
3300034820|Ga0373959_0079765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria752Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil10.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.28%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.62%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere6.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.30%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.97%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.97%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.31%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.32%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.32%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.66%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.66%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.66%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300023073Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025711Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026717Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026742Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026746Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300026753Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027252Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027407Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027438Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0392.000068502162886012Miscanthus RhizosphereMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFP
MBSR1b_0353.000022002162886012Miscanthus RhizosphereMREKSAIRRALPILVATVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ
SwBSRL2_0488.000029902162886013Switchgrass RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
ICChiseqgaiiDRAFT_042286623300000033SoilNRPTMKEKSAIRRALPILVAAVLLTAIFVDVVAAGVKAVSGRSRASYPASGGTVTVSVPNAMKSFPAELLPQ*
JGI10214J12806_1148553543300000891SoilRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ*
JGI11615J12901_1033964213300000953SoilRASCPSMKKNFAIRRTLPILVAAALLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKNFPAELLPQ*
JGI24036J26619_1006453023300002128Corn, Switchgrass And Miscanthus RhizosphereMXKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
JGI25405J52794_1003290223300003911Tabebuia Heterophylla RhizosphereMRRALPILVAAVLLTAILVDVVAAGVKAVTRGSRATYPASDGTVTVVVPDAMKSFPAELLPQ*
Ga0062593_10101188313300004114SoilMKEKSAIRRTLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTISVPNAMKGFPAELLPQ*
Ga0062593_10283257623300004114SoilMKKKHAMRRALPILVAAVLLTAIFVDVVAAGVKALSSRSRASYPASGGAITVTVPGTMKAFPSDLLPQ*
Ga0062589_10016235823300004156SoilMKPNHALRRTLPILVVAVLLTATLVDVVAAGVKAMSSRSRASYPVSAGTISVSVPGSMKAFPAELLPQ*
Ga0062589_10033667223300004156SoilMRHTSALRRAFPIIVAAVLLTAIFVDVVAAGVKAVSGRSRASYPASGGTVTVSVPNAMKSFPAELLPQ*
Ga0062589_10045166433300004156SoilMRRALPILVAAVLLTAIFVDVVAAGVKALSSRSRASYPASGGAITVTVPGTMKAFPSDLLPQ*
Ga0062589_10151590923300004156SoilMKHKSALRRALPILVAAVLLTAIFVDVVAAGVKAVSGRNRASYPASGGAVTISVPNAMKSFPAELLPQ*
Ga0062590_10024256123300004157SoilMRHTSALRRAFPILVAAVLLTAIFVDVVAAGVKAVSGRSRASYPASGGTVTVSVPNAMKSFPAELLPQ*
Ga0062590_10116748213300004157SoilVVAVLLTATLVDVVAAGVKAMSSRSRASYPVSAGTISVSVPGSMKAFPAELLPQ*
Ga0062590_10123299123300004157SoilMKKKYAMRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTISVPNAMKGFPAELLPQ*
Ga0063356_10008649173300004463Arabidopsis Thaliana RhizosphereMKKNFAIRRTLPILVAAALLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKNFPAELLPQ*
Ga0063356_10150347823300004463Arabidopsis Thaliana RhizosphereMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ*
Ga0063356_10626726413300004463Arabidopsis Thaliana RhizosphereMKKKFAMRRALPILVAAVLLTAIFIDVVAAGVKALSSRSRSSYPASGGAVTVTVPGTMKAFPSELLPQ*
Ga0062592_10184190813300004480SoilMKQNHALRRALPILVVAVLLTATLVDVVAAGVKAMSSRSMSSRSRVSYPVAGAISVSVPDSMKAFPAELLPQ*
Ga0066814_1000198223300005162SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPVSGGAITISMPNAMKAFPAELLPQ*
Ga0066815_1003058433300005164SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPVSGGAITISVPNAMKAFPAELLPQ*
Ga0066809_1008256123300005168SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ*
Ga0065717_100553533300005276Arabidopsis RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0065712_1009059833300005290Miscanthus RhizosphereMREKSAIRRALPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0065712_1009331333300005290Miscanthus RhizosphereMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0070683_10154924413300005329Corn RhizosphereMKKNFAIRRALPILVAVVLLTAICVDVVAAGVKAVSRGNRAVYPASGSAVTMTAPTTVRNFPAALLPQ*
Ga0070690_10002437623300005330Switchgrass RhizosphereMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0070670_10007527613300005331Switchgrass RhizosphereQRICAIDASHSRMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ*
Ga0066388_10193019213300005332Tropical Forest SoilMRRALPILVAAVLLTAILVDVVAAGVKAVTRGSRATYPASEGTVTVVVPDAMKSFPAELL
Ga0070680_10041273623300005336Corn RhizosphereMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAM
Ga0070680_10101479423300005336Corn RhizosphereMRRALPILVAAVLLTAIFVDVVAAGVKALSSRSRASYPASGGAITVTVPGTMKAFPSELLPQ*
Ga0068868_10197706713300005338Miscanthus RhizosphereMKKNFAIRRALPILVAVVLLTAICVDVVAAGVKAVSRGNRAAYPAAGGAVTMSAPNSVRNFPAALLPQ*
Ga0070689_10045476933300005340Switchgrass RhizosphereMREKSAIRRVLPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0070687_10057778813300005343Switchgrass RhizosphereASRMREKSAIRRALPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0070661_10166142023300005344Corn RhizosphereMAVTARLCDRCQASRMREKSAIRRAPPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0070659_10074745413300005366Corn RhizosphereILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTISVPNAMKGFPAELLPQ*
Ga0070703_1057274823300005406Corn, Switchgrass And Miscanthus RhizosphereMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ*
Ga0070705_10032526623300005440Corn, Switchgrass And Miscanthus RhizosphereMKKKHAMRRALPILVAAVLLTAIFVDVVAAGVKALSSRSRASYPASGGAITVTVPGTMKAFPSELLPQ*
Ga0070705_10128253023300005440Corn, Switchgrass And Miscanthus RhizosphereMKQNYALRRALPILVAAVLLTAIFVDVVAAGVKAISRRSRASYPVPDTAITVSVSNSMKAFPVELLPQ*
Ga0068867_10015778553300005459Miscanthus RhizosphereKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0070697_10021000353300005536Corn, Switchgrass And Miscanthus RhizosphereIDASHSRMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ*
Ga0070672_10021192313300005543Miscanthus RhizosphereMDKKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0070695_10034763713300005545Corn, Switchgrass And Miscanthus RhizosphereMKQNYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTISVPNAMKGFPAELLPQ*
Ga0070704_10125679913300005549Corn, Switchgrass And Miscanthus RhizosphereMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPF
Ga0068854_10021938533300005578Corn RhizosphereMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMK
Ga0068864_10215540423300005618Switchgrass RhizosphereMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ*
Ga0066905_10206576923300005713Tropical Forest SoilMRRALPVLVAAVLLTAIFVDVVAAGVKAVTRGSRAFYPAPDGNVTVSVPNALKSFPAELLPQ*
Ga0066903_10230445313300005764Tropical Forest SoilMRRALPVLVAAVLLTAIFVDVVAAGVKAVSRGSRVSYPVPDTAITVTVPNGMKSFPPELLPQ*
Ga0066903_10403517423300005764Tropical Forest SoilMRKKTSLRRALPLLVAAVLLTAIFVDVVAAGVKAVSRGSRASYPVPDTAITVTVPNGMKSFPAELLPQ*
Ga0068851_1100171823300005834Corn RhizosphereLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPADLLPQ*
Ga0079221_1165874523300006804Agricultural SoilMRRALPIIVAAVLLTAALVDVVAAGVKAVSGRSRASYPAAGGTITVSVPSGMKAFPSELLPQ*
Ga0079220_1063359313300006806Agricultural SoilALPILVAVVLLTAICVDVVAAGVKAVSRGNRAAYPASGGAVTMSAPNSVRNFPAALLPQ*
Ga0075425_10096683143300006854Populus RhizosphereMKQKSALRRALPILVAAVLLTATFVDVVAAGVKAVSRGSRASYPVADPAITIPVPNAMKSFPAELLPR*
Ga0075434_10231618223300006871Populus RhizosphereLRYCGKMKQKSALRRALPILVAAVLLTATFVDVVAAGVKAVSRGSRASYPVADPAITIPVPNAMKSFPAELLPR*
Ga0105251_1025796013300009011Switchgrass RhizosphereSAIRRAPPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0105243_1040741843300009148Miscanthus RhizosphereMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPVSGGAITISVPNAMKPFPAELLPQ*
Ga0111538_10000744663300009156Populus RhizosphereMDKKYSLRRTLPIFVAAVLLTAVFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0111538_1083156633300009156Populus RhizospherePIVVAVVLLTATFVDVVAAGVKAVSRGSRASYPVSDAAITVTAPNAMKAFPAELLPR*
Ga0111538_1154818123300009156Populus RhizosphereMREKFTLRHALPIVVAVVLLTATFVDVVAAGVKAVSRGSRASYPVSDAATTVTAPNAMKAFPAELLPW*
Ga0075423_1205808213300009162Populus RhizosphereMREKFTLRHALPIVVAVVLLTATFVDVVAAGVKAVSRGSRASYPVSDAATTVTAPNAMKAFPA
Ga0105241_1091844413300009174Corn RhizosphereYASGIGDKGGGGRQKRKSVMAVTARLCDRCQASRMREKSAIRRALPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0105248_1039861033300009177Switchgrass RhizosphereMREKSAIRRVLPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNA
Ga0105248_1246963433300009177Switchgrass RhizosphereRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0126384_1216083523300010046Tropical Forest SoilMRRVLPLLVAAVLLTAIFVDVVAAGVKAVSRGSRASYPAPDTNITVSVPSGMKSFPAELLPQ*
Ga0126382_1025970413300010047Tropical Forest SoilMRKFSMRRALPILVAAVLLTAILVDVVAAGVKAVTRGSRATYPASEGTVTVVVPDAMKSFPAELLPQ*
Ga0126382_1072601123300010047Tropical Forest SoilMRKVSMRRALPILVAAVLLTAILVDVVAAGVKAVTRGSRATYPASEGTVTVAVPDAMKSFPAELLPQ*
Ga0126370_1220597523300010358Tropical Forest SoilMKQKSALRRALPILVAAALLTATFVDVVAAGVKAASRGSRVSYPVPDTAITVTVPNGMRSFPPELLPQ
Ga0126376_1140451413300010359Tropical Forest SoilMRKKFSMRRALPILVAAVLLTAILVDVVAAGVKAVTRGSRATYPASEGTVTVAVPDAMKSFPAELLPQ*
Ga0126376_1204986713300010359Tropical Forest SoilMEKKHTIRLIPVLVVAVLLTATLVDVVAAGVKAVSGRSRASYPAPGGSISVSVPDAMKPFPSELLPQ*
Ga0126376_1308666523300010359Tropical Forest SoilMKKNFAIRRALPILVAVVLLTAICVDVVAAGVKAVSRGNRAAYPASGGAVTMTAPNSVRNFPAALLPQ*
Ga0126372_1103545613300010360Tropical Forest SoilMRKKFSLRRALPVLVAAVLLAAIFADVVAAGVKAASRGSRASYPASDGTVTVVVPDAMKSFPAELLPQ*
Ga0126377_1017259343300010362Tropical Forest SoilMRKKRAMRRALPVLVAAVLLTAIFVDVVVAGVKAVSRPGRASYPAPDAAITVTVPDSMKAFPRELLPQ*
Ga0126377_1324485813300010362Tropical Forest SoilMRKKSSMRRALPLLVAAVLLTAIFVDVVAAGVKAVSRGSRASYPAPDTAMTVPVPNGMKSFPPELLPQ*
Ga0134125_1103323923300010371Terrestrial SoilMREKLAIRRVLPILLAAVLLTAALVDVVTAGVKAVSGRSRAFYPAPGGTITVTVPSGMKAFPPELL
Ga0134128_1236736223300010373Terrestrial SoilMDRKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0105239_1170819423300010375Corn RhizosphereMDRKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAM
Ga0134124_1285996813300010397Terrestrial SoilMDRKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAEL
Ga0134123_1048570013300010403Terrestrial SoilALPILVAAVLLTAIFVDVVAAGVKAVSRRSRAFSPMSDTAITVSVPNSMKAFPAELLPQ*
Ga0134123_1161104013300010403Terrestrial SoilMKRNHALRRTLPIFVVAVLLTATLVDVVAAGVKAMSSRSRASYPVSAGTISVSVPGSMKAFPAELLPQ*
Ga0134123_1261691823300010403Terrestrial SoilMKQNYALRRALPILVAAVLLTAIFVDVVAAGVKAISRRSRASYLVPDTAITVSVSNSMKAFPVELLPQ*
Ga0157323_102922633300012495Arabidopsis RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLP
Ga0157300_101678533300012884SoilMDRKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSGRNRASYPASGGAVTISVPNAMKPFPADLLPQ*
Ga0157285_1027421613300012897SoilMKKNYAIRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0157295_1042801813300012906SoilIRANCSKMKKKYAMRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRVFYPASGGAVTISVPNAMKGFPAELLPQ*
Ga0164241_1012702223300012943SoilMKQNHALRRALPILVVAVLLTATLVDVVAAGVKVMSSRSRASYPVSAGAISVSVPGSMKAFPAELLPQ*
Ga0157373_1089590113300013100Corn RhizosphereTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0157373_1096532713300013100Corn RhizosphereMKQTDALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGINVSVPNAMKAFPAELLPQ*
Ga0163163_10011770103300014325Switchgrass RhizosphereMREKSAIRRAPPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ*
Ga0157379_1140855733300014968Switchgrass RhizosphereSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ*
Ga0173478_1050333333300015201SoilMDKKYSLRRTLPIFVVAVLLTATLVDVVAAGVKAMSSRSRASYPVSAGTISVSVPGSM
Ga0182006_129719713300015261RhizosphereILVAVVLLTAICVDVVAAGVKAVSRGNRAAYPASGGAVTMTTPNSVRNFPAALLPQ*
Ga0132258_1133338133300015371Arabidopsis RhizosphereMKKNYAMRRALPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKGFPAELLPQ*
Ga0132258_1318719533300015371Arabidopsis RhizosphereMKKNYAIRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKGFPAELLPQ*
Ga0132256_10020628623300015372Arabidopsis RhizosphereMKKNYAIRRALPILLAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ*
Ga0132257_10158446113300015373Arabidopsis RhizosphereMKEKSAIRRTLPILVAVVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKGFPAELLPQ*
Ga0132255_10252833223300015374Arabidopsis RhizosphereMKEKSAIRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKGFPAELLPQ*
Ga0163161_1164786423300017792Switchgrass RhizosphereRSQRICAIGASHSRMKQNYALRRALPILVAAVLLTAIFVDVVAAGVKAISRRSRASYPVPDTAITVSVPNSMKAFPAELLPQ
Ga0173481_1000091063300019356SoilMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0173481_1007590723300019356SoilMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0173482_1029264713300019361SoilMKRNHALRRTLPIFVVAVLLTATLVDVVAAGVKAMSSRSRASYPVSAGTISVSVPGSMKAFPAELLPQ
Ga0247744_101367813300023073SoilLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0247754_101209113300023102SoilSHSRMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0247754_106412433300023102SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAE
Ga0207666_101322233300025271Corn, Switchgrass And Miscanthus RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ
Ga0207666_106340913300025271Corn, Switchgrass And Miscanthus RhizosphereMKEKSAIRRTLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTISVPNAMKGFPAELLPQ
Ga0207656_1027139823300025321Corn RhizosphereMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKPFPADLLPQ
Ga0207696_116399913300025711Switchgrass RhizosphereVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0207642_1099579223300025899Miscanthus RhizosphereMDKKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMNPFPAELLPQ
Ga0207707_1046618723300025912Corn RhizosphereMKKNFAIRRALPILVAVVLLTAICVDVVAAGVKAVSRGNRAVYPASGSAVTMTAPTTVRNFPAALLPQ
Ga0207660_1132096913300025917Corn RhizosphereAMRRALPILVAAVLLTAIFVDVVAAGVKALSSRSRASYPASGGAITVTVPGTMKAFPSELLPQ
Ga0207662_1063136123300025918Switchgrass RhizosphereIRRALPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ
Ga0207701_1017682723300025930Corn, Switchgrass And Miscanthus RhizosphereMKQNYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTAITVSVPNSMKAFPVELLPQ
Ga0207701_1149232313300025930Corn, Switchgrass And Miscanthus RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMK
Ga0207709_1168329323300025935Miscanthus RhizosphereMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPVSGGAITISVPNAMKAFPAELLPQ
Ga0207711_1174236113300025941Switchgrass RhizosphereMREKSAIRRVLPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ
Ga0207651_1164128513300025960Switchgrass RhizosphereMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPN
Ga0207702_1119226913300026078Corn RhizosphereVMAVTARLCDRCQASRMREKSAIRRAPPILVAAVLLTAIFVDVVAAGVKAVSGKSRASYPAAGGTVTISVPNAMKNFPAELLPQ
Ga0207526_10161123300026717SoilMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0207597_10099723300026742SoilMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAE
Ga0207454_10385023300026746SoilKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0207528_10420723300026753SoilLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ
Ga0209973_104104023300027252Arabidopsis Thaliana RhizosphereMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ
Ga0207520_10292513300027407SoilICAIDASHSRMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0207564_10808613300027438SoilLPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0207981_109741513300027560SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKP
Ga0209971_106125023300027682Arabidopsis Thaliana RhizosphereMKHKSALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAMKAFPAELLPQ
Ga0209971_108142413300027682Arabidopsis Thaliana RhizosphereMKKKHAMRRALPILVAAVLLTAILVDVVAAGVKALSSRSRASYPASGGAVTITVPGTMKVFPSELLPQ
Ga0209966_102011023300027695Arabidopsis Thaliana RhizosphereMRRALPILVAAVLLTAILVDVVAAGVKALSSRSRASYPASGGAVTITVPGTMKVFPSELLPQ
Ga0209998_1000667133300027717Arabidopsis Thaliana RhizosphereMRRALPILVAAVLLTAILVDVVAAGVKALSSRSRASYPASGGAVTITVPGTIKAFPSELLPQ
Ga0209177_1019490723300027775Agricultural SoilMRRALPIIVAAVLLTAALVDVVAAGVKAVSGRSRASYPAAGGTITVSVPSGMKAFPSELLPQ
Ga0209811_1014843633300027821Surface SoilMDKKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0209974_1012310323300027876Arabidopsis Thaliana RhizosphereMKKKHAMRRALPILVAAVLLTAIFVDVVAAGVKVLSSRSRSSYPASGGAVTVTVPGTMKAFPSELLPQ
Ga0209974_1016064823300027876Arabidopsis Thaliana RhizosphereMKKKYAMRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRVFYPASGGAVTISVPNAMKGFPAELLPQ
(restricted) Ga0255311_103200413300031150Sandy SoilMKKKHAMRRALPILVAVVLLTAILVDVVAAGVKALSSRSRSSYPAASGGAVTVTVPGTMKAFPSELLPQ
(restricted) Ga0255312_113951713300031248Sandy SoilMNKKYSLRRALPILVAAVLLTAIFVDVVAAGVKAVSRGGRASYPASGGAVTISVPNAMKAFPAELLPQ
Ga0310888_1076624313300031538SoilSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0310887_1000955333300031547SoilMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKAFPAELLPQ
Ga0310887_1003062943300031547SoilMDKKYSLRRTLPIFVAAVLLTAVFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0310813_1000916453300031716SoilMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAE
Ga0310813_1122657423300031716SoilMKKNFAIRRTLPILVAAALLTAIFVDVVAAGVKAVSRRSRASYPASGGAVTVSVPNAMKNFPAELLPQ
Ga0307468_10084106523300031740Hardwood Forest SoilMRRALPILVAAVLLTAILVDVVAASVKTVTRGSRVSYPAPEAGITVTVPNSMKAFPAELLPQ
Ga0310907_1000956213300031847SoilFSKMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0310904_1045154033300031854SoilMDKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKA
Ga0310884_1102286213300031944SoilMRRALPILVAAVLLTAIFVDVVAAGVKAVSRGSRVFYPASGGAVTISVPNAMKGFPAELLPQ
Ga0310906_1018087923300032013SoilMNKKYSLRRTLPIFVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0310890_1017654223300032075SoilLKMDKKYSMRRVLPILVAAVLLTAIFVDVVAAGVKAVSRGSRASYPASGGAITISVPNAMKPFPAELLPQ
Ga0335084_1090141023300033004SoilMKEKSAIRRALPILVAAVLLTAILVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKGFPAELLPQ
Ga0310811_1003977463300033475SoilMKKNFAIRRTLPILVAAALLTAIFVDVVAAGVKAVSRGSRASYPASGGAVTVSVPNAMKNFPAELLPQ
Ga0373959_0079765_1_1743300034820Rhizosphere SoilMKQKYALRRALPILVAAVLLTAIFVDVVAAGVKAVSRRSRASYPVPDTGITVSVPNAM

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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