Metagenome Family F046460

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F046460
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	80 residues
Representative Sequence	MIADIHQILLERLRQQGVNTEEAPALLRDLSKILESHPGIDPAAASSKLQLLGWNGVTLDYQSLQLALAWMEFENKEGGPK
Number of Associated Samples	69
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.67 %
% of genes near scaffold ends (potentially truncated)	25.17 %
% of genes from short scaffolds (< 2000 bps)	86.75 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.702 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (25.166 % of family members)
Environment Ontology (ENVO)	Unclassified (31.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (33.775 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.62% β-sheet: 0.00% Coil/Unstructured: 51.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF02586	SRAP	3.31
PF01022	HTH_5	1.99
PF13435	Cytochrome_C554	1.32
PF00589	Phage_integrase	1.32
PF00216	Bac_DNA_binding	1.32
PF00033	Cytochrome_B	0.66
PF04392	ABC_sub_bind	0.66
PF00571	CBS	0.66
PF13579	Glyco_trans_4_4	0.66
PF01402	RHH_1	0.66
PF16363	GDP_Man_Dehyd	0.66
PF02633	Creatininase	0.66
PF07705	CARDB	0.66
PF02566	OsmC	0.66
PF07238	PilZ	0.66
PF12728	HTH_17	0.66
PF00691	OmpA	0.66
PF13683	rve_3	0.66
PF04336	ACP_PD	0.66
PF02518	HATPase_c	0.66
PF13538	UvrD_C_2	0.66
PF01370	Epimerase	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.31
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.32
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.66
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.66
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.66
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.66
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.66
COG3124	Acyl carrier protein phosphodiesterase	Lipid transport and metabolism [I]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.52 %
Unclassified	root	N/A	5.30 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.66 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	63.58 %
Unclassified	root	N/A	5.30 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.66 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	63.58 %
Unclassified	root	N/A	5.30 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.66 %

Name	Rank	Taxonomy	Distribution
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	33.11 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	12.58 %
Unclassified	root	N/A	5.30 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.99 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	33.11 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12.58 %
Unclassified	root	N/A	5.30 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.99 %
Alkalispirochaeta	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	33.11 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12.58 %
Unclassified	root	N/A	5.30 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.66 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.66 %

Name	Rank	Taxonomy	Distribution
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	33.11 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12.58 %
Unclassified	root	N/A	5.30 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	0.66 %
Desulfosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_104764267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300001213\|JGIcombinedJ13530_107961394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	622	Open in IMG/M
3300001213\|JGIcombinedJ13530_108880076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	610	Open in IMG/M
3300002220\|MLSBCLC_10393277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	745	Open in IMG/M
3300002961\|JGI11641J44799_10091198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	858	Open in IMG/M
3300003432\|JGI20214J51088_10319249	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300003432\|JGI20214J51088_10869994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	588	Open in IMG/M
3300003541\|JGI20214J51650_10473025	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300003541\|JGI20214J51650_10768541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina	674	Open in IMG/M
3300003910\|JGI26437J51864_10007767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2382	Open in IMG/M
3300004051\|Ga0055492_10142690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	566	Open in IMG/M
3300004155\|Ga0066600_10455999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	616	Open in IMG/M
3300005213\|Ga0068998_10184605	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005833\|Ga0074472_11406731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3381	Open in IMG/M
3300006224\|Ga0079037_100036328	All Organisms → cellular organisms → Bacteria → Proteobacteria	3708	Open in IMG/M
3300006224\|Ga0079037_100337354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1410	Open in IMG/M
3300006224\|Ga0079037_101508041	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300006224\|Ga0079037_102049851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	572	Open in IMG/M
3300006930\|Ga0079303_10019099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2179	Open in IMG/M
3300006930\|Ga0079303_10180445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	838	Open in IMG/M
3300006930\|Ga0079303_10279574	Not Available	686	Open in IMG/M
3300006930\|Ga0079303_10360783	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300009009\|Ga0105105_10000685	All Organisms → cellular organisms → Bacteria	15059	Open in IMG/M
3300009009\|Ga0105105_10037624	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300009009\|Ga0105105_10096743	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1419	Open in IMG/M
3300009009\|Ga0105105_10097612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1414	Open in IMG/M
3300009037\|Ga0105093_10080044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1541	Open in IMG/M
3300009037\|Ga0105093_10888138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	523	Open in IMG/M
3300009053\|Ga0105095_10350781	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300009075\|Ga0105090_10037253	All Organisms → cellular organisms → Bacteria → Proteobacteria	3035	Open in IMG/M
3300009075\|Ga0105090_10131682	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300009075\|Ga0105090_10144693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1484	Open in IMG/M
3300009075\|Ga0105090_10519521	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300009081\|Ga0105098_10031617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2079	Open in IMG/M
3300009082\|Ga0105099_10002077	All Organisms → cellular organisms → Bacteria → Proteobacteria	12092	Open in IMG/M
3300009082\|Ga0105099_10183379	Not Available	1192	Open in IMG/M
3300009082\|Ga0105099_10223826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300009085\|Ga0105103_10072842	All Organisms → cellular organisms → Bacteria → Proteobacteria	1757	Open in IMG/M
3300009085\|Ga0105103_10391979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300009085\|Ga0105103_10669052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	595	Open in IMG/M
3300009085\|Ga0105103_10672301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	593	Open in IMG/M
3300009085\|Ga0105103_10882213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	523	Open in IMG/M
3300009091\|Ga0102851_10992405	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300009091\|Ga0102851_11995038	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300009091\|Ga0102851_12249616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	621	Open in IMG/M
3300009091\|Ga0102851_12356730	Not Available	608	Open in IMG/M
3300009091\|Ga0102851_12814609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300009111\|Ga0115026_10633237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	816	Open in IMG/M
3300009111\|Ga0115026_10657666	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	803	Open in IMG/M
3300009131\|Ga0115027_10268291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1130	Open in IMG/M
3300009131\|Ga0115027_10573770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	826	Open in IMG/M
3300009131\|Ga0115027_10759105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	735	Open in IMG/M
3300009131\|Ga0115027_10930542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	675	Open in IMG/M
3300009131\|Ga0115027_10956291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300009131\|Ga0115027_11279847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	591	Open in IMG/M
3300009131\|Ga0115027_11642915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	532	Open in IMG/M
3300009146\|Ga0105091_10710487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	528	Open in IMG/M
3300009153\|Ga0105094_10540380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300009165\|Ga0105102_10010361	All Organisms → cellular organisms → Bacteria	3559	Open in IMG/M
3300009166\|Ga0105100_10107979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1638	Open in IMG/M
3300009167\|Ga0113563_10611598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1209	Open in IMG/M
3300009167\|Ga0113563_11259995	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009167\|Ga0113563_11930037	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009167\|Ga0113563_13192393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300009169\|Ga0105097_10517621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	668	Open in IMG/M
3300009170\|Ga0105096_10528943	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300009179\|Ga0115028_10015990	All Organisms → cellular organisms → Bacteria	3073	Open in IMG/M
3300009179\|Ga0115028_10224471	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300009179\|Ga0115028_10279715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1109	Open in IMG/M
3300009179\|Ga0115028_10319395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1053	Open in IMG/M
3300009179\|Ga0115028_10464179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300009179\|Ga0115028_10550587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	851	Open in IMG/M
3300009179\|Ga0115028_11035660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	662	Open in IMG/M
3300009179\|Ga0115028_12083606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	503	Open in IMG/M
3300009430\|Ga0114938_1228023	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300013315\|Ga0173609_10584831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	858	Open in IMG/M
3300014298\|Ga0075341_1132930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	517	Open in IMG/M
3300018059\|Ga0184615_10168562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1235	Open in IMG/M
3300021090\|Ga0210377_10322651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	939	Open in IMG/M
3300024056\|Ga0124853_1044614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	992	Open in IMG/M
3300024056\|Ga0124853_1088582	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	746	Open in IMG/M
3300025565\|Ga0210110_1034794	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300027683\|Ga0209392_1078964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1058	Open in IMG/M
3300027683\|Ga0209392_1161929	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300027693\|Ga0209704_1126376	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300027715\|Ga0208665_10049147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300027715\|Ga0208665_10119099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	819	Open in IMG/M
3300027723\|Ga0209703_1065142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1414	Open in IMG/M
3300027726\|Ga0209285_10002155	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	5545	Open in IMG/M
3300027726\|Ga0209285_10049653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1240	Open in IMG/M
3300027726\|Ga0209285_10106006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300027726\|Ga0209285_10146909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	730	Open in IMG/M
3300027792\|Ga0209287_10006426	All Organisms → cellular organisms → Bacteria → Proteobacteria	4585	Open in IMG/M
3300027841\|Ga0209262_10028168	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300027841\|Ga0209262_10162115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1074	Open in IMG/M
3300027841\|Ga0209262_10202456	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300027871\|Ga0209397_10480159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	616	Open in IMG/M
3300027877\|Ga0209293_10569840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	597	Open in IMG/M
3300027885\|Ga0209450_10004452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7200	Open in IMG/M
3300027885\|Ga0209450_10142600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1646	Open in IMG/M
3300027885\|Ga0209450_10246503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1277	Open in IMG/M
3300027885\|Ga0209450_10421984	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300027885\|Ga0209450_11153162	Not Available	541	Open in IMG/M
3300027887\|Ga0208980_10071092	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300027890\|Ga0209496_10168148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1017	Open in IMG/M
3300027899\|Ga0209668_10185439	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300027899\|Ga0209668_10974842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	571	Open in IMG/M
3300027900\|Ga0209253_10507259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	899	Open in IMG/M
3300027902\|Ga0209048_10099660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2239	Open in IMG/M
3300027956\|Ga0209820_1124333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	707	Open in IMG/M
3300027972\|Ga0209079_10110222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300033408\|Ga0316605_10269360	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300033408\|Ga0316605_10520387	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300033408\|Ga0316605_11103216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	764	Open in IMG/M
3300033413\|Ga0316603_10669169	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300033414\|Ga0316619_10794711	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300033414\|Ga0316619_10844714	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300033414\|Ga0316619_11737372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	564	Open in IMG/M
3300033418\|Ga0316625_100441634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1001	Open in IMG/M
3300033418\|Ga0316625_101632050	Not Available	617	Open in IMG/M
3300033418\|Ga0316625_102442655	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	527	Open in IMG/M
3300033419\|Ga0316601_100096261	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300033419\|Ga0316601_100928245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
3300033419\|Ga0316601_101993696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	585	Open in IMG/M
3300033419\|Ga0316601_102208261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	554	Open in IMG/M
3300033434\|Ga0316613_11057043	Not Available	559	Open in IMG/M
3300033434\|Ga0316613_11118380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	543	Open in IMG/M
3300033482\|Ga0316627_100176661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1611	Open in IMG/M
3300033482\|Ga0316627_100799889	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300033482\|Ga0316627_101466644	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300033482\|Ga0316627_101489704	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300033482\|Ga0316627_101693468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	647	Open in IMG/M
3300033482\|Ga0316627_102469393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	548	Open in IMG/M
3300033483\|Ga0316629_10156560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1389	Open in IMG/M
3300033483\|Ga0316629_11350576	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300033485\|Ga0316626_10935042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	766	Open in IMG/M
3300033487\|Ga0316630_11702338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300033488\|Ga0316621_10355879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300033488\|Ga0316621_10355941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	983	Open in IMG/M
3300033488\|Ga0316621_10478689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	866	Open in IMG/M
3300033488\|Ga0316621_10943266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	640	Open in IMG/M
3300033488\|Ga0316621_11051785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	609	Open in IMG/M
3300033513\|Ga0316628_102169079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	737	Open in IMG/M
3300033521\|Ga0316616_100721010	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300033521\|Ga0316616_100891092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1096	Open in IMG/M
3300033521\|Ga0316616_104631779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	517	Open in IMG/M
3300033521\|Ga0316616_104718084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	513	Open in IMG/M
3300033557\|Ga0316617_101068164	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300033557\|Ga0316617_101632465	Not Available	654	Open in IMG/M
3300034169\|Ga0370480_0024635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2104	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.68%
Engineered	Engineered	1.32%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	68.21%
Terrestrial	Environmental → Terrestrial	30.46%
Wastewater	Engineered → Wastewater	1.32%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	58.94%
Soil	Environmental → Terrestrial → Soil	26.49%
Marine	Environmental → Aquatic → Marine	7.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.97%
Sediment	Environmental → Aquatic → Sediment	1.32%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.32%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	38.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.60%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.95%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.62%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.97%
Pond	Environmental → Aquatic → Freshwater → Pond	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.66%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.66%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	38.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	26.49%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.62%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.97%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.66%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.66%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	25.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	24.50%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	13.25%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.60%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	6.62%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.97%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.99%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.66%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.66%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.66%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.66%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.66%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.66%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002220	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014298	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025565	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1047642672	3300001213	Wetland	ERLRQHGVNNDEAPAMLRDLSKILESNPGIDAAAASLKLQLLGWNGLMLDYQSFQLAQAWMEFGKKEGDSK*
JGIcombinedJ13530_1079613941	3300001213	Wetland	MPPDIHQLLLDRLQQQGVNNDEAPALLRDLSKILESHPGIDPRLASSKLHMLGWNGVTLDYQSLQLALAWMEMRG*
JGIcombinedJ13530_1088800761	3300001213	Wetland	MPLYHHQLLFDRLYQQGVNAKEAPALLRDLSEFLESDLGIDLATSNSKLQLLGWNGVTLEYQSLHLALWCCMRFCTSLRP*
MLSBCLC_103932772	3300002220	Hydrocarbon Resource Environments	MIPDLHRLLLYRLHHQGVIAGDVPALLRDLSKILESNPGIDATATNSKLDLLGWNGVTLDYQSLQLALAYMESENSGQVMDS*
JGI11641J44799_100911981	3300002961	Wetland	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*IS
JGI20214J51088_103192492	3300003432	Wetland	MQPDLYQLLISRLRQQGVNSDEAPAILRDLSNIIESSPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP*
JGI20214J51088_108699942	3300003432	Wetland	MTTAMTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWIGITLDYQSLQLELAWMEFENQKGGPK*
JGI20214J51650_104730251	3300003541	Wetland	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNTGIDSAAASSKLQLLGWSGVALDYQSLQLALAWIESEKP*
JGI20214J51650_107685411	3300003541	Wetland	YQLLISRLQQQGINSDEAPALLRDLSNIIESTPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP*
JGI26437J51864_100077673	3300003910	Freshwater Lake Sediment	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNEVTLDYQSLQLALAWIEFEKKEGDAK*
Ga0055492_101426901	3300004051	Natural And Restored Wetlands	MPPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPKISAVALIEY
Ga0066600_104559991	3300004155	Freshwater	LKQQGVNTDEAQAFLRDLFKILESNPSIDQSAANSKLQLLGWNGVTLDYQSLQLALAWMESENPGRFRDS*
Ga0068998_101846051	3300005213	Natural And Restored Wetlands	MIADINQILLERLRQQGVNTEEAPALLRDLSKILESNPGIDPAAASSKLQLLGWNGVTLDYQSLQLALAWMEFDNQKGDPK*
Ga0074472_114067315	3300005833	Sediment (Intertidal)	MTTDIHQILLERLHQQGVNTEEAAAYFAIYQKSWNQPNPGIDPAAATSKLQLLGWIGITLDYQSLQLALAWMEFENQKGGPK*
Ga0079037_1000363284	3300006224	Freshwater Wetlands	MIADINQILLERLRQQGVNTEEAPALLRDLSKILESNPGIDPVAASSKLQLLGWNGVTLDYQSLQLALAWMEFENKEGGPK*
Ga0079037_1003373542	3300006224	Freshwater Wetlands	MTPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMESENPG*
Ga0079037_1015080412	3300006224	Freshwater Wetlands	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*
Ga0079037_1020498511	3300006224	Freshwater Wetlands	MTTDIHQILLERLRQHGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFDKKEGDPK*
Ga0079303_100190992	3300006930	Deep Subsurface	MIADIHQILLERLRQQGVNTEEAPALLRDLSKILESHPGIDPAAASSKLQLLGWNGVTLDYQSLQLALAWMEFENKEGGPK*
Ga0079303_101804451	3300006930	Deep Subsurface	MTLDLHRLLLDRLQQQGVSNNEAHALLRDLSKILESNPGIDAGAANSKLNLLGWSGVVLDYQSLQLALALMESKNPGYFQNS*
Ga0079303_102795742	3300006930	Deep Subsurface	MQPDLYQLLISRLRQQGVNTDEAQAFLRDLFKILESNPSIDQSAANSKLQLLGWNGATLDYQSLQLALAWMESENPGRFRDS*
Ga0079303_103607832	3300006930	Deep Subsurface	QQHGVNTHEAPALLRDLSKILESHPGIDPAAASLKLQLLGWIGLTLDYQSFQLAQAWMEFEKREGDPK*
Ga0105105_100006858	3300009009	Freshwater Sediment	MAYSPAMGPDIHQILFERLKHQGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0105105_100376243	3300009009	Freshwater Sediment	MPPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*
Ga0105105_100967433	3300009009	Freshwater Sediment	MTTDIHQILLERLHQQGINTEEAPALLRDLFKILESNPVIDPAAASLKLQLLGWNGLTLDYHSFQLAQAWMEFKKKEGDSK*
Ga0105105_100976122	3300009009	Freshwater Sediment	MGPDIHQLLLDRLQQQGINTEEASALLRDLSKILESSPGIDPASASSKLQLLGWNGVSLDYQSLQLALVWIDLIENQIKGKAFLNTD*
Ga0105093_100800443	3300009037	Freshwater Sediment	MTADIRQILLERLRQHGVNTEETPALLRDLSKILESNPGIDPAAASSKLQLLGWNGVTLDYQAFQLAQAWLEFDKKEGAPK*
Ga0105093_108881382	3300009037	Freshwater Sediment	KINSGILPGYLCSGKVEMEAGRQYYSPAMQPDLYQLLITRLRQQGVNSDAAPALLRDLANILGSSPEIDSAAASSKLQLLGWNGVTLDYQSLQLALAWIESEKP*
Ga0105095_103507812	3300009053	Freshwater Sediment	MEPDIHQLLLDRLRQQEINTEEAPALLRDLSKIQESSPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0105090_100372533	3300009075	Freshwater Sediment	MTPKLHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL*
Ga0105090_101316822	3300009075	Freshwater Sediment	MTSNLDQLLFDRLQQQGVNSDEAPALLRDLSKILESSPGIDLATTNWKLQLLGWNGVTLDYQSLQLALAWMESEKS*
Ga0105090_101446932	3300009075	Freshwater Sediment	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPK*
Ga0105090_105195212	3300009075	Freshwater Sediment	MTTDIHQILLERLHQQGINTEEAPALLRDLFKILESNPVIDPAAASLKLQLLGWNGLTLDYHSFQLAQAWM
Ga0105098_100316172	3300009081	Freshwater Sediment	MTPKLHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDSAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL*
Ga0105099_1000207711	3300009082	Freshwater Sediment	MGPDIHQILFERLKHQGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0105099_101833792	3300009082	Freshwater Sediment	MGPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKADL*
Ga0105099_102238261	3300009082	Freshwater Sediment	MTADIHQLLLDRFQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*
Ga0105103_100728421	3300009085	Freshwater Sediment	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWIGITLDYQSLQLALAWMEFENQKGGLK*
Ga0105103_103919791	3300009085	Freshwater Sediment	RTTQAPGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0105103_106690521	3300009085	Freshwater Sediment	MQRASVGIYSPAMGPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPAAASSRLHMLGWNGVTLDYQSLQLALAWIEFKKKEGDPK*
Ga0105103_106723011	3300009085	Freshwater Sediment	MGPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKK
Ga0105103_108822131	3300009085	Freshwater Sediment	MIADIHRILLERLKQHGVNTEEASALLRDLFKILESNPVIDPAAASLKLQLLGWNGLTLDYHSFQLAQAWMEFKKKEGDSK*
Ga0102851_109924051	3300009091	Freshwater Wetlands	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWNAVTLDYQSLQLALAWMEFENQKGGPK*
Ga0102851_119216921	3300009091	Freshwater Wetlands	VAPPRSPPQQGVETNEAPALLRDLAKIQGSNFGIDAATTNSKLQLLGWNGVTLDYQSLQLALAWMEMQTQ*
Ga0102851_119950381	3300009091	Freshwater Wetlands	MKPTGEYILPAMIADIHQILLERLQQQGVNTEEAPALLRDLSKILESNPGIDPAASSSKLQLLGWNGVTLDYQSLQLALAWMEFENKKGGPK*
Ga0102851_122496162	3300009091	Freshwater Wetlands	MTADIHQILLERLRQQGVNTEEAPALLRDLSKILESNPGIDAAAASLKLQLLGWNGLTLDYQSFQLAQAWLEFEKKEGDPK*
Ga0102851_123567302	3300009091	Freshwater Wetlands	MEPDIHQILFERLKHQGINTEEASALLRDLSKILESSPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELANKKGDLE*
Ga0102851_128146091	3300009091	Freshwater Wetlands	MIADIHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*
Ga0115026_106332371	3300009111	Wetland	MPPDIRQLLFDRLQQQGVNNNEAPALLRDLSKILESNPGIDPGAVSSKLHMLGWNGVTMDYQSMQLALAWMESENPG*
Ga0115026_106576662	3300009111	Wetland	MIADIHQILLERLQQQGVNTEEAPALLRDLSKILESNPGIDPAAASSKLHLLGWNGVTLDYHSLQLALAFMEFENKKGGLK*
Ga0115027_102682911	3300009131	Wetland	MPPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPK*
Ga0115027_105737702	3300009131	Wetland	MQPDLYQLLISRLRQQGVNSDEAPALLRDLANILGSSPEIDSAAASSKLQLLGWNGVALDYQSLQLALAWIESEKP*
Ga0115027_107591051	3300009131	Wetland	MKPTGEYILPAMIADIHKILLERLQQQGFNTEEAPALLRDLSKILESNPGIDPAASTSKLQLLGWNGVTLDYQSLQLALAWMEFENKKGDPKMNF*
Ga0115027_109305421	3300009131	Wetland	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWIGITLDYQSLQLALAWMEFENQKGGPK*
Ga0115027_109562911	3300009131	Wetland	MNTDIHQILLERLQQQGVNAEEVPALLRDLSKILESNIGIDPAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFEKREGDPK*
Ga0115027_112798471	3300009131	Wetland	MAYYSPVMQPDLHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMESENPG*
Ga0115027_116429152	3300009131	Wetland	MIADIHQILLERLRQHGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFDKKEGDPK*
Ga0105091_107104871	3300009146	Freshwater Sediment	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPVAATSKLQLLGWIGITLDYQSLQLALAWMEFENQKGGPK*
Ga0105094_105403801	3300009153	Freshwater Sediment	DPQPLLHQLPLDRLQQQGVNAKEAPTLLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0105102_100103616	3300009165	Freshwater Sediment	MTPKLHQLLLDRFRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL*
Ga0105100_101079792	3300009166	Freshwater Sediment	MAYYSPAMGPDIHQILFERLKHQGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP*
Ga0113563_106115982	3300009167	Freshwater Wetlands	MSPDIRQLLFDRLQQQGVNNDEAPALLRDLSKILESNPGIDPVAASLKLHMLGWNGVSLDYQSMQLAQAWLESENPG*
Ga0113563_112599952	3300009167	Freshwater Wetlands	MQPDLYQLLISRLRQQGVNNDVAPALLRDLSNIIESTPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP*
Ga0113563_119300372	3300009167	Freshwater Wetlands	MEPTGEYILPAMIADIHKILLERLQQQGFNTEEAPALLRDLSKILESNPGIDPAASTSKLQLLGWNGVTLDYQSLQLALAWMEFENKKGDPKMNF*
Ga0113563_131923932	3300009167	Freshwater Wetlands	MNTDIHQILLERLQQQGVNAEEVPALLRDLSKILESNIGIDPAAASLKLQLLGWNGLTLDYQSFQLAQAW
Ga0105097_105176212	3300009169	Freshwater Sediment	MLPNLHQLLLDNRLQQQGVNTDETPALLRDLSKVMKSGVGIDMATANSKLILLGWNSVALDYQSLQLAIA*
Ga0105096_105289432	3300009170	Freshwater Sediment	MGPDIHQLLLDRLQQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWME
Ga0115028_100159901	3300009179	Wetland	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPVIDPAAASLKLQLLGWNGLTLDYHSFQLAQAWMEFKKKEGDSK*
Ga0115028_102244712	3300009179	Wetland	MIPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK*
Ga0115028_102797152	3300009179	Wetland	MTPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMES*
Ga0115028_103193952	3300009179	Wetland	MEAGRQYYSPAMQPDLYQLLITRLRQQGVNSDEAPALLRDLANILGSSPEIDSAAASSKLQLLGWNGVALDYQSLQLALAWIESEKP*
Ga0115028_104641792	3300009179	Wetland	MNTDIHQILLERLQQQGVNAEEVPALLRDLSKILESNIGIDPAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFEKREGDAK*
Ga0115028_105505871	3300009179	Wetland	MIADIHQILLERLRQQGVNTEEAPALLRDLSKILESNPGIDPAASTSKLQLLGWNGVTLDYQSLQLALAWMEFENQMGGPK*
Ga0115028_110356601	3300009179	Wetland	MTLDLHRLLLDRLQQQGVNNNEAHALLRDLSKILESNPGIDAAAANSKLNLLGWSGVVLDYQSLQLALALMESENPGYFQNS*
Ga0115028_120836062	3300009179	Wetland	MTTDIHQILLERLRQHGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFNKKEGDLK*
Ga0114938_12280231	3300009430	Groundwater	MTADIHQILLERLRQYGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLMLDYQSFQLAQAW
Ga0173609_105848311	3300013315	Sediment	LESFSHTDSHTGGRFSDLGINTEEASALLRDLSKILESSPGIDPATASSKLQLLGWNGLTLDYQSFQLALAWMEFGNKKGDLE*
Ga0075341_11329301	3300014298	Natural And Restored Wetlands	MTPNLHQLLLDRLQQQGINTEEASALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDLV*
Ga0184615_101685622	3300018059	Groundwater Sediment	MMPDLHRLLLHRLQQQGVNAGEVPALLRVLSKILESNPGIDTAAINSKLHLLGWNGVTLDYQSLQLALAWMESENEG
Ga0210377_103226513	3300021090	Groundwater Sediment	MMPDLHRLLLHRLQQQGVNAGEVPALLRVLSKILESNPGIDTAAINSKLHLLGWNGVTLDYQSLQLALAWVESENEG
Ga0124853_10446141	3300024056	Freshwater Wetlands	MTPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMESENPG
Ga0124853_10885821	3300024056	Freshwater Wetlands	MIADINQILLERLRQQGVNTEEAPALLRDLSKILESNPGIDPVAASSKLQLLGWNGVTLDYQSLQLALAWMEFENKEGGPK
Ga0210110_10347942	3300025565	Natural And Restored Wetlands	DLHYLLLHRLQQQRVNANEALALLRDLFKLLDLNPGIDAATANSKFHLLGWNGVALDYHLQLTLAWMELENTGQFRNS
Ga0209392_10789642	3300027683	Freshwater Sediment	MTPKLHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL
Ga0209392_11619291	3300027683	Freshwater Sediment	MPPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK
Ga0209704_11263762	3300027693	Freshwater Sediment	MTTDIHQILLERLHQQGINTEEAPALLRDLFKILESNPVIDPAAASLKLQLLGWNGLTLDYHSFQLAQAWMEFKKKEGDSK
Ga0208665_100491472	3300027715	Deep Subsurface	MTPDLHQLLLDRLQQQGVNNDEARALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK
Ga0208665_101190992	3300027715	Deep Subsurface	MQPDLYQLLISRLRQQGVNTDEAQAFLRDLFKILESNPSIDQSAANSKLQLLGWNGATLDYQSLQLALAWMESENPGRFRDS
Ga0209703_10651424	3300027723	Freshwater Sediment	TTQAPGINTEEASALLRDLSKILESSPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP
Ga0209285_100021556	3300027726	Freshwater Sediment	MGPDIHQILFERLKHQGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP
Ga0209285_100496531	3300027726	Freshwater Sediment	PDLYQLLITRLRQQGVNSDAAPALLRDLANILGSSPEIDSAAASSKLQLLGWNGVTLDYQSLQLALAWIESEKP
Ga0209285_101060063	3300027726	Freshwater Sediment	TTDLHQLLLDRLQQQGINTEEASGLLRDLSKILESSPGIDPAAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK
Ga0209285_101469091	3300027726	Freshwater Sediment	MIPDIRQLILDRHRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL
Ga0209287_100064264	3300027792	Freshwater Sediment	MAYSPAMGPDIHQILFERLKHQGINTEEASALLRDLSKILESNPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP
Ga0209262_100281685	3300027841	Freshwater	LLKQQGVNTDEAQAFLRDLFKILESNPSIDQSAANSKLQLLGWNGVTLDYQSLQLALAWMESENPGRFRDS
Ga0209262_101621152	3300027841	Freshwater	MTPDLHQLLLDRLQQQGVNSNEAPALLRGLSKVLESHPGINTTAINSKLHLLGWNGVTLDYQSLQLALAWMEQKV
Ga0209262_102024562	3300027841	Freshwater	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLTLDYHSFQLAQAWMEFKKKEGDPK
Ga0209397_104801592	3300027871	Wetland	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWIGITLDYQSLQLALAWMEFENQKGGPK
Ga0209293_105698401	3300027877	Wetland	MIADIHQILLERLQQQGVNTEEAPALLRDLSKILESNPGIDPAAASSKLHLLGWNGVTLDYHSLQLALAFMEFENKKGGLK
Ga0209450_100044524	3300027885	Freshwater Lake Sediment	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNEVTLDYQSLQLALAWIEFEKKEGDAK
Ga0209450_101426002	3300027885	Freshwater Lake Sediment	MAYYSPAMGPDIHQILLERLQQQGINTEEASALLRDLSKILESSPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGDLE
Ga0209450_102465032	3300027885	Freshwater Lake Sediment	MTADIHQILLERLRQHGVNNDEAPAVLRDLSKILESNPGIDAATASLKLQLLGWNGLTMDYQSFQLAQAWMEFDKKEGYPK
Ga0209450_104219841	3300027885	Freshwater Lake Sediment	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWNAVTLDYQSLQLALAWMEFENQKGGPK
Ga0209450_111531621	3300027885	Freshwater Lake Sediment	MTPNLHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGINPAAASSKLQLLGWNGVSLDYQSFQLALAWMKLGNKKGDLE
Ga0208980_100710923	3300027887	Wetland	MQPDLYQLLISRLRQQGVNNDEAPALLRDLSNIIESTPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP
Ga0209496_101681482	3300027890	Wetland	MNTDIHQILLERLQQQGVNAEEVPALLRDLSKILESNIGIDPAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFEKREGDAK
Ga0209668_101854392	3300027899	Freshwater Lake Sediment	MQPDPYQLLISRLRQQGVNNDEAPALLRDHSNIIESTPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP
Ga0209668_109748421	3300027899	Freshwater Lake Sediment	QGVNANEAPALLRDLSKILESNPGIGSAGINSKLHLLGWNGVTLDYQSLQLALAWMESENPSCFVRFFLYYARRSL
Ga0209253_105072591	3300027900	Freshwater Lake Sediment	MQPDLYQLLISRLRQQGVNTDEAQAFLRDLFKILESNPSIDQSAANSKLQLLGWNGVTLEYQSLQLALAWMESENPGRFRSW
Ga0209048_100996602	3300027902	Freshwater Lake Sediment	MTPDLHRLLLYRLQQQGVNSNEAPALLRGLSKVLESHPGIDTTAINSKLHLLGWNGVTLDYQSLQLALAWMEQKV
Ga0209820_11243332	3300027956	Freshwater Sediment	MTPDLHQLLLDRLQQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMELGNKKGDL
Ga0209079_101102221	3300027972	Freshwater Sediment	MGPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVSLDYQSFQLALAWMELSNKKGRPGINP
Ga0316605_102693602	3300033408	Soil	MQPDLYQLLISRLRQQGVNSDEAPAILRDLSNIIESSPGMDSAGISSKLQLLGWNVVALDYQSLQLALAWIESEKP
Ga0316605_105203871	3300033408	Soil	MIPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAW
Ga0316605_111032162	3300033408	Soil	MTLDLHRLLLDRLQQQGVSNNEAHALLRDLSKILESNPGIDAGAANSKLNLLGWSGVVLDYQSLQLALALMESKNPGYFQSS
Ga0316603_106691692	3300033413	Soil	MQPDLYQLLISRLRQQGVNSDEAPAILRDLSNIIESSPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP
Ga0316619_107947111	3300033414	Soil	MTTDIHQILLERLRQHGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLTLDYQSFQ
Ga0316619_108447142	3300033414	Soil	MTTDIHQILLERLHQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWNAVTLDYQSLQLALTWMEFENQKGGPK
Ga0316619_117373721	3300033414	Soil	MTLDLHRLLLDRLQQQGVSNNEAHALLRDLSKILESNPGIDAGAANSKLNLLGWSGVVLDYQSLQLALALMESKNPGYF
Ga0316625_1004416342	3300033418	Soil	MPSDIHQLLLDRLKQQGVNNDEAPALLRDLSKILESHPGIDPRLASSKLHMLGWNGVTLDYQSMQLALAWMEMRG
Ga0316625_1016320501	3300033418	Soil	MPPDIRQLLFDRLQQQGVNNDEAPALLRDLSKILESNPGIDPVAASLKLHMLGWNGVSLDYQVMQLAQAWLEFENSG
Ga0316625_1024426552	3300033418	Soil	MYNRHNLKSALMTPNLHQLHFDRLQQQGVITEEARALLRDLLKILESNTGIDLATINSKLHLLGWNGVTLDYQSLQLALAWMEIEKSGQLSNS
Ga0316601_1000962614	3300033419	Soil	MTLDLHRLLLDRLQQQGVSNNEAHALLRDLSKILESNPGIDAGAANSKLNLLGWSGVVLDYQSLQLALALMESKNPGYLQNS
Ga0316601_1009282452	3300033419	Soil	HQQGVNTEEAAALLRDLSKILEPNPGIDPAAATSKLQLLGWNAVTLDYQSLQLALTWMEFENQKGGPK
Ga0316601_1019936962	3300033419	Soil	YLPAMIADIHQILLERLQQQGVNTEEAPALLRDLSKILESNPGIDPAASTSKLQLLGWNGVTLDYQSLQLALAWMELENKKGGPK
Ga0316601_1022082611	3300033419	Soil	MQPDLYQLLISRLRQQGVNSDEAPAILRDLSNIIESSPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESKRP
Ga0316613_110570431	3300033434	Soil	AMTTDIHQILLERLRQHGVNNDEAPAVLRDLSKIVESNPGIDAAAASLKLQLLGWNGLMLDYQSFQLAQAWMEFDKKEGDPK
Ga0316613_111183802	3300033434	Soil	AIYLPAMNTDIHQILLERLQQQGVNAEEVPALLRDLSKILESNIGIDPAAASLKLQLLGWNGLTLDYQSFQLAQAWMEFEKREGDPK
Ga0316627_1001766611	3300033482	Soil	MTTDIHQILLERLHQQGVNTEEATALLRDLSKILEPNPGIDPAAATSKLQLLGWNAVTLDYQSLQLALAWMEFENQKGGPK
Ga0316627_1007998892	3300033482	Soil	MIADIHQILLERLRQQGVNTEEAPALLRDLSKILESHPGIDPAAASLKLQLLGWNGVTLDYQSLQLALAWMEFENQNGGPK
Ga0316627_1014666442	3300033482	Soil	MIPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPK
Ga0316627_1014897042	3300033482	Soil	MTTDIHQILLERLRQHGVNTEEAPALLRDLSKILESNPGIDAAAASLKLQLLGWNGLVLDYQSLQLAQAWMEFGKKEGAPK
Ga0316627_1016934682	3300033482	Soil	MQPDLYQLLISRLQQQGINSDEAPALLRDLSNIIESTPGMDSAGLSSKLQLLGWNGVALDYQSLQL
Ga0316627_1024693931	3300033482	Soil	ADIHKILLERLQQQGFNTEEAPALLRDLSKILESNPGIDPAAASSKLQLLGWNGVTLDYQSLQLALAWMEFENKKGDPKMNF
Ga0316629_101565603	3300033483	Soil	MTPDIHQLLLDRLRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSLQLALAWMES
Ga0316629_113505761	3300033483	Soil	MPPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPK
Ga0316626_109350422	3300033485	Soil	LRQQGINTEEAPALLRDLSKILESSPGIDPAAASSKLQLLGWNGVTLDYQSFQLALAWMESENPG
Ga0316630_117023381	3300033487	Soil	MTPDLHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWMEFKKKEGDPK
Ga0316621_103558791	3300033488	Soil	RKLYSFAMPPDIRQLLFDRLQQQGVNNDEAPALLRDLSKILESNPGIDPVAASLKLHMLGWNGVSLDYQSIQLAQAWLEFENSG
Ga0316621_103559411	3300033488	Soil	MQPDLYQLLISRLQQQGINSDEAPALLRDLSNIIESSPGMDSAGISSKLQLLGWNGVALDYQSLQLALAWIESEKP
Ga0316621_104786892	3300033488	Soil	MPPNLHQLLLDRLQQQGVITEEAPALLRDLSKILDSNPGIDLATTNSKLQLLGWNGVTLDYQSLQLALAW
Ga0316621_109432661	3300033488	Soil	MQPDLYQLLITRLRQQGVNSDEAPALLRDLANILGSSPEIDSAAASSKLQLLGWNGVALDYQSLQLALAWIESEKP
Ga0316621_110517851	3300033488	Soil	HQILLERLRQQGVNTEEAPALLRDLSKILESHPGIDPAAASSKLQLLGWNGVTLDYRSLQLALAWMEFENQMGGPK
Ga0316628_1021690792	3300033513	Soil	MNPYLHQLLFDRLQQQGVNNDEAPALLRDLSKILESNPGIDPGAASSRLQMLGWNGLKLDYHSFQLAQAWM
Ga0316616_1007210102	3300033521	Soil	MTLDLHRLLLDRLQQQGVNNNEAHALLRDLSKILESNPGIDAGAANSKLNLLGWSGVVLDYQSLQLALALMESINPGYFQNS
Ga0316616_1008910922	3300033521	Soil	MSPDIRQLLFDRLQQQGVNNDEAPALLRDLSKILESNPGIDPVAASLKLHMLGWNGVSLDYQSMQLAQAWLEFENSG
Ga0316616_1046317791	3300033521	Soil	MQPDLYQLLISRLRKQGVNSDEAPALLRDLANILGSRPGIDLAAASSKLQLMGWSGVALDYQSLQLALAWIESEKP
Ga0316616_1047180841	3300033521	Soil	ADIHKILLERLQQQGFNTEEAPALLRDLSKILESNPGIDPAAASSKLHMLGWNGVTLDYQSLQLALAWMEFENKKGDPKMNF
Ga0316617_1010681641	3300033557	Soil	MIADIHQILLERLKQQGVNTEEAPALLRDLSKILESNPGIDPAASTSKLQLLGWNGVTLDYQSLQLALAWMEFENKKGDAK
Ga0316617_1016324652	3300033557	Soil	MQPDLYQLLISRLRQQGVNSDEAPALLRDLANILGSSPEIDSAAASSKLQLLGWSGVALDYQSLQLALAWIESEKP
Ga0370480_0024635_1246_1491	3300034169	Untreated Peat Soil	MIADIHQLLLDRLQQQGVNNDEAPALLRDLSKILESNPGIDPAAASSRLHMLGWNGVTLDYQSLQLALAWIEFKKKEGDPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences