Metagenome Family F046264

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F046264
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	52 residues
Representative Sequence	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Number of Associated Samples	70
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	84.11 %
% of genes from short scaffolds (< 2000 bps)	94.70 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.199 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.331 % of family members)
Environment Ontology (ENVO)	Unclassified (75.497 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.199 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 0.00% Coil/Unstructured: 83.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF00106	adh_short	9.27
PF13370	Fer4_13	3.31
PF00270	DEAD	2.65
PF08240	ADH_N	1.99
PF13407	Peripla_BP_4	1.99
PF13561	adh_short_C2	1.32
PF01797	Y1_Tnp	1.32
PF00903	Glyoxalase	1.32
PF00069	Pkinase	1.32
PF07731	Cu-oxidase_2	0.66
PF02627	CMD	0.66
PF00239	Resolvase	0.66
PF00561	Abhydrolase_1	0.66
PF14310	Fn3-like	0.66
PF14534	DUF4440	0.66
PF13683	rve_3	0.66
PF13602	ADH_zinc_N_2	0.66
PF00067	p450	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.30
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.32
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.66
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.66
COG2124	Cytochrome P450	Defense mechanisms [V]	0.66
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.66
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
All Organisms	root	All Organisms	29.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
cellular organisms	root	All Organisms → cellular organisms	29.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.28 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.99 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.99 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	1.99 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.99 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	1.99 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	1.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Nitrosospira lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	1.99 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	1.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Limnohabitans sp. Jir72	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir72	1.99 %
Nitrosospira lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	1.99 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10110382	Not Available	1133	Open in IMG/M
3300005332\|Ga0066388_104342729	Not Available	722	Open in IMG/M
3300005536\|Ga0070697_100433433	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300005764\|Ga0066903_105568197	Not Available	663	Open in IMG/M
3300005764\|Ga0066903_108499741	Not Available	523	Open in IMG/M
3300006797\|Ga0066659_10663876	Not Available	850	Open in IMG/M
3300010046\|Ga0126384_10121364	Not Available	1966	Open in IMG/M
3300010048\|Ga0126373_10221191	Not Available	1847	Open in IMG/M
3300010048\|Ga0126373_13054996	Not Available	522	Open in IMG/M
3300010361\|Ga0126378_11717527	Not Available	713	Open in IMG/M
3300010362\|Ga0126377_10895575	Not Available	950	Open in IMG/M
3300010366\|Ga0126379_10986216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300010366\|Ga0126379_11708751	Not Available	734	Open in IMG/M
3300010376\|Ga0126381_100206413	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300010376\|Ga0126381_102375889	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300010376\|Ga0126381_103351966	Not Available	631	Open in IMG/M
3300010398\|Ga0126383_12795513	Not Available	570	Open in IMG/M
3300012948\|Ga0126375_10432806	Not Available	961	Open in IMG/M
3300012971\|Ga0126369_10056086	Not Available	3390	Open in IMG/M
3300012971\|Ga0126369_12914937	Not Available	560	Open in IMG/M
3300012986\|Ga0164304_11405375	Not Available	573	Open in IMG/M
3300016270\|Ga0182036_10050223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2615	Open in IMG/M
3300016270\|Ga0182036_10489778	Not Available	972	Open in IMG/M
3300016270\|Ga0182036_10892472	Not Available	728	Open in IMG/M
3300016270\|Ga0182036_11335710	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300016270\|Ga0182036_11575530	Not Available	553	Open in IMG/M
3300016270\|Ga0182036_11723032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300016294\|Ga0182041_10804692	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300016294\|Ga0182041_10857927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir72	814	Open in IMG/M
3300016294\|Ga0182041_10935510	Not Available	781	Open in IMG/M
3300016294\|Ga0182041_12318209	Not Available	502	Open in IMG/M
3300016319\|Ga0182033_11083156	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300016319\|Ga0182033_11204723	Not Available	678	Open in IMG/M
3300016319\|Ga0182033_11206898	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300016341\|Ga0182035_10773385	Not Available	841	Open in IMG/M
3300016341\|Ga0182035_10956198	Not Available	758	Open in IMG/M
3300016341\|Ga0182035_10995786	Not Available	743	Open in IMG/M
3300016341\|Ga0182035_11370386	Not Available	634	Open in IMG/M
3300016341\|Ga0182035_11456332	Not Available	616	Open in IMG/M
3300016357\|Ga0182032_10800460	Not Available	796	Open in IMG/M
3300016357\|Ga0182032_11157553	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300016357\|Ga0182032_11339971	Not Available	618	Open in IMG/M
3300016357\|Ga0182032_11852548	Not Available	528	Open in IMG/M
3300016371\|Ga0182034_10163492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir72	1687	Open in IMG/M
3300016387\|Ga0182040_10492678	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300016387\|Ga0182040_11055675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300016387\|Ga0182040_11208748	Not Available	636	Open in IMG/M
3300016387\|Ga0182040_11781494	Not Available	527	Open in IMG/M
3300016404\|Ga0182037_10226935	Not Available	1465	Open in IMG/M
3300016404\|Ga0182037_10430477	Not Available	1093	Open in IMG/M
3300016404\|Ga0182037_10571051	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300016404\|Ga0182037_10636903	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300016404\|Ga0182037_12109350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	507	Open in IMG/M
3300016422\|Ga0182039_11245129	Not Available	673	Open in IMG/M
3300016422\|Ga0182039_11278161	Not Available	664	Open in IMG/M
3300016445\|Ga0182038_11237438	Not Available	666	Open in IMG/M
3300016445\|Ga0182038_11406428	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300016445\|Ga0182038_11808599	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300016445\|Ga0182038_11824093	Not Available	549	Open in IMG/M
3300020581\|Ga0210399_11083797	Not Available	642	Open in IMG/M
3300021372\|Ga0213877_10013724	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300025910\|Ga0207684_11586788	Not Available	530	Open in IMG/M
3300026865\|Ga0207746_1020768	Not Available	545	Open in IMG/M
3300026866\|Ga0207786_110833	Not Available	759	Open in IMG/M
3300026869\|Ga0207821_1005696	Not Available	1359	Open in IMG/M
3300026896\|Ga0207730_1009122	Not Available	863	Open in IMG/M
3300026959\|Ga0207852_1006700	Not Available	1311	Open in IMG/M
3300026979\|Ga0207817_1007666	Not Available	1270	Open in IMG/M
3300027042\|Ga0207766_1027160	Not Available	643	Open in IMG/M
3300027371\|Ga0209418_1011552	Not Available	1392	Open in IMG/M
3300027680\|Ga0207826_1209995	Not Available	523	Open in IMG/M
3300031573\|Ga0310915_10708812	Not Available	710	Open in IMG/M
3300031573\|Ga0310915_10857996	Not Available	637	Open in IMG/M
3300031573\|Ga0310915_11043669	Not Available	569	Open in IMG/M
3300031668\|Ga0318542_10500993	Not Available	631	Open in IMG/M
3300031680\|Ga0318574_10104195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	1576	Open in IMG/M
3300031719\|Ga0306917_10255964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. Jir72	1343	Open in IMG/M
3300031719\|Ga0306917_10855714	Not Available	712	Open in IMG/M
3300031719\|Ga0306917_11491584	Not Available	520	Open in IMG/M
3300031719\|Ga0306917_11536770	Not Available	512	Open in IMG/M
3300031724\|Ga0318500_10649383	Not Available	536	Open in IMG/M
3300031744\|Ga0306918_10032595	Not Available	3311	Open in IMG/M
3300031748\|Ga0318492_10100308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	1422	Open in IMG/M
3300031754\|Ga0307475_10425364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300031754\|Ga0307475_11272446	Not Available	571	Open in IMG/M
3300031777\|Ga0318543_10480538	Not Available	557	Open in IMG/M
3300031779\|Ga0318566_10201780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	987	Open in IMG/M
3300031831\|Ga0318564_10170387	Not Available	971	Open in IMG/M
3300031831\|Ga0318564_10454762	Not Available	558	Open in IMG/M
3300031833\|Ga0310917_10667276	Not Available	705	Open in IMG/M
3300031833\|Ga0310917_10846680	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031833\|Ga0310917_10907988	Not Available	592	Open in IMG/M
3300031859\|Ga0318527_10143307	Not Available	1000	Open in IMG/M
3300031879\|Ga0306919_10238880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira lacus	1363	Open in IMG/M
3300031879\|Ga0306919_10447883	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300031890\|Ga0306925_11050968	Not Available	826	Open in IMG/M
3300031890\|Ga0306925_11898897	Not Available	566	Open in IMG/M
3300031893\|Ga0318536_10687464	Not Available	510	Open in IMG/M
3300031910\|Ga0306923_10265040	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300031910\|Ga0306923_10486553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1396	Open in IMG/M
3300031910\|Ga0306923_10631989	Not Available	1198	Open in IMG/M
3300031910\|Ga0306923_11147696	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300031910\|Ga0306923_11347223	Not Available	754	Open in IMG/M
3300031910\|Ga0306923_12248033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300031910\|Ga0306923_12328356	Not Available	533	Open in IMG/M
3300031912\|Ga0306921_10189652	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300031912\|Ga0306921_10732018	Not Available	1134	Open in IMG/M
3300031912\|Ga0306921_10744310	Not Available	1123	Open in IMG/M
3300031912\|Ga0306921_10793223	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300031912\|Ga0306921_11094861	Not Available	893	Open in IMG/M
3300031912\|Ga0306921_11723738	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300031912\|Ga0306921_12146496	Not Available	590	Open in IMG/M
3300031912\|Ga0306921_12272720	Not Available	569	Open in IMG/M
3300031912\|Ga0306921_12482606	Not Available	538	Open in IMG/M
3300031912\|Ga0306921_12642533	Not Available	517	Open in IMG/M
3300031941\|Ga0310912_10282710	Not Available	1282	Open in IMG/M
3300031941\|Ga0310912_10930528	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031942\|Ga0310916_10237475	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300031942\|Ga0310916_10471365	Not Available	1069	Open in IMG/M
3300031945\|Ga0310913_10128331	Not Available	1737	Open in IMG/M
3300031945\|Ga0310913_10197975	Not Available	1402	Open in IMG/M
3300031945\|Ga0310913_10252324	Not Available	1239	Open in IMG/M
3300031945\|Ga0310913_10411066	Not Available	960	Open in IMG/M
3300031945\|Ga0310913_10593679	Not Available	785	Open in IMG/M
3300031945\|Ga0310913_10857855	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031946\|Ga0310910_10729713	Not Available	782	Open in IMG/M
3300031946\|Ga0310910_10964628	Not Available	667	Open in IMG/M
3300031946\|Ga0310910_10997857	Not Available	654	Open in IMG/M
3300031946\|Ga0310910_11068700	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031947\|Ga0310909_10543692	Not Available	972	Open in IMG/M
3300031947\|Ga0310909_10915637	Not Available	719	Open in IMG/M
3300031947\|Ga0310909_11161690	Not Available	625	Open in IMG/M
3300031947\|Ga0310909_11452543	Not Available	547	Open in IMG/M
3300031954\|Ga0306926_10111596	Not Available	3362	Open in IMG/M
3300031954\|Ga0306926_10306883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1964	Open in IMG/M
3300031954\|Ga0306926_11676337	Not Available	726	Open in IMG/M
3300031954\|Ga0306926_12276082	Not Available	601	Open in IMG/M
3300031954\|Ga0306926_12805973	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032001\|Ga0306922_10422943	Not Available	1425	Open in IMG/M
3300032001\|Ga0306922_11412291	Not Available	699	Open in IMG/M
3300032001\|Ga0306922_11707204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	623	Open in IMG/M
3300032052\|Ga0318506_10359098	Not Available	646	Open in IMG/M
3300032059\|Ga0318533_11100189	Not Available	582	Open in IMG/M
3300032066\|Ga0318514_10506167	Not Available	643	Open in IMG/M
3300032076\|Ga0306924_11182739	Not Available	828	Open in IMG/M
3300032180\|Ga0307471_101900555	Not Available	745	Open in IMG/M
3300032205\|Ga0307472_101788049	Not Available	610	Open in IMG/M
3300032261\|Ga0306920_102616337	Not Available	691	Open in IMG/M
3300032261\|Ga0306920_102800730	Not Available	664	Open in IMG/M
3300032261\|Ga0306920_103864634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300033289\|Ga0310914_10080685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.07%
Loam	Environmental → Terrestrial → Soil → Loam	9.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.28%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101103823	3300001867	Forest Soil	GKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR*
Ga0066388_1043427293	3300005332	Tropical Forest Soil	MTIYLFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALP
Ga0070697_1004334332	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR*
Ga0066903_1055681971	3300005764	Tropical Forest Soil	CPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALLSGISEIRRALPHHALR*
Ga0066903_1084997411	3300005764	Tropical Forest Soil	ISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR*
Ga0066659_106638762	3300006797	Soil	SPSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIDEIRRALPLQALR*
Ga0126384_101213643	3300010046	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR*
Ga0126373_102211911	3300010048	Tropical Forest Soil	IGCPTPMTIYLFGISEVGRNIAEHSERPQAASIAESTALPSGISEIRGALPFHAFR*
Ga0126373_130549961	3300010048	Tropical Forest Soil	MTIYPSGISEAGRNIAEHSERPEAASTAESTALPSGIG
Ga0126378_117175271	3300010361	Tropical Forest Soil	MMIYLSGISEAGKSIAEHSARTQAASIAGSTALPSGIDEI
Ga0126377_108955751	3300010362	Tropical Forest Soil	MTIYLSGTSEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR*
Ga0126379_109862161	3300010366	Tropical Forest Soil	TLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR*
Ga0126379_117087513	3300010366	Tropical Forest Soil	MTIYLSGISEAGRNIAEYSERPEAASTAESTALPSGISEIRRALPLHALR*
Ga0126381_1002064131	3300010376	Tropical Forest Soil	ISEAGRNIAEHSERPEAASTAESTALPSGISGIRRALPLHALR*
Ga0126381_1023758891	3300010376	Tropical Forest Soil	ASPSNSGKNEIRIGCPTLMTIYLSGISEAGKSIVESNERTQPASTAESIALPSGIGEIRRALPLHALR*
Ga0126381_1033519661	3300010376	Tropical Forest Soil	TLRTIYPFDISEAGRNIAEHSERPEGASIAESTALPSGISEIRRALPLHALR*
Ga0126383_127955132	3300010398	Tropical Forest Soil	MMIYPLGISEAGRNIAEHSEGPEAASTAESTALPSGIGKIPRALPLHALR*
Ga0126375_104328062	3300012948	Tropical Forest Soil	MTIYPFGISEAGKSFVESNERTQAASTAESTALPSGIGKIRRALPLQALR*
Ga0126369_100560863	3300012971	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR*
Ga0126369_129149371	3300012971	Tropical Forest Soil	NSGRDEIRTCCPTPMTIYLSDISEAGKSIAEHSERPEAASTAESTALHSGIGKSPEY*
Ga0164304_114053752	3300012986	Soil	MTIYLSGISEAGRNIAEHSERPEAASTAKSTARHSGIGESPEY*
Ga0182036_100502231	3300016270	Soil	EAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQAFR
Ga0182036_104897781	3300016270	Soil	MTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGVGKIRRALTPHALR
Ga0182036_108924722	3300016270	Soil	CPTLMTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGTGKIRRALPLHALR
Ga0182036_113357102	3300016270	Soil	TLMTIYPFGISEAGKSIVESNERTQAALTAKSTALTSGIGKIRRALPLHALR
Ga0182036_115755301	3300016270	Soil	GISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0182036_117230322	3300016270	Soil	GCPTLMTIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISKIRRALPLQALR
Ga0182041_108046922	3300016294	Soil	ASPSNSGKNEIRIGCPTPMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0182041_108579272	3300016294	Soil	ASPSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSEGTPTASTAGSTVLPSGIEIRRALPLHALR
Ga0182041_109355102	3300016294	Soil	SGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0182041_123182092	3300016294	Soil	TLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0182033_110831561	3300016319	Soil	GKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPKAASTAESTALPSGLGEIRRALPLQALR
Ga0182033_112047231	3300016319	Soil	SPSNSGKNEIRIGCPTLMTIYLSGISEVGRNIAERSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0182033_112068982	3300016319	Soil	CPTLMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0182035_107733852	3300016341	Soil	GRNIVEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0182035_109561981	3300016341	Soil	SEAGRNIAEHSERPEAASTAESTALPSGTGKIRRALPLHALR
Ga0182035_109957862	3300016341	Soil	TIYLSGISEAGRNIAEHSERPEAASTAKSTALPSGISEIRRALPLHALR
Ga0182035_113703861	3300016341	Soil	GISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0182035_114563321	3300016341	Soil	SEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALLRI
Ga0182032_108004601	3300016357	Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0182032_111575531	3300016357	Soil	NEIRIGCPTLMTIYLSGISEAGRNIAERSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0182032_113399712	3300016357	Soil	EAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQVLR
Ga0182032_118525483	3300016357	Soil	IRIGCPTLMTIYLSDISEAGRNIAEHSERPEASSTAESTALPFGIGEIRRALLLHALR
Ga0182034_101634923	3300016371	Soil	PTLMTIYLSGISEAGRNIAEHSEGTPTASTAGSTVLPSGIEIRRALPLHALR
Ga0182040_104926782	3300016387	Soil	YLSGISEAGRNIAEYSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0182040_110556751	3300016387	Soil	IYLSSISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRARPSGKYRRG
Ga0182040_112087482	3300016387	Soil	MTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGVGEIRRALTPHALR
Ga0182040_117814941	3300016387	Soil	IYLSGISEAGRNIAEHSERPVAASTAESTALPSGIGEIRRALPLQALR
Ga0182037_102269353	3300016404	Soil	ISEAGRNIAEYSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0182037_104304771	3300016404	Soil	ASPSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAGHSERPEAASTVESTVLPSGIGEIRRALPLHALR
Ga0182037_105710511	3300016404	Soil	GISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0182037_106369031	3300016404	Soil	TLMTIYPFGISEAGRNIAEHSERPQAASTAESTALPSGIGKIRRA
Ga0182037_121093502	3300016404	Soil	IYPFGISEAGRNIAEHSERPEAALTAESTALPSGISKIRRALPLQALR
Ga0182039_112451291	3300016422	Soil	IRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0182039_112781611	3300016422	Soil	IYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0182038_112374382	3300016445	Soil	SGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAKSTALPSGISEIRRALPLHALR
Ga0182038_114064281	3300016445	Soil	NSGKNEIRIGCPTLMTIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISEIRRALPLHALR
Ga0182038_118085992	3300016445	Soil	CPTPMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0182038_118240931	3300016445	Soil	GKNEIRIDCPTLMTIYSFGISEAGRNIAEHSKRPKAASTAKSTALPSGIGKIRRALPFHALR
Ga0210399_110837972	3300020581	Soil	MTIYPFGISEAGKSIAEHSERTQAASIAKFTALPSGIGESPEY
Ga0213877_100137243	3300021372	Bulk Soil	MTIYLSGISETGRNIAEHSERPEAALTAESTALPSGIGEIRRALPLHALR
Ga0207684_115867882	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EIRIGCPTPMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGNGEIRRALPLHALR
Ga0207746_10207682	3300026865	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0207786_1108333	3300026866	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISGIRRALPLQALR
Ga0207821_10056962	3300026869	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0207730_10091223	3300026896	Tropical Forest Soil	MTIYLFGISEAGRNIAGHSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0207852_10067004	3300026959	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0207817_10076662	3300026979	Tropical Forest Soil	MTIYLSGISAAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0207766_10271601	3300027042	Tropical Forest Soil	MTIYLSGISEAGRNIAEHSERPEAASATESTALLSGIGEMRRA
Ga0209418_10115521	3300027371	Forest Soil	MTIYTFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0207826_12099952	3300027680	Tropical Forest Soil	MISLFSINEAGKNIAEHSERTQGASTAESTALPYGIGEAAI
Ga0310915_107088121	3300031573	Soil	MTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGTGKIR
Ga0310915_108579962	3300031573	Soil	SGKNEIRIGCPTLMTIYLSGISEAGKSIAEYGERTQPASTAESTALPSGISKIRRASPLQALR
Ga0310915_110436691	3300031573	Soil	EIRIGCPTLMTIYLSGISEAGSNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0318542_105009932	3300031668	Soil	EIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0318574_101041954	3300031680	Soil	PTNSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0306917_102559644	3300031719	Soil	NEIRIGCPTLMAIYLSGISEAGRNIAEHSEGTPTASTAGSTVLPSGIEIRRALPLHALR
Ga0306917_108557141	3300031719	Soil	TPMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0306917_114915841	3300031719	Soil	MTMYLSGISEAGRNIAQHSERPEAASIAEFTALPSGIGEIRRALALQAFR
Ga0306917_115367701	3300031719	Soil	AASPSNSGKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQPASTAESTALPSGIGEIRRALPLHALR
Ga0318500_106493832	3300031724	Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALRQIPER
Ga0306918_100325954	3300031744	Soil	EAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0318492_101003083	3300031748	Soil	ASNSGKDEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAKSTALPSGISEIRRALPLHALR
Ga0307475_104253643	3300031754	Hardwood Forest Soil	SSYLTASPSNSGKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQAASTAKSTALPSGIGKSPEY
Ga0307475_112724461	3300031754	Hardwood Forest Soil	TIYLSGISEAGKSIAESSERTQPASTAESTALPSGIGKIRRALPLHALR
Ga0318543_104805381	3300031777	Soil	TIYPFGISEAGKNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0318566_102017802	3300031779	Soil	TIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISKIRRALPLQALR
Ga0318564_101703871	3300031831	Soil	TIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0318564_104547622	3300031831	Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPL
Ga0310917_106672762	3300031833	Soil	GCPTLMTIYLFGISEAGKSIVESNERTQPASTAESTALPSGIGEIRRALPLHALR
Ga0310917_108466801	3300031833	Soil	YPFGISEAGRNIAEHSERPEAALTAESTALPSGISEIRRALPLHALR
Ga0310917_109079882	3300031833	Soil	YLFGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0318527_101433071	3300031859	Soil	EIRIDYPTLMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0306919_102388804	3300031879	Soil	SPSNSGKNEIRIGCPTLMTIYPFGISEAGKNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0306919_104478831	3300031879	Soil	IYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0306925_110509682	3300031890	Soil	AASPSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPKAASTAESTALPSGLGEIRRALPLQALR
Ga0306925_118988971	3300031890	Soil	AGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0318536_106874641	3300031893	Soil	NSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAKSTALPSGINEIRRTLPL
Ga0306923_102650403	3300031910	Soil	EAGRNIAEHSERPEAASTAESTALPSGVGEIRRALTPHALR
Ga0306923_104865531	3300031910	Soil	GISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLQALR
Ga0306923_106319892	3300031910	Soil	IRIGCPTLMTIYPFGISEAGKSIVESNERTQAALTAKSTALTSGIGKIRRALPLHALR
Ga0306923_111476961	3300031910	Soil	GISEAGKSIVESNERTQPASTAESTALPSGIGEIRRALPLHALR
Ga0306923_113472231	3300031910	Soil	SPSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAEHSERPKAASTAESTALPSGLGEIRRALPLQALR
Ga0306923_122480332	3300031910	Soil	EIRIGCPTLMTIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISKIRRALPLQALR
Ga0306923_123283561	3300031910	Soil	IAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0306921_101896521	3300031912	Soil	SEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0306921_107320182	3300031912	Soil	LSDISEAGRNIAEHSERPEAASTAESTALPSGVGKIRRALTPHALR
Ga0306921_107443102	3300031912	Soil	SPSNSGKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQAALTAKSTALTSGIGKIRRALPLHALR
Ga0306921_107932231	3300031912	Soil	NIAEHSEKTQAASAAKSTALPSGIGKIRRALPLHAFR
Ga0306921_110948611	3300031912	Soil	PSNSGKNEIRIGCPTLMTIYPFSISEAGKSIVESNERTQPASTAKSTALPSGIGEIRKALPLHALR
Ga0306921_117237381	3300031912	Soil	IYPFGVSEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0306921_121464961	3300031912	Soil	IYLSGISEVGRNIAERSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0306921_122727201	3300031912	Soil	EAGRNIAEHSERPEPASTAESTALPSGISEIRRALPLQALR
Ga0306921_124826061	3300031912	Soil	IRIGCPTLMTIYPFGISEAGRNIAEHSERPEAASTAKSTALPSGIGEIRRALPLHALR
Ga0306921_126425331	3300031912	Soil	EIRIGCPTLMTIYPSGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHALRQIPER
Ga0310912_102827101	3300031941	Soil	MTIYLSGTSEAGRNIAEHSERPEPASTAESTALPSGISEIRRALPLQALR
Ga0310912_109305281	3300031941	Soil	GCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0310916_102374751	3300031942	Soil	EAGRNIAEHSERPEAASTAESTALPSGVGKIRRALTPHALR
Ga0310916_104713651	3300031942	Soil	TIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0310913_101283314	3300031945	Soil	MTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGTGKIRRALPLHALR
Ga0310913_101979752	3300031945	Soil	RIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0310913_102523242	3300031945	Soil	MTIYLSGISEAGRNIAEHSERPKAASTAESTALPSGLGEIRRALPLQALR
Ga0310913_104110661	3300031945	Soil	IYLSGISEAGSNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0310913_105936791	3300031945	Soil	GKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQPASTAESTALPSGISEIRRALPHHALR
Ga0310913_108578551	3300031945	Soil	IGCPTLMTIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISEIRRALPLHALR
Ga0310910_107297132	3300031946	Soil	MTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGVGKIRRALTPH
Ga0310910_109646281	3300031946	Soil	TLMTIYPFGISEAGRNIAERSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0310910_109978571	3300031946	Soil	ISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0310910_110687001	3300031946	Soil	SGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0310909_105436921	3300031947	Soil	PSNSGKNEIRIGCPTLMTIYLSGISEAGRNIAGHSERPEAASTVESTVLPSGIGEIRRALPLHALRKIPERLN
Ga0310909_109156371	3300031947	Soil	GCPTRMTIYLSGISEAGRNIAEHSERPKAASTAESTALPSGLGEIRRALPLQALR
Ga0310909_111616901	3300031947	Soil	RNIAEHSERPEAASTAESTALPSGISEIRRALPLQALR
Ga0310909_114525431	3300031947	Soil	KNEIRIGCPTLMPIYPFGISEAGRNIAEHSERPEAASTAESTALPSGIGEIRRALPLHASGKIPER
Ga0306926_101115964	3300031954	Soil	LMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0306926_103068833	3300031954	Soil	SEAGRNIAEHSERPEAASIAESTALPSGIGEIRRALPLHALR
Ga0306926_116763372	3300031954	Soil	TLMTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGTGKIRRALPLHALR
Ga0306926_122760821	3300031954	Soil	IYLSDISEAGKSIAEHSERPEAASTAESTALPSGIGEIRRALPLHALW
Ga0306926_128059732	3300031954	Soil	GKNEIRIGCPTLMTIYLFGISEAGKSIVESNERTQPASTAESTALPSGIGEIRRALPLHALR
Ga0306922_104229431	3300032001	Soil	IDYPTLMTIYPFGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0306922_114122911	3300032001	Soil	ASPSNSGRNEIRIGCPTLMTIYLSGISEVGRNIAERSERPEAASTAESTALPSGIGEIRRALPLHALR
Ga0306922_117072041	3300032001	Soil	IYLSGISEAGRNIAEHSERPEAASTAESTALPSGTSEIRRALPLHALR
Ga0318506_103590982	3300032052	Soil	MTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHA
Ga0318533_111001891	3300032059	Soil	NEIRIGCPTLMTIYLSDISEAGRNIAEHSERPEAASTAESTALPSGTGKIRRALPLHALR
Ga0318514_105061672	3300032066	Soil	FGISEAGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0306924_111827391	3300032076	Soil	SPSNSGKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQPASTAESTALPSRIGEIRRALPLQH
Ga0307471_1019005551	3300032180	Hardwood Forest Soil	PSNSGENEIRIGCPTLMTIYLSGISEAGRNIAEHSERPEAASTAESTALPSGISEIRRALPLHALR
Ga0307472_1017880492	3300032205	Hardwood Forest Soil	NLTASPSNSGKNEIRIGCPTLMTIYPFGISEAGKSIVESNERTQAASTAKFTALPSGIDKIRRALPHHARR
Ga0306920_1026163372	3300032261	Soil	MTIYLSGISEVGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLQALR
Ga0306920_1028007301	3300032261	Soil	ISESGRNIAEHSERPEAASTAESTALPSGIGKIRRALPLHALR
Ga0306920_1038646341	3300032261	Soil	NEIRIGCPTLMTIYPFGISEAGRNIAEHSERPEAALTAESTALPSGISKIRRALPLQALR
Ga0310914_100806851	3300033289	Soil	NEIRIGCPTLMTIDLSGISEAGRNIAEHSERPEAASIAESTALPSGIGEIRRALPLHALR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences