Metagenome Family F047290

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047290
Family Type	Metagenome
Number of Sequences	150
Average Sequence Length	58 residues
Representative Sequence	SMSDIGRKLLQAVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQGLTIDQDD
Number of Associated Samples	107
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.25 %
% of genes near scaffold ends (potentially truncated)	82.67 %
% of genes from short scaffolds (< 2000 bps)	92.00 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.333 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.85% β-sheet: 0.00% Coil/Unstructured: 48.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00239	Resolvase	20.67
PF02796	HTH_7	18.67
PF00589	Phage_integrase	14.67
PF07508	Recombinase	4.00
PF04218	CENP-B_N	4.00
PF13936	HTH_38	3.33
PF13384	HTH_23	1.33
PF03592	Terminase_2	1.33

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	24.67
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	20.67
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.33 %
Unclassified	root	N/A	10.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.33 %
Unclassified	root	N/A	10.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.33 %
Unclassified	root	N/A	10.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.33 %
Unclassified	root	N/A	10.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.00 %
Unclassified	root	N/A	10.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.67 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	72.67 %
Unclassified	root	N/A	10.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	70.67 %
Unclassified	root	N/A	10.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.67 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.00 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	70.67 %
Unclassified	root	N/A	10.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.67 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.00 %
Trichocoleusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Trichocoleusaceae	0.67 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	70.67 %
Unclassified	root	N/A	10.67 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.00 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.33 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.67 %
Trichocoleus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Trichocoleusaceae → Trichocoleus	0.67 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.67 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	0.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	70.67 %
Unclassified	root	N/A	10.67 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.00 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.33 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	0.67 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.67 %
Trichocoleus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Trichocoleusaceae → Trichocoleus	0.67 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100533530	All Organisms → cellular organisms → Bacteria → Proteobacteria	1317	Open in IMG/M
3300002911\|JGI25390J43892_10092106	Not Available	679	Open in IMG/M
3300004479\|Ga0062595_102319710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300004479\|Ga0062595_102531453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300005187\|Ga0066675_11143723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300005332\|Ga0066388_101094454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1348	Open in IMG/M
3300005332\|Ga0066388_105522714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	640	Open in IMG/M
3300005332\|Ga0066388_105565890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300005332\|Ga0066388_107392849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	551	Open in IMG/M
3300005332\|Ga0066388_107801711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300005435\|Ga0070714_101290382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	713	Open in IMG/M
3300005435\|Ga0070714_101870201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300005447\|Ga0066689_10540664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300005457\|Ga0070662_100449510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300005468\|Ga0070707_101367266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300005536\|Ga0070697_100114122	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300005539\|Ga0068853_101382120	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005556\|Ga0066707_10424208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300005598\|Ga0066706_11410926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005713\|Ga0066905_100359573	Not Available	1166	Open in IMG/M
3300005713\|Ga0066905_100509131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300005713\|Ga0066905_101462483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300005764\|Ga0066903_100943592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1568	Open in IMG/M
3300005764\|Ga0066903_101903234	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005764\|Ga0066903_105316306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300005764\|Ga0066903_105385983	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005764\|Ga0066903_106230003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300005764\|Ga0066903_107009489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300005764\|Ga0066903_107790113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300005764\|Ga0066903_108074535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300005764\|Ga0066903_108232725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300005764\|Ga0066903_108889236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300005764\|Ga0066903_109092341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300006049\|Ga0075417_10607981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300006172\|Ga0075018_10365583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300006175\|Ga0070712_100766369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300006755\|Ga0079222_11907792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300006854\|Ga0075425_102051936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300006903\|Ga0075426_11417182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300006904\|Ga0075424_101302416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300006904\|Ga0075424_102477152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	544	Open in IMG/M
3300009094\|Ga0111539_11818141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300009100\|Ga0075418_11129444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300010046\|Ga0126384_11970998	Not Available	558	Open in IMG/M
3300010047\|Ga0126382_10296790	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010047\|Ga0126382_10765092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300010321\|Ga0134067_10187916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300010359\|Ga0126376_12523388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300010360\|Ga0126372_10776975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300010360\|Ga0126372_12008583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300010360\|Ga0126372_12246362	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010361\|Ga0126378_11911802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300010362\|Ga0126377_10546373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1196	Open in IMG/M
3300010362\|Ga0126377_10592669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1152	Open in IMG/M
3300010362\|Ga0126377_10962020	Not Available	919	Open in IMG/M
3300010366\|Ga0126379_10103654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2538	Open in IMG/M
3300010366\|Ga0126379_13466624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010371\|Ga0134125_13140962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300010398\|Ga0126383_10239452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1772	Open in IMG/M
3300010398\|Ga0126383_11013154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	919	Open in IMG/M
3300010868\|Ga0124844_1141110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300010868\|Ga0124844_1261766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300012198\|Ga0137364_10193474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1488	Open in IMG/M
3300012199\|Ga0137383_10965086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300012200\|Ga0137382_11358212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300012202\|Ga0137363_11233344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Trichocoleusaceae → Trichocoleus	635	Open in IMG/M
3300012206\|Ga0137380_10490102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300012207\|Ga0137381_11069422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300012209\|Ga0137379_11523979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300012349\|Ga0137387_10874391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300012353\|Ga0137367_10947447	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012354\|Ga0137366_10723976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300012356\|Ga0137371_10777253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300012359\|Ga0137385_11251966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300012361\|Ga0137360_10524835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300012500\|Ga0157314_1054839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300012929\|Ga0137404_10560689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024	Open in IMG/M
3300012929\|Ga0137404_11854118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	561	Open in IMG/M
3300012930\|Ga0137407_11345138	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012971\|Ga0126369_10920960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300012971\|Ga0126369_11875422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300013297\|Ga0157378_10672329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300015373\|Ga0132257_104009843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300015374\|Ga0132255_101115512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300016341\|Ga0182035_10251001	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300016371\|Ga0182034_10055921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2633	Open in IMG/M
3300016422\|Ga0182039_10068756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2495	Open in IMG/M
3300016445\|Ga0182038_10740119	Not Available	859	Open in IMG/M
3300016445\|Ga0182038_12187510	Not Available	501	Open in IMG/M
3300017657\|Ga0134074_1200356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300018431\|Ga0066655_10721348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300018433\|Ga0066667_11621522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300018482\|Ga0066669_10654628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	924	Open in IMG/M
3300019789\|Ga0137408_1361120	Not Available	6525	Open in IMG/M
3300021479\|Ga0210410_11575061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300021560\|Ga0126371_12619146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300025915\|Ga0207693_10327820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300025915\|Ga0207693_11184916	Not Available	577	Open in IMG/M
3300025922\|Ga0207646_11784666	Not Available	526	Open in IMG/M
3300025932\|Ga0207690_11235639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300025934\|Ga0207686_10652174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300026326\|Ga0209801_1314936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	554	Open in IMG/M
3300026523\|Ga0209808_1144170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300026524\|Ga0209690_1108810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1118	Open in IMG/M
3300026532\|Ga0209160_1127186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1236	Open in IMG/M
3300026551\|Ga0209648_10775921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300027874\|Ga0209465_10662906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300031544\|Ga0318534_10403872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300031545\|Ga0318541_10146131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1295	Open in IMG/M
3300031564\|Ga0318573_10246048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300031573\|Ga0310915_10892985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	623	Open in IMG/M
3300031682\|Ga0318560_10515476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300031719\|Ga0306917_10546885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300031744\|Ga0306918_11254638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300031751\|Ga0318494_10538209	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031779\|Ga0318566_10254514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300031779\|Ga0318566_10519876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031793\|Ga0318548_10246124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300031798\|Ga0318523_10623609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031805\|Ga0318497_10096751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1580	Open in IMG/M
3300031833\|Ga0310917_10871426	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031833\|Ga0310917_11079741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300031835\|Ga0318517_10561234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031845\|Ga0318511_10033100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1988	Open in IMG/M
3300031879\|Ga0306919_10930161	Not Available	666	Open in IMG/M
3300031890\|Ga0306925_11252607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300031910\|Ga0306923_10742143	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300031910\|Ga0306923_11043200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300031910\|Ga0306923_12410575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300031942\|Ga0310916_11353630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031945\|Ga0310913_10843518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300031945\|Ga0310913_10905256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300031946\|Ga0310910_10288385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1289	Open in IMG/M
3300031946\|Ga0310910_10474994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	992	Open in IMG/M
3300031947\|Ga0310909_11575302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	521	Open in IMG/M
3300031954\|Ga0306926_10071391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4203	Open in IMG/M
3300031954\|Ga0306926_11971312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300031954\|Ga0306926_12755141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300032010\|Ga0318569_10246878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300032044\|Ga0318558_10346222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300032052\|Ga0318506_10354776	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300032055\|Ga0318575_10417253	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300032059\|Ga0318533_10257601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300032261\|Ga0306920_102281212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.33%
Host-Associated	Host-Associated	10.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.67%
Plants	Host-Associated → Plants	10.67%
Aquatic	Environmental → Aquatic	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.67%
Sediment	Environmental → Aquatic → Sediment	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.67%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1005335302	3300000364	Soil	MQDVGRKLLQSVGXREPDDASIAAAIEANDXFIDRLTAIRDKAQALTIDRDD*
JGI25390J43892_100921061	3300002911	Grasslands Soil	KQAKSMTDIGRKLLQSVGFHEPDDASIKAAIEANDAFIDRLTAIRDAAPTLAVERDE*
Ga0062595_1023197102	3300004479	Soil	QDFSTANSMQDIGRKLLQSVGFASPDDVSIQGAIEANDAFVARLEEIRDKAHGLTIEQDD
Ga0062595_1025314532	3300004479	Soil	ESLLDFATANSMQDIGRKLLQAVGFASPDDVSIQAAIEANDAFIAQLEQIRDRAQQLTLTHSG*
Ga0066675_111437231	3300005187	Soil	PAQDFSTANSMHEIGKRLLQSVGFTEPDDASIQAAIEANDSFIARLETIRDGAQGLTIELKLQK*
Ga0066388_1010944541	3300005332	Tropical Forest Soil	SVDQPPNTSVDFSSAKSMQDIGRKLMQSVGFASPDDASIQAAIEANDAFIDRLQAIRDAAQGLMLEHED*
Ga0066388_1055227141	3300005332	Tropical Forest Soil	DFKQARSMTDIGRKLLQSVGFREPDDASIKAAIEANDAFIDRLTAIRDAAQALTDVDEDMGKD*
Ga0066388_1055658901	3300005332	Tropical Forest Soil	QPPNTSVDFSSANSMQDIGRKLLQSIGFAEPDDASVQEAVEANNILIDRLQQIKAEAEGQLQ*
Ga0066388_1073928492	3300005332	Tropical Forest Soil	QLDYNTCQSMQEIGCKLLQSVGFASPDDVSIAEALEANDAFIQRLEAIRDGAQGLTIEPSD*
Ga0066388_1078017111	3300005332	Tropical Forest Soil	PLDFATANSMQDIGRKLLQSIGFAEPNDASIAAAIEANDAFIDALHSIRDRAQTLTIGQS
Ga0070714_1012903822	3300005435	Agricultural Soil	DVGRKLLQSVGFSQPDDASIQAAIEANDAFIERLEAIRNAAQGPGIDQDQE*
Ga0070714_1018702011	3300005435	Agricultural Soil	MPDEAPKPIDFAKANSMQDIGRKLLQSVGFALPDDVSIAAAIKANDAFVARLEEIRDKAQGLTIDQDD*
Ga0066689_105406641	3300005447	Soil	MQDVGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQD
Ga0070662_1004495104	3300005457	Corn Rhizosphere	IDQHAVVAAQDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVVRLEAIRNSAQGLTIDQDD*
Ga0070707_1013672661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRKLLQSVGFHEPDDASIKAAIEANDAFIDRLTAIRDAAPTLAVERDE*
Ga0070697_1001141221	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GHIKPDETSPQDFSSAKSMEDVGRKLLQSVGFASPDDASIQAAIEANDAFIDRLQAIRDGAQGLTIDQGTD*
Ga0068853_1013821203	3300005539	Corn Rhizosphere	LLNMMPDEAPKPIDFAKANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRRKAQGLTIEQDE*
Ga0066707_104242082	3300005556	Soil	NDTNEPNHIDFKQAKSMQDVGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD*
Ga0066706_114109261	3300005598	Soil	MQDVGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD*
Ga0066905_1003595733	3300005713	Tropical Forest Soil	DIGKRLLQSFGVREPDDVSIQLAIEANDAFIDRLKAISEAAQGLPREHED*
Ga0066905_1005091312	3300005713	Tropical Forest Soil	MQDIGRKLLQSVGFSEPDDVSIQAAIGANDAFIERLEAIRDRAQRLT*
Ga0066905_1014624832	3300005713	Tropical Forest Soil	QSLQDIGRKLLQSVGFQEPDDVSIQAAIEANDTFIAALEAIRDSAQGLTLDQDD*
Ga0066903_1009435924	3300005764	Tropical Forest Soil	TDIGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQGLTIEQDDD*
Ga0066903_1019032342	3300005764	Tropical Forest Soil	MQDIGRKLLQSVGFASPDDASIQAAIEANDAFVGRLEAIRAAAQGLTLVQDD*
Ga0066903_1053163062	3300005764	Tropical Forest Soil	PIDAPDPNHIDFKSARSMQDIGRKLLQSVGFKEPDDVSVQAAIEANDAFIDRLQQIRDSAQGLTLQQNED*
Ga0066903_1053859831	3300005764	Tropical Forest Soil	TDFASAKSMTDIGRKLLQSVGFSSPDDASIAAAIEANDAFIRRLEEISATAQGFTIDQDD
Ga0066903_1062300032	3300005764	Tropical Forest Soil	SMQDIGRKLLQSIGFASPDDASIQAAVEANDAFVARLEEICRKAQGHMIEQDD*
Ga0066903_1070094891	3300005764	Tropical Forest Soil	ILDQPPPSNSIEFSSANSMHEIGKRLLQAVGFASPDDASLQAAIEANDVFVARLEAIRDAAQALTRAG*
Ga0066903_1077901132	3300005764	Tropical Forest Soil	PNTDFATANSMQDIGRKLLQSIGFSSPDDASVQAAIEANDAFVAKLEVIRDAAQGLTID*
Ga0066903_1080745352	3300005764	Tropical Forest Soil	MQDIGRKLLQSVGLASPDAVSVAAAIEANDAFIARLEAIRDQAQGAMQ*
Ga0066903_1082327252	3300005764	Tropical Forest Soil	MQDIGRKLLQSIGFREPDDVSIQAAIEANNAFIAQLEAIRRQAQGLTIDQDDD*
Ga0066903_1088892361	3300005764	Tropical Forest Soil	DIGRKLMQSVGFASPDDASIQAAIEANDAFIDRLQAIRDGAQGLTIDQG*
Ga0066903_1090923411	3300005764	Tropical Forest Soil	IGKKLLQSIGFASPDDVSIQAAIEANDAFIERLEAIRDAGPTIEQ*
Ga0066652_1020854632	3300006046	Soil	VPDFQQANSMEDIGRKLLQSVGFDSPDDASIRAAIEANDSFIARLERIRDSAQGLTIDLKMQK*
Ga0075417_106079812	3300006049	Populus Rhizosphere	PNTSVDFKRAKSMQDIGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD*
Ga0075018_103655831	3300006172	Watersheds	MTDIGRKLLQSVGFHEPDDASIKAAIEANDAFIDRLTAIRDAAQTLAVERDE*
Ga0070712_1007663692	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVGRLEAIRNSAQGLTIDQDD
Ga0079222_119077922	3300006755	Agricultural Soil	DEAPKPIDFAKANSMQDIGCKLLQSVGFASPDDVSIAAAIEANDAFVARLEEIRDKAQGLTIDQHD*
Ga0066659_113458381	3300006797	Soil	QQANSMEDIGRKLLQSVGFDSPDDASIRAAIEANDSFIARLERIRDSAQGLTIDLKMQK*
Ga0075425_1020519362	3300006854	Populus Rhizosphere	QDIGRKLLQSVGFADDASIQAAIDANDAFVARLEEIRDKAQGLTIEQDD*
Ga0075426_110123752	3300006903	Populus Rhizosphere	FNSAQSMQDIGRMLLQSIGFSEPDDVSVAAAVEANDTFIAALEAIRDRAQRLTIE*
Ga0075426_114171822	3300006903	Populus Rhizosphere	LNMMPDEAPKPIDFAKANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRRKAQGLTIEQDE*
Ga0075424_1013024161	3300006904	Populus Rhizosphere	ANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRRKAQGLTIEQDE*
Ga0075424_1024771522	3300006904	Populus Rhizosphere	LQSVGFHEPDDASIKAAIEANDAFIDRLTAIRDAAQTLAVERDE*
Ga0111539_118181411	3300009094	Populus Rhizosphere	KANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRDKAHGLTIAQDD*
Ga0075418_111294441	3300009100	Populus Rhizosphere	VVAAQDFSTANSMQDIGRKLLQSVGFASPDDVSIQGAIEANDAFVARLEEIRDKAHGLTIAQDD*
Ga0126384_119709981	3300010046	Tropical Forest Soil	MPEIGKKLLQSIGFQEPDDVSIAAAVEANDVFVSRLEAIRDAAQGATEQND*
Ga0126382_102967904	3300010047	Tropical Forest Soil	QDIGRKLLQSVGFASPDDVSIQAAIEANDAFIARLEAIRNSAQGLTLEQ*
Ga0126382_107650921	3300010047	Tropical Forest Soil	MYDIGKRLLQSMGLREPDDVSIQLAIEANDAFIDRLKAISEAAQGLPREHED*
Ga0134067_101879161	3300010321	Grasslands Soil	TSVDFSSANSMQDIGRLQSVGFASPDDPSIQAAIEANDAFIARLEAIRDAAQALTIDQDDYVVAPLPLAKC*
Ga0126376_125233882	3300010359	Tropical Forest Soil	MQDIGRKLLQSVGFREPDDVSIAAAIEANDAFIERLEAIRDEAGQTIDDDD*
Ga0126372_107769753	3300010360	Tropical Forest Soil	MNDIGKKLLQSIGFKEPDDVSIAAAIEANDAFIARLEAIRDAAQGLTIEQDWPLRSQ*
Ga0126372_120085832	3300010360	Tropical Forest Soil	MTDIGRKLLPSVGFREPDDASIKAAIEANDAFIDRLTAIRDAAQALTDVDEDMGKD*
Ga0126372_122463622	3300010360	Tropical Forest Soil	ANSMQDIGRKLLQSVGFREPDDVSIAAAIEANDAFIERLEAIRDEAAQPIDDDD*
Ga0126378_119118022	3300010361	Tropical Forest Soil	FNSAKSMTDIGRKLLQAVGFKEPDDVSIAAAIEANNAFIAQLEAIRQQAQGLTIDQG*
Ga0126377_105463732	3300010362	Tropical Forest Soil	LNIIHAPKPNTDFATANSIQDIGRKLLQSIGFSSPDDASVQAAIEANDAFVAKLEVIRDAAQGLTID*
Ga0126377_105926692	3300010362	Tropical Forest Soil	MQDIGRKLLHSVGFREPDDVSIAAAIEANDAFIERLEAIRDEAGQTIDDDD*
Ga0126377_109620202	3300010362	Tropical Forest Soil	QDIGRKLMQSVGLREPNDVSIQAAIEANDAFIERLEAIRDRAQTLTIK*
Ga0126379_101036541	3300010366	Tropical Forest Soil	RVFGHLNETTECAPTDFASAKTMTDIGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQGLTIEQDDD*
Ga0126379_134666242	3300010366	Tropical Forest Soil	FSSANSMQDIGRKLLQSIGFASPDDVSIAAAVEANDAFVARLEEIRRKAQGLTIDSG*
Ga0134125_131409621	3300010371	Terrestrial Soil	NLVIDQHAVVAAQDFSTANSMQDIGRKLLQSVGFVSPDNLSIAAAIEANDAFVARLEEIRRKAQGLTIEQDE*
Ga0126383_102394522	3300010398	Tropical Forest Soil	VKNGNPNPNNIDFTTANSMQDIGRKLLQSLGFREPDDLSIQAAIEANDAFIKRLEAIREAAQRPTIEQ*
Ga0126383_110131542	3300010398	Tropical Forest Soil	MQDIGRRLLQSVGFASPDDASIQKAIEVNDIFVAALEAIRDKALGTIELDD*
Ga0124844_11411102	3300010868	Tropical Forest Soil	IDFNSAQSMTDIGRKLLQAVGFKEPDDVSIQAAIEANDAFIERLEAIRDAQRPTIEQ*
Ga0124844_12617661	3300010868	Tropical Forest Soil	RLQLSTIHVTDIGRKLLQAVGFKEPDDVSIQAAIEANDAFIERLEAIRDAQRPTIEQ*
Ga0137364_101934743	3300012198	Vadose Zone Soil	SMQDIGRKLLQSVGFASPDDVSVAAAIEANDLFIAKLEAIRDSAQRLTLDRD*
Ga0137383_109650861	3300012199	Vadose Zone Soil	SMTDVGRKLLQSVGFREPDDASINAAIEANDAFIDRLTAIRDAAQTLAVERDE*
Ga0137382_113582121	3300012200	Vadose Zone Soil	RLLQSIGFALPDDVSIQAAIEANDAFIARLEAIRDGAKGLTIDQ*
Ga0137363_112333441	3300012202	Vadose Zone Soil	LLTEGEQPNKIDFNQANSMTDIGRKLLQSVGFASPDAASVQEAVELNDRFIAQLLEIRDRAQRLTIDQDD*
Ga0137380_104901021	3300012206	Vadose Zone Soil	SMSDIGRKLLQAVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQGLTIDQDD*
Ga0137381_110694221	3300012207	Vadose Zone Soil	DPEPNKLDFNTAKSMQDIGRKLLQSVGFASPDDASIAAAIEANDAFVERLEAIRDAAQGFTIDQDD*
Ga0137379_115239791	3300012209	Vadose Zone Soil	KILGITDKPQTERIDWNTTTSMRDIGCKLLQSVGFAQPDDVSIQAAIEANNAFIAQLEQIRDSAQRLTIE*
Ga0137387_108743912	3300012349	Vadose Zone Soil	MQDIGKKLLQSVGFASPDDVSIQAAIEANDVFIAQLEQIRDRAQQLTL
Ga0137367_109474472	3300012353	Vadose Zone Soil	LGIVDKPQSERIDWNTTTSMRDIGSKLLQSVGFATPDDASIQQAIEANDVFIAQLEQIRDRAQGLTIDQG*
Ga0137366_107239762	3300012354	Vadose Zone Soil	HDMGVKLLQSVGFASPDDVSIQAAIEANDQFIAALEQIRDRAQTLTLDQA*
Ga0137371_107772531	3300012356	Vadose Zone Soil	DQHALVTAQDFSTANSMHELGKRLLQSVGFASPDDASIVAAIEANDAFVERLEAIRNAAGFTIDQDDD*
Ga0137385_112519661	3300012359	Vadose Zone Soil	TNEPNHIDFKQAKSKQDVGRKLLQRVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD*
Ga0137360_105248352	3300012361	Vadose Zone Soil	MNDPEPNKLDFATANSMHDMGRKLLQSVGFASPDDVSIQAAIEANDAFVGRLEAIRDRAQTLTIE*
Ga0157314_10548391	3300012500	Arabidopsis Rhizosphere	SAKPIDFAQANSMQDIGRKLLQSVGFASPDDVSIKAAIEANDAFIGRLEAIRDNAQRLTINQD*
Ga0137404_105606892	3300012929	Vadose Zone Soil	MQDIGRKLLQSVGFASPDDVSIQAAIEANDAFIARLEAIRDGAKGLTTDQ*
Ga0137404_118541182	3300012929	Vadose Zone Soil	FETAKSMQDVGRKLLQSGGFREPDDASIQAAIEANDAFIERLEAIRDAAQGPALDHED*
Ga0137407_113451382	3300012930	Vadose Zone Soil	RGDRGNRESIGFSEPDDVSIQAAIEANDAFIERLEAIRDSAQGLTIDQGTD*
Ga0126369_109209602	3300012971	Tropical Forest Soil	FHRIDTPQDTQQDFNSAKSMTDIGRKLLQAVGFKEPDDVSIAAAIEANNAFIAQLEAIRQQAQGLTIDQG*
Ga0126369_118754223	3300012971	Tropical Forest Soil	MQDIGRRLLQSVGFASPDDASIQKAIEVNDIFVAALEAIRDKALGTIEL
Ga0157378_106723293	3300013297	Miscanthus Rhizosphere	AQDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVVRLEAIRNSAQGLTIDQDD*
Ga0132257_1040098432	3300015373	Arabidopsis Rhizosphere	RLLNMMPDEVLKPIDFAKANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRDKAHGLTIE*
Ga0132255_1011155122	3300015374	Arabidopsis Rhizosphere	GRKLLQSVGFASPDDVSIKAAIKANDAFIDRLEAIRDNAQRLTINQD*
Ga0182035_102510013	3300016341	Soil	TQQIDFKQAKNMQDLGRKLLQTVGFREPDDASIAAAIEANDAFIDRLTAIRDKAQALTIDRDD
Ga0182034_100559213	3300016371	Soil	MTDVGRKLLQSVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0182039_100687561	3300016422	Soil	KLLQSVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0182038_107401192	3300016445	Soil	GKKLLQSIGFASPDDVSIQAAIEANDQFIRRLEAIRDAAQELTIEQD
Ga0182038_107693062	3300016445	Soil	SQASSMQDIGRKLLQSVGFKEPDDVSIQAAIEANDAFIDRLKAIRDSAQGLTLEQ
Ga0182038_121875101	3300016445	Soil	DVGRKLLESVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0134074_12003561	3300017657	Grasslands Soil	DIGRKLLQSVGFHEPDDASIKAAIEANDAFIDRLTAIRDAAPTLAVERDE
Ga0066655_107213481	3300018431	Grasslands Soil	MHEIGKRLLQSVGCTEPDDASIQAAIEANDAFIARLETIRDGAQGLTIELKLQK
Ga0066667_116215221	3300018433	Grasslands Soil	PAQDFSTANSMHEIGKRLLQSVGFTEPDDASIQAAIEANDSFIARLETIRDKAQGLPIELKMQK
Ga0066669_106546283	3300018482	Grasslands Soil	NSMQDIGRKLLQSVGFASPDDVSIEAAIAANDSFIARLEAIRDAAQALTINQDG
Ga0137408_13611208	3300019789	Vadose Zone Soil	MKTKLDFKTAKSMQDVGRKLLQSVGFASPDDASIEAAIEANDTFVAELERILDAAQGR
Ga0210410_115750612	3300021479	Soil	QHTVVAAQDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVGRLEAIRNSAQGLTIDQDD
Ga0126371_126191461	3300021560	Tropical Forest Soil	SMQDIGRKLLQSVGFASPDDASIQAAVEANDAFVGRLDAIRAAAQGLTIEQDD
Ga0207693_103278201	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LNLVIDQHAVVAAQDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVGRLEAIRNSAQGLTIDQDD
Ga0207693_111849162	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TEEQDAPNKLDFATANSLHEIGERLLQSVGFREPDDVSIQAAIEANDVLIATLEAIRDAAQGLTIE
Ga0207646_117846662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRDIGLKLLQSVGFRDPDEDSIQAALQANDIFIAKLEAIRDCAQAPEEEIH
Ga0207690_112356391	3300025932	Corn Rhizosphere	VLGKARLLNMMPDEAPKPIDFAKANSMQDIGCKLLQSVGFASPDNLSIAAAIEANDAFVARLEEIRRKAQGLTIEQDE
Ga0207686_106521742	3300025934	Miscanthus Rhizosphere	LVIDQHAVVAAQDFSTANSMQDIGRKLLQSVGFASPDDASINAAIEANDAFVGRLEAIRNSAQGLTIDQDD
Ga0209801_13149362	3300026326	Soil	AKSMQDVGRKLLQSVGFREPDDASIQAAIEANDAFIERLEAIRNAAQGPMIDQDEE
Ga0209808_11441701	3300026523	Soil	IGRKLLQSVGFDSPDDLSIAAAIEANDSFIARLETIRDSARGRTIDLQK
Ga0209690_11088101	3300026524	Soil	MQDVGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD
Ga0209160_11271861	3300026532	Soil	KQAKSMQDVGRKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRGAAQGRMIDQDD
Ga0209648_107759213	3300026551	Grasslands Soil	QDFNSAQSMNDIGRKLLQSIGFTQPDDLSVAAAVEANNAFIERLEAIRNRAQGLTIDQDD
Ga0209465_106629062	3300027874	Tropical Forest Soil	RILNIIPDEGTKPIDFATATSMQDIGRKLLQSVGFALPDNASIAEAVEANDAFVDRLQEIRARAQGLTLEQKD
Ga0318534_104038721	3300031544	Soil	TDIGRKLLQSVGFASPDDHSIQAAVEANDTFIDRLKAISEAAQGRTLDQDD
Ga0318541_101461311	3300031545	Soil	IDFDAARSMTDIGRKLLQSVGFASPDDHSIQAAVEANDTFIDRLKAISEAAQGRTLDQDD
Ga0318573_102460482	3300031564	Soil	FNTAQSMQDIGKKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQRPTIEQ
Ga0310915_102551021	3300031573	Soil	SQASSMQDIGRKLLQSVGFKEPDDVSIQQAIQANDAFIDRLKAIRDAAQGLSLEHEE
Ga0310915_108929852	3300031573	Soil	FNSAQSMQDLGKKLLQSIGFASPDDVSIQAAIEANDQFIRRLEAIRDAAQELTIEQD
Ga0318560_105154762	3300031682	Soil	SMQDIGKKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQRPTIEQ
Ga0306917_105468852	3300031719	Soil	QSMQDLGKKLLQSIGFASPDDVSIQAAIEANDQFIRRLEAIRDAAQELTIEQD
Ga0306918_112546382	3300031744	Soil	GKKLLQSVGFASPDDVSIQAAIEANDAFIERLEAIRDAAQRPTIEQ
Ga0318494_105382092	3300031751	Soil	FTDDDKPAVDFASANSMQDIGRKLLQSVGFREPDDVSIAAAIEANHAFIERLEAIRDEAGQTIDDDD
Ga0318566_102545141	3300031779	Soil	MTDIGRKLLQSVGFASPDDHSIQAAVEANDTFIDRLKAISEAAQGRTLDQDD
Ga0318566_105198761	3300031779	Soil	KSARSMQDIGRKLLQSVGFKEPDDVSIQAAIEANDAFIDRLKAIHDGAQGLTLER
Ga0318548_102461242	3300031793	Soil	ASSMQDIGRKLLQSIGFKEPDDVSIQAAIEANDAFIDRLKAIRDSAQGLTLEQ
Ga0318523_106236091	3300031798	Soil	QDIGRKLLQSVGFREPDDVSIAAAIEANHAFIERLEAIRDEAGQTIDDDD
Ga0318497_100967511	3300031805	Soil	SMQDIGRKLLQSVGFREPDDVSIQAAIEANDAFIARLEVIRDRAQGLTLEHKD
Ga0310917_108714262	3300031833	Soil	FKQARSMTDVGRKLLQSVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0310917_110797411	3300031833	Soil	DDTDTNHIDFNSAQSMTDIGRKLLQAVGFNEPDDVSIQAAIEANDAFVERLEAIRDNAHKDLR
Ga0318517_105612341	3300031835	Soil	LNLIVDQPPNTSVDFTTANSMQDIGRKLLQSIAFASPDDASIQAAIEANDAFIDRLKAISEAAQGLMIDQGTD
Ga0318511_100331003	3300031845	Soil	NHIDFKSAQSMQDVGRKLLQSVGFKEPDDVSIQAAIEANDAFIDRLQAIRDRAQGLTID
Ga0306919_109301611	3300031879	Soil	GRKLLQTVGFREPDDASIAAAIEANDAFIDWLTAIRDKAQALTIDRDD
Ga0306925_112526071	3300031890	Soil	AKNMQDLGRKLLQTVGFREPDDASIAAAIEANDAFIDRLTAIRDKAQALTIDRDD
Ga0306923_107421433	3300031910	Soil	QIDFKLAKNMQDLGRKLLQTVGFREPDDASIAAAIEANDAFIDRLTAIRDKAQALTIDRD
Ga0306923_110432002	3300031910	Soil	RKLLQSVGFKEPGDVSIQAAIEANDALIARLKAIRDSAQRLTLE
Ga0306923_124105752	3300031910	Soil	AQSMQDIGKKLLQSIGFASPDDVSIQAAIEANDVFIDRLKAIREAAQGLTVDQDD
Ga0310916_113536302	3300031942	Soil	SMQEIGRKLLQSVGFKEPDDVSIQAAIEANDALIARLKAIRDSAQRLTLE
Ga0310913_108435181	3300031945	Soil	DDNDTNHIDFNSAQSMQDIGKKLLQSIGFASPDDVSIQAAIEANDAFIDQLKAISEAAQGLTLDQSE
Ga0310913_109052561	3300031945	Soil	IDFQTANSMTDVGRKLLQCVGFASPDDASIQAAIEANDAFIDRLKAISEAAQGLMIDQGT
Ga0310910_102883852	3300031946	Soil	NSAQSMRDIGKKLLQSIGFASPDDVSIQAAIEANDAFIDQLKAISEAAQGLTLDQSE
Ga0310910_104749942	3300031946	Soil	QARSMTDVGRKLLQSVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0310909_115753022	3300031947	Soil	DDTDTNHIDFNSAQSMQDLGKKLLQSIGFASPDDVSIQAAIEANDQFIRRLEAIRDAAQELTIEQD
Ga0306926_100713918	3300031954	Soil	CPNTQQIDFKQARSMTDVGRKLLQSVGFREPDDASINAAIKANDAFIDRLTAIRDKAQALTIDQG
Ga0306926_119713122	3300031954	Soil	HIDFNSAQSMQDIGKKLLQSIGFASPDDVSIQAAIEANDVFIDRLKAIREAAQGLTVDQD
Ga0306926_127551412	3300031954	Soil	RSMQDIGRKLLQSVGFKEPDDVSIQAAIEANDAFIDRLKAIRDSAQGLAIDQDD
Ga0318569_102468781	3300032010	Soil	RISDAPNASEIDFDAARSMTDIGRKLLQSVGFASPDDHSIQAAVEANDTFIDRLKAISEAAQGRTLDQDD
Ga0318558_103462221	3300032044	Soil	MRDIGKKLLQSIGFASPDDVSIQAAIEANDAFIDQLKAISEAAQGLTL
Ga0318506_103547762	3300032052	Soil	AVDFASANSMQDIGRKLLQSVGFREPDDVSIAAAIEANHAFIERLEAIRDEAGQTIDDDD
Ga0318575_104172531	3300032055	Soil	DDDKPAVDFASANSMQDIGRKLLQSVGFREPDDVSIAAAIEANDAFIERLEAIRDEAGQTIDDDD
Ga0318533_101246633	3300032059	Soil	TDIGRKLLQAVGFNEPDDVSIQAAIEANDAFVERLEAIRDNAHKDLR
Ga0318533_102576011	3300032059	Soil	HHIKDDNDTNHIDFNSAQSMRDIGKKLLQSIGFASPDDVSIQAAIEANDAFIDQLKAISEAAQGLTLDQSE
Ga0306920_1022812121	3300032261	Soil	VDCPNTQQIDFKQARSMTDVGRKLLESVGFREPDDASIKAAIEANDAFIDRLQQIRDSAQGLTLQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences