Metagenome / Metatranscriptome Family F047226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047226
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	101 residues
Representative Sequence	MAGQEPAERPYKALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD
Number of Associated Samples	80
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.00 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (34.667 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.26% β-sheet: 0.00% Coil/Unstructured: 42.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.4.1.13: SLIDE domain	d1ofcx2	1ofc	0.66964
f.13.1.0: automated matches	d5c1ma_	5c1m	0.64788
f.13.1.2: Rhodopsin-like	d5dysa_	5dys	0.63805
f.13.1.0: automated matches	d6rnka_	6rnk	0.63323
d.92.1.12: Fungal zinc peptidase	d1eb6a_	1eb6	0.62747

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00005	ABC_tran	8.00
PF02274	ADI	5.33
PF00795	CN_hydrolase	4.67
PF00106	adh_short	2.67
PF12802	MarR_2	2.67
PF02627	CMD	2.00
PF01904	DUF72	2.00
PF13561	adh_short_C2	1.33
PF08281	Sigma70_r4_2	1.33
PF11762	Arabinose_Iso_C	1.33
PF04261	Dyp_perox	1.33
PF07748	Glyco_hydro_38C	1.33
PF01341	Glyco_hydro_6	1.33
PF09413	DUF2007	1.33
PF00291	PALP	1.33
PF07729	FCD	0.67
PF01979	Amidohydro_1	0.67
PF13489	Methyltransf_23	0.67
PF03364	Polyketide_cyc	0.67
PF00583	Acetyltransf_1	0.67
PF12680	SnoaL_2	0.67
PF04542	Sigma70_r2	0.67
PF02771	Acyl-CoA_dh_N	0.67
PF01590	GAF	0.67
PF13304	AAA_21	0.67
PF07702	UTRA	0.67
PF02128	Peptidase_M36	0.67
PF12697	Abhydrolase_6	0.67
PF09375	Peptidase_M75	0.67
PF01047	MarR	0.67
PF10518	TAT_signal	0.67
PF13411	MerR_1	0.67
PF13732	DUF4162	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	5.33
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	5.33
COG4874	Uncharacterized conserved protein	Function unknown [S]	5.33
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	2.00
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.00
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	2.00
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	1.33
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	1.33
COG5297	Cellulase/cellobiase CelA1	Carbohydrate transport and metabolism [G]	1.33
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.67
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.67
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.67
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.67 %
Unclassified	root	N/A	39.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.67 %
Unclassified	root	N/A	39.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.67 %
Unclassified	root	N/A	39.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	39.33 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.67 %
Unclassified	root	N/A	39.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.00 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.67 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.00 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.67 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.00 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	2.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.00 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	2.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.67 %
Actinoplanes aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.67 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10732801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	589	Open in IMG/M
3300004633\|Ga0066395_10815695	Not Available	561	Open in IMG/M
3300005329\|Ga0070683_101186931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300005329\|Ga0070683_101871757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300005332\|Ga0066388_100039652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4628	Open in IMG/M
3300005332\|Ga0066388_100167533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2793	Open in IMG/M
3300005332\|Ga0066388_100710637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1610	Open in IMG/M
3300005332\|Ga0066388_100809229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1528	Open in IMG/M
3300005332\|Ga0066388_103402660	Not Available	812	Open in IMG/M
3300005332\|Ga0066388_104745935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300005341\|Ga0070691_10926640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300005355\|Ga0070671_101286178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300005434\|Ga0070709_10134909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1689	Open in IMG/M
3300005434\|Ga0070709_10633002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300005435\|Ga0070714_100125558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2287	Open in IMG/M
3300005435\|Ga0070714_100132499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2228	Open in IMG/M
3300005435\|Ga0070714_100721794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300005436\|Ga0070713_101141856	Not Available	753	Open in IMG/M
3300005439\|Ga0070711_100743146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300005444\|Ga0070694_101036934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	682	Open in IMG/M
3300005467\|Ga0070706_100620422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1004	Open in IMG/M
3300005467\|Ga0070706_101420720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300005535\|Ga0070684_100549525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300005537\|Ga0070730_10002489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16742	Open in IMG/M
3300005548\|Ga0070665_101250631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	753	Open in IMG/M
3300005577\|Ga0068857_100708651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300005614\|Ga0068856_100081328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3214	Open in IMG/M
3300005764\|Ga0066903_100243800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2761	Open in IMG/M
3300005764\|Ga0066903_101041575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1501	Open in IMG/M
3300005764\|Ga0066903_101572542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300005764\|Ga0066903_101885496	Not Available	1144	Open in IMG/M
3300005764\|Ga0066903_102200528	Not Available	1063	Open in IMG/M
3300005764\|Ga0066903_102678943	Not Available	967	Open in IMG/M
3300005764\|Ga0066903_103296460	Not Available	872	Open in IMG/M
3300005764\|Ga0066903_105043272	Not Available	700	Open in IMG/M
3300005841\|Ga0068863_100798020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300005843\|Ga0068860_100159024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2178	Open in IMG/M
3300005902\|Ga0075273_10081935	Not Available	623	Open in IMG/M
3300005937\|Ga0081455_10728282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	629	Open in IMG/M
3300006028\|Ga0070717_10535235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1060	Open in IMG/M
3300006028\|Ga0070717_11386349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300006028\|Ga0070717_11401600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300006028\|Ga0070717_11998386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	522	Open in IMG/M
3300006175\|Ga0070712_100534219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	986	Open in IMG/M
3300006175\|Ga0070712_100984315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300006175\|Ga0070712_101042887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	708	Open in IMG/M
3300006852\|Ga0075433_11475366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300006871\|Ga0075434_100570885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300009101\|Ga0105247_11216578	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009174\|Ga0105241_12017157	Not Available	568	Open in IMG/M
3300009177\|Ga0105248_10512265	Not Available	1353	Open in IMG/M
3300009551\|Ga0105238_12063020	Not Available	604	Open in IMG/M
3300009792\|Ga0126374_10162693	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300009792\|Ga0126374_11387336	Not Available	572	Open in IMG/M
3300010043\|Ga0126380_10017063	Not Available	3401	Open in IMG/M
3300010043\|Ga0126380_10099225	Not Available	1742	Open in IMG/M
3300010043\|Ga0126380_10292989	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300010043\|Ga0126380_11919499	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010046\|Ga0126384_10368375	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1203	Open in IMG/M
3300010046\|Ga0126384_10420884	Not Available	1133	Open in IMG/M
3300010046\|Ga0126384_12340967	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010048\|Ga0126373_10316589	Not Available	1561	Open in IMG/M
3300010048\|Ga0126373_10420932	Not Available	1364	Open in IMG/M
3300010048\|Ga0126373_10426825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1355	Open in IMG/M
3300010048\|Ga0126373_11004512	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010358\|Ga0126370_10400654	Not Available	1128	Open in IMG/M
3300010358\|Ga0126370_10641019	Not Available	924	Open in IMG/M
3300010358\|Ga0126370_10923656	Not Available	790	Open in IMG/M
3300010358\|Ga0126370_11225616	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010358\|Ga0126370_12323627	Not Available	531	Open in IMG/M
3300010359\|Ga0126376_10047129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3028	Open in IMG/M
3300010359\|Ga0126376_11353184	Not Available	735	Open in IMG/M
3300010359\|Ga0126376_11355383	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300010359\|Ga0126376_11407695	Not Available	722	Open in IMG/M
3300010359\|Ga0126376_11642013	Not Available	676	Open in IMG/M
3300010359\|Ga0126376_11676032	Not Available	670	Open in IMG/M
3300010360\|Ga0126372_10656548	Not Available	1016	Open in IMG/M
3300010361\|Ga0126378_10400546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1485	Open in IMG/M
3300010361\|Ga0126378_10541729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1278	Open in IMG/M
3300010361\|Ga0126378_11846211	Not Available	688	Open in IMG/M
3300010366\|Ga0126379_10430639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1375	Open in IMG/M
3300010366\|Ga0126379_10937797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300010366\|Ga0126379_11814312	Not Available	714	Open in IMG/M
3300010366\|Ga0126379_12273369	Not Available	643	Open in IMG/M
3300010376\|Ga0126381_100345210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2056	Open in IMG/M
3300010376\|Ga0126381_101679087	Not Available	918	Open in IMG/M
3300010376\|Ga0126381_102214556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	790	Open in IMG/M
3300010376\|Ga0126381_102560210	Not Available	730	Open in IMG/M
3300010376\|Ga0126381_104377338	Not Available	546	Open in IMG/M
3300010398\|Ga0126383_10968857	Not Available	938	Open in IMG/M
3300010398\|Ga0126383_12470581	Not Available	604	Open in IMG/M
3300010401\|Ga0134121_10746470	Not Available	934	Open in IMG/M
3300012210\|Ga0137378_10333415	Not Available	1410	Open in IMG/M
3300012958\|Ga0164299_10834939	Not Available	661	Open in IMG/M
3300012971\|Ga0126369_10144574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2227	Open in IMG/M
3300012971\|Ga0126369_10594733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300012971\|Ga0126369_11444918	Not Available	778	Open in IMG/M
3300012971\|Ga0126369_12231305	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012984\|Ga0164309_10507961	Not Available	924	Open in IMG/M
3300013105\|Ga0157369_10521576	Not Available	1229	Open in IMG/M
3300013307\|Ga0157372_12709722	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300014968\|Ga0157379_11367585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300014969\|Ga0157376_10032874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4169	Open in IMG/M
3300015371\|Ga0132258_10843447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300016371\|Ga0182034_11415669	Not Available	608	Open in IMG/M
3300020070\|Ga0206356_10510429	Not Available	584	Open in IMG/M
3300020081\|Ga0206354_10446517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300021388\|Ga0213875_10129065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1182	Open in IMG/M
3300021560\|Ga0126371_10244569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300021560\|Ga0126371_10348619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1615	Open in IMG/M
3300021560\|Ga0126371_10527104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1330	Open in IMG/M
3300021560\|Ga0126371_10685113	Not Available	1173	Open in IMG/M
3300021560\|Ga0126371_10703370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1159	Open in IMG/M
3300021560\|Ga0126371_10734988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	1134	Open in IMG/M
3300021560\|Ga0126371_12407648	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_12654736	Not Available	607	Open in IMG/M
3300021560\|Ga0126371_13429204	Not Available	535	Open in IMG/M
3300022467\|Ga0224712_10152003	Not Available	1026	Open in IMG/M
3300022467\|Ga0224712_10421055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300024232\|Ga0247664_1075868	Not Available	776	Open in IMG/M
3300024245\|Ga0247677_1072479	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300024254\|Ga0247661_1007982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1731	Open in IMG/M
3300024254\|Ga0247661_1040266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300024290\|Ga0247667_1039434	Not Available	891	Open in IMG/M
3300025906\|Ga0207699_10056520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2339	Open in IMG/M
3300025908\|Ga0207643_11114780	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300025910\|Ga0207684_10671531	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300025915\|Ga0207693_11080821	Not Available	610	Open in IMG/M
3300025916\|Ga0207663_10296819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300025916\|Ga0207663_10692058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	807	Open in IMG/M
3300025916\|Ga0207663_11525045	Not Available	538	Open in IMG/M
3300025928\|Ga0207700_10070059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2694	Open in IMG/M
3300025928\|Ga0207700_10222898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1599	Open in IMG/M
3300025929\|Ga0207664_11023053	Not Available	740	Open in IMG/M
3300025929\|Ga0207664_11982546	Not Available	505	Open in IMG/M
3300026088\|Ga0207641_12608091	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026095\|Ga0207676_10755892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300027857\|Ga0209166_10010361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6060	Open in IMG/M
3300027874\|Ga0209465_10392063	Not Available	695	Open in IMG/M
3300027874\|Ga0209465_10496907	Not Available	609	Open in IMG/M
3300028379\|Ga0268266_10936471	Not Available	838	Open in IMG/M
3300028379\|Ga0268266_11988591	Not Available	555	Open in IMG/M
3300028381\|Ga0268264_11216140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	763	Open in IMG/M
3300031890\|Ga0306925_12109284	Not Available	528	Open in IMG/M
3300031912\|Ga0306921_12132097	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300032783\|Ga0335079_11052126	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300032805\|Ga0335078_10069417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5154	Open in IMG/M
3300032892\|Ga0335081_10472052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1588	Open in IMG/M
3300032898\|Ga0335072_10038675	All Organisms → cellular organisms → Bacteria	6545	Open in IMG/M
3300032955\|Ga0335076_10057596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3843	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	16.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.67%
Loam	Environmental → Terrestrial → Soil → Loam	32.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	34.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005902	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_107328011	3300004633	Tropical Forest Soil	MAVHEPAEQSHQALRAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR*
Ga0066395_108156951	3300004633	Tropical Forest Soil	RRPSEQAQEPKKPNGAGAMTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGEGLPG*
Ga0070683_1011869312	3300005329	Corn Rhizosphere	MAAEQSAGRSMDARQEASEQRTREAASRNRKLAATALMRLGADCKHEWEDVATEVILHSEYSWSQIASKLGLTRDQAVYRFRQLLSAAGVD*
Ga0070683_1018717571	3300005329	Corn Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0066388_1000396526	3300005332	Tropical Forest Soil	MTVREPDEQANEALQAANEQRTLEATGRNRKLAATALMRLGGDCPPELEDVATELILHSENSWSQIASRLGVTRSQAVYRFRRLLTTAGVAENGGANLQ*
Ga0066388_1001675332	3300005332	Tropical Forest Soil	MSQQQPVEQPYQALHAANEQRTIEAAGRNRKLAAAALLRLGADCPPECEEVATEVILHSEYSWTQIATRLGVTRGQAVYRFRRLLAAAGVAGVEGD*
Ga0066388_1007106371	3300005332	Tropical Forest Soil	MTVEEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGGSLPG*
Ga0066388_1008092292	3300005332	Tropical Forest Soil	MTVQEPAQQSHQALQAANEQRTLEAASRNRKLAATALMRLGEDCPPEWEEVATEVILHSENSWSQIARRLGVTRGQAVYRFRRLLIMAGVADGSTPRPDGHGAG*
Ga0066388_1034026602	3300005332	Tropical Forest Soil	MAVEQSAGQPHQALEAANEQRSMEASGRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIARRLGVTRGQAVCRFRRLLIAAGVDDGSAPQPEVTGLSSGA*
Ga0066388_1047459352	3300005332	Tropical Forest Soil	MALQESARRPHQALHAANERRSIEASHRNRKLAAIALMRLGEDCPTELEDVAVELILHSQYSWSQMARRLGVTRGQAVYRFRRLLSTAGVEDNGISGRDVPNTRRA*
Ga0070691_109266401	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VGMAAQEPAEHRYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0070671_1012861782	3300005355	Switchgrass Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVEGD*
Ga0070709_101349091	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQESAGQSHEALRTADEQRTIEASRRNRKLAATALMRLGGDCPPEWEDVATELILHSQYSWSQIAGRLGVTRGQAVYRFRRLLSAADVDDSGISSQDVPSTRRA*
Ga0070709_106330021	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSVQQPAERPYEALHAANEQRTIEAAGRNRKLAAAALLRLGADCPPECEEVATEVILHSEYSWTQIASRLGVTRGQAVYRFRRLLAAAGIAGVEGD*
Ga0070714_1001255584	3300005435	Agricultural Soil	MAAREPAEQPYQALHDANEERTIEAAGRNRKLAATALMRLGPDCPPECEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRSGGCWPRPA*
Ga0070714_1001324992	3300005435	Agricultural Soil	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAAD*
Ga0070714_1007217942	3300005435	Agricultural Soil	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVATEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLLAAAGVAGMEGD*
Ga0070713_1011418562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVATEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLLAAAGVAGTEGD*
Ga0070711_1007431462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQERAEQPYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVEGD*
Ga0070694_1010369342	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSVQQPAERPYEALHAANEQRTIEAAGRNRKLAAAALLRLGADCPPECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD*
Ga0070706_1006204222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQEPAEQSHEALKAANEQRTLEASGRNRKLAAAALMRLGADCPGEWEDVATEVILHSQYSWSQIADRLGVSRGQAVYRFQRLLSAAGVGDNGS*
Ga0070706_1014207202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSEPAEQPYQALHDANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD*
Ga0070684_1005495252	3300005535	Corn Rhizosphere	MAAQEPAEHRYQALHAANQQRAIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0070730_1000248918	3300005537	Surface Soil	MAVQEPAGQSHQALHAANEQRTIEASSRNRKLAATALMRLGADCPPEWEDVATEVILHSQYSWSQIAQRLGVTRGQAVYRFRRLLIAAGVADRSTPPRDVPGLR*
Ga0070665_1012506312	3300005548	Switchgrass Rhizosphere	MAADGSAERPTDALRAANDQRTLEASSRNRKLAAAALMRMGADCPREWEDVATEVILHSEYSWSQIASKLGVTRSQAVYRFRRLLSAAEVDGSPA*
Ga0068857_1007086512	3300005577	Corn Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0068856_1000813282	3300005614	Corn Rhizosphere	MSQQERAEQPYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0066903_1002438002	3300005764	Tropical Forest Soil	MSQQEPADRPYQALHAANEQRSIEAAGRNRKLAATALMRLGPDCPPECEEVATEVILHSEYSWTQIASRLGVTRGQAVYRFRRLLAAAGVAGVEGD*
Ga0066903_1010415752	3300005764	Tropical Forest Soil	MAVEEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPSEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLIAAGVDDTGF*
Ga0066903_1015725423	3300005764	Tropical Forest Soil	MMVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDGVGAPRQDPARLR*
Ga0066903_1018854962	3300005764	Tropical Forest Soil	MTVQEPAQQPHRALQVANQQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIANRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGEGLPG*
Ga0066903_1022005282	3300005764	Tropical Forest Soil	EPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLSGSGRESLPG*
Ga0066903_1026789432	3300005764	Tropical Forest Soil	MALQKSAGRSHQALHAANERRSIEASHRNRKLAATALMRLGEDCPTEWEDVALELILHSQYSWSQTARRLGVTRGQAVYRFRRLLTAAGVENNGVSSRDVPSTRRA*
Ga0066903_1032964602	3300005764	Tropical Forest Soil	MAVQESAGHVHEALQAANEQRSMESSSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIASRLGVTRGQAVYRFRRLLIAAGVDEGSAPHDDGTRHTGADPA*
Ga0066903_1050432721	3300005764	Tropical Forest Soil	VREPDEQANEALQAANEQRTLEATGRNRKLAATALMRLGGDCPPELEDVATELILHSENSWSQIASRLGVTRSQAVYRFRRLLTTAGVAENGSANLQ*
Ga0068863_1007980202	3300005841	Switchgrass Rhizosphere	MAGQEPAERPYKALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0068860_1001590242	3300005843	Switchgrass Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD*
Ga0075273_100819351	3300005902	Rice Paddy Soil	MTEQEPADQSQEGLQAANERRVLEASGRNRKLAATALMRLGADCPPEWEEVGTEVILHSQYSWAEIAGRLGVTRSQAVYRFRRLLTAAGVDDSVPSPEREPGGS*
Ga0081455_107282821	3300005937	Tabebuia Heterophylla Rhizosphere	MAVQEPDSQSNPALQAANEERTLEASSRNRKLAATALMRLGADCPDEWEDVATEVILHSQYSWSDIAGKLGVTRSQAIYRFRRLLTAAGVEDSEPSHKGAEQS*
Ga0070717_105352352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MCSCKPPAGVRAGEPGSRHRMSQQEPAEHPYQALHAANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVASVEGD*
Ga0070717_113863492	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQEPVEHPYQALHDANEQRTIEAAGRNRKLAATALMRLGPDCPPECEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGD*
Ga0070717_114016002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPERAQQPHRALQVANEQRTMEASGQNRKLAAAALMRLGADCPREWEDVATEVILHSEYSWSQIAHRLGVTRGEAVYRF
Ga0070717_119983861	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAA
Ga0070712_1005342193	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGVNAGEPGSRHRMSQQEPAERPYQALHAANEQRTIEAAGRNRKLAAEALLRLGPNCPPECEDVATEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLLAAAGVAGAAGD*
Ga0070712_1009843152	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TCSCKPPAGVNAGEPGSRHRMSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0070712_1010428872	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAA
Ga0075433_114753661	3300006852	Populus Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAAAALLRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0075434_1005708851	3300006871	Populus Rhizosphere	MAAQEPAEHRYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0105247_112165782	3300009101	Switchgrass Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVARLEGD*
Ga0105241_120171571	3300009174	Corn Rhizosphere	MAVQEPAERPYKALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0105248_105122651	3300009177	Switchgrass Rhizosphere	MSVQQPAERPYEALHAANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0105238_120630201	3300009551	Corn Rhizosphere	MSQQERAEQPYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVTGVE
Ga0126374_101626932	3300009792	Tropical Forest Soil	MAAGDRIRSQRAAPHTEKANGAAAMAVHEPAEQSHQALRAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR*
Ga0126374_113873361	3300009792	Tropical Forest Soil	MAVEQSAGKPHQALQAANEQRSMEASGRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIARRLGVTRGQAVCRFRR
Ga0126380_100170632	3300010043	Tropical Forest Soil	MTVREPDEQANEALQAANEQRTLEATGRNRKLAATALMRLGGDCPPELEDVATELILHSENSWSQIASRLGVTRSQAVYRFRRLLTTAGVAENGSANLQ*
Ga0126380_100992252	3300010043	Tropical Forest Soil	MAVEQSAGQPHQALEAANEQRSMEASGRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIARRLGVTRGQAVYRFQRLLIAAGLDDGSAPRPEVTGLL*
Ga0126380_102929891	3300010043	Tropical Forest Soil	MALQESARRPHQALHAANERRSIEASHRNRKLAAIALMRLGEDCPTELEDVAVELILHSQYSWSEIARRLGVTRGQAVYRFRRLLSTAGVEDHGISTRDVPN*
Ga0126380_119194992	3300010043	Tropical Forest Soil	MAVQEPAERPYEALHAANEQRSIEAAGRNRKLAATALMRLGADSPPECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAMAGVAGVEGD*
Ga0126384_103683752	3300010046	Tropical Forest Soil	MTVQEPAQQSHQALQAANEQRTLEAASRNRKLAATALMRLGEDCPPEGEEVATEVILHSENSWSQIARRLGVTRGQAVYRFRRLLIMAGVADGSTPRPDGHGAG*
Ga0126384_104208842	3300010046	Tropical Forest Soil	MAVEQSAGQPHQALQAANEQRSMEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSQIARRLGVTRGQAVYRFRQMLIAAGVDDGSAPRPEVTGLS*
Ga0126384_123409672	3300010046	Tropical Forest Soil	MSQREPAGQAYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPECEEGGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLATAGVAGVAGIEDD*
Ga0126373_103165893	3300010048	Tropical Forest Soil	MAVQESAGHVHEALQAANEQRSMEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIASRLGVTRGQAVYRFRQLLIAAGVDEGSAPHDDGTRHTGADPA*
Ga0126373_104209322	3300010048	Tropical Forest Soil	MALQKSTGRSHQALHAANERRSIEASHRNRKLAATALMRLGEDCPTEWEDVALELILHSQYSWSQTARRLGVTRGQAVYRFRRLLTAAGVENNGVSSRDVPSTRRA*
Ga0126373_104268252	3300010048	Tropical Forest Soil	MAAGDRIRTIEQPPVPEESGAAAMALQESTGRSHQALHAANERRSIEASRRNRKLAATALMRMGEDCPTEWEDVAIELILHSQYSWSQLARRLGVTRGQAVYRFRRLLSAAGVEDNGISRRDVPATGTSIN*
Ga0126373_110045121	3300010048	Tropical Forest Soil	TANGAVAMAVQEPAEQAPQPYEALQAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR*
Ga0126370_104006542	3300010358	Tropical Forest Soil	MGVSEQAERPYEALHAANEQRSIEAAGRNRKLAATALMRLGADCPPECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRMLAMAGVAGVEGD*
Ga0126370_106410192	3300010358	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKMAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGGSLPG*
Ga0126370_109236561	3300010358	Tropical Forest Soil	MAVEQPAGQAHQALQTADEQHSIEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSQIARRLGVTRGQAVYRFRRLFIAAGVDEGSAPRPEVPGL
Ga0126370_112256161	3300010358	Tropical Forest Soil	MSQREPAEHPYQALHAANEQRSIEAAGRNRKLAATALMRLGPDCPPECEEVATEVILHSEYSWTQIASRLGVTRGQAVYRFRRLLAAAGVAGVEGD*
Ga0126370_123236271	3300010358	Tropical Forest Soil	MTVREPDEGSRQTLNAANEQRIREATGRNRKLAATALLRLGADCPPELEDVGTEVILHSEYSWSQIATRLGVSRSQAVHRFRRLLTTAGVAENGSVNA
Ga0126376_100471292	3300010359	Tropical Forest Soil	MAVQESAEESHEALQTANEQRTIEASGRNRKLAATALMRLGGDCPPEWEDVATELILHSQYSWSQIADRLGVTRGQAVYRFRRLLSAADVDDSGISGQDVTSTRRA*
Ga0126376_113531841	3300010359	Tropical Forest Soil	MGVSEQAERPYEALHAANEQRSIEAAGRNRKLAATALMRLGADCPPECEEVATEVILHSEYSWTQIAEILGVTRGQAVYRIRRMLA
Ga0126376_113553831	3300010359	Tropical Forest Soil	SHQALRAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR*
Ga0126376_114076951	3300010359	Tropical Forest Soil	MAVEQSAGQPHQALQAAIEQRSMEASGRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIARRLGVTRGQAVCRFR
Ga0126376_116420131	3300010359	Tropical Forest Soil	NAGQAGSRHGMSQREPAEHPYQALHAANEQRSIEAAGRNRKLAATALMRLGANCPPECEDVATEVILHSEYSWTQIASRLGVTRGQAVYRFRRLLAAAGVAGVEGD*
Ga0126376_116760321	3300010359	Tropical Forest Soil	QSAGHVHQAPQSANEQRSMEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSQIARRLGVTRGQAVYRFRRLLIAAGVDDGSDPRPEVTGLL*
Ga0126372_106565481	3300010360	Tropical Forest Soil	MDRRPSEQAQEPKKPNGAGAMTVEEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGAGGGSLPG*
Ga0126378_104005462	3300010361	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALIRLGADCPPEWEYVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDGAGAPRHGLSGSGDGSLPG*
Ga0126378_105417292	3300010361	Tropical Forest Soil	MMVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLNGSGGESLPG*
Ga0126378_118462112	3300010361	Tropical Forest Soil	MAVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPDEWEDVATEVILHSEYSWSQIARRLGVTRGQAVYRFRRLLIAAGVNDARS*
Ga0126379_104306393	3300010366	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAA
Ga0126379_109377973	3300010366	Tropical Forest Soil	QQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIARRLGVTRGQAVYRFRRLLIAAGVDDTGF*
Ga0126379_118143122	3300010366	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALIRLGADCPPEWEYVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDGAGAPRHGLSGSGDGSLP
Ga0126379_122733691	3300010366	Tropical Forest Soil	EPTANGTAAMAVQQSAGHVHQALQAANEQRSMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLSGSGRESLPG*
Ga0126381_1003452102	3300010376	Tropical Forest Soil	MAVQQSAGHVHQALQAANEQRSMEAASRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSQIASRLGVTRGQAVYRFRRLLIAAGVDEDSAPRPEVPGLDKS*
Ga0126381_1016790872	3300010376	Tropical Forest Soil	MALQESAGRSHQALHAANERRSIEASHRNRKLAATALMRLGEDCPTEWEDVAVEVILHSQYSWSQVARRLGVTRGQAVYRFRRLLSAAGVDDNGISSGDEPSTRRA*
Ga0126381_1022145561	3300010376	Tropical Forest Soil	MALQESAGRSHQALQAANERRIIEAAHRNRKPAAAALMRMGDECPTEWEDVAVELILHSQYSWSEIARRLGVTRGQAVYRFRRL
Ga0126381_1025602101	3300010376	Tropical Forest Soil	MMVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLSGSGRESLPG*
Ga0126381_1043773381	3300010376	Tropical Forest Soil	MAAQQSAGHVHQALQAANEQRSMEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIASRLGVTRGQAVYRFRQLLIAAGVDEGSAPDGDGTRHTGADLA*
Ga0126383_109688572	3300010398	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGASRQGLNGSGGESLPG*
Ga0126383_124705811	3300010398	Tropical Forest Soil	SQRAAPEPKANGAAAMAVQEPAERSHHALRAANEQRSIEASSRNRKLAATALMRLGADCPPEWEEVATEVILHSEYSWSEIARRLGVTRGQAVYRFRRLLIAGGGGNGSTPRPGVPGPG*
Ga0134121_107464701	3300010401	Terrestrial Soil	MSQQEPAEHPDQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0137378_103334152	3300012210	Vadose Zone Soil	MTVQEPAERTNQPLHAANKQRTIEAAGRNRKLAAAALMRLGGDCPPAWEEVATEVILHSQYSWSQIARRLGVTRGQAVYRFRRLLAAAGVADSSAPRPDAHGLG*
Ga0164299_108349391	3300012958	Soil	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGGTRGQAGYRFLRLLTAAGVARVEGD*
Ga0126369_101445742	3300012971	Tropical Forest Soil	MAAGDRIRSQRAAPHTEKANGAAAMTVHEPAEQSHQALRAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR*
Ga0126369_105947331	3300012971	Tropical Forest Soil	MDRRPSEQAQEPKKPNGAGAMTVEEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAKRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGEGLPG*
Ga0126369_114449182	3300012971	Tropical Forest Soil	MALQKSTGRSHHELHAANERRSIEASHTTRKLAATALMRLGEDCPTEWEDVALELILHSQYSWSQTARRLGVTRGQAVYRFRRLLIAAGLDDGSALRPEVTGLS*
Ga0126369_122313051	3300012971	Tropical Forest Soil	MSQQEPEERPYQALYAANEQRSIEAAGRNRKLAATALMRLGPDCPPECEEVATEVILHSEYSWTQIASRLGVTRGQAVYRFRRLLAEAGVAGVEGD*
Ga0164309_105079611	3300012984	Soil	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPPECEEVATEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLLTAAGVARLEGD*
Ga0157369_105215761	3300013105	Corn Rhizosphere	IAIGAAAMAGQEPAERPYKALRAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0157372_127097221	3300013307	Corn Rhizosphere	VQLDLAPVGGTGPAERPYEALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE*
Ga0157379_113675851	3300014968	Switchgrass Rhizosphere	MSQQEPAEHPDQALHDANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD*
Ga0157376_100328745	3300014969	Miscanthus Rhizosphere	MSQQEPAEHLYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD*
Ga0132258_108434471	3300015371	Arabidopsis Rhizosphere	AERPYKALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLATAGVAGVAGVEDE*
Ga0182034_114156691	3300016371	Soil	MAAQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCRPEWEDVATELILHSQYSWSQIAHRLGVTRGQAVYRFRRLLIAAGVDDTGS
Ga0206356_105104291	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSEPAEQPYQALHDANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD
Ga0206354_104465172	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MAVSEPAEQPYQALHDANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVY
Ga0213875_101290652	3300021388	Plant Roots	MAVQKPSRPHGALQTADEQRTIEASRQSRKLAATALMRLGDDCPPEWEDVATELILHSQYSWSEIADRLGVTRGQAVHRFRRLLSAAGVEGSGTPDRGGSGGTQRD
Ga0126371_102445693	3300021560	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIANRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLNGSGGEGLPG
Ga0126371_103486191	3300021560	Tropical Forest Soil	MALQKSTGRSHQALHAANERRSIEASHRNRKLAATALMRLGEDCPTEWEDVALELILHSQYSWSQTARRLGVTRGQAVYRFRRLLTAAGVENNGVSSRDVPSTRRA
Ga0126371_105271041	3300021560	Tropical Forest Soil	MTVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLSGSGRESLPG
Ga0126371_106851131	3300021560	Tropical Forest Soil	NEALQAANEQRTMEASARNRKLAATALMRLGSECPPEWEDVATEVILHSQYSWSQIADRLGVTRGQAVYRFRRLLLAAGVDGTGAARQDLSDLR
Ga0126371_107033701	3300021560	Tropical Forest Soil	MVVQEPAEQAHQANEALQAANEQRTMEASARNRKLAATALMRLGSDGPPEWEDVATEVILHSEYSWSQIARRLGVTRGQAVYRFRRLLLAAGVDGTGAARQDLSDLR
Ga0126371_107349882	3300021560	Tropical Forest Soil	MALQESAGRSHQALHAANERRSIEASHRNRKLAATALMRLGEDCPTEWEDVAVEVILHSQYSWSQVARRLGVTRGQAVYRFRRLLSAAGVDDNGISSGDEPSTRRA
Ga0126371_124076481	3300021560	Tropical Forest Soil	EPKKPNGAGAMTVQEPAQQPHRALQVANQQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATELILHSQCSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQGLSGSGGESLPG
Ga0126371_126547362	3300021560	Tropical Forest Soil	MAVEQSAGQPHQALQAANEQRSMEASSRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSEIARRLGVTRGQAVYRFQRLLIAAGLDDGSAPRPEVTGLS
Ga0126371_134292042	3300021560	Tropical Forest Soil	MAVQQSAGHVHQALQAANEQRSMEAASRNRKLAAAALMRLGADCRPEWEDVATEVILHSQYSWSQIASRLGVTRGQAVYRFRRLLIAAGVDEDSAPRPEVPGLDKS
Ga0224712_101520031	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE
Ga0224712_104210551	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MAAEQSAGRSMDARQEASEQRTREAASRNRKLAATALMRLGADCKHEWEDVATEVILHSEYSWSQIASKLGLTRDQAVYRFRQLLSAAGVD
Ga0247664_10758682	3300024232	Soil	MAVSEPAEQPYQALHDANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVARLEGD
Ga0247677_10724791	3300024245	Soil	RSEPSRCMCSCKPPAGVNAGEPGSRHRMSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGVEGD
Ga0247661_10079823	3300024254	Soil	MAVSEPAEQPYQALHDANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD
Ga0247661_10402662	3300024254	Soil	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGVEGD
Ga0247667_10394342	3300024290	Soil	AGEPGSRHRMSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVGTEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLLAAAGVAGVEGD
Ga0207699_100565203	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQERAEQPYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYR
Ga0207643_111147801	3300025908	Miscanthus Rhizosphere	HAANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD
Ga0207684_106715311	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQEPAEQSHEALKAANEQRTLEASGRNRKLAAAALMRLGADCPGEWEDVATEVILHSQYSWSQIADRLGVSRGQAVYRFQRLLSAAGVGDNGS
Ga0207693_110808212	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	EHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD
Ga0207663_102968192	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQERAEQPYQALHAANEQRTIEAAGRNRKLAAAALMRLGSDCPPEFEEVGTEVILHSEYSWTQIADRLGVTRGQAVYRFRRLLAAAGVAGVAGVEGD
Ga0207663_106920582	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVARLEGD
Ga0207663_115250452	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSVQQPAERPYEALHAANEQRTIEAAGRNRKLAAAALLRLGADCPPECEEVATEVILHSEYSWTQIADRLGVTRGQAVY
Ga0207700_100700591	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQESAGQSHEALRTADEQRTIEASRRNRKLAATALMRLGGDCPPEWEDVATELILHSQHSWSQIAGRLGVTRGQAVYRFRRLLSAADVDDSGISSQDVPSTRRA
Ga0207700_102228981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAVQEPAERPYEALHAANEQRTIEAAGRNRKLAATALMRLGSDCPPEFEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVA
Ga0207664_110230532	3300025929	Agricultural Soil	MAAREPAEQPYQALHDANEERTIEAAGRNRKLAATALMRLGPDCPPECEEVGTEVILHSEYSWTQIAERLGVTRGQAVYRSGGCWPRPA
Ga0207664_119825462	3300025929	Agricultural Soil	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGPNCPPECEEVATEVILHSEYSWTQIAGRLGVTRGQAVYRFRRLL
Ga0207641_126080912	3300026088	Switchgrass Rhizosphere	LHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLTAAGVAGVEGD
Ga0207676_107558922	3300026095	Switchgrass Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGVAGVDGE
Ga0209166_100103614	3300027857	Surface Soil	MAVQEPAGQSHQALHAANEQRTIEASSRNRKLAATALMRLGADCPPEWEDVATEVILHSQYSWSQIAQRLGVTRGQAVYRFRRLLIAAGVADRSTPPRDVPGLR
Ga0209465_103920632	3300027874	Tropical Forest Soil	MMVQEPAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLLAAGVDSVGAPRQSLSGSGRESLPG
Ga0209465_104969072	3300027874	Tropical Forest Soil	MAVHEPAEQSHQALRAANEQRTMEASSRNRKLAAAALMRLGGDCPPEWEDVATEVILHSQYSWSQIARRLGLTRGQAVYRFRRLLMAAGVGDGRTPRPEVPGLR
Ga0268266_109364711	3300028379	Switchgrass Rhizosphere	MAADGSAERPTDALRAANDQRTLEASSRNRKLAAAALMRMGADCPREWEDVATEVILHSEYSWSQIASKLGVTRSQAVYRFRRLLSAAEVDGSPA
Ga0268266_119885912	3300028379	Switchgrass Rhizosphere	MSQQEPAEHLYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD
Ga0268264_112161402	3300028381	Switchgrass Rhizosphere	MSQQEPAEHPYQALHDANEQRTIEAAGRNRKLAAAALLRLGADCPLECEEVATEVILHSEYSWTQIAERLGVTRGQAVYRFRRLLAAAGVAGAAGD
Ga0306925_121092841	3300031890	Soil	MAVEESAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPDEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLIAAGVDDIGS
Ga0306921_121320971	3300031912	Soil	VEESAQQPHRALQVANEQRTMEASGRNRKLAAAALMRLGADCPPEWEDVATEVILHSQYSWSQIAHRLGVTRGQAVYRFRRLLIAAGVDDTGS
Ga0335079_110521262	3300032783	Soil	MAVQESAGRSHEALETANEQRTIEASGRNRKLAATALMRMGGDCPPEWEDVATELILHSQYSWSQIASRLGVTRGQAVDRFRRMLSAAGLDDSGLLSEDVPGRRRT
Ga0335078_100694172	3300032805	Soil	MAVQESAGRSHEALETANEQRTIEASGRNRKLAATALMRMGGDCPPEWEDVATELILHSQYSWSQIASRLGVTRGQAVDRFRRLLSAAGLDDSGLLSEDVPGRRRT
Ga0335081_104720522	3300032892	Soil	MAVQESAGRSHEALETANEQRTIEASGRNRKLAATALMRMGGDCPPEWEDVATELILHSQYSWSQIASRLGVTRGQAVYRFRRLLSAAGLDDSGLLSEDVPGRRRT
Ga0335072_100386758	3300032898	Soil	MALQESAGRSHQALHAANERRSAEASRRNRKLAATALMRLGEDCPTEWEDVALEVILHSQYSWSQIARRLGVTRSQAVYRFRRLLRAAHVERSALPDL
Ga0335076_100575963	3300032955	Soil	MALQESAGRSRQALHAANERRSIEASRKNRKLAATALMRLGEDCPTEWEDVALELILHSQYSWSQLARRLGVTRSQALYRFRRLLTAAGVEHNGISSRDVPSTRRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047226

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences