Metagenome / Metatranscriptome Family F046539

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046539
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	60 residues
Representative Sequence	MLTYDDLVELARLCARNSRIATSRDVADELWQMAKEYQAQAAKLGTFPEIGDEPMTWNPAR
Number of Associated Samples	102
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.94 %
% of genes near scaffold ends (potentially truncated)	37.09 %
% of genes from short scaffolds (< 2000 bps)	84.11 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.212 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.424 % of family members)
Environment Ontology (ENVO)	Unclassified (31.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.901 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.70% β-sheet: 0.00% Coil/Unstructured: 57.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
a.102.1.2: Cellulases catalytic domain	d1ia6a_	1ia6	0.80324
a.118.8.1: Tetratricopeptide repeat (TPR)	d1zu2a1	1zu2	0.79967
a.118.8.0: automated matches	d5mjza_	5mjz	0.79779
f.72.1.1: Double antiporter-like subunits from respiratory complex I	d3rkoc_	3rko	0.79593
a.7.12.1: PhoU-like	d1vcta1	1vct	0.79449

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF12680	SnoaL_2	1.99
PF07536	HWE_HK	1.99
PF05598	DUF772	1.32
PF09361	Phasin_2	1.32
PF00536	SAM_1	1.32
PF00561	Abhydrolase_1	1.32
PF14520	HHH_5	0.66
PF14252	DUF4347	0.66
PF08401	ArdcN	0.66
PF00989	PAS	0.66
PF11064	DUF2865	0.66
PF08546	ApbA_C	0.66
PF03167	UDG	0.66
PF13501	SoxY	0.66
PF00211	Guanylate_cyc	0.66
PF01355	HIPIP	0.66
PF06568	DUF1127	0.66
PF06041	DUF924	0.66
PF00239	Resolvase	0.66
PF00762	Ferrochelatase	0.66
PF01381	HTH_3	0.66
PF13546	DDE_5	0.66
PF13683	rve_3	0.66
PF00487	FA_desaturase	0.66
PF07690	MFS_1	0.66
PF10009	DUF2252	0.66
PF01527	HTH_Tnp_1	0.66
PF12244	DUF3606	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.99
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	1.99
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	0.66
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.66
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.66
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.66
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.66
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.66
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.66
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.66
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.66
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.66
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.66
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.66
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
All Organisms	root	All Organisms	31.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
cellular organisms	root	All Organisms → cellular organisms	31.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.66 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.66 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.66 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.66 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.66 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.66 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.66 %
Enterobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter	0.66 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.66 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.66 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Brevundimonas basaltis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas basaltis	0.66 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.66 %
Enterobacter bugandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter bugandensis	0.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.66 %
unclassified Methylovirgula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula	0.66 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.32 %
Sphingomonas sp. NFR15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NFR15	0.66 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.66 %
Methylovirgula sp. 4M-Z18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. 4M-Z18	0.66 %
Brevundimonas basaltis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas basaltis	0.66 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.66 %
Enterobacter bugandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter bugandensis	0.66 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402GWOBP	Not Available	511	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104747740	Not Available	527	Open in IMG/M
3300003505\|JGIcombinedJ51221_10002103	Not Available	5350	Open in IMG/M
3300003505\|JGIcombinedJ51221_10017116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2489	Open in IMG/M
3300003505\|JGIcombinedJ51221_10129695	Not Available	1014	Open in IMG/M
3300003505\|JGIcombinedJ51221_10131544	Not Available	1006	Open in IMG/M
3300003505\|JGIcombinedJ51221_10448603	Not Available	522	Open in IMG/M
3300004091\|Ga0062387_100839507	Not Available	689	Open in IMG/M
3300004092\|Ga0062389_101568781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	841	Open in IMG/M
3300004092\|Ga0062389_102465219	Not Available	689	Open in IMG/M
3300004157\|Ga0062590_101370639	Not Available	701	Open in IMG/M
3300005093\|Ga0062594_103240924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300005163\|Ga0066823_10086067	Not Available	625	Open in IMG/M
3300005335\|Ga0070666_10384759	Not Available	1007	Open in IMG/M
3300005347\|Ga0070668_100313295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	1319	Open in IMG/M
3300005354\|Ga0070675_100189415	Not Available	1782	Open in IMG/M
3300005354\|Ga0070675_100191831	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300005354\|Ga0070675_101752056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300005364\|Ga0070673_100010246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6336	Open in IMG/M
3300005434\|Ga0070709_10349774	Not Available	1092	Open in IMG/M
3300005435\|Ga0070714_100322109	Not Available	1446	Open in IMG/M
3300005435\|Ga0070714_100404875	Not Available	1290	Open in IMG/M
3300005436\|Ga0070713_101975677	Not Available	566	Open in IMG/M
3300005535\|Ga0070684_101781034	Not Available	581	Open in IMG/M
3300005614\|Ga0068856_102572439	Not Available	515	Open in IMG/M
3300005764\|Ga0066903_102362130	Not Available	1028	Open in IMG/M
3300005764\|Ga0066903_103918306	Not Available	799	Open in IMG/M
3300006028\|Ga0070717_10128963	Not Available	2173	Open in IMG/M
3300006028\|Ga0070717_10217767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter bugandensis	1677	Open in IMG/M
3300006041\|Ga0075023_100244903	Not Available	714	Open in IMG/M
3300006046\|Ga0066652_100656892	Not Available	995	Open in IMG/M
3300006050\|Ga0075028_100520475	Not Available	697	Open in IMG/M
3300006057\|Ga0075026_100620348	Not Available	638	Open in IMG/M
3300006057\|Ga0075026_100792986	Not Available	574	Open in IMG/M
3300006057\|Ga0075026_101039585	Not Available	512	Open in IMG/M
3300006086\|Ga0075019_10087216	Not Available	1783	Open in IMG/M
3300006174\|Ga0075014_100297869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300006174\|Ga0075014_100800567	Not Available	557	Open in IMG/M
3300006176\|Ga0070765_101440706	Not Available	649	Open in IMG/M
3300006354\|Ga0075021_11114910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300006806\|Ga0079220_11427644	Not Available	589	Open in IMG/M
3300006871\|Ga0075434_100815800	Not Available	949	Open in IMG/M
3300006893\|Ga0073928_10043929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4099	Open in IMG/M
3300006893\|Ga0073928_10079505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2811	Open in IMG/M
3300006893\|Ga0073928_10111888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2268	Open in IMG/M
3300006893\|Ga0073928_10121029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2157	Open in IMG/M
3300007982\|Ga0102924_1216614	Not Available	816	Open in IMG/M
3300009098\|Ga0105245_10511503	Not Available	1218	Open in IMG/M
3300009545\|Ga0105237_10364807	Not Available	1449	Open in IMG/M
3300010375\|Ga0105239_11405508	Not Available	806	Open in IMG/M
3300010379\|Ga0136449_100109937	All Organisms → cellular organisms → Bacteria → Proteobacteria	5602	Open in IMG/M
3300011120\|Ga0150983_10637787	Not Available	736	Open in IMG/M
3300011120\|Ga0150983_11473266	Not Available	936	Open in IMG/M
3300011120\|Ga0150983_12996889	Not Available	757	Open in IMG/M
3300012951\|Ga0164300_10517303	Not Available	686	Open in IMG/M
3300012955\|Ga0164298_10186943	Not Available	1199	Open in IMG/M
3300012958\|Ga0164299_10794158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012986\|Ga0164304_10289045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300012986\|Ga0164304_11522028	Not Available	554	Open in IMG/M
3300012987\|Ga0164307_10120444	Not Available	1680	Open in IMG/M
3300014325\|Ga0163163_10820769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	993	Open in IMG/M
3300014325\|Ga0163163_11056506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → Brevundimonas basaltis	875	Open in IMG/M
3300015371\|Ga0132258_10706161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2539	Open in IMG/M
3300015374\|Ga0132255_105526187	Not Available	535	Open in IMG/M
3300016357\|Ga0182032_11178521	Not Available	659	Open in IMG/M
3300016357\|Ga0182032_11234389	Not Available	644	Open in IMG/M
3300017792\|Ga0163161_11911581	Not Available	528	Open in IMG/M
3300017927\|Ga0187824_10272623	Not Available	592	Open in IMG/M
3300020579\|Ga0210407_10013393	All Organisms → cellular organisms → Bacteria → Proteobacteria	6107	Open in IMG/M
3300020579\|Ga0210407_10017119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5370	Open in IMG/M
3300020579\|Ga0210407_10040734	Not Available	3457	Open in IMG/M
3300020579\|Ga0210407_10070300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2628	Open in IMG/M
3300020579\|Ga0210407_10108530	Not Available	2113	Open in IMG/M
3300020579\|Ga0210407_10140968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1853	Open in IMG/M
3300020579\|Ga0210407_10337569	Not Available	1178	Open in IMG/M
3300020579\|Ga0210407_10384243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1098	Open in IMG/M
3300020579\|Ga0210407_10747157	Not Available	757	Open in IMG/M
3300020579\|Ga0210407_10927021	Not Available	667	Open in IMG/M
3300020580\|Ga0210403_10343293	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300020580\|Ga0210403_11358403	Not Available	540	Open in IMG/M
3300020581\|Ga0210399_11581600	Not Available	506	Open in IMG/M
3300021088\|Ga0210404_10919933	Not Available	500	Open in IMG/M
3300021168\|Ga0210406_10373758	Not Available	1146	Open in IMG/M
3300021168\|Ga0210406_10925289	Not Available	654	Open in IMG/M
3300021170\|Ga0210400_10730237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300021171\|Ga0210405_10343728	Not Available	1178	Open in IMG/M
3300021178\|Ga0210408_10017356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5793	Open in IMG/M
3300021178\|Ga0210408_10085657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2473	Open in IMG/M
3300021181\|Ga0210388_11340307	Not Available	603	Open in IMG/M
3300021181\|Ga0210388_11510475	Not Available	561	Open in IMG/M
3300021401\|Ga0210393_10983501	Not Available	683	Open in IMG/M
3300021404\|Ga0210389_10129435	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300021420\|Ga0210394_10645473	Not Available	929	Open in IMG/M
3300021420\|Ga0210394_11843366	Not Available	503	Open in IMG/M
3300021432\|Ga0210384_10508597	Not Available	1084	Open in IMG/M
3300021432\|Ga0210384_11538973	Not Available	570	Open in IMG/M
3300021475\|Ga0210392_10982834	Not Available	632	Open in IMG/M
3300021478\|Ga0210402_10029661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4723	Open in IMG/M
3300021478\|Ga0210402_10495766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1134	Open in IMG/M
3300021478\|Ga0210402_10939569	Not Available	791	Open in IMG/M
3300022499\|Ga0242641_1018225	Not Available	692	Open in IMG/M
3300022504\|Ga0242642_1066055	Not Available	587	Open in IMG/M
3300022507\|Ga0222729_1004393	Not Available	1273	Open in IMG/M
3300022508\|Ga0222728_1087365	Not Available	575	Open in IMG/M
3300022511\|Ga0242651_1037923	Not Available	564	Open in IMG/M
3300022512\|Ga0242676_1010171	Not Available	846	Open in IMG/M
3300022512\|Ga0242676_1049623	Not Available	521	Open in IMG/M
3300022528\|Ga0242669_1124245	Not Available	521	Open in IMG/M
3300022529\|Ga0242668_1114191	Not Available	562	Open in IMG/M
3300022530\|Ga0242658_1094819	Not Available	706	Open in IMG/M
3300022530\|Ga0242658_1154758	Not Available	594	Open in IMG/M
3300022530\|Ga0242658_1227897	Not Available	518	Open in IMG/M
3300022531\|Ga0242660_1225343	Not Available	525	Open in IMG/M
3300022532\|Ga0242655_10169522	Not Available	651	Open in IMG/M
3300022533\|Ga0242662_10007983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2038	Open in IMG/M
3300022557\|Ga0212123_10020536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7556	Open in IMG/M
3300022557\|Ga0212123_10024853	All Organisms → cellular organisms → Bacteria	6495	Open in IMG/M
3300022557\|Ga0212123_10035125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5000	Open in IMG/M
3300022557\|Ga0212123_10048182	All Organisms → cellular organisms → Bacteria	3952	Open in IMG/M
3300022709\|Ga0222756_1054635	Not Available	606	Open in IMG/M
3300022711\|Ga0242674_1044660	Not Available	594	Open in IMG/M
3300022714\|Ga0242671_1102815	Not Available	546	Open in IMG/M
3300022716\|Ga0242673_1054346	Not Available	683	Open in IMG/M
3300022717\|Ga0242661_1051796	Not Available	768	Open in IMG/M
3300022722\|Ga0242657_1010818	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300024225\|Ga0224572_1027850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1083	Open in IMG/M
3300024225\|Ga0224572_1052019	Not Available	763	Open in IMG/M
3300024225\|Ga0224572_1058507	Not Available	715	Open in IMG/M
3300024271\|Ga0224564_1065688	Not Available	719	Open in IMG/M
3300024271\|Ga0224564_1081510	Not Available	650	Open in IMG/M
3300025916\|Ga0207663_10675501	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300025926\|Ga0207659_10185862	Not Available	1650	Open in IMG/M
3300025927\|Ga0207687_10327113	Not Available	1242	Open in IMG/M
3300025928\|Ga0207700_11227410	Not Available	669	Open in IMG/M
3300025931\|Ga0207644_10249313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1416	Open in IMG/M
3300025931\|Ga0207644_10707000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NFR15	841	Open in IMG/M
3300027174\|Ga0207948_1025496	Not Available	703	Open in IMG/M
3300027884\|Ga0209275_10412766	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300027889\|Ga0209380_10856490	Not Available	512	Open in IMG/M
3300027910\|Ga0209583_10464316	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300029636\|Ga0222749_10546602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. 4M-Z18	630	Open in IMG/M
3300029701\|Ga0222748_1058622	Not Available	676	Open in IMG/M
3300031090\|Ga0265760_10210728	Not Available	659	Open in IMG/M
3300031226\|Ga0307497_10156687	Not Available	951	Open in IMG/M
3300031446\|Ga0170820_17140499	Not Available	519	Open in IMG/M
3300031474\|Ga0170818_103307784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300031708\|Ga0310686_105507129	Not Available	1249	Open in IMG/M
3300031708\|Ga0310686_106063754	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031910\|Ga0306923_11564774	Not Available	687	Open in IMG/M
3300032076\|Ga0306924_12607986	Not Available	504	Open in IMG/M
3300032160\|Ga0311301_10033294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13094	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.77%
Host-Associated	Host-Associated	15.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.54%
Aquatic	Environmental → Aquatic	15.23%
Plants	Host-Associated → Plants	15.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.26%
Sediment	Environmental → Aquatic → Sediment	6.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	5.96%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Roots	Host-Associated → Plants → Roots	1.32%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.30%
Loam	Environmental → Terrestrial → Soil → Loam	15.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	5.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.32%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.32%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	5.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.32%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.62%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	5.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_07720860	2189573004	Grass Soil	MMSYDELVELAGLCSRNSRITTSKEVATELWRMAREYQAQAAKLGVFPEIGDEPPL
INPhiseqgaiiFebDRAFT_1047477401	3300000364	Soil	MLTYEDLVELAXLCARNSRISTSXEVAKELWXMAKEYQAEAGKLGDVPEIDEASPLSSEDR*
JGIcombinedJ51221_100021031	3300003505	Forest Soil	MLTYEDLVDLARLCVRNARITTNREVADELWRMAKEYQVQAATLGDFPDIGDDPPLGNAAR*
JGIcombinedJ51221_100171167	3300003505	Forest Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP*
JGIcombinedJ51221_101296951	3300003505	Forest Soil	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAQ*
JGIcombinedJ51221_101315442	3300003505	Forest Soil	MLIYEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP*
JGIcombinedJ51221_104486031	3300003505	Forest Soil	MMTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRLTVA*
Ga0062387_1008395072	3300004091	Bog Forest Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP*
Ga0062389_1015687812	3300004092	Bog Forest Soil	AREGLPDMLTYEDLVDLARLCVRNAQITTNREVADELWRMAKEYQFQAATLGDFPDIGDDPPLGNAAR*
Ga0062389_1024652191	3300004092	Bog Forest Soil	LLVPRQPDWTSGVMTYDELVELAGLCSRNSRITTSKEVATELWRMAREYQTRAAKLGAFPEIGDEPPL*
Ga0062590_1013706392	3300004157	Soil	MLNYDDLVELARMCARNAHGTTSKDVADELWQMAKEYQAQAAKLGTLPEIGDAPAVWKPPR*
Ga0062594_1032409241	3300005093	Soil	LNYDALVELARMCARNAHGTTSKDVADELWQMAKEYQAQAAKLGTLPEIGDAPAVWKPPR
Ga0066823_100860671	3300005163	Soil	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR*
Ga0070666_103847592	3300005335	Switchgrass Rhizosphere	MLNYDDLVELARMRARNAHSTTSKDVADELWQMTKEYQVQAAKLGILPEIGDAPAVWKPAR*
Ga0070668_1003132951	3300005347	Switchgrass Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDGESAPVHSTR*
Ga0070675_1001894152	3300005354	Miscanthus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELCRMAKEYQEMAAKLGTLPEIDGESVPVHSTR*
Ga0070675_1001918314	3300005354	Miscanthus Rhizosphere	AMLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQQMAAKLGTLPEIDSDPVHVQST*
Ga0070675_1017520562	3300005354	Miscanthus Rhizosphere	LVELARMCARNAHGTTSKDVADELWQMAKEYQAQAAKLGTLPEIGDAPAVWKPPR*
Ga0070673_1000102461	3300005364	Switchgrass Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSEPVP
Ga0070709_103497743	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSEPVPVQSTR*
Ga0070714_1003221092	3300005435	Agricultural Soil	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSDPVHVQSTR*
Ga0070714_1004048751	3300005435	Agricultural Soil	MLTYDELVELATLCAHNSRIATSREVADELWRMAKEYQAQAAKLGASPEIGDQTRVGSRLQRQMAGD*
Ga0070713_1019756771	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMTYEELVDLARLCSRNSRIATSREVATELWRMAKEYQAQAAKLGVCPEIGDEPSPWNWGRLTK*
Ga0070684_1017810342	3300005535	Corn Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDGESVPVHSTR*
Ga0068856_1025724392	3300005614	Corn Rhizosphere	DLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSDPVHVQSMR*
Ga0066903_1023621302	3300005764	Tropical Forest Soil	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSEPVPLQSTR*
Ga0066903_1039183061	3300005764	Tropical Forest Soil	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEQAGKLGTLPEIDSKPVLVESTR*
Ga0070717_101289634	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLTYDDLVELARLCARNSRIATSRDVADELWQMAKEYQAQAAKLGTFPEIGDEPMTWNPAR*
Ga0070717_102177671	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RPAMLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSDPVHVQSTR*
Ga0075023_1002449032	3300006041	Watersheds	MMTYDELVEIAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWGR*
Ga0066652_1006568922	3300006046	Soil	MLTYEDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAQ*
Ga0075028_1005204751	3300006050	Watersheds	SKEPAMLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR*
Ga0075026_1006203481	3300006057	Watersheds	MGRTGMPIYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP*
Ga0075026_1007929863	3300006057	Watersheds	MTYDELVELAGLCSRNSRTTTSREVATELWRMAREYQTQAAKLGAFPEIGDEPPL*
Ga0075026_1010395852	3300006057	Watersheds	LRPFSSLFPERTSVMMSYDELVELAGLCSRNSRITTSKEVPTELWRMAREHQAQAAKLGVFPEIGDEPPL*
Ga0075019_100872163	3300006086	Watersheds	MMMTYDELVEIAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWGR*
Ga0075014_1002978692	3300006174	Watersheds	MLTDELVELARLCSRNSRIATSRDVSTEFWRMAKEYQAQAAKLGMFPEIGDEPPLWNWSR
Ga0075014_1008005672	3300006174	Watersheds	MLTYEDVVELARLCVRNARITTNREVADELWRMAKEYQAKAATLGDFPEIGDETPLGHAAR*
Ga0070765_1014407061	3300006176	Soil	LVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRLTVA*
Ga0075021_111149102	3300006354	Watersheds	MGQTAMLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP*
Ga0079220_114276442	3300006806	Agricultural Soil	MTYEELVELAILCARNARMTTSREVAEELWRMAKEYQAQAAQLGDAPEIDE*
Ga0075434_1008158002	3300006871	Populus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSDPAHVQSTR*
Ga0073928_100439295	3300006893	Iron-Sulfur Acid Spring	MLTYEDLVELARLCVRNARITTNREVADQLWQMAKEYQAKAATLGDFPEIGDESPLGHATR*
Ga0073928_100795054	3300006893	Iron-Sulfur Acid Spring	MNELVKLAGLCSRNSRITTSREVATELWRMAKEYQAQAAKLGVFPEIGDEPPLWNWGR*
Ga0073928_101118881	3300006893	Iron-Sulfur Acid Spring	MLIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAEMGDFPEIGDDPPLGSRPRP*
Ga0073928_101210291	3300006893	Iron-Sulfur Acid Spring	MLIYEDLVELARMCARNARITTNRDVADELWRMAKEYQAKAAEMGDHPEIGDEPPLGSRPRP*
Ga0102924_12166141	3300007982	Iron-Sulfur Acid Spring	AMLIYEDLVELARMCARNARITTNRDVADELWRMAKEYQAKAAEMGDHPEIGDEPPLGSRPRP*
Ga0105245_105115031	3300009098	Miscanthus Rhizosphere	NYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSDPVHVQST*
Ga0105237_103648071	3300009545	Corn Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQQMAAKLGTLPEIDGESVPVHSTR*
Ga0105239_114055081	3300010375	Corn Rhizosphere	MLNYDDLVELARLCARNAHSSTSRDVADEFWKMAKEYQAQAAKLGTVPEIGDAPRGWKTAR*
Ga0136449_1001099376	3300010379	Peatlands Soil	MGQTVMLIYEDLVELARMCARNAQITTTREVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPGP*
Ga0150983_106377871	3300011120	Forest Soil	SVMMTYDELVELAGLCSRNSRTTTSREVATELWRMAREYQAQAAKLGVLPEIGDEPPVSNWGR*
Ga0150983_114732663	3300011120	Forest Soil	MMTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRRLTVA*
Ga0150983_129968892	3300011120	Forest Soil	MTYDELVELAGLCSRNSRITTSKEVATELWRMAREYQTQAAKLGAFPENR*
Ga0164300_105173031	3300012951	Soil	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAAHLGSAPELGDEPPVWNSAR*
Ga0164298_101869432	3300012955	Soil	MGQTAMLIYEDLVELARMCARNARITTSRDVADELWRMAYQAQAAEMGDFPEIGDEPRPQP*
Ga0164299_107941581	3300012958	Soil	MTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAARLGVFPEIG
Ga0164304_102890453	3300012986	Soil	MLTYDELVELAGLCSHNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPL*
Ga0164304_115220281	3300012986	Soil	MGQTAMLIYEDLVELARMCARNARITTSRDVADELWRMAYQAQAAEMGDFPEIGDEPPLGSRPRP*
Ga0164307_101204442	3300012987	Soil	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAAHLGSAPELGDEPPLWNSAHKEHRK*
Ga0163163_108207691	3300014325	Switchgrass Rhizosphere	MMTYEDLVELARLCARNARITTNREVADELWRMAKEYQAKAATLGDFPDIGDEYSFGNAAR*
Ga0163163_110565063	3300014325	Switchgrass Rhizosphere	MLNYDELAELALMCAYNARITTSEAVADELWRMAEEYRAKAALLGNAPEIGKPPAMARRSE*
Ga0132258_107061611	3300015371	Arabidopsis Rhizosphere	DDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSEPVPVQSTR*
Ga0132255_1055261871	3300015374	Arabidopsis Rhizosphere	MLSYEDLVELAKMCARNAWTTTSNEVAEELWRMAKEYQAQAGELGDFPEIGDGPPLGSRSWT*
Ga0182032_111785212	3300016357	Soil	MLNYEDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGAFPEIDSEPVHVEST
Ga0182032_112343891	3300016357	Soil	MLTYNELVELASLCARNARIATSKDVADELRRMAEEYRDQAAGLGEVPELGDEPPPRKAA
Ga0163161_119115812	3300017792	Switchgrass Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQQMAAKLGTLPEIDSDPVHVQST
Ga0187824_102726232	3300017927	Freshwater Sediment	TYDDLVELARLCARNSRIATSRDVADELWQMAKEYQAQAAKLGTFPEIGDEPMTWNPAR
Ga0210407_100133935	3300020579	Soil	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSA
Ga0210407_100171193	3300020579	Soil	MPIYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP
Ga0210407_100407347	3300020579	Soil	MMSYDELVELAGLCSRNSRITTSKEVATELWRMAREHQAQAAKLGVFPEIGDEPPL
Ga0210407_100703001	3300020579	Soil	MMTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRLTVA
Ga0210407_101085303	3300020579	Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0210407_101409684	3300020579	Soil	MMGQTAMLIHEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0210407_103375692	3300020579	Soil	MMTYDELVELAGLCSRNSRTTTSREVATELWRMAREYQAQAAKLGVLPEIGDEPPVSNWG
Ga0210407_103842432	3300020579	Soil	MLTYEDLVDLARLCVRNARITTNREVADELWRMAKEYQVQAATLGDFPDIGDDPPLGNAA
Ga0210407_107471571	3300020579	Soil	MMTYDELVEIAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWG
Ga0210407_109270212	3300020579	Soil	MLNYDDLVELASLCARNSRIATSRDVADELWRMAKEYQAQAAKLGEFPKIGREPPVSNPV
Ga0210403_103432933	3300020580	Soil	MLTYIELVDLTQLCARNAWTTTSSEVADELWRMAKEYQAQAAEMGNGDEPPLGSRPRP
Ga0210403_113584031	3300020580	Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIG
Ga0210399_115816002	3300020581	Soil	MMTYDELVELAGLCSHNSRIATSREVATELWRMAREYQAQAAELGAFPEIGDEPPLWNWAAK
Ga0210404_109199331	3300021088	Soil	MMGQTAMLIHEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPA
Ga0210406_103737581	3300021168	Soil	MLNYDDLVELASLCARNSRIATSRDVADELWRMAKEYQAQAAKLGAFPEIGYEPPVSNPV
Ga0210406_109252891	3300021168	Soil	LVELARMCARNTRIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP
Ga0210400_107302372	3300021170	Soil	MLIYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP
Ga0210405_103437282	3300021171	Soil	MLIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAELGDFPEIGDEPGPQP
Ga0210408_100173568	3300021178	Soil	MLIHEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPR
Ga0210408_100856571	3300021178	Soil	MGRTGILIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPPLGSRPRP
Ga0210388_113403072	3300021181	Soil	YDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0210388_115104751	3300021181	Soil	MLIYEDLVELARMCARNARITTSRGVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0210393_109835012	3300021401	Soil	TYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0210389_101294352	3300021404	Soil	MMGQTAMLIYEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPPLGSRP
Ga0210394_106454732	3300021420	Soil	ERCDDYDELVELAGLCSRNSRITTSKEVATELWRMAREYQTQAAKLGAFPEIGDEPPL
Ga0210394_118433661	3300021420	Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGD
Ga0210384_105085973	3300021432	Soil	MLTYDDLVELARLCARNSRMATTRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSA
Ga0210384_115389732	3300021432	Soil	MMGQTAMLIYEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0210392_109828342	3300021475	Soil	MLIYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGS
Ga0210402_100296613	3300021478	Soil	MTYDELVELAGLCSRNSRITTSKEVATELWRMAREYQTQAAKLGAFPEIGDEPPL
Ga0210402_104957661	3300021478	Soil	MLTYIELVDLTQLCARNAWTTTSSEVADELWRMAKEYQAQAAEMGNFPEIGDEPPLGSRPRP
Ga0210402_109395693	3300021478	Soil	MMTYDELVELAGLCSRNYRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRLTVA
Ga0242641_10182252	3300022499	Soil	MMTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWG
Ga0242642_10660553	3300022504	Soil	VTMMTYDELVELAGLCSRNSRIATSREVATELWRMAREYQAQAAKLGAFPEIGDEPPLWNWGR
Ga0222729_10043931	3300022507	Soil	PAMLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0222728_10873652	3300022508	Soil	AMLNYDDLVELASLCARNSRIATSRDVADELWRMAREYKAQAANLGSAPELGDEPPVWNSAH
Ga0242651_10379233	3300022511	Soil	AMLIYEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0242676_10101711	3300022512	Soil	LAMLNYDDLVELASLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0242676_10496232	3300022512	Soil	IYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP
Ga0242669_11242452	3300022528	Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETPLGSRPRP
Ga0242668_11141912	3300022529	Soil	MMTYDELVELAGLCSRNSRTTTSREVATELWRMVKEYQAQAAKLGAFPEIGDEPPTWNWG
Ga0242658_10948191	3300022530	Soil	QAVTMMTYDELVELAGLCSRNSRIATSREVATELWRMAKEYQAQAAKLGAFPEIGDEPPRWNWGRLTVA
Ga0242658_11547581	3300022530	Soil	GPLAMLNYDDLVELASLCARNSRIATSRDVADELWRMAKEYQAQAAKLGAFPEIGYEPPVSNPVR
Ga0242658_12278973	3300022530	Soil	SVMMTYDELVELAGLCSRNSRTTTSREVATELWRMAREYQAQAAKLGVLPEIGDEPPVSNWGR
Ga0242660_12253432	3300022531	Soil	AMLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0242655_101695221	3300022532	Soil	EDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0242662_100079831	3300022533	Soil	DDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0212123_100205367	3300022557	Iron-Sulfur Acid Spring	MLTYEDLVELARLCVRNARITTNREVADQLWQMAKEYQAKAATLGDFPEIGDESPLGHAT
Ga0212123_100248539	3300022557	Iron-Sulfur Acid Spring	MLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQASNLGSAPELGDEPPVWNSA
Ga0212123_100351256	3300022557	Iron-Sulfur Acid Spring	MLIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAEMGDFPEIGDDPPLGSRPRP
Ga0212123_100481825	3300022557	Iron-Sulfur Acid Spring	MLIYEDLVELARMCARNARITTNRDVADELWRMAKEYQAKAAEMGDHPEIGDEPPLGSRPRP
Ga0222756_10546351	3300022709	Soil	TAMLIHEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0242674_10446603	3300022711	Soil	LIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPRP
Ga0242671_11028151	3300022714	Soil	AMLTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAH
Ga0242673_10543462	3300022716	Soil	TYDELVELAGLCSRNSRTTTSREVATELWRMAREYQAQAAKLGVLPEIGDEPPVSNWGR
Ga0242661_10517962	3300022717	Soil	LTYDDLVELARLCARNSRIATSRDVADELWRMAREYQAQAANLGSAPELGDEPPVWNSAR
Ga0242657_10108183	3300022722	Soil	MMMTYDELVEIAGLCSRNSRIATREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWG
Ga0224572_10278503	3300024225	Rhizosphere	MPIYEDLVELARMCARNARIMTSRDVADELWRMAKEYQAQAAEMGDFPEIG
Ga0224572_10520192	3300024225	Rhizosphere	DELVELAGLCSRNSRITTSKEVATELWRMAREYQTQAAKLGAFPEIGDEPPL
Ga0224572_10585071	3300024225	Rhizosphere	MMSYDELVELAGLCSRNSRITTSKEVATELWRMAKEHQAQAAKLGVFPEIGDEPPL
Ga0224564_10656881	3300024271	Soil	PDWTSGVMTYDELVELAGLCSRNSRITTSKEVATELWRMAREHQAQAAKLGVFPEIGDEPPL
Ga0224564_10815101	3300024271	Soil	MMGPMLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0207663_106755011	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLTYDELVELATLCAHNSRIATSREVADELWRMAKEYQAQAAKLGTFPEIGDEPMTWNPA
Ga0207659_101858622	3300025926	Miscanthus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELCRMAKEYQEMAAKLGTLPEIDGESVPVHST
Ga0207687_103271132	3300025927	Miscanthus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEID
Ga0207700_112274101	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLNYDDLVELARLCARNSRIATSRDVADELWRMAKEYQEMAAKLGTLPEIDSEPVPVQ
Ga0207644_102493132	3300025931	Switchgrass Rhizosphere	MLNYDDLVELARMRARNAHSTTSKDVADELWQMTKEYQVQAAKLGILPEIGDAPAVWKPA
Ga0207644_107070002	3300025931	Switchgrass Rhizosphere	PMLNYDDLVELARLCARNAHSSTSRDVADEFWKMAKEYQAQAAKLGTVPEIGDAPRGWKTAR
Ga0207948_10254961	3300027174	Forest Soil	MLIYEDLVELARMCARNAQITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0209275_104127661	3300027884	Soil	IYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0209380_108564902	3300027889	Soil	MMTYDELVELAGLCSRNSRIATSREVATELWRMAREYQAQAAKLGAFPEIGDEPPLWNWG
Ga0209583_104643162	3300027910	Watersheds	LVPPSTMGQTAMLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDEPRPQP
Ga0222749_105466021	3300029636	Soil	LIRGRTDMLTYEDLVDLARLCVRNARITTNREVADELWRMAKEYQVQAATLGDFPDIGDDPPLGNAAR
Ga0222748_10586222	3300029701	Soil	MMTYDELVEIAGLCSRNSRIATREVATELWRMAKEYQAQAAKLGAFPEIGDEPPTWNWGR
Ga0265760_102107281	3300031090	Soil	LVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETPLGSRPRP
Ga0307497_101566872	3300031226	Soil	MTYDELVELAGLCSRNSRITTSKEVATELWRMAREHQAQAAKLGVFPEIGDEPPL
Ga0170820_171404991	3300031446	Forest Soil	GDKAVMMMTYDELVEIAGLCSRNSRIATSREVATEFWRMAKEYQAQAAKLGAFPEIGDEPPLWNWGR
Ga0170818_1033077843	3300031474	Forest Soil	MLIYEDLVELARMCARNARITTSRDVADELWRMAKEYQAQAAEMGDFPEIGDETSLGSRPRP
Ga0310686_1055071292	3300031708	Soil	MLIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAELGDFPEIGDEPRPQP
Ga0310686_1060637541	3300031708	Soil	MLIYEDLVELARMCARNARITTTREVADELWRMAKEYQAQAAEMGDFPEIGDEPPLGSRPRP
Ga0306923_115647741	3300031910	Soil	MLTYNELGELASLCARNARIATSKDVADELRRMAEEYRDQAARLGEVPELGDEHPPRKAA
Ga0306924_126079861	3300032076	Soil	MLTYNELVELASLCARNARIATSKDVADELRRMAEEYRDQAAGLGEVPELGDEPPPQKAV
Ga0311301_100332949	3300032160	Peatlands Soil	MLIYEDLVELARMCARNAQITTTREVADELWRMAKEYQAQAAEMGDFPEIGNEPPAGSPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences