Metagenome / Metatranscriptome Family F046971

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046971
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	52 residues
Representative Sequence	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLNSKQSAR
Number of Associated Samples	104
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.33 %
% of genes near scaffold ends (potentially truncated)	29.33 %
% of genes from short scaffolds (< 2000 bps)	80.67 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (20.667 % of family members)
Environment Ontology (ENVO)	Unclassified (36.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.71% β-sheet: 2.53% Coil/Unstructured: 60.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00072	Response_reg	14.67
PF04392	ABC_sub_bind	3.33
PF13683	rve_3	2.00
PF13278	Obsolete Pfam Family	1.33
PF01566	Nramp	1.33
PF01527	HTH_Tnp_1	1.33
PF08238	Sel1	0.67
PF11066	DUF2867	0.67
PF13489	Methyltransf_23	0.67
PF12680	SnoaL_2	0.67
PF00903	Glyoxalase	0.67
PF00027	cNMP_binding	0.67
PF07238	PilZ	0.67
PF02954	HTH_8	0.67
PF10711	DUF2513	0.67
PF07589	PEP-CTERM	0.67
PF13560	HTH_31	0.67
PF01965	DJ-1_PfpI	0.67
PF08241	Methyltransf_11	0.67
PF01070	FMN_dh	0.67
PF12973	Cupin_7	0.67
PF13495	Phage_int_SAM_4	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.33
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	1.33
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.67
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
All Organisms	root	All Organisms	45.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
cellular organisms	root	All Organisms → cellular organisms	44.67 %
Viruses	superkingdom	All Organisms → Viruses	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.33 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	11.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.67 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	3.33 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	11.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.33 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	3.33 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	10.67 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	3.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.33 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.67 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	9.33 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.33 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.67 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.33 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.33 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.67 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.33 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.67 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.67 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.33 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.33 %
Sphingomonas sp. dw_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	0.67 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.67 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_5361_length_979_cov_7.824310	Not Available	1011	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2086645	Not Available	1054	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101587578	Not Available	966	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101588675	Not Available	1179	Open in IMG/M
3300000550\|F24TB_10207288	Not Available	2852	Open in IMG/M
3300000559\|F14TC_101217527	Not Available	1060	Open in IMG/M
3300003324\|soilH2_10318257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2325	Open in IMG/M
3300004156\|Ga0062589_100250736	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300004643\|Ga0062591_100183981	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005331\|Ga0070670_102034329	Not Available	529	Open in IMG/M
3300005406\|Ga0070703_10022096	Not Available	1864	Open in IMG/M
3300005406\|Ga0070703_10046630	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005440\|Ga0070705_100360745	Not Available	1063	Open in IMG/M
3300005444\|Ga0070694_101471147	Not Available	576	Open in IMG/M
3300005444\|Ga0070694_101673880	Not Available	541	Open in IMG/M
3300005445\|Ga0070708_100045831	All Organisms → cellular organisms → Bacteria → Proteobacteria	3855	Open in IMG/M
3300005445\|Ga0070708_100129845	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300005445\|Ga0070708_100139838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2245	Open in IMG/M
3300005445\|Ga0070708_100329121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1439	Open in IMG/M
3300005445\|Ga0070708_100417377	Not Available	1265	Open in IMG/M
3300005445\|Ga0070708_102230854	Not Available	505	Open in IMG/M
3300005445\|Ga0070708_102263284	Not Available	501	Open in IMG/M
3300005467\|Ga0070706_100151400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2165	Open in IMG/M
3300005467\|Ga0070706_100229886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1731	Open in IMG/M
3300005467\|Ga0070706_100549260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M
3300005467\|Ga0070706_101903854	Not Available	539	Open in IMG/M
3300005467\|Ga0070706_102070311	Not Available	515	Open in IMG/M
3300005468\|Ga0070707_101586050	Not Available	621	Open in IMG/M
3300005471\|Ga0070698_100034362	All Organisms → cellular organisms → Bacteria	5248	Open in IMG/M
3300005471\|Ga0070698_100160456	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300005536\|Ga0070697_100297378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1387	Open in IMG/M
3300005545\|Ga0070695_100305845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1177	Open in IMG/M
3300005577\|Ga0068857_100145853	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2142	Open in IMG/M
3300005577\|Ga0068857_101023647	Not Available	795	Open in IMG/M
3300005617\|Ga0068859_101157584	Not Available	851	Open in IMG/M
3300006755\|Ga0079222_10203071	Not Available	1194	Open in IMG/M
3300006755\|Ga0079222_11099510	Not Available	698	Open in IMG/M
3300006806\|Ga0079220_10138995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1323	Open in IMG/M
3300006806\|Ga0079220_10362012	Not Available	928	Open in IMG/M
3300006852\|Ga0075433_11792659	Not Available	528	Open in IMG/M
3300007255\|Ga0099791_10214056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	910	Open in IMG/M
3300007788\|Ga0099795_10531129	Not Available	552	Open in IMG/M
3300009038\|Ga0099829_10052511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3025	Open in IMG/M
3300009038\|Ga0099829_10076689	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300009038\|Ga0099829_10098144	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2274	Open in IMG/M
3300009038\|Ga0099829_10293879	Not Available	1331	Open in IMG/M
3300009038\|Ga0099829_10912266	Not Available	729	Open in IMG/M
3300009089\|Ga0099828_10024931	All Organisms → cellular organisms → Bacteria	4736	Open in IMG/M
3300009089\|Ga0099828_10249540	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1591	Open in IMG/M
3300009090\|Ga0099827_10972143	Not Available	736	Open in IMG/M
3300009143\|Ga0099792_10580397	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
3300009156\|Ga0111538_12031889	Not Available	723	Open in IMG/M
3300009162\|Ga0075423_13059131	Not Available	512	Open in IMG/M
3300011003\|Ga0138514_100027037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1066	Open in IMG/M
3300011269\|Ga0137392_10201294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1628	Open in IMG/M
3300011270\|Ga0137391_10226279	Not Available	1624	Open in IMG/M
3300011271\|Ga0137393_10432733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300012189\|Ga0137388_11547096	Not Available	600	Open in IMG/M
3300012355\|Ga0137369_10454930	Not Available	913	Open in IMG/M
3300012355\|Ga0137369_10637537	Not Available	738	Open in IMG/M
3300012358\|Ga0137368_10944309	Not Available	522	Open in IMG/M
3300012360\|Ga0137375_10237632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1693	Open in IMG/M
3300012362\|Ga0137361_10728937	Not Available	904	Open in IMG/M
3300012363\|Ga0137390_10162495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2221	Open in IMG/M
3300012582\|Ga0137358_10948515	Not Available	561	Open in IMG/M
3300012582\|Ga0137358_11119234	Not Available	500	Open in IMG/M
3300012922\|Ga0137394_10190974	Not Available	1748	Open in IMG/M
3300012938\|Ga0162651_100052076	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300012944\|Ga0137410_10218135	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1484	Open in IMG/M
3300012957\|Ga0164303_10013376	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300014326\|Ga0157380_11236244	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300017936\|Ga0187821_10213889	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300017997\|Ga0184610_1037824	Not Available	1382	Open in IMG/M
3300018027\|Ga0184605_10222670	Not Available	857	Open in IMG/M
3300018027\|Ga0184605_10483629	Not Available	541	Open in IMG/M
3300018052\|Ga0184638_1120083	Not Available	960	Open in IMG/M
3300018054\|Ga0184621_10227843	Not Available	667	Open in IMG/M
3300018061\|Ga0184619_10232850	Not Available	847	Open in IMG/M
3300018061\|Ga0184619_10282195	Not Available	762	Open in IMG/M
3300018061\|Ga0184619_10341523	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300018066\|Ga0184617_1104327	Not Available	795	Open in IMG/M
3300018071\|Ga0184618_10170931	Not Available	898	Open in IMG/M
3300018071\|Ga0184618_10224128	Not Available	791	Open in IMG/M
3300018076\|Ga0184609_10000474	All Organisms → cellular organisms → Bacteria	11690	Open in IMG/M
3300018076\|Ga0184609_10069285	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300018076\|Ga0184609_10144475	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300018078\|Ga0184612_10033661	Not Available	2652	Open in IMG/M
3300018078\|Ga0184612_10069837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1832	Open in IMG/M
3300018078\|Ga0184612_10150196	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300018429\|Ga0190272_10211486	Not Available	1414	Open in IMG/M
3300019877\|Ga0193722_1071517	Not Available	860	Open in IMG/M
3300019879\|Ga0193723_1011101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2875	Open in IMG/M
3300019881\|Ga0193707_1056619	Not Available	1239	Open in IMG/M
3300019881\|Ga0193707_1199309	Not Available	512	Open in IMG/M
3300019886\|Ga0193727_1073832	Not Available	1048	Open in IMG/M
3300019999\|Ga0193718_1071452	Not Available	741	Open in IMG/M
3300020003\|Ga0193739_1134701	Not Available	604	Open in IMG/M
3300020004\|Ga0193755_1068502	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300020006\|Ga0193735_1096429	Not Available	829	Open in IMG/M
3300020018\|Ga0193721_1015107	Not Available	2034	Open in IMG/M
3300020022\|Ga0193733_1092493	Not Available	846	Open in IMG/M
3300020022\|Ga0193733_1099869	Not Available	810	Open in IMG/M
3300021080\|Ga0210382_10360526	Not Available	642	Open in IMG/M
3300021178\|Ga0210408_10648118	Not Available	834	Open in IMG/M
3300021344\|Ga0193719_10060750	All Organisms → Viruses → Predicted Viral	1639	Open in IMG/M
3300022694\|Ga0222623_10070860	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300025885\|Ga0207653_10066286	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300025885\|Ga0207653_10203004	All Organisms → cellular organisms → Bacteria → Terrabacteria group	748	Open in IMG/M
3300025910\|Ga0207684_10001033	All Organisms → cellular organisms → Bacteria	31207	Open in IMG/M
3300025910\|Ga0207684_10006728	All Organisms → cellular organisms → Bacteria	10439	Open in IMG/M
3300025910\|Ga0207684_10028890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4723	Open in IMG/M
3300025910\|Ga0207684_10307615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300025910\|Ga0207684_10317680	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300025910\|Ga0207684_10479546	Not Available	1067	Open in IMG/M
3300025922\|Ga0207646_10932024	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300025927\|Ga0207687_10522495	All Organisms → cellular organisms → Bacteria → Terrabacteria group	993	Open in IMG/M
3300025942\|Ga0207689_10035420	All Organisms → cellular organisms → Bacteria → Proteobacteria	4147	Open in IMG/M
3300026116\|Ga0207674_10325375	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300026351\|Ga0257170_1002347	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300026351\|Ga0257170_1018999	Not Available	894	Open in IMG/M
3300026354\|Ga0257180_1028732	Not Available	748	Open in IMG/M
3300026356\|Ga0257150_1015387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1058	Open in IMG/M
3300026358\|Ga0257166_1024700	Not Available	806	Open in IMG/M
3300026371\|Ga0257179_1005908	Not Available	1159	Open in IMG/M
3300026371\|Ga0257179_1056415	Not Available	517	Open in IMG/M
3300026377\|Ga0257171_1053954	Not Available	698	Open in IMG/M
3300026446\|Ga0257178_1054912	Not Available	525	Open in IMG/M
3300026469\|Ga0257169_1000953	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2255	Open in IMG/M
3300026499\|Ga0257181_1001571	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300026507\|Ga0257165_1098784	Not Available	541	Open in IMG/M
3300026514\|Ga0257168_1002761	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2646	Open in IMG/M
3300026535\|Ga0256867_10351465	Not Available	514	Open in IMG/M
3300026551\|Ga0209648_10018788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6040	Open in IMG/M
3300027645\|Ga0209117_1133832	Not Available	656	Open in IMG/M
3300027862\|Ga0209701_10668145	Not Available	540	Open in IMG/M
3300027882\|Ga0209590_10886341	Not Available	562	Open in IMG/M
3300028673\|Ga0257175_1013840	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1265	Open in IMG/M
3300028715\|Ga0307313_10067375	Not Available	1066	Open in IMG/M
3300028807\|Ga0307305_10295908	Not Available	737	Open in IMG/M
3300028807\|Ga0307305_10449238	Not Available	580	Open in IMG/M
3300028828\|Ga0307312_10375295	Not Available	932	Open in IMG/M
3300028828\|Ga0307312_10572252	Not Available	747	Open in IMG/M
3300030006\|Ga0299907_11223171	Not Available	538	Open in IMG/M
3300030990\|Ga0308178_1086788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300031229\|Ga0299913_10355452	Not Available	1453	Open in IMG/M
3300032180\|Ga0307471_100407507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1489	Open in IMG/M
3300032180\|Ga0307471_101398830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	860	Open in IMG/M
3300032205\|Ga0307472_100388690	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300033412\|Ga0310810_10001382	All Organisms → cellular organisms → Bacteria	25433	Open in IMG/M
3300033412\|Ga0310810_10001877	All Organisms → cellular organisms → Bacteria	22291	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.67%
Host-Associated	Host-Associated	7.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.33%
Aquatic	Environmental → Aquatic	13.33%
Plants	Host-Associated → Plants	7.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.00%
Sediment	Environmental → Aquatic → Sediment	12.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.33%
Freshwater	Environmental → Aquatic → Freshwater	1.33%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.33%
Loam	Environmental → Terrestrial → Soil → Loam	22.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.33%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.67%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	20.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.33%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00687590	2140918013	Soil	MPCIRCGKITVKLCTCSFDDAKKALSAWSSVELKQALTMLKAVLDSKTKQH
ICChiseqgaiiDRAFT_20866452	3300000033	Soil	MPCIRCGKITVKLCTCSFDDAKKALSAWSSVELKQALTMLKAVLDSKTKQH*
INPhiseqgaiiFebDRAFT_1015875781	3300000364	Soil	MPCIRCGKITVKLCTCSIPEAKEAFSAWSEVELEQIINMLRTVLKSRQSAS*
INPhiseqgaiiFebDRAFT_1015886753	3300000364	Soil	MPCIRCGKITVKLCTCSILEAKEAFSAWSEVELEQVINMLRMVLKSKQSAS*
F24TB_102072881	3300000550	Soil	MPCIRCGKITVKLCTCSILEAKEAFSTWSEVELEQVINMLRMVLKSKQSAS*
F14TC_1012175273	3300000559	Soil	MPCIRCGKITVKLCTCSILEVKEAFSAWSEVELEQVINMLRTVLKSKQSAS*
soilH2_103182574	3300003324	Sugarcane Root And Bulk Soil	MPCIRCGKITVKWCTCSIEEASDAFSAWSEVELEQAIRTLKAVLDSKQSARNRGARETGRQPHER*
Ga0062589_1002507362	3300004156	Soil	MPCIRCGKVTVKLCTCSIEEAKEAFSAWSEDELERAISTLRTVVNSLKARNDVE*
Ga0062591_1001839812	3300004643	Soil	MPCIRCGKVTVKLCTCSIEEAKEAFSAWSEDELERAISTLTTVVNSLKARNDVE*
Ga0070670_1020343291	3300005331	Switchgrass Rhizosphere	MPCIRCGRITVKLCTCSIDAAREALSAWSEDELQTAINTLKAVL
Ga0070703_100220964	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTLRELLEAKRSARWRRDIPN*
Ga0070703_100466303	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDTLSAWSDVELEQAISMLREVLEAKRRASSSRERTELRR*
Ga0070705_1003607451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTLRELLEAKRSARWRRDIPN*
Ga0070694_1014711471	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TVKLCTCSIEEAKEAFSAWSEVELEEAVKTLREVLEAKRSARWRRDIPK*
Ga0070694_1016738801	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDTLSAWSDVELEQAISMMREVLEAKRRASSSRERTELRR*
Ga0070708_1000458317	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKTTVKLCTCSIEEAKEALSAWSEVELERAINTLKTVLDSKQSTH*
Ga0070708_1001298452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIPCGKITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLASKQNAH*
Ga0070708_1001398385	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELERAISTLRTVLDSKQSAR*
Ga0070708_1003291211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGRITVKLCTCSIEQARDAFSAWSEVELEQAINTLRTVLESKRSIRWRRDMPN*
Ga0070708_1004173772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTLREVLEAKRSARWRRDIPN*
Ga0070708_1022308541	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TCSIEQAKEAFSAWSEVELEQAINTLSTVLESERSARWRRDMPN*
Ga0070708_1022632842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDTLSAWSDVELEQAISMMREVLEAKRRASSSRERTEL
Ga0070706_1001514001	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLASKRNAH*
Ga0070706_1002298864	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGRITVKLCTCSIEQARDAFSAWSEVEIEQAINTLRTVLESKRSIRWRRDMPN*
Ga0070706_1005492603	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VMPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELERAISTLKTLLNSKRRAHSKRDTS*
Ga0070706_1019038543	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IEEAKEAFSAWSEVELEEAVKTLRELLEAKRSARWRRDIPN*
Ga0070706_1020703111	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEATEAFSAWSEVELKKAINTLKRVLDSKQSAH*
Ga0070707_1015860502	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDAFSAWSEVELEQAINTLSTVLESKRSARWRRDMPN*
Ga0070698_1000343621	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLAS
Ga0070698_1001604566	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGRITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLASKQNAH*
Ga0070697_1002973782	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELERAISTLKTLLNSKRRAHSKRDTS*
Ga0070695_1003058452	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKVTVKLCTCAIEEAKEAFSAWSEDELERAISTLRTVVNSLKARNDVE*
Ga0068857_1001458531	3300005577	Corn Rhizosphere	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVDLERAISTLRTVLDSKQNAQSKRDTP*
Ga0068857_1010236471	3300005577	Corn Rhizosphere	MPCIRCGRITVKLCTCSIDAAREALSAWSEDELQTAINTLKAVLDS
Ga0068859_1011575841	3300005617	Switchgrass Rhizosphere	MPCIRCGKVTVKLCTCAIEEAKEAFSAWSEDELERAISTLRT
Ga0079222_102030712	3300006755	Agricultural Soil	MPCIRCGKITAKLCTCSINQAKEAFSTWSEVEIEQAIDMLREILQAKRSSRRRMN*
Ga0079222_110995101	3300006755	Agricultural Soil	MPCIRCGKITVKWCTCSIGEAKEAFSAWSEVELRQAINTLK
Ga0079220_101389952	3300006806	Agricultural Soil	MPCIRCGKITAKLCTCSIEQAKDAFSTWTEVELEQAISTLRKVLESKRSTR*
Ga0079220_103620121	3300006806	Agricultural Soil	LTMEVAMPCIRCGKITAKLCTCSINQAKEAFSTWSEVEIEQAIDMLREILQAKRSSGRRTN*
Ga0075433_117926591	3300006852	Populus Rhizosphere	MPCIRCGNITVKLCTCSIDGAKQALSTWSEAELNQAINTLRAVLD
Ga0099791_102140561	3300007255	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELKQAINTLKTVLDSKQRAH*
Ga0099795_105311291	3300007788	Vadose Zone Soil	TVKLCTCSIEEATEAFSAWSEVELKKAINTLKRVLDSKQSAH*
Ga0099829_100525115	3300009038	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARWRRDMPN*
Ga0099829_100766891	3300009038	Vadose Zone Soil	IRCGKITVKLCACSIEEAKEAFSAWSEAELEQIISTLETVLESKRSARER*
Ga0099829_100981444	3300009038	Vadose Zone Soil	MPCIRCGKLTVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN*
Ga0099829_102938792	3300009038	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELKQAINTLNTVLDSKQRAH*
Ga0099829_109122662	3300009038	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRAVLDSKQSAR*
Ga0099828_100249318	3300009089	Vadose Zone Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEAELEQIISTLETVLESKRSARER*
Ga0099828_102495404	3300009089	Vadose Zone Soil	MPCIRCGKLTVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRQAMPN*
Ga0099827_109721433	3300009090	Vadose Zone Soil	VPGKRGGRITVKLCTCSIEQVKDAFSAWSEVELEQAINTLRKVLESKRSARWRD*
Ga0099792_105803971	3300009143	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKDASSAWSEVELKQAINTLKTVLDSKQRAH*
Ga0111538_120318891	3300009156	Populus Rhizosphere	MPCIRCGKITVKLCTRSILEAKEAFSAWSEVELEQVIKMLRMVLKSK*
Ga0075423_130591312	3300009162	Populus Rhizosphere	NVMPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVIKMLRMVLKSK*
Ga0138514_1000270371	3300011003	Soil	MPCIRCGKITVKLCTCSVEEARKAFSAWSEIELERAINTLK
Ga0137392_102012943	3300011269	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELKQAINTLKTVLDSKQGAH*
Ga0137391_102262792	3300011270	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELKKAINTLKTVLDSKQSGH*
Ga0137393_104327334	3300011271	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRAVLDS
Ga0137388_115470962	3300012189	Vadose Zone Soil	MPCIRCGRITVKLCTCSIEQVKDAFSAWSEVELEQAINTLRKVLESKRS
Ga0137369_104549301	3300012355	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELERAISTLRTVLNSLKARHAVD*
Ga0137369_106375373	3300012355	Vadose Zone Soil	KLRTYSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN*
Ga0137368_109443091	3300012358	Vadose Zone Soil	MPCVRCGKLTVKLRTYSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN*
Ga0137375_102376323	3300012360	Vadose Zone Soil	MPCIRCGKWTVKLCTCSIEEAKEAFSAWSEVELERAISTLRTVLNSLKARHAVD*
Ga0137361_107289371	3300012362	Vadose Zone Soil	KITVKLCTCSIEEAKDAFSAWSEVELKQAINTLNTVLDSKQRAH*
Ga0137390_101624953	3300012363	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSACSEVELEQVISTLRAVLDSKQSAR*
Ga0137358_109485152	3300012582	Vadose Zone Soil	MPCIRCGKITVKWCTCSIDEAKDAFSTWSEVELKHAINTLKAVLDSKQSTH*
Ga0137358_111192342	3300012582	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELQQAINTLKGVLGSKETEARGVLGM
Ga0137394_101909741	3300012922	Vadose Zone Soil	MPCIRCGRVTVKLCTCSIEQAKGAFSAWSEAELEEVVKTLREVLEAKRSAQGRRDIPN*
Ga0162651_1000520762	3300012938	Soil	MPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVVSMLRMVLDSKQSAH*
Ga0137410_102181351	3300012944	Vadose Zone Soil	MPCVRCGKLTVKLRTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN*
Ga0164303_100133766	3300012957	Soil	ITVKLCTCSIDGAKQALSTWSEAELNQAINTLRAVLDVKQKRQEA*
Ga0157380_112362442	3300014326	Switchgrass Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEDELERAISTLTTVVNSLKARNDVE*
Ga0187821_102138891	3300017936	Freshwater Sediment	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELKQAINTLKRVLASKQNAH
Ga0184610_10378242	3300017997	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARWRRDMPN
Ga0184605_102226703	3300018027	Groundwater Sediment	MPCIRCGKVTVKLCTCSIEEARHAFSAWSEAELEEAVKTLREVLEAKRSARWRRDIPN
Ga0184605_104836292	3300018027	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRMVLDSKQSAH
Ga0184638_11200832	3300018052	Groundwater Sediment	MPCIRCGKITLKLCTCSIEEAKEAFSAWSEVELERAINTLKRVLASKQNAH
Ga0184621_102278432	3300018054	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQIICTLETVLESKRSARER
Ga0184619_102328501	3300018061	Groundwater Sediment	MPCIRCGKWTVKLCTCSIEEAKEAFSAWSEVELERAISTLRTVLNSLKARHAVD
Ga0184619_102821952	3300018061	Groundwater Sediment	MPCIRCGRVTVKLCTCSIEQAKDAFSAWSEAELEEAVKTLREVLEAKRSAEGRRDIPN
Ga0184619_103415231	3300018061	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMV
Ga0184617_11043271	3300018066	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRMVLDSKQSAHWKRDTP
Ga0184618_101709311	3300018071	Groundwater Sediment	RCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMVLDSKQSAH
Ga0184618_102241281	3300018071	Groundwater Sediment	MPCIRCGRVTVKLCTCSIEQAKDAFSAWSEAELEEAVKTLREVLEAKRSAQGRRDIPN
Ga0184609_1000047410	3300018076	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLNSKQSAR
Ga0184609_100692851	3300018076	Groundwater Sediment	MPCIRCGKITVKLCTCSIEEVKDAFSAWSEAELEQIINTLETVLESKRSARER
Ga0184609_101444753	3300018076	Groundwater Sediment	MPCIRCGKITVKLCACSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARWRRDMPN
Ga0184612_100336613	3300018078	Groundwater Sediment	MPCIRCGKITLKWCTCSIEEAKEAFSAWSEVELKQAINTLKRVLASKQNAH
Ga0184612_100698374	3300018078	Groundwater Sediment	MPCIRCGKITVKLCTCPIEEAKEAFSAWSEVELEQPISTLRTVLDSKQSARWRRDMPN
Ga0184612_101501962	3300018078	Groundwater Sediment	MPCIRCGKVTVKLCTCSIEEARNSFSVWSEAELEQIISTLETVLESKRSARER
Ga0190272_102114863	3300018429	Soil	MPCIRCGKITVKLCTCSIEEVKHAFSAWSEAELEQIIYTLETVLESKRSARER
Ga0193722_10715173	3300019877	Soil	MPCIRCGKVTVKWCTCSIEEAKEAFSAWSEVELKQAINTLKRVLASKQNAH
Ga0193723_10111013	3300019879	Soil	MPCIRCGKITVKLCTCSIEEAKGTFSAWSEVELEQVISMLRMVLDSKQSAH
Ga0193707_10566192	3300019881	Soil	MPCIRCGRVTVKLCTCSIEQAKDAFSAWSEAELEEAVKTLREVLEAKRSARWRRDIPN
Ga0193707_11993092	3300019881	Soil	MPCIRCGRITVKLCTCSIEEAKEALSAWSEVELQQAINTLRMVLN
Ga0193727_10738321	3300019886	Soil	CIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMVLDAKQSAH
Ga0193718_10714522	3300019999	Soil	MPCIRCGKITVKWCTCSIKEATEAFSSWSVVELNQAINTLKRVLVSK
Ga0193739_11347011	3300020003	Soil	AHRGGFVMPCIRCGKVTVKLCTCSIEEVTNSFSAWSEAELEQIISTLETVLESKRSARER
Ga0193755_10685023	3300020004	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSTWSEVELERVISTLRMVLDSKQSAH
Ga0193735_10964292	3300020006	Soil	MPCIRCGKITVKLCTCSIEEAKAAFSAWSEVELERAISTLRTVLNSLKARNAVD
Ga0193721_10151076	3300020018	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRMVLDSKQSAHENAG
Ga0193733_10924931	3300020022	Soil	MPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMVLDSKQSAHENAG
Ga0193733_10998691	3300020022	Soil	MPCIRCGRVTVKLCTCSIEQAKDAFSAWSEAELEEAVKTLREVLEAKRSARWRHDIPN
Ga0210382_103605262	3300021080	Groundwater Sediment	MPCVRCGKLTVKLRTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN
Ga0210408_106481182	3300021178	Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELERAISTLRTVLDSKQGAHSKRDTS
Ga0193719_100607503	3300021344	Soil	MPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMVLDSKQSAH
Ga0222623_100708602	3300022694	Groundwater Sediment	MPCIRCGKVTVKLCTCSIEEAKHAFSAWSEAELEQIIYTLETVLESKRSARER
Ga0207653_100662861	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDTLSAWSDVELEQAISML
Ga0207653_102030042	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKVTVKLCTCAIEEAKEAFSAWSEDELERAISTLRTVVNSLKARNDVE
Ga0207684_1000103328	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEQAKDTLSAWSDVELEQAISMMREVLEAKRRASSSRERTELR
Ga0207684_1000672814	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTLRELLEAKRSARWRRDIPN
Ga0207684_1002889010	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTLREVLEAKRSARWRRDIPN
Ga0207684_103076152	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGRITVKLCTCSIEQARDAFSAWSEVEIEQAINTLRTVLESKRSIRWRRDMPN
Ga0207684_103176801	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLASKRNAH
Ga0207684_104795461	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKITVKLCTCSIEEATEAFSAWSEVELKKAINTLKRVLDSKQSAH
Ga0207646_109320242	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPCIRCGKTTVKLCTCSIEQAKEAFSARSEVELEQSACIAR
Ga0207687_105224952	3300025927	Miscanthus Rhizosphere	MPCIRCGKVTVKLCTCSIEEAKEAFSAWSEDELERAISTLRTVVNSLKARNDVE
Ga0207689_100354205	3300025942	Miscanthus Rhizosphere	MPCIRCGKVTVKLCTCSIEEAKEAFSAWSEDELERAISTLTTVVSSLKARNDVE
Ga0207674_103253751	3300026116	Corn Rhizosphere	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVDLERAISTLRTVLDSKQNAQSKRDTP
Ga0257170_10023473	3300026351	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARWRPDMPN
Ga0257170_10189991	3300026351	Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEAELEQIISTLETVLESKRSARER
Ga0257180_10287321	3300026354	Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEAELEQIISTLE
Ga0257150_10153872	3300026356	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELQQAINTLKRVLGSK
Ga0257166_10247001	3300026358	Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARWRRDM
Ga0257179_10059082	3300026371	Soil	MPCIRCGKLTVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN
Ga0257179_10564152	3300026371	Soil	MSCIRCGKVTVKLCPCSIEEVRNSFSAWSEAELEQIISTLETVLESKRSARER
Ga0257171_10539542	3300026377	Soil	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELRQAINTLKRVLASK
Ga0257178_10549121	3300026446	Soil	TVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN
Ga0257169_10009536	3300026469	Soil	MPCVRCGKLTVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRWRRAMPN
Ga0257181_10015715	3300026499	Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEVELEQIISTLETVLESKRSARER
Ga0257165_10987841	3300026507	Soil	MPCIRCGKITVKLCACSIEEAKEAFSAWSEAELEQIISTLET
Ga0257168_10027614	3300026514	Soil	MPCIRCGKITVKLCTCSIEEATEAFSAWSEVELKQAINTLKRVLDSKQSAH
Ga0256867_103514652	3300026535	Soil	MPCIRCGKTTVKWCTCSIEEAQEAFSAWSEVELKQAINTLKRVLASKQNAH
Ga0209648_100187888	3300026551	Grasslands Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELKQAINTLKTVLDSKQGAH
Ga0209117_11338322	3300027645	Forest Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELKKAINTLKTVLDSKQSGH
Ga0209701_106681451	3300027862	Vadose Zone Soil	MPCIRCGKITVKLCTCSIEEAKDAFSAWSEVELKQAINTLKTVLDSKQ
Ga0209590_108863411	3300027882	Vadose Zone Soil	VPGKRGGRITVKLCTCSIEQVKDAFSAWSEVELEQAINTLRKVLESKRSARWRD
Ga0257175_10138401	3300028673	Soil	MPCVRCGKLTVKRCTCSIEQVKEAFSAWSEVELEQAINTLRKVLESKRSIRW
Ga0307313_100673752	3300028715	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQVISTLRMVLDSKQSAHKKAG
Ga0307305_102959082	3300028807	Soil	KITVKLCACSIEEAKEAFSAWSEVELEQVISTLRTVLDSKQSARWRRDMPN
Ga0307305_104492381	3300028807	Soil	MPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLR
Ga0307312_103752954	3300028828	Soil	RAGGNGMPCIRCGKITVKLCTCSIEEAKETFSAWSEVELEQVISMLRMVLDSKQSAH
Ga0307312_105722521	3300028828	Soil	TVKLCTCSIEEAKEAFSAWSEVELEQVISTLRMVLDSKQSAHKKAG
Ga0299907_112231711	3300030006	Soil	MPCIRCGKVTVKLCTCSIEEASNSFFAWSEAELEQIISTLETILESKRSARER
Ga0308178_10867883	3300030990	Soil	MPCIRCGKITVKWCTCSIKEATEAFSSWSVVELNQAINTLKRVLVSKQSAH
Ga0299913_103554522	3300031229	Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEQAISTLRTVLDSKQSARRSRNMPN
Ga0307471_1004075074	3300032180	Hardwood Forest Soil	MPCIRCGKITVKLCTCSIEQATEALSAWSKVELKQA
Ga0307471_1013988302	3300032180	Hardwood Forest Soil	MPCIRCGKITVKLCTCSIEQAKEAFSAWSEVELEQAINTLSTVLESKRSARWRRDMPN
Ga0307472_1003886902	3300032205	Hardwood Forest Soil	MPCIRCGKITVKLCTCSIEEAKEAFSAWSEVELEEAVKTPREVLEAKRSARWRRDI
Ga0310810_1000138216	3300033412	Soil	MPCIRCGKITVKWCTCSIEEAKDAFSTWSEVELEHAIRTLRAVLDSKQRARGGRDNPN
Ga0310810_1000187724	3300033412	Soil	MPCIRCGKITVKWCTCSIEEAKEAFSAWSEVELKQAINTLKRVWPPSRTLTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences