Metagenome / Metatranscriptome Family F047258

Basic Information
Family ID	F047258
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	87 residues
Representative Sequence	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDQPTPAGAVSPLRKVEPL
Number of Associated Samples	125
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.52 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	82.00 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Bacteria (54.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.66% β-sheet: 6.90% Coil/Unstructured: 53.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF04542	Sigma70_r2	32.67
PF08281	Sigma70_r4_2	18.00
PF00027	cNMP_binding	8.67
PF07690	MFS_1	8.00
PF13411	MerR_1	2.00
PF01037	AsnC_trans_reg	1.33
PF01844	HNH	1.33
PF00933	Glyco_hydro_3	0.67
PF00196	GerE	0.67
PF13683	rve_3	0.67
PF13700	DUF4158	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	32.67
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	32.67
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	32.67
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	32.67
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.00 %
Unclassified	root	N/A	46.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.00 %
Unclassified	root	N/A	46.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.00 %
Unclassified	root	N/A	46.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.33 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.67 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.67 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.00 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.67 %
Caulobacter vibrioides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	0.67 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_184967	Not Available	535	Open in IMG/M
3300002568\|C688J35102_120983677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5522	Open in IMG/M
3300005162\|Ga0066814_10004849	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005328\|Ga0070676_11411401	Not Available	534	Open in IMG/M
3300005332\|Ga0066388_106279963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	600	Open in IMG/M
3300005338\|Ga0068868_100928135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300005347\|Ga0070668_101078366	Not Available	724	Open in IMG/M
3300005363\|Ga0008090_15557831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300005434\|Ga0070709_10238253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1305	Open in IMG/M
3300005434\|Ga0070709_10248445	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005435\|Ga0070714_100486459	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300005435\|Ga0070714_101618975	Not Available	632	Open in IMG/M
3300005435\|Ga0070714_101698377	Not Available	617	Open in IMG/M
3300005435\|Ga0070714_102066060	Not Available	555	Open in IMG/M
3300005436\|Ga0070713_100484137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1166	Open in IMG/M
3300005436\|Ga0070713_101485892	Not Available	657	Open in IMG/M
3300005436\|Ga0070713_101570761	Not Available	638	Open in IMG/M
3300005437\|Ga0070710_10310874	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005439\|Ga0070711_101284092	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005440\|Ga0070705_100709389	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005444\|Ga0070694_100617821	Not Available	874	Open in IMG/M
3300005445\|Ga0070708_100303398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1503	Open in IMG/M
3300005614\|Ga0068856_100186628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2087	Open in IMG/M
3300005719\|Ga0068861_101041362	Not Available	783	Open in IMG/M
3300005764\|Ga0066903_104363407	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006046\|Ga0066652_100569228	Not Available	1064	Open in IMG/M
3300006173\|Ga0070716_101282814	Not Available	591	Open in IMG/M
3300006175\|Ga0070712_100083036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2325	Open in IMG/M
3300006175\|Ga0070712_101116037	Not Available	685	Open in IMG/M
3300006579\|Ga0074054_12081744	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300006755\|Ga0079222_11656600	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006797\|Ga0066659_10949501	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006804\|Ga0079221_10283335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	962	Open in IMG/M
3300006806\|Ga0079220_10152804	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300006871\|Ga0075434_100100168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2903	Open in IMG/M
3300006903\|Ga0075426_10480723	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300006903\|Ga0075426_10873896	Not Available	678	Open in IMG/M
3300006904\|Ga0075424_101060585	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300006914\|Ga0075436_100909043	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006954\|Ga0079219_10870007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	722	Open in IMG/M
3300007076\|Ga0075435_101845681	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009090\|Ga0099827_10324236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300009098\|Ga0105245_11761733	Not Available	672	Open in IMG/M
3300009148\|Ga0105243_10920332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300009177\|Ga0105248_12257888	Not Available	619	Open in IMG/M
3300009545\|Ga0105237_11528798	Not Available	674	Open in IMG/M
3300009553\|Ga0105249_11192707	Not Available	832	Open in IMG/M
3300010046\|Ga0126384_11267642	Not Available	682	Open in IMG/M
3300010361\|Ga0126378_10487188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300010366\|Ga0126379_12203217	Not Available	652	Open in IMG/M
3300010371\|Ga0134125_10211273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2158	Open in IMG/M
3300010373\|Ga0134128_11672856	Not Available	700	Open in IMG/M
3300010373\|Ga0134128_12257598	Not Available	599	Open in IMG/M
3300010373\|Ga0134128_12671333	Not Available	550	Open in IMG/M
3300010376\|Ga0126381_101255921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300010396\|Ga0134126_10138465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2960	Open in IMG/M
3300010396\|Ga0134126_11511894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300010867\|Ga0126347_1126511	Not Available	667	Open in IMG/M
3300010880\|Ga0126350_11371729	Not Available	670	Open in IMG/M
3300012198\|Ga0137364_10056609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2633	Open in IMG/M
3300012199\|Ga0137383_10000607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19106	Open in IMG/M
3300012206\|Ga0137380_10002153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16558	Open in IMG/M
3300012210\|Ga0137378_11208104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300012212\|Ga0150985_113074989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2673	Open in IMG/M
3300012357\|Ga0137384_10318601	Not Available	1291	Open in IMG/M
3300012362\|Ga0137361_10278208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1529	Open in IMG/M
3300012685\|Ga0137397_10563713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300012930\|Ga0137407_10025918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4494	Open in IMG/M
3300012944\|Ga0137410_10981040	Not Available	718	Open in IMG/M
3300012955\|Ga0164298_10364709	Not Available	920	Open in IMG/M
3300012958\|Ga0164299_10183135	Not Available	1193	Open in IMG/M
3300012961\|Ga0164302_10362538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300013105\|Ga0157369_10285954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1717	Open in IMG/M
3300014166\|Ga0134079_10193094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300016270\|Ga0182036_11106666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300016294\|Ga0182041_10477174	Not Available	1077	Open in IMG/M
3300016357\|Ga0182032_10408963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300016387\|Ga0182040_11429068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300017959\|Ga0187779_10372576	Not Available	926	Open in IMG/M
3300017961\|Ga0187778_11072493	Not Available	560	Open in IMG/M
3300018058\|Ga0187766_10148079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300018468\|Ga0066662_10028204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3288	Open in IMG/M
3300019890\|Ga0193728_1116430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300020579\|Ga0210407_10064817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2739	Open in IMG/M
3300020581\|Ga0210399_10031930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4205	Open in IMG/M
3300021088\|Ga0210404_10084780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300021178\|Ga0210408_10472566	Not Available	997	Open in IMG/M
3300021178\|Ga0210408_10949066	Not Available	667	Open in IMG/M
3300021362\|Ga0213882_10234489	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M
3300021374\|Ga0213881_10012967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3420	Open in IMG/M
3300021374\|Ga0213881_10043298	Not Available	1899	Open in IMG/M
3300021384\|Ga0213876_10689819	Not Available	543	Open in IMG/M
3300021401\|Ga0210393_10491705	Not Available	1002	Open in IMG/M
3300021401\|Ga0210393_11289560	Not Available	586	Open in IMG/M
3300021403\|Ga0210397_10021322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3984	Open in IMG/M
3300021405\|Ga0210387_11232667	Not Available	649	Open in IMG/M
3300021420\|Ga0210394_11537508	Not Available	562	Open in IMG/M
3300021432\|Ga0210384_11248987	Not Available	647	Open in IMG/M
3300021478\|Ga0210402_11989402	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_10430742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1464	Open in IMG/M
3300024347\|Ga0179591_1202981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1943	Open in IMG/M
3300025910\|Ga0207684_10946442	Not Available	722	Open in IMG/M
3300025914\|Ga0207671_10352888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300025915\|Ga0207693_10161341	Not Available	1764	Open in IMG/M
3300025916\|Ga0207663_10134264	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300025916\|Ga0207663_10241317	Not Available	1326	Open in IMG/M
3300025916\|Ga0207663_10886249	Not Available	713	Open in IMG/M
3300025916\|Ga0207663_11670792	Not Available	512	Open in IMG/M
3300026078\|Ga0207702_10197236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1864	Open in IMG/M
3300026118\|Ga0207675_100287464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1599	Open in IMG/M
3300026557\|Ga0179587_10979782	Not Available	557	Open in IMG/M
3300027725\|Ga0209178_1068477	Not Available	1155	Open in IMG/M
3300027725\|Ga0209178_1121168	Not Available	886	Open in IMG/M
3300027882\|Ga0209590_10536458	Not Available	755	Open in IMG/M
3300028047\|Ga0209526_10105401	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1983	Open in IMG/M
3300028782\|Ga0307306_10168522	Not Available	616	Open in IMG/M
3300028828\|Ga0307312_10677595	Not Available	683	Open in IMG/M
3300029636\|Ga0222749_10026292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2441	Open in IMG/M
3300031170\|Ga0307498_10149080	Not Available	774	Open in IMG/M
3300031199\|Ga0307495_10125513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300031544\|Ga0318534_10104367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1624	Open in IMG/M
3300031544\|Ga0318534_10212866	Not Available	1115	Open in IMG/M
3300031546\|Ga0318538_10050152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2036	Open in IMG/M
3300031713\|Ga0318496_10015262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3724	Open in IMG/M
3300031718\|Ga0307474_10905269	Not Available	698	Open in IMG/M
3300031718\|Ga0307474_11598985	Not Available	512	Open in IMG/M
3300031740\|Ga0307468_102313433	Not Available	522	Open in IMG/M
3300031764\|Ga0318535_10025213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2333	Open in IMG/M
3300031769\|Ga0318526_10286057	Not Available	674	Open in IMG/M
3300031833\|Ga0310917_10177530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1417	Open in IMG/M
3300032039\|Ga0318559_10334612	Not Available	704	Open in IMG/M
3300032043\|Ga0318556_10607537	Not Available	570	Open in IMG/M
3300032089\|Ga0318525_10656228	Not Available	534	Open in IMG/M
3300032180\|Ga0307471_101773255	Not Available	769	Open in IMG/M
3300032770\|Ga0335085_10099546	All Organisms → cellular organisms → Bacteria	3761	Open in IMG/M
3300032783\|Ga0335079_10046047	All Organisms → cellular organisms → Bacteria	5003	Open in IMG/M
3300032805\|Ga0335078_10002003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30852	Open in IMG/M
3300032805\|Ga0335078_10077787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4837	Open in IMG/M
3300032828\|Ga0335080_11312038	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300032828\|Ga0335080_12244570	Not Available	523	Open in IMG/M
3300032829\|Ga0335070_10043909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4967	Open in IMG/M
3300032892\|Ga0335081_11602421	Not Available	715	Open in IMG/M
3300032897\|Ga0335071_10263140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300032954\|Ga0335083_10211301	Not Available	1766	Open in IMG/M
3300033134\|Ga0335073_10039015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6446	Open in IMG/M
3300033134\|Ga0335073_10657345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300033158\|Ga0335077_11070132	Not Available	799	Open in IMG/M
3300033158\|Ga0335077_11171244	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300033158\|Ga0335077_11850674	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.33%
Host-Associated	Host-Associated	14.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.33%
Plants	Host-Associated → Plants	14.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.00%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.00%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.33%
Loam	Environmental → Terrestrial → Soil → Loam	18.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.33%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.00%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.00%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.33%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03480400	2199352024	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDQPTPAGAVSPLRKVEPL
C688J35102_1209836772	3300002568	Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVAARCLQMDAAASSRAVLCERLPDGTTLLVMPGPSELEQTPPADVISAVRKPAA*
Ga0066814_100048491	3300005162	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCVSMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPTPTEAVSPLRKVEPL*
Ga0070676_114114011	3300005328	Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLATPAGAVSPLRKVEPL*
Ga0066388_1062799631	3300005332	Tropical Forest Soil	MGVWLLLIVVVAAALVLWRVIDVAGTIWRERAHVTARCNQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPSAGAVAPLRKIEPR*
Ga0068868_1009281351	3300005338	Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKTWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL*
Ga0070668_1010783661	3300005347	Switchgrass Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPTDQDLATPDGAVSPLRKVEPL*
Ga0008090_155578311	3300005363	Tropical Rainforest Soil	MGLWLLLIVAVAATLVLWRVIDVAGKIRRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPTPAGAVSPLRKVEPL*
Ga0070709_102382532	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDPPTPAGAVSPLRKVEPL*
Ga0070709_102484452	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPADVIPAAGVIPAVRKPAA*
Ga0070714_1004864592	3300005435	Agricultural Soil	MTLWWMIIVVAATLVLWRVIGVAGEIWRERARVNARCAQMDAAALSGAMLCEQLPDGTTLLVMPSPAVQDQLERIPALPEIKTG*
Ga0070714_1016189752	3300005435	Agricultural Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEP
Ga0070714_1016983771	3300005435	Agricultural Soil	MTAWWLIAAVAVTLVLWRVIGVAGEIWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPVGPDQAVPDGTVPVLQEIKTG*
Ga0070714_1020660601	3300005435	Agricultural Soil	AIAGRNTCMGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0070713_1004841373	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPADVIPAAGVIPAVRKPAA*
Ga0070713_1014858921	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0070713_1015707612	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVRPPAGVLPAIRKPAA*
Ga0070710_103108742	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGVIPAAGVIPAVRKPAA*
Ga0070711_1012840922	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAISGAMLCERLPDGTTLLVMPGPPARPEQPEPAEILSTLREIKTR*
Ga0070705_1007093891	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IAGRTTCMGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMFCERLPDGTTVLVMPLPADQDLPTPAAAVSPLRKVEPL*
Ga0070694_1006178212	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL*
Ga0070708_1003033982	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVTGKIWRERARVTARCISMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPTPAGAVSPLRKVEPL*
Ga0068856_1001866283	3300005614	Corn Rhizosphere	MALWWLIAVTAGTLVMWRVIGVAGEIWRERARVNARCAQMDAAALSGAMLCEQLPDGTTLVVMPSPAAQDQPERVPALHEL*
Ga0068861_1010413622	3300005719	Switchgrass Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL*
Ga0066903_1043634072	3300005764	Tropical Forest Soil	MGVWLLLIVVVAATLVLWRVIDAAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDRPASAGAVTPLRKIEPR*
Ga0066652_1005692282	3300006046	Soil	MWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQDPLAEVIPPADVLPAIRKPAA*
Ga0070716_1012828142	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVIPSADMIPAIRKSAA*
Ga0070712_1000830362	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGVIQAAGVIPAVRKPAA*
Ga0070712_1011160372	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAISGAMLCERLPDGTTLLVMPGPPARPERPEPAEILSTLREIKTR*
Ga0074054_120817441	3300006579	Soil	LIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCVSMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPTPTEAVSPLRKVEPL*
Ga0079222_116566002	3300006755	Agricultural Soil	VLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0066659_109495012	3300006797	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMFCERLPDGTTLLVMPLPADQDLPTPAAAVSPLRKVEPL*
Ga0079221_102833352	3300006804	Agricultural Soil	MAMWLLILAVPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPSAEVIPPAGTIPAIGKSAA*
Ga0079220_101528043	3300006806	Agricultural Soil	MAMWLLILAAPATVILWRAIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPGGTTLLVMPGPAGPDQAPPAEVRPPGDVLPAIRKPAA*
Ga0075434_1001001684	3300006871	Populus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVAAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPA
Ga0075426_104807232	3300006903	Populus Rhizosphere	MAMWLLILAVPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPADVIPAAGVIPAVRRPAA*
Ga0075426_108738961	3300006903	Populus Rhizosphere	MAAWWLIAAVAVTLVLWRVIGVAGEIWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPAGPDLAVPEGTVPVLQEIKTG*
Ga0075424_1010605851	3300006904	Populus Rhizosphere	MAAWWLIAAVAVTLVLWRVIGVAGEIWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPAGPDQAVPDGTVPVLQEIKTG*
Ga0075436_1009090432	3300006914	Populus Rhizosphere	MAAWWLIAAVAVTLVLWRVIGVAGEVWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPAGPDQAVPDGTVPVLQEIKTG*
Ga0079219_108700071	3300006954	Agricultural Soil	MAMWLLILAVPATVILWRVISLAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPSAEVIPPAGTIPAIGKSAA*
Ga0075435_1018456812	3300007076	Populus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLP
Ga0099827_103242362	3300009090	Vadose Zone Soil	MGAWLLIVAVAVTLILWRVIGVAGTIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPTGQDQPALAEAISAVREVKSF*
Ga0105245_117617331	3300009098	Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEP
Ga0105243_109203322	3300009148	Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL*
Ga0105248_122578882	3300009177	Switchgrass Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0105237_115287982	3300009545	Corn Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCTSMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0105249_111927072	3300009553	Switchgrass Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAGSGAMFCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL*
Ga0126384_112676422	3300010046	Tropical Forest Soil	MGPWLLLIIAVAGTLVLWRVIDVTGKIWPERAHVTARCISMDAAAASGAMLCERLPDGTTLLVMPRPADQDRPAPAGAVSPLRKVEPL*
Ga0126378_104871882	3300010361	Tropical Forest Soil	MGVWLLLIVVVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGAVTPLRKIEPR*
Ga0126379_122032172	3300010366	Tropical Forest Soil	MGLWLLLIVAVAATLVLWRVIDVAGKIQRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPGGTVSPLRKIEPR*
Ga0134125_102112734	3300010371	Terrestrial Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLATPAGAVSPLRKVEPL*
Ga0134128_116728562	3300010373	Terrestrial Soil	MALWLLILAAPATVILWRVLGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVIPSAGMIPAIRKPAA*
Ga0134128_122575981	3300010373	Terrestrial Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTARCASMETAAASGAMLCERLPDGTTLLVMPRPADQDLPTLAGAVSPLRKVEPL*
Ga0134128_126713332	3300010373	Terrestrial Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVRGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0126381_1012559212	3300010376	Tropical Forest Soil	MGSWLLLIIAVAVTPVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGAVTPLRKIEPR*
Ga0134126_101384656	3300010396	Terrestrial Soil	MTAWWLIAAVAVTLVLWRVIGVAGEIWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPAGPDQAVPDGTVPVLQEIKTG*
Ga0134126_115118942	3300010396	Terrestrial Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPADPDQAPPADVIPAAGVIPAVRKPAA*
Ga0126347_11265112	3300010867	Boreal Forest Soil	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAMSGAMLCERLPDGTTLLVMPSPSARPEQPEPAEMIAPLREVRTR*
Ga0126350_113717292	3300010880	Boreal Forest Soil	MITWLLIAAVAVTLILWRAIGVAGAIWRERAHVNAHCTQMDAAAVTGTMLCERLPDGTTLLVMPSPVSPDQAASAGTTPALHEIKTG*
Ga0137364_100566094	3300012198	Vadose Zone Soil	MGSWLLLITAVAGTLVLWRVIDVAGKIWRERAHVTARCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0137383_100006077	3300012199	Vadose Zone Soil	MGAWLLIVAVAVTLILWRVIGVAGMIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPTGQDQPALAEAISAVREVKPF*
Ga0137380_100021532	3300012206	Vadose Zone Soil	MGAWLLIIAVAVTLILWRVIGVAGMIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPNGQDQPAQAETISACREIRSL*
Ga0137378_112081042	3300012210	Vadose Zone Soil	MGAWLLIIAVAVTLILWRVIGVAGMIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPNGQDQPAQTETISACREIRSL*
Ga0150985_1130749891	3300012212	Avena Fatua Rhizosphere	EQVEQREGEKRMAMWLLILAAPATVILWRVIGVAGAIWRERARVAARCLQMDAAASSRAVLCERLPDGTTLLVMPGPSELEQTPPADVISAVRKPAA*
Ga0137384_103186013	3300012357	Vadose Zone Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPEQAPSLELVPPPGVIPAVRKPAA*
Ga0137361_102782083	3300012362	Vadose Zone Soil	MGTWLLIVAVAVTLILWRVIGVAGMIWRERAHVTAHCIQMDAAASSGATLCERLPDGTTLLVMPGPTGQDQPALAEAISAVREIKPL*
Ga0137397_105637132	3300012685	Vadose Zone Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0137407_100259185	3300012930	Vadose Zone Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMFCERLPDGTTLLVMPRPTDQDQPTPAGAVSPLRKVEPL*
Ga0137410_109810402	3300012944	Vadose Zone Soil	WLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0164298_103647091	3300012955	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDPPIPAGAVSPLRKVEPL*
Ga0164299_101831352	3300012958	Soil	MGSWLLLIIAVAGTLVLWRVIDVAVKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL*
Ga0164302_103625382	3300012961	Soil	MGSWLLLIIAVAGTLVLWRMVDVAGKIWRERAHVTARCASMDAAAVSGAMLCERLPDGTTLLVMPWPGDQDQPTLAEAISPLRKIEPL*
Ga0157369_102859541	3300013105	Corn Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERARVTARCISMDAAAASGAMLCERLPDGTTLLVMPRPADQDLATPAGAVSPLRKVEPL*
Ga0134079_101930941	3300014166	Grasslands Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRLADQDLPTPAGAVSPLRKVEPL*
Ga0182036_111066661	3300016270	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRK
Ga0182041_104771741	3300016294	Soil	VCDSRKEDGMGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0182032_104089632	3300016357	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGRVSPLRKIEPR
Ga0182040_114290681	3300016387	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPA
Ga0187779_103725762	3300017959	Tropical Peatland	MGAWLLITVIAATIIAWRLIGVAGDLWRERAHVTARCIQMETAASSGAMLCERLPDGTTLLVMPGPAGREPPEPAGTISNLREIRPR
Ga0187778_110724932	3300017961	Tropical Peatland	MGAWLLIIVVAATIIAWRLIGVAGDLWRERAHVTARCIQMETAASSGAMLCERLPDGTTLLVMPGPAGREPPEPAGTISNLREIRPR
Ga0187766_101480792	3300018058	Tropical Peatland	MGAWLLIIVVAATIIAWRLIGVAGDLWRERAHVTARCIQMETAASSGAMLCERLPDGTTLLVMPEPAGREPPEPAGTISNLREIRPR
Ga0066662_100282042	3300018468	Grasslands Soil	MTMWLLILAAPATVILWRVIGVAGAIWRERARVAARCLQMDAAASSRAVLCERLPDGTTLLVMPGPSELEQIPPADVISAVRKPAA
Ga0193728_11164303	3300019890	Soil	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAISGAMLCERLPDGTTLLVMPSPPARPEQPEPAEILSTLREIKTR
Ga0210407_100648172	3300020579	Soil	MGSWLLLIIAVAVTPVLWRVIDVAGKIWRERAHVTARCASMDAAAVSGAMLCERLPDGTTLLVMPWPGDQDQPTLAEAISPLRKIEPL
Ga0210399_100319306	3300020581	Soil	MGSWLLLIIAVAVTPVLWRVIDVAGKIWRERARVTARCASMDAAAVSGAMLCERLPDGTTLLVMPWPGDQDQPTLAEAISPLRKIEPL
Ga0210404_100847802	3300021088	Soil	MGLWLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCASMDAAAVSGAMLCERLPDGTTLLVMPWPGDQDQPTLAEAISPLRKIEPL
Ga0210408_104725661	3300021178	Soil	MGLWLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCVSMDAAAVSGAMLCERLPDGTTLLVMPCPAGQDPRTPAGAISPLRKIEPL
Ga0210408_109490662	3300021178	Soil	TLVLWRVIDVAGKIWRERAHVTARCVSMDAAAVSGAMLCERLPDGTTLLVMPCPAGQDPRTPAGAVSPLRKIEPL
Ga0213882_102344891	3300021362	Exposed Rock	MAMWLLIVAAPATVILWRVIDVAGMIWRDRARVNARCVQMDAAAASGSMLCERLPDGTTLLVMPSPAGPEQTPPAEVIAAVRKPAA
Ga0213881_100129673	3300021374	Exposed Rock	MAMWLLILAAPATVILWRAIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVSPSADVLPAIRKPAA
Ga0213881_100432984	3300021374	Exposed Rock	MGVWLLIIVAAATIIAWRLIGVAGDLWRERAHVTARCVQMETAASSGAILCERLSDGTTLLVMPGPAGQEQPEPAGTISNLREIKPR
Ga0213876_106898191	3300021384	Plant Roots	KDKTAATARRKDGMAMWLLILAAPATVILWRAIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVSPSADVLPAIRKPAA
Ga0210393_104917052	3300021401	Soil	MGAWLLIIVAAVTVVLWRVISVAGMIWQERSRVTAHCTQMDAASTSGAMLCERRPDGTTLLVMPRPAGQEDGQTAEVIPMVREMKP
Ga0210393_112895602	3300021401	Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADSDQTPPAGVIPAVRKPAA
Ga0210397_100213222	3300021403	Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGLIPAAGVIPAVRKPAA
Ga0210387_112326671	3300021405	Soil	LIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL
Ga0210394_115375081	3300021420	Soil	TGCDSRREDGMGLWLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCVSMDAAAVSGAMLCERLPDGTTLLVMPCPAGQDPRTPAGAVSPLRKIEPL
Ga0210384_112489872	3300021432	Soil	MGLWLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCASMDAAAVSGAMLCERLPDGTTLLVMPCPADQDPRTPAGVISPLRKIEPL
Ga0210402_119894022	3300021478	Soil	EAGMTAWLPVIAVAATVILWRIIGVAGRIWRDRAQVTARCVQMDASAASGAMLCERLPDGTTLLVMPSPAGPDQPSSDGAVTTLRKPAA
Ga0126371_104307423	3300021560	Tropical Forest Soil	MGLWLLLIVAVAATLVLWRVIDVAGKIQRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPGGTVSPLRKIEPR
Ga0179591_12029812	3300024347	Vadose Zone Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVESL
Ga0207684_109464422	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDVTGKIWRERARVTARCISMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPTPAGAVSPLRKVEPL
Ga0207671_103528881	3300025914	Corn Rhizosphere	MGSWLLLLIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL
Ga0207693_101613414	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGVIQAAGVIPAVRKPAA
Ga0207663_101342641	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGVIPAAGVIPAVRKPAA
Ga0207663_102413171	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWWLIAAVAVTLVLWRVIGVAGEIWRERARVSAHCTQLDAAASSGAMLCERLPDGTTLLVMPNPVGPDQAVPDGTVPVLQEIKTG
Ga0207663_108862492	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL
Ga0207663_116707922	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAISGAMLCERLPDGTTLLVMPGPPARPEQPEPAEILSTLREIKTR
Ga0207702_101972362	3300026078	Corn Rhizosphere	MALWWLIAVTAGTLVMWRVIGVAGEIWRERARVNARCAQMDAAALSGAMLCEQLPDGTTLVVMPSPAAQDQPERVPALHEL
Ga0207675_1002874641	3300026118	Switchgrass Rhizosphere	MGSWLLLIIAVAGTLVLWRVIDIAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPTDQDLATPAGAVSPLRKVEPL
Ga0179587_109797821	3300026557	Vadose Zone Soil	VTLILWRVIGVAGTIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPTGQDQPALAEAISAVREVKPF
Ga0209178_10684771	3300027725	Agricultural Soil	WLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCVSMDAAAVSGAMLCERLPDGTTLLVMPCPAGQDPRTPAGAVSPLRKIEPL
Ga0209178_11211682	3300027725	Agricultural Soil	MWLLILAVPATVILWRVISLAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPSAEVIPPAGTIPAIGKSAA
Ga0209590_105364581	3300027882	Vadose Zone Soil	AAAGRGQGMGAWLLIVAVAVTLILWRVIGVAGTIWRERAHVTAHCVQMDAAASSGAMLCERLPDGTTLLVMPGPTGQDQPALAEAISAVREVKSF
Ga0209526_101054015	3300028047	Forest Soil	AGVIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPADPDQALSADVIPVAGVIPAVRKPAA
Ga0307306_101685221	3300028782	Soil	IAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPPSLPTFPVSPTW
Ga0307312_106775952	3300028828	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPPSLPTFPVSPTW
Ga0222749_100262922	3300029636	Soil	MGLWLLLTTAVAGTLVLWRVIDVAGKIWRERAHVTARCVSMDAAAVSGAMLCERLPDGTTLLVMPCPADQDPRTPAGVISPLRKIEPL
Ga0307498_101490802	3300031170	Soil	MGSWLLLIIAVAGTLVLWRVIDVAGKIWRERAHVTARCLSMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPTLAGAVSPLRKVEPL
Ga0307495_101255132	3300031199	Soil	MTAWLLIAAVAVTLILWRAIGVAGAIWRERAHVTAHCAEMDAAAISGAMLCERLPDGTTLLVMPSPPARPEQPEPAEILSALREIKPR
Ga0318534_101043672	3300031544	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0318534_102128662	3300031544	Soil	MGAWLLIIVIAATLIAWRLVSVAGMLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPANQDPPSSGEAISNVRQLKPL
Ga0318538_100501525	3300031546	Soil	LIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0318496_100152626	3300031713	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0307474_109052692	3300031718	Hardwood Forest Soil	VAGTLVLWRVIDVAGKIWRERAHVTAQCASMDAAAVSGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL
Ga0307474_115989852	3300031718	Hardwood Forest Soil	MAMWLLILAAPATVILWRVIGVAGAIWRERARVTARCVQMDAAAASRAVLCERLPDGTTLLVMPGPADPDQAPPAGVIPAAGVIPAVRKPAA
Ga0307468_1023134332	3300031740	Hardwood Forest Soil	WLLLIIAVAGTLALWRVIDVAGKIWRERAHVTAQCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDLPTPAGAVSPLRKVEPL
Ga0318535_100252136	3300031764	Soil	GMGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0318526_102860572	3300031769	Soil	MGVWLLTIVVASTIIAWRLTGVAGVLWRERAHVTARCIQMETAASSGAILCERLSDGTTLLVMPGPAGQEQPAPAGTISNLREIKPR
Ga0310917_101775301	3300031833	Soil	GMGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0318520_109027892	3300031897	Soil	MGLWLLLIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGTMLCERLPDGTTLLVMPRPADQE
Ga0318559_103346121	3300032039	Soil	LIVAVAATLVLWRVIDVAGTIWRERAHVTARCIQMDAAASSGAMLCERLPDGTTLLVMPRPADQDQPPPAGTVSPLRKIEPR
Ga0318556_106075372	3300032043	Soil	SMGAWLLIIVIAATLIAWRLVSVAGMLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPANQDPPSSGEAISNVRQLKPL
Ga0318525_106562282	3300032089	Soil	MGAWLLIIVIAATIIAWRLIGVAGDLWRERAHVTARCIQMETAASSGAMLCERLPDGTTLLVMPGPAGQEPPVPAGAISNLREIKQR
Ga0307471_1017732551	3300032180	Hardwood Forest Soil	VTVWLPVIAIAATVILWRIIGVAGRIWRDRAQVTARCVQMDASAASGAMLCERQADGTTLLVMPSPAGPDQLPSDGAVTTLRKPAA
Ga0335085_100995461	3300032770	Soil	MAMWLLILAAPATVILWRAIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVSPPAGVLPAIRKPAA
Ga0335079_100460472	3300032783	Soil	MGAWLLIIVVAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPGGTISSLREIKPL
Ga0335078_1000200311	3300032805	Soil	MGAWLLIIVVAATLIAWRLISVAGMLWKERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPASRDPSSSGGEISSVRELKPL
Ga0335078_100777877	3300032805	Soil	MGAWLLIIVAAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPGGTISSLREIKPL
Ga0335080_113120382	3300032828	Soil	MGAWLLIIVAAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPRGAISGLREIKPL
Ga0335080_122445701	3300032828	Soil	MGSWLLLIIAVAVTLVLWRVIDVAGKIWRERAHVTAHCASMDAAAASGAMLCERLPDGTTLLVMPRPADQDQPVPAGAASPLRKIEPL
Ga0335070_100439093	3300032829	Soil	MSVWLLMLAAPATVVLWRVISVVGAIWRERARVNARCAQMDAAASSGAMLCERLPDGTTLLVMPGPAGQVPPAEVVPVIRKPAA
Ga0335081_116024211	3300032892	Soil	MGAWLLIIVVAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPGGTVSSLREIKPL
Ga0335071_102631402	3300032897	Soil	MSVWLLMLAAPATVVLWRVISVVGAIWRERARVNARCAQMDAAASSGAMLCERLPDGTTLLVMPGMPGQAQARQAEPVPAGTIPAGTIP
Ga0335083_102113011	3300032954	Soil	LWRAIGVAGAIWRERARVTARCVQMDAAASSRAVLCERLPDGTTLLVMPGPAGPDQAPLAEVSPPAGVLPAIRKPAA
Ga0335073_100390151	3300033134	Soil	MGAWLLIIVVAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPGGTVSGLREIKPL
Ga0335073_106573451	3300033134	Soil	MAIWLLILAAPATVILWRVIGVAGTIWRERARVTARCVQMDAAASSGAVLCERLPDGTTLLVMPGMPGQAQARQAEPVPAGTIPAGTIPGSAGPANVIPAVRKTAA
Ga0335077_110701322	3300033158	Soil	IAIAGRRHDMGAWLLIIVVAATIIAWRLIGVAGDLWRERAHVTARCIQMETAASSGAMLCERLPDGTTLLVMPGPAGREPPEPAGTISNLREIRPR
Ga0335077_111712441	3300033158	Soil	MGAWLLIIVAAATLIAWRLISVAGTLWRERAHVTARCVQMETAASSGAILCERLPDGTTLLVMPGPAGQDQASPGGTISSL
Ga0335077_118506741	3300033158	Soil	VFPGDCIAWLEAGIGNARQRGDAMAVWLLIAAVAATLTVWRVIDVAGVIWRERAHVTAHCAQLDAAASSGATLCERLPDGTTLLVMPGPATPDQLAPAETISTLRKIKTR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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