Metagenome / Metatranscriptome Family F046969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046969
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	75 residues
Representative Sequence	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Number of Associated Samples	76
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.13 %
% of genes near scaffold ends (potentially truncated)	34.67 %
% of genes from short scaffolds (< 2000 bps)	87.33 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere (10.667 % of family members)
Environment Ontology (ENVO)	Unclassified (28.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF13561	adh_short_C2	40.67
PF01625	PMSR	18.67
PF13424	TPR_12	6.00
PF00106	adh_short	4.67
PF14333	DUF4389	1.33
PF00202	Aminotran_3	1.33
PF13432	TPR_16	0.67
PF00293	NUDIX	0.67
PF13556	HTH_30	0.67
PF13579	Glyco_trans_4_4	0.67
PF13532	2OG-FeII_Oxy_2	0.67
PF13529	Peptidase_C39_2	0.67
PF09297	zf-NADH-PPase	0.67
PF07311	Dodecin	0.67
PF13492	GAF_3	0.67
PF02653	BPD_transp_2	0.67
PF13185	GAF_2	0.67
PF04020	Phage_holin_4_2	0.67
PF00347	Ribosomal_L6	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	18.67
COG0097	Ribosomal protein L6P/L9E	Translation, ribosomal structure and biogenesis [J]	0.67
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.67
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.67
COG2816	NADH pyrophosphatase NudC, Nudix superfamily	Nucleotide transport and metabolism [F]	0.67
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
All Organisms	root	All Organisms	49.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
cellular organisms	root	All Organisms → cellular organisms	49.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.00 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.00 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.67 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.00 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Aciditerrimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.67 %
Aciditerrimonas ferrireducens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	2.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105519096	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300000956\|JGI10216J12902_113149078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1573	Open in IMG/M
3300001686\|C688J18823_10036384	All Organisms → cellular organisms → Bacteria	3387	Open in IMG/M
3300002568\|C688J35102_118588892	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300002568\|C688J35102_119063995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300002568\|C688J35102_120009589	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300002568\|C688J35102_120330943	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300002568\|C688J35102_120613637	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300002568\|C688J35102_120642017	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300002568\|C688J35102_120733049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1443	Open in IMG/M
3300003267\|soilL1_10104618	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300004081\|Ga0063454_101223682	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300004081\|Ga0063454_101848852	Not Available	530	Open in IMG/M
3300004153\|Ga0063455_100330770	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300004153\|Ga0063455_101437389	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300004479\|Ga0062595_100834212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300004479\|Ga0062595_102480126	Not Available	516	Open in IMG/M
3300005181\|Ga0066678_10580517	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005327\|Ga0070658_10008891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8073	Open in IMG/M
3300005327\|Ga0070658_10039908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3788	Open in IMG/M
3300005327\|Ga0070658_10141983	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300005327\|Ga0070658_10155084	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300005336\|Ga0070680_100702491	Not Available	870	Open in IMG/M
3300005336\|Ga0070680_100975181	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005336\|Ga0070680_101046297	Not Available	705	Open in IMG/M
3300005339\|Ga0070660_100011887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6207	Open in IMG/M
3300005339\|Ga0070660_101908902	Not Available	506	Open in IMG/M
3300005355\|Ga0070671_100984734	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005366\|Ga0070659_101802798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300005435\|Ga0070714_100012607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6751	Open in IMG/M
3300005435\|Ga0070714_100309689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1474	Open in IMG/M
3300005435\|Ga0070714_100345184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1397	Open in IMG/M
3300005435\|Ga0070714_100405104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1290	Open in IMG/M
3300005435\|Ga0070714_101014074	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005435\|Ga0070714_101194683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300005435\|Ga0070714_101229326	Not Available	731	Open in IMG/M
3300005435\|Ga0070714_101538918	Not Available	650	Open in IMG/M
3300005439\|Ga0070711_100784900	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005455\|Ga0070663_101502101	Not Available	599	Open in IMG/M
3300005458\|Ga0070681_10337353	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005458\|Ga0070681_10887236	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005471\|Ga0070698_100533950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1112	Open in IMG/M
3300005529\|Ga0070741_10009302	All Organisms → cellular organisms → Bacteria	19187	Open in IMG/M
3300005529\|Ga0070741_10040766	All Organisms → cellular organisms → Bacteria	5998	Open in IMG/M
3300005529\|Ga0070741_10101481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3052	Open in IMG/M
3300005529\|Ga0070741_10276160	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300005532\|Ga0070739_10000141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	155773	Open in IMG/M
3300005532\|Ga0070739_10114374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1495	Open in IMG/M
3300005532\|Ga0070739_10442021	Not Available	597	Open in IMG/M
3300005563\|Ga0068855_100858222	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005563\|Ga0068855_100871871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300005563\|Ga0068855_100923288	Not Available	921	Open in IMG/M
3300005764\|Ga0066903_102838913	Not Available	940	Open in IMG/M
3300005885\|Ga0075284_1012158	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300005896\|Ga0075282_1022073	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006031\|Ga0066651_10316992	Not Available	836	Open in IMG/M
3300006755\|Ga0079222_10397991	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006755\|Ga0079222_10411914	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006791\|Ga0066653_10051043	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300006871\|Ga0075434_102049798	Not Available	577	Open in IMG/M
3300006954\|Ga0079219_12425380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300009093\|Ga0105240_12061336	Not Available	592	Open in IMG/M
3300009137\|Ga0066709_101098479	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300010152\|Ga0126318_10142536	Not Available	835	Open in IMG/M
3300010152\|Ga0126318_10432068	Not Available	605	Open in IMG/M
3300010152\|Ga0126318_10468247	Not Available	504	Open in IMG/M
3300010152\|Ga0126318_10904179	Not Available	518	Open in IMG/M
3300010373\|Ga0134128_10842867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1016	Open in IMG/M
3300010396\|Ga0134126_11840836	Not Available	663	Open in IMG/M
3300010396\|Ga0134126_12813820	Not Available	527	Open in IMG/M
3300012204\|Ga0137374_10074956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3310	Open in IMG/M
3300012212\|Ga0150985_106380502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300012212\|Ga0150985_108957206	Not Available	682	Open in IMG/M
3300012212\|Ga0150985_112460613	Not Available	551	Open in IMG/M
3300012212\|Ga0150985_117845757	Not Available	682	Open in IMG/M
3300012212\|Ga0150985_120079925	Not Available	700	Open in IMG/M
3300012469\|Ga0150984_103759847	Not Available	541	Open in IMG/M
3300012469\|Ga0150984_107708812	Not Available	607	Open in IMG/M
3300012469\|Ga0150984_111006867	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012469\|Ga0150984_112032755	Not Available	718	Open in IMG/M
3300012469\|Ga0150984_113961405	Not Available	523	Open in IMG/M
3300012469\|Ga0150984_115772855	Not Available	719	Open in IMG/M
3300012469\|Ga0150984_118429168	Not Available	532	Open in IMG/M
3300012960\|Ga0164301_10635870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300012985\|Ga0164308_10233891	Not Available	1422	Open in IMG/M
3300013102\|Ga0157371_11091430	Not Available	612	Open in IMG/M
3300013105\|Ga0157369_10016380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8339	Open in IMG/M
3300013105\|Ga0157369_10123087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2751	Open in IMG/M
3300013105\|Ga0157369_10861758	Not Available	930	Open in IMG/M
3300013105\|Ga0157369_11741880	Not Available	633	Open in IMG/M
3300014166\|Ga0134079_10185066	Not Available	864	Open in IMG/M
3300014497\|Ga0182008_10830130	Not Available	539	Open in IMG/M
3300015371\|Ga0132258_13429568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300017930\|Ga0187825_10290649	Not Available	607	Open in IMG/M
3300018431\|Ga0066655_10432075	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300018468\|Ga0066662_11324436	Not Available	740	Open in IMG/M
3300020069\|Ga0197907_10259136	Not Available	931	Open in IMG/M
3300020069\|Ga0197907_10910056	Not Available	535	Open in IMG/M
3300020069\|Ga0197907_11337067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1643	Open in IMG/M
3300020069\|Ga0197907_11452015	Not Available	514	Open in IMG/M
3300020070\|Ga0206356_10615428	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1626	Open in IMG/M
3300020076\|Ga0206355_1305384	Not Available	520	Open in IMG/M
3300020077\|Ga0206351_10619019	Not Available	702	Open in IMG/M
3300020080\|Ga0206350_10324464	Not Available	558	Open in IMG/M
3300020080\|Ga0206350_11601957	Not Available	805	Open in IMG/M
3300020081\|Ga0206354_11147054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Aciditerrimonas → Aciditerrimonas ferrireducens	1503	Open in IMG/M
3300020082\|Ga0206353_10051666	Not Available	585	Open in IMG/M
3300020082\|Ga0206353_10112050	Not Available	752	Open in IMG/M
3300021445\|Ga0182009_10770513	Not Available	525	Open in IMG/M
3300022467\|Ga0224712_10128028	Not Available	1106	Open in IMG/M
3300022467\|Ga0224712_10393945	Not Available	659	Open in IMG/M
3300022467\|Ga0224712_10474340	Not Available	603	Open in IMG/M
3300022467\|Ga0224712_10568124	Not Available	552	Open in IMG/M
3300025898\|Ga0207692_11128707	Not Available	520	Open in IMG/M
3300025909\|Ga0207705_10078473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2403	Open in IMG/M
3300025909\|Ga0207705_10120772	Not Available	1944	Open in IMG/M
3300025909\|Ga0207705_10138211	Not Available	1818	Open in IMG/M
3300025912\|Ga0207707_10256038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1520	Open in IMG/M
3300025916\|Ga0207663_10408631	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300025917\|Ga0207660_10392554	Not Available	1117	Open in IMG/M
3300025920\|Ga0207649_11217015	Not Available	595	Open in IMG/M
3300025921\|Ga0207652_10994398	Not Available	737	Open in IMG/M
3300025929\|Ga0207664_10356564	Not Available	1295	Open in IMG/M
3300025929\|Ga0207664_10470255	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300025929\|Ga0207664_10543523	Not Available	1042	Open in IMG/M
3300025929\|Ga0207664_10677371	Not Available	927	Open in IMG/M
3300025929\|Ga0207664_11082159	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025981\|Ga0207640_12090954	Not Available	513	Open in IMG/M
3300026142\|Ga0207698_10225807	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300027773\|Ga0209810_1000007	All Organisms → cellular organisms → Bacteria	894281	Open in IMG/M
3300027773\|Ga0209810_1041382	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300028824\|Ga0307310_10574586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300030501\|Ga0268244_10753027	Not Available	539	Open in IMG/M
3300031938\|Ga0308175_100206751	Not Available	1937	Open in IMG/M
3300031938\|Ga0308175_100660524	Not Available	1131	Open in IMG/M
3300031938\|Ga0308175_100716924	Not Available	1088	Open in IMG/M
3300031938\|Ga0308175_101042439	Not Available	905	Open in IMG/M
3300031938\|Ga0308175_101123427	Not Available	872	Open in IMG/M
3300031938\|Ga0308175_101642033	Not Available	719	Open in IMG/M
3300031938\|Ga0308175_102424248	Not Available	588	Open in IMG/M
3300031938\|Ga0308175_102557196	Not Available	571	Open in IMG/M
3300031996\|Ga0308176_10056266	All Organisms → cellular organisms → Bacteria	3255	Open in IMG/M
3300031996\|Ga0308176_10130202	Not Available	2270	Open in IMG/M
3300031996\|Ga0308176_10638920	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300031996\|Ga0308176_10856232	Not Available	953	Open in IMG/M
3300032074\|Ga0308173_11139289	Not Available	728	Open in IMG/M
3300032074\|Ga0308173_12206972	Not Available	519	Open in IMG/M
3300034268\|Ga0372943_0230933	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300034384\|Ga0372946_0068807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.33%
Host-Associated	Host-Associated	26.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.00%
Plants	Host-Associated → Plants	26.67%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.33%
Freshwater	Environmental → Aquatic → Freshwater	3.33%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.33%
Loam	Environmental → Terrestrial → Soil → Loam	25.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.67%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	10.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	8.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.33%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.33%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005885	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401	Environmental	Open in IMG/M
3300005896	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030501	Agave microbial communities from Guanajuato, Mexico - Mg.Sf.e (v2)	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1055190961	3300000364	Soil	MAVKTEEKVRSAIARVGEGLTEKAWTVGRDAKTEKRKRIAWGLLQGALGALAAIGARRVVSRAWGVLTGEQPPAKR*
JGI10216J12902_1131490782	3300000956	Soil	VAVKTEEKVRSAIAHFGEGIAEMAWTVGRDAKVERRKRLLWGLLQGMVGAAFTIGARRLGAKAWRVLTGEQPPRPG*
C688J18823_100363844	3300001686	Soil	MAVKTEEKVRSAIARVGEELSQRAWTVGRDAKAEKRKRVAWGVLQGALGAIATIGARRAVSRVWGVLTGEQPPAKR*
C688J35102_1185888921	3300002568	Soil	MAVKTEEKVRSGIARVGEEIVERAWTVGRDKKAEQRKRIAWGVVQGVVGAVFTVAARRVGAKAWGILTGEQPPTKK*
C688J35102_1190639952	3300002568	Soil	VKTEDRVRSAIARAGEELSEKAWTVGRDAKAEKRKRMAWGVVQGAIGAVFTLAARRAGAKAWGILTGERPPTKR*
C688J35102_1200095892	3300002568	Soil	MAVKTEDKVRSAIARVGEELSEKAWTVGRDAKAEKRKRIAWGVLQGALGAIATIGARRGVSRVWGVLTGEQPPARR*
C688J35102_1203309432	3300002568	Soil	MAVKTEEKVRSAIARVGEELSEKAWTIGRDAKAEKRKRLAWGVLQGALGAIATIGARRGVSRVWGVLTGEQPPARR*
C688J35102_1206136372	3300002568	Soil	MAVKTEEKVRSAIARVGEELSQRAWTVGRDAKAEKRKRVAWGVLQGALGAIATIGARRVVSRVWGVLTGEQPPAKR*
C688J35102_1206420172	3300002568	Soil	MAVKTEDRVRAAIARAGEELTEKAWTVGRDAKAEKRKRLAWGVVQGVVGAAFTLGARRVGAKAWGVLTGEQPPGRK*
C688J35102_1207330492	3300002568	Soil	MAVKTEEKVRSAIARVGEELSEKAWTVGRDAKAEKRKRIAWGVLQGALGAVATIGARRGVSRVWGVLTGEQPPARR*
soilL1_101046182	3300003267	Sugarcane Root And Bulk Soil	MAVKTEDRVRSAIARVGEGIQEKAWTVGRDAKKEKRKRVLWGALQGALGAAATIGTRRVVSRLWGVLTGERPPARR*
Ga0063454_1012236821	3300004081	Soil	VGEEIVERAWTVGRDKKAEQRKRIAWGVVQGVVGAVFTVAARRVGAKAWGILTGEQPPTKK*
Ga0063454_1018488522	3300004081	Soil	MAVKTEDRVRAVIARAGEELTEKAWTLGRDAKAEKRKRLAWGVVQGVIGAAFTLGARRVGAKAWGVLTGEQPPTRK*
Ga0063455_1003307702	3300004153	Soil	MAVKTEDKVRSGIARLGEEIAERAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPAKTK*
Ga0063455_1014373892	3300004153	Soil	MAVKTEERVRAAIARAGEELTEKAWTVGRDPKAEKRKRIAWGVVQGVVGAAFTIGARRVGAKAWGVLTGEQPPTKK*
Ga0062595_1008342122	3300004479	Soil	MAVKTDQKVRTAIARVGEGISEKAWTIGRDPKTERRKRLLWGLLQGALGAAFTLGARRVGAKAWGVLTGEQPPTKK*
Ga0062595_1024801262	3300004479	Soil	MAVKTEDKVRSRIARIGEGIAEKAWTVGRDAKVEKRKRLAWGVLQGALGAVFTVAARRLGARAWGVLTGERP
Ga0066678_105805172	3300005181	Soil	LKTEEKVRTAIARVGEGIAEKAWTLGRDKKAEQRKRLLWGVVQGVVGAAFTLGARRVGAKVWGVLTGERPPTKK*
Ga0070658_100088915	3300005327	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0070658_100399083	3300005327	Corn Rhizosphere	MSAKTEERVRSAIARAGEEISEKAWTVGRDKKAEQRKRLAWGVVQGVIGAVFTVGARRIGAKAWGVLTGERPPTKR*
Ga0070658_101419834	3300005327	Corn Rhizosphere	MAAKTEDRVRSAIARVGEEVSEKAWTVGRDAKTEKRKRLAWGVVQGVVGAVFTLAARRVGAKTWGVLTGEQPPTKKSP*
Ga0070658_101550842	3300005327	Corn Rhizosphere	MAAKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKTK*
Ga0070680_1007024912	3300005336	Corn Rhizosphere	MGVKTEEKVRAAIARAGEELAEKAWTVGRDPKTEKRKRLAWGLVQGVVGAVFTLGARRLGAKAWGVL
Ga0070680_1009751812	3300005336	Corn Rhizosphere	VAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0070680_1010462972	3300005336	Corn Rhizosphere	MAVKTEEKVRAAIARAGEELSEKAWTVGRDKKAEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGILTGERPPTKR*
Ga0070660_1000118874	3300005339	Corn Rhizosphere	MAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0070660_1019089022	3300005339	Corn Rhizosphere	MAAKTEDRVRSAIARVGEEVSEKAWTVGRDAKTEKRKRLAWGVVQGVVGAVFTLGARRLGAKAWGVLTGEQPPTKK*
Ga0070671_1009847342	3300005355	Switchgrass Rhizosphere	MAVKTEEKVRSAIARVGEGLSEKAWTVGRDPKVEKRKRVAWGVLQGALGAVATIGARRIVSRVWGVLTGEQPPTRK*
Ga0070659_1018027981	3300005366	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRGKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0070714_1000126077	3300005435	Agricultural Soil	MAVKTEDKVRSRIARIGEGIAEKAWTVGRDAKVEKRKRLAWGVLQGALGAVFTVAARRLGAKAWGVLTGERPPVKKQV*
Ga0070714_1003096892	3300005435	Agricultural Soil	VDAIRSGIARIGDGIAEKAWTVGRDEKAERKKRIAWGVVQGSIGAVFTLVARRLGAKAWGVLTGEQPPGRR*
Ga0070714_1003451842	3300005435	Agricultural Soil	VNAIRGGIARVGEGIAEKAWTLGRNEKAERKKRIVWGILQGAIGAVFTLGARRAGAKAWGVLTGERPPARK*
Ga0070714_1004051041	3300005435	Agricultural Soil	MAVKTEEKVRSGIARVGEGIAEKAWTVGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPVKR*
Ga0070714_1010140742	3300005435	Agricultural Soil	MAVKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKTK*
Ga0070714_1011946831	3300005435	Agricultural Soil	MAVKTEEKVRSAIARAGEELSEKAWTVGRDAKSQKRKRLAWGVVQGAIGAVFTLAARRAGAKAWGVLTGERPPTK
Ga0070714_1012293262	3300005435	Agricultural Soil	MAVKTEEKVRSAIARVGEGITEKAWTVGRDAKAERKKRLAWGVLQGALGAAATIVARRAGAKLYGVLTGERPPTKK*
Ga0070714_1015389182	3300005435	Agricultural Soil	MAVKTEEKVRSAVARVGQGIVEKAWTVGRDPKTERKKRLAWGALQGALGAAAAIAARRVGAKIYGVLTGE
Ga0070711_1007849002	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKTEDKVRSAIARVGDGLSEKAWTVGRDKKAEKRKRIAWGVLQGALGAIATMGARRGVSRVWGVLTGEQPPAKR*
Ga0070663_1015021011	3300005455	Corn Rhizosphere	MGVKTEEKVRAAIARAGEGLTEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR*
Ga0070681_103373533	3300005458	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAQQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0070681_108872362	3300005458	Corn Rhizosphere	MAAKTEDRVRSAIARVGEEVSEKAWTVGRGAKTEKRKRLAWGVVQGVVGAVFTLAARRVGAKTWGVLTGEQPPTKKSP*
Ga0070698_1005339503	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKTEEKVRTAIARVGEGISEKAWTLGRDKKAERRKRLLWGLLQGTLGAAFTLAARRVGAKAWGVLTGEQPPAKT*
Ga0070741_1000930211	3300005529	Surface Soil	VKTEQKVRSAIARVGEELAEKAWTVGRDEKVERRKRLAWGVLQGATGAVATLAARRIGAKVWGILTGERPPAKK*
Ga0070741_100407662	3300005529	Surface Soil	MAVKTEEKVRSAIARVGEEIAEKAWTVGRDAKSERKKRLAWGALQGALGAVATVAARRAGAKVYGVLTGERPPTKK*
Ga0070741_101014813	3300005529	Surface Soil	MAVKTEDRVRSAIARVGEEISEKAWTVGRDPKAEKRKRLAWGILQGALGAGATIVARRVGSRAWGILTGEQPPAKR*
Ga0070741_102761602	3300005529	Surface Soil	MPGRYAGMAVKTEDKVRSAIARVGEGLSEKAWTVGRDPKAERRKRLAWGVLQGALGAVATLGARRAGAKAWGILTGEKPPTKK*
Ga0070739_1000014114	3300005532	Surface Soil	MAVKTEERARSAIARFGEEVAEKAWTVGRDPKAERRKRLVWGLLQGALGAVATIGARRLGARLWGVLTGEQPPARQ*
Ga0070739_101143743	3300005532	Surface Soil	MTVKLEDRVRGAIATVGEEITEAAWKVGRDPKAERRKRIQWGILQGAIGAVFTLGARRVGAKAWGILTGEQPPTKK*
Ga0070739_104420211	3300005532	Surface Soil	QKLEDRVRSAIATVGEEITELAWTVGRDAKAERRKRLLWGVVQGATGAVFTIPARRMGAKVWGILTGEQPPTKK*
Ga0068855_1008582222	3300005563	Corn Rhizosphere	AQLSSAAARCSVMAVKTEEKVRSGIARVGEGIAEKAWTVGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPVKR*
Ga0068855_1008718711	3300005563	Corn Rhizosphere	VAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPT
Ga0068855_1009232881	3300005563	Corn Rhizosphere	MAVHTEDRVRSAIARVGEEIQEKAWTIGRDRKAEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGILTGERPPTKR*
Ga0066903_1028389132	3300005764	Tropical Forest Soil	MTVKTQEKVRSAVARVGEELTERAWTVGRDPKTERKKLLAWGALQGTLGAVAALGARRVGSRVWGVLTGEQPPAKR*
Ga0075284_10121582	3300005885	Rice Paddy Soil	AVKTGERVRSAIARVGEEISEHAWTVGRDPKVERRKRVAWGLLQGALGAAATIAARKAGSRIWGILTGEQPPARR*
Ga0075282_10220732	3300005896	Rice Paddy Soil	MAVKTGERVRSAIARVGEEISEHAWTVGRDPKVERRKRVAWGLLQGALGAAATIAARKAGSRIWGILTGEQPPARR*
Ga0066651_103169922	3300006031	Soil	VTVKTQEKVRSAVARVGEELSEKAWTVGRDPKAVRKKRIYWGLLQAGFGALATLGARRIGVKLWGILTGEGAPPRR*
Ga0079222_103979912	3300006755	Agricultural Soil	VAVKTQEKVRSAVARVGEELTEKAWTLGRDPKTERKKRLAWGVLQTSMTAVATLAARRVGFRVWAILTGEPPPLPGQKR*
Ga0079222_104119143	3300006755	Agricultural Soil	MAVKVEDRVRSAIATVGEEIAEAAWKVGRDSNVERRKRIQWGILQGAIGAVFTLGARRIGAKAWGVLTGEQPPTKK*
Ga0066653_100510434	3300006791	Soil	VTVKTQEKVRSAVARVGEELSEKAWTVGRDPKAVRKKRIYWGLLQAGFGALATLGARRIGVKLWGVLTGEGAPPRR*
Ga0075434_1020497981	3300006871	Populus Rhizosphere	TQEKVRSAVARVGEELTEKAWTVGRDRKAERKKRLAWGALQGTFGVLATIAARRVGIKLWGVLTGERPPLPR*
Ga0079219_124253802	3300006954	Agricultural Soil	MSVKLEDRVRKGVAGVGEEIAEKAWTIGRDERDERKKRLLWGVLQGVIGAVFTLGARRVGAKVWGVLTGEQPPTKK*
Ga0105240_120613362	3300009093	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR*
Ga0066709_1010984792	3300009137	Grasslands Soil	MAVKTEERVRAAIARAGEELTEKAWTVGRDAKAEKRKRLAWGVLQGAVGAVFTLGARRAGAKAWGVLTGEQPPARK*
Ga0126318_101425362	3300010152	Soil	EKVRSAIARAGEELSEKAWTVGRDPGAERRKRLAWGILQGALGAAATIAGRRVGSRVWGILTGEQPPAKR*
Ga0126318_104320681	3300010152	Soil	EKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0126318_104682471	3300010152	Soil	QKLRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLLQGALGAVFTIAARRAVARAWGVLTGEQPPTKR*
Ga0126318_109041791	3300010152	Soil	EKVRSAIARAGEELSEKAWTVGRDAKSQKRKRLAWGVVQGAIGAVFTLAARRAGAKAWGVLTGEAPPTKK*
Ga0134128_108428671	3300010373	Terrestrial Soil	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTG
Ga0134126_118408361	3300010396	Terrestrial Soil	EKVRSGIARVGEGIAEKAWTVGRDKKAEQRQRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0134126_128138202	3300010396	Terrestrial Soil	WSAQLSSAAARCSHVAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0137374_100749562	3300012204	Vadose Zone Soil	MALKTDQKVRTAIARVGDGISERAWTLGRDKKAERRKRLLWGLLQGALGAAFTLAARRVGAKAWGVLTGEQPPAKT*
Ga0150985_1063805022	3300012212	Avena Fatua Rhizosphere	QRMGVKLEERVRSAVATVGEGITEKAWTLGRDSKTERKKRLAWGALHGAIAAVFTLAARRIGAKAWGVLTGERPPTKK*
Ga0150985_1089572062	3300012212	Avena Fatua Rhizosphere	EDRVRAAIARAGEELTEKAWTVGRDAKAEKRKRLAWGVVQGVVGAAFTLGARRVGAKAWGVLTGEQPPGRK*
Ga0150985_1124606131	3300012212	Avena Fatua Rhizosphere	EDRVRSAIARAGEELSEKAWTVGRDAKAEKRKRMAWGVVQAAIGAVFTLAARRAGAKAWGILTGERPPTKR*
Ga0150985_1178457571	3300012212	Avena Fatua Rhizosphere	MAVKTEDKMRSAIARVGDGLSEKAWTLGRDAKAEKRKRIAWGVLQGALGAIATIGARRGVARVWGGLTGEQPP
Ga0150985_1200799252	3300012212	Avena Fatua Rhizosphere	FRSDRVRAVIARAGEELTEKAWTLGRDAKAEKRKRMAWGVVQGVVGAVFTLAARRVGAKAWGVLTGEQPPTKK*
Ga0150984_1037598472	3300012469	Avena Fatua Rhizosphere	AGNPLGFTGVAHAVGVKTEEKVRSAIARVGEELSEKAWTVGRDAKAEKRKRIAWGVLQGALGAVATIGARRGVSRVWGVLTGEQPPARR*
Ga0150984_1077088121	3300012469	Avena Fatua Rhizosphere	MAVKTEDRVRSVLARAGEELSEKAWTIGRDKKAEQRKRLVWGIVQGAVGAAFTIGSRRIVAKAWGVLTGERPPTKR*
Ga0150984_1110068672	3300012469	Avena Fatua Rhizosphere	MAVKTEDKMRSAIARVGDGLSEKAWTLGRDAKAEKRKRIAWGVLQGALGAIATIGARRGVSRVWGVLTGEQPPARR*
Ga0150984_1120327551	3300012469	Avena Fatua Rhizosphere	MAVKTEEKVRSAIARVGEGITEKAWTVGRDAKAEKRKRLAWGVVQGVVGAAFTLGARRVGAKAWGVLTGEQPPGRK*
Ga0150984_1139614052	3300012469	Avena Fatua Rhizosphere	TTEERVRAAIARAGEELTEKAWTVGRDPKAEKRKRIAWGVVQGVVGAAFTIGARRVGAKAWGVLTGEQPPTKKKAIRFKTR*
Ga0150984_1157728551	3300012469	Avena Fatua Rhizosphere	TEDRVRAVIARAGEELTEKAWTLGRDAKAEKRKRMAWGVVQGVVGAVFTLAARRVGAKAWGVLTGEQPPTKK*
Ga0150984_1184291681	3300012469	Avena Fatua Rhizosphere	RRQRMGVKLEERVRSAVATVGEGITEKAWTLGRDSKTERKKRLAWGALHGAIAAVFTLAARRIGAKAWGVLTGERPPTKK*
Ga0164301_106358702	3300012960	Soil	MAVKTEDKVRSAIARVGDGLSQKAWTVGRDKKAEKRKRIAWGVLQGALGAIATMGARRGVSRVWGVLTGEQPPTKR*
Ga0164308_102338913	3300012985	Soil	MAVKTEDKVRSAIARVGEELSEKAWTVGRDKKAEKRKRVAWGVLQGALGAIATMGARRVVSRVWGVLTGEQPPTKR*
Ga0157371_110914301	3300013102	Corn Rhizosphere	VAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGIVGAVFTIAARRAVAKVWGVLTGE
Ga0157369_100163803	3300013105	Corn Rhizosphere	AAARCSHMAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAQQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK*
Ga0157369_101230872	3300013105	Corn Rhizosphere	VAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTNK*
Ga0157369_108617581	3300013105	Corn Rhizosphere	MAVKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKT
Ga0157369_117418802	3300013105	Corn Rhizosphere	MAVKTEEKVRSAIARVGEGLSEKAWTVGRDPKTEKRKRVAWAVLQGALGAVATIGARRVVSRVWGVLTGEQPPTR*
Ga0134079_101850661	3300014166	Grasslands Soil	MAVKTEERVRSVIARAGEELTEKAWTLGRDTKAEKRKRLAWGVVQGVVGAVFTLGARRAGAKAWGVLTGDRPPTKK*
Ga0182008_108301301	3300014497	Rhizosphere	MAVKTEERIRSAIARAGEELTEKAWTVGRDAKTEKRKRFAWGLVQGVIGAVFTVAARRVGAKAWGVLTGEQPPTKKL*
Ga0132258_134295683	3300015371	Arabidopsis Rhizosphere	MAVKTEEKVRSAIARVGEGLTEKAWTVGRDAKTEKRKRIAWGLLQGALGALAAIGARRAVSHAWGVLTGEQPPA
Ga0187825_102906492	3300017930	Freshwater Sediment	VDAIRSGIARIGDGIAEKAWTVGRDEKAERKKRIAWGVVQASTGAVFTLVARRLGAKAWGVLTGEQPPGRR
Ga0066655_104320752	3300018431	Grasslands Soil	VKTQEKVRSAVAHFGEGLSETAWTIGRDPKAERRKRLAWGALQGAFGVLATVAARRTGARLWGVLTGERPPVKR
Ga0066662_113244362	3300018468	Grasslands Soil	MPLKTEERVRSAIAQVGEGISEKAWSLGRDKKTERKKRLAWGALQGAIGAVFTLAGRRAVTKAWGVLTGEQPPTKKI
Ga0197907_102591362	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	EEKVRAAIARAGEGLTEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0197907_109100561	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAAKTEDRVRSAIARVGEEVSEKAWTVGRGAKTEKRKRLAWGVVQGVVGAVFTLAARRVGAKTWG
Ga0197907_113370672	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0197907_114520151	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	EEKVRSGIARVGEGIAEKAWTVGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPVKR
Ga0206356_106154282	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MGVKTEEKVRAAIARAGEGLTEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0206355_13053841	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	AQLSSAAARCSHVAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0206351_106190192	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	TEEKVRAAIARAGEGLTEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0206350_103244641	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0206350_116019571	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	KTEEKVRAAIARAGEGLTEKAWTVGRDKKAEQRKRIAWGIVQGVIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0206354_111470542	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VAVKTEEKVRSGIAWVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0206353_100516662	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKTEEKVRAAIARAGEELSEKAWTVGRDKKAEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGVLTGERPPTRR
Ga0206353_101120501	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	AIARAGEGISSKAWTVGRDAKAEKRKRMAWGLVQGVIGAVFTLAARRIGAKAWGILTGERPPTKR
Ga0182009_107705132	3300021445	Soil	IARAGEGLTEKAWTVGRDPKTEKRKRFAWGLVQGVIGAVFTLGARRVGAKAWGVLTGEQPPTKK
Ga0224712_101280281	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EEKVRSGIARVGEEIAEKAWTVGRDKKAQQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0224712_103939452	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VRSAIARAGEEISEKAWTVGRDKKAEQRKRLAWGVVQGVIGAVFTVGARRIGAKAWGVLTGERPPTKR
Ga0224712_104743402	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EEKVRAAIARAGEELSEKAWTVGRDKKAEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGILTGERPPTKR
Ga0224712_105681241	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	EKVRSGIARVGEGIAEKAWTVGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPVKR
Ga0207692_111287072	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VNAIRGGIARVGGGIAEEAWTLGRNEKAERKKRIVWGILQGAIGAVFTLGARRAGAKAWGVLTGERPPARK
Ga0207705_100784732	3300025909	Corn Rhizosphere	MAAKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKTK
Ga0207705_101207722	3300025909	Corn Rhizosphere	MAAKTEDRVRSAIARVGEEVSEKAWTVGRDAKTEKRKRLAWGVVQGVVGAVFTLAARRVGAKTWGVLTGEQPPTKKSP
Ga0207705_101382112	3300025909	Corn Rhizosphere	MSAKTEERVRSAIARAGEEISEKAWTVGRDKKAEQRKRLAWGVVQGVIGAVFTVGARRIGAKAWGVLTGERPPTKR
Ga0207707_102560383	3300025912	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAQQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQP
Ga0207663_104086312	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAVKTEDKVRSAIARVGDGLSEKAWTVGRDKKAEKRKRIAWGVLQGALGAIATMGARRGVSRVWGVLTGEQPPAKR
Ga0207660_103925542	3300025917	Corn Rhizosphere	MAVKTEEKVRAAIARAGEELSEKAWTVGRDKKAEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGILTGERPPTKR
Ga0207649_112170151	3300025920	Corn Rhizosphere	GRCSHMAVKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKTK
Ga0207652_109943981	3300025921	Corn Rhizosphere	RGMAAKTEDRVRSAIARVGEEVSEKAWTVGRDAKTEKRKRLAWGVVQGVVGAVFTLAARRVGAKTWGVLTGEQPPTKKSP
Ga0207664_103565641	3300025929	Agricultural Soil	MAVKTEEKVRSGIARVGEGIAEKAWTVGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPVKR
Ga0207664_104702552	3300025929	Agricultural Soil	MAVKTEEKVRSAIARVGEGITEKAWTVGRDAKAERKKRLAWGVLQGALGAAATIVARRAGAKLYGVLTGERPPTKK
Ga0207664_105435232	3300025929	Agricultural Soil	MAVKTEEKVRSGIARLGEEIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKAWGVLTGEQPPTKTK
Ga0207664_106773712	3300025929	Agricultural Soil	AGRCRPVDAIRSGIARIGDGIAEKAWTVGRDEKAERKKRIAWGVVQGSIGAVFTLVARRLGAKAWGVLTGEQPPGRR
Ga0207664_110821592	3300025929	Agricultural Soil	MALKTEERVRSAIAQVGEGISEKAWSLGRDKKAERKKRLAWGALQGAVGAVFTLAGRRLVAKAWGVLTGEQPPSKKI
Ga0207640_120909542	3300025981	Corn Rhizosphere	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAQQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0207698_102258072	3300026142	Corn Rhizosphere	MAVKTEEKVRAAIARAGEELSEKAWTVGRDKKAEQRKRLAWGLVQGVVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0209474_105943581	3300026550	Soil	EGLSEKAWTIGRDPKTERRKRLAWGALQGAFGVLATVAARRTGARLWGVLTGERPPVKR
Ga0209810_1000007709	3300027773	Surface Soil	MAVKTEERARSAIARFGEEVAEKAWTVGRDPKAERRKRLVWGLLQGALGAVATIGARRLGARLWGVLTGEQPPARQ
Ga0209810_10413823	3300027773	Surface Soil	MTVKLEDRVRGAIATVGEEITEAAWKVGRDPKAERRKRIQWGILQGAIGAVFTLGARRVGAKAWGILTGEQPPTKK
Ga0307310_105745862	3300028824	Soil	MAVKTDQKVRTAIARVGDGISEKAWTLGRDKKAERRKRLLWGLLQGAVGAAFTLAARRVGARAWGVLTGEQPPAKK
Ga0268244_107530271	3300030501	Agave	AQLSSAAGRCSHMAAKTEEKVRSGIARLGEGIAEKAWTVGRDAKVEKRKRLAWGLLQGALGAAFTVVARRAGAKTWGVLTGEQPPTKTK
Ga0308175_1002067513	3300031938	Soil	VNAIRSGIARVGEEIAEKAWTVGRDNRAERKKRIVWGVVQGSIGAVFTLAARRAGTKAWGVLTGEQPPGRR
Ga0308175_1006605242	3300031938	Soil	MAVKTEEKVRAAIARAGEELAEKAWTVGRDKKTEQRKRIAWGIVQGAIGAVFTLGARRVGAKAWGILTGERPPTKR
Ga0308175_1007169242	3300031938	Soil	MAVKTEDRVRSAIARAGEELSERAWTVGRDTKTVKRKRLAWGIVQGIVGAAFTIGARRLGAKAWGVL
Ga0308175_1010424392	3300031938	Soil	SSSAQLSSAAVRCSDMAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0308175_1011234272	3300031938	Soil	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTRK
Ga0308175_1016420332	3300031938	Soil	MAVKTEDRVRSAIARAGEELSEKAWTLGRDPKTEKRKRVAWGVVQGVIGAVFTLAARRVGAKAWGVLTGERPPTKK
Ga0308175_1024242481	3300031938	Soil	VRSGIARVGEEIAEKAWTLGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVANVWGVLTGEQPPTKR
Ga0308175_1025571962	3300031938	Soil	TEEKVRSAIARAGEGLTEKAWTVGRDPKTEKRKRLAWGLVQGVVGAVFTLGARRVGAKAWGVLTGERPPTKK
Ga0308176_100562662	3300031996	Soil	MAVKAQEKVRSAIARAGEGLTEKAWTVGRDPKTEKRKRLAWGLVQGVVGAVFTLGARRVGAKAWGVLTGERPPTKR
Ga0308176_101302023	3300031996	Soil	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKRTEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0308176_106389202	3300031996	Soil	MAVKTEDRVRSAIARAGEELSERAWTVGRDTKTVKRKRLAWGIVQGIVGAAFTIGARRLGAKAWGVLTGERPPTKR
Ga0308176_108562322	3300031996	Soil	MAVKTEEKVRSGIARVGEEIAEKAWTLGRDKKAEQRKRLAWGIVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0308173_111392892	3300032074	Soil	MAVKTEEKVRSGIARVGEEIAEKAWTVGRDKKAEQRKRLAWGLVQGAVGAVFTIAARRAVAKVWGVLTGEQPPTKK
Ga0308173_122069721	3300032074	Soil	MAVKTEDRVRAVIARAGEELTEKAWTLGRDAKAEKRKRLAWGVVQGVIGAVFTLAARRVGAKAWGVLTGEQPPTKK
Ga0372943_0230933_876_1106	3300034268	Soil	MAVKTEQKVRSAIARVGDGLSEKAWTVGRDPKTERKKRLAWGVLQGALGAVATLGARRAVGHLWGVLTGERPPTKR
Ga0372946_0068807_34_264	3300034384	Soil	MAVKTDQRLRTAIARVGEGISEKAWTLGRDKKAERKKRLLWGLLQGVLGAAFTLAARRVGAKAWGVLTGERPPAKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences