Metagenome / Metatranscriptome Family F047293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047293
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	61 residues
Representative Sequence	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP
Number of Associated Samples	118
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.67 %
% of genes near scaffold ends (potentially truncated)	37.33 %
% of genes from short scaffolds (< 2000 bps)	87.33 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.64% β-sheet: 23.73% Coil/Unstructured: 57.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF00881	Nitroreductase	24.67
PF07883	Cupin_2	8.67
PF01458	SUFBD	2.67
PF01925	TauE	2.00
PF01135	PCMT	1.33
PF13561	adh_short_C2	0.67
PF01035	DNA_binding_1	0.67
PF13565	HTH_32	0.67
PF01339	CheB_methylest	0.67
PF11149	DUF2924	0.67
PF02586	SRAP	0.67
PF13714	PEP_mutase	0.67
PF00589	Phage_integrase	0.67
PF01883	FeS_assembly_P	0.67
PF13416	SBP_bac_8	0.67
PF13535	ATP-grasp_4	0.67
PF04828	GFA	0.67
PF05559	DUF763	0.67
PF04679	DNA_ligase_A_C	0.67
PF04221	RelB	0.67
PF13649	Methyltransf_25	0.67
PF02617	ClpS	0.67
PF01812	5-FTHF_cyc-lig	0.67
PF13737	DDE_Tnp_1_5	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	2.67
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.00
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.33
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.33
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.33
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.33
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.33
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.67
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.67
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	0.67
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.67
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.67
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.67
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.67
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.33 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.00 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.33 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	5.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.67 %
Sneathiellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales	0.67 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.67 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.33 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	5.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.33 %
unclassified Sneathiellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales	0.67 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.67 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.67 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.33 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	5.33 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.67 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.67 %
Methylovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.33 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	5.33 %
Methylovulum psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	0.67 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.67 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.33 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	5.33 %
Methylovulum psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	0.67 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.67 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.67 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.67 %
Sneathiellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119746375	Not Available	764	Open in IMG/M
3300002568\|C688J35102_120680487	Not Available	1342	Open in IMG/M
3300002914\|JGI25617J43924_10107750	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300002914\|JGI25617J43924_10355512	Not Available	508	Open in IMG/M
3300003505\|JGIcombinedJ51221_10024675	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300003505\|JGIcombinedJ51221_10033297	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300003505\|JGIcombinedJ51221_10033667	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300004080\|Ga0062385_10048892	Not Available	1817	Open in IMG/M
3300004082\|Ga0062384_100861042	Not Available	638	Open in IMG/M
3300004092\|Ga0062389_103159653	Not Available	617	Open in IMG/M
3300004152\|Ga0062386_100958097	Not Available	708	Open in IMG/M
3300004635\|Ga0062388_100699704	Not Available	946	Open in IMG/M
3300005163\|Ga0066823_10136459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	533	Open in IMG/M
3300005167\|Ga0066672_10102092	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300005177\|Ga0066690_10320155	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005186\|Ga0066676_10526778	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005434\|Ga0070709_10868738	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005436\|Ga0070713_100040838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3775	Open in IMG/M
3300005437\|Ga0070710_10321551	Not Available	1016	Open in IMG/M
3300005454\|Ga0066687_10090642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1522	Open in IMG/M
3300005471\|Ga0070698_100686853	Not Available	965	Open in IMG/M
3300005574\|Ga0066694_10301278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300005602\|Ga0070762_11191572	Not Available	527	Open in IMG/M
3300005764\|Ga0066903_100441270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2169	Open in IMG/M
3300005921\|Ga0070766_10103096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1692	Open in IMG/M
3300006172\|Ga0075018_10196885	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006172\|Ga0075018_10203079	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300006173\|Ga0070716_100795287	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300006175\|Ga0070712_101253732	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006175\|Ga0070712_101824401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300006791\|Ga0066653_10048797	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300006800\|Ga0066660_10165743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1652	Open in IMG/M
3300006800\|Ga0066660_10204311	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300006954\|Ga0079219_11796228	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300007258\|Ga0099793_10051600	Not Available	1815	Open in IMG/M
3300007258\|Ga0099793_10324441	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300007788\|Ga0099795_10013563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2504	Open in IMG/M
3300007788\|Ga0099795_10036491	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300007788\|Ga0099795_10254298	Not Available	759	Open in IMG/M
3300009012\|Ga0066710_100738438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1504	Open in IMG/M
3300009012\|Ga0066710_102837078	Not Available	683	Open in IMG/M
3300009088\|Ga0099830_10969775	Not Available	704	Open in IMG/M
3300009137\|Ga0066709_101304548	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300009137\|Ga0066709_101642446	Not Available	916	Open in IMG/M
3300009143\|Ga0099792_10726570	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009143\|Ga0099792_10971781	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300009147\|Ga0114129_12180999	Not Available	667	Open in IMG/M
3300010048\|Ga0126373_13024746	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010154\|Ga0127503_10164503	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300010159\|Ga0099796_10048963	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300010325\|Ga0134064_10395894	Not Available	550	Open in IMG/M
3300011120\|Ga0150983_14029610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	722	Open in IMG/M
3300011270\|Ga0137391_10123595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2246	Open in IMG/M
3300012189\|Ga0137388_10308080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300012198\|Ga0137364_10303221	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300012203\|Ga0137399_11317932	Not Available	606	Open in IMG/M
3300012582\|Ga0137358_10026104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3800	Open in IMG/M
3300012582\|Ga0137358_10817877	Not Available	617	Open in IMG/M
3300012683\|Ga0137398_10582668	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012917\|Ga0137395_10037155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2985	Open in IMG/M
3300012917\|Ga0137395_11230705	Not Available	522	Open in IMG/M
3300012923\|Ga0137359_11051202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	698	Open in IMG/M
3300012924\|Ga0137413_10545344	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300012961\|Ga0164302_10971753	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300016270\|Ga0182036_10133515	Not Available	1743	Open in IMG/M
3300016294\|Ga0182041_10425482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300018431\|Ga0066655_10287636	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300018431\|Ga0066655_10493347	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300018468\|Ga0066662_11619001	Not Available	676	Open in IMG/M
3300020140\|Ga0179590_1198532	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300020199\|Ga0179592_10210353	Not Available	880	Open in IMG/M
3300020579\|Ga0210407_10016044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5562	Open in IMG/M
3300020579\|Ga0210407_10047115	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300020580\|Ga0210403_10129612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2056	Open in IMG/M
3300020580\|Ga0210403_10236695	Not Available	1498	Open in IMG/M
3300020580\|Ga0210403_10333657	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300020581\|Ga0210399_10009004	All Organisms → cellular organisms → Bacteria → Proteobacteria	7799	Open in IMG/M
3300020581\|Ga0210399_10493009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1019	Open in IMG/M
3300020581\|Ga0210399_10508178	Not Available	1001	Open in IMG/M
3300020581\|Ga0210399_10702683	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300020583\|Ga0210401_10674463	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300020583\|Ga0210401_10707275	Not Available	868	Open in IMG/M
3300021168\|Ga0210406_10304320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1295	Open in IMG/M
3300021170\|Ga0210400_10924555	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300021171\|Ga0210405_11072782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	603	Open in IMG/M
3300021171\|Ga0210405_11299182	Not Available	534	Open in IMG/M
3300021178\|Ga0210408_10148654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1855	Open in IMG/M
3300021178\|Ga0210408_10681570	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021178\|Ga0210408_10856101	Not Available	709	Open in IMG/M
3300021178\|Ga0210408_11421586	Not Available	522	Open in IMG/M
3300021180\|Ga0210396_11658946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	520	Open in IMG/M
3300021403\|Ga0210397_10635846	Not Available	817	Open in IMG/M
3300021404\|Ga0210389_10165750	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300021405\|Ga0210387_10269020	Not Available	1494	Open in IMG/M
3300021406\|Ga0210386_10381815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylovulum → Methylovulum psychrotolerans	1213	Open in IMG/M
3300021407\|Ga0210383_10821015	Not Available	795	Open in IMG/M
3300021474\|Ga0210390_10161223	Not Available	1891	Open in IMG/M
3300021474\|Ga0210390_11228478	Not Available	604	Open in IMG/M
3300021478\|Ga0210402_10894079	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300022528\|Ga0242669_1012825	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300022529\|Ga0242668_1014499	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300022557\|Ga0212123_10587860	Not Available	705	Open in IMG/M
3300022708\|Ga0242670_1048363	Not Available	599	Open in IMG/M
3300024347\|Ga0179591_1146549	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300025915\|Ga0207693_10032354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4128	Open in IMG/M
3300025916\|Ga0207663_10614519	Not Available	855	Open in IMG/M
3300025928\|Ga0207700_10461339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1121	Open in IMG/M
3300026322\|Ga0209687_1004620	All Organisms → cellular organisms → Bacteria → Proteobacteria	4635	Open in IMG/M
3300026376\|Ga0257167_1035445	Not Available	750	Open in IMG/M
3300026481\|Ga0257155_1026444	Not Available	852	Open in IMG/M
3300026496\|Ga0257157_1062872	Not Available	632	Open in IMG/M
3300026552\|Ga0209577_10029419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4785	Open in IMG/M
3300026557\|Ga0179587_10630639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	706	Open in IMG/M
3300027070\|Ga0208365_1002764	Not Available	2013	Open in IMG/M
3300027074\|Ga0208092_101973	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300027076\|Ga0208860_1004080	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300027537\|Ga0209419_1085829	Not Available	624	Open in IMG/M
3300027698\|Ga0209446_1004580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3403	Open in IMG/M
3300027737\|Ga0209038_10086611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	942	Open in IMG/M
3300027783\|Ga0209448_10057664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300027812\|Ga0209656_10443286	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300027824\|Ga0209040_10040124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2892	Open in IMG/M
3300027824\|Ga0209040_10328440	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300027855\|Ga0209693_10473903	Not Available	601	Open in IMG/M
3300027884\|Ga0209275_10529286	Not Available	673	Open in IMG/M
3300027889\|Ga0209380_10036426	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300027889\|Ga0209380_10045168	All Organisms → cellular organisms → Bacteria → Proteobacteria	2497	Open in IMG/M
3300027903\|Ga0209488_10178204	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300028906\|Ga0308309_11444257	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300030916\|Ga0075386_12045166	Not Available	567	Open in IMG/M
3300031047\|Ga0073995_10021840	Not Available	1323	Open in IMG/M
3300031057\|Ga0170834_112836480	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300031128\|Ga0170823_14436460	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300031231\|Ga0170824_126851186	Not Available	700	Open in IMG/M
3300031446\|Ga0170820_17210477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300031469\|Ga0170819_14905658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300031474\|Ga0170818_101000849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1292	Open in IMG/M
3300031543\|Ga0318516_10269999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300031715\|Ga0307476_10603977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → unclassified Sneathiellales → Sneathiellales bacterium	814	Open in IMG/M
3300031754\|Ga0307475_11094162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300031820\|Ga0307473_10096083	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300031845\|Ga0318511_10306003	Not Available	719	Open in IMG/M
3300031890\|Ga0306925_10982418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031896\|Ga0318551_10331073	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300031897\|Ga0318520_10354033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300032001\|Ga0306922_11709385	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032180\|Ga0307471_101002777	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300032180\|Ga0307471_101009941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300032180\|Ga0307471_102182051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	697	Open in IMG/M
3300032205\|Ga0307472_102289651	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.33%
Host-Associated	Host-Associated	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.33%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.33%
Freshwater	Environmental → Aquatic → Freshwater	8.00%
Sediment	Environmental → Aquatic → Sediment	1.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.67%
Loam	Environmental → Terrestrial → Soil → Loam	18.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.33%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.67%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.33%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.67%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1197463752	3300002568	Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
C688J35102_1206804873	3300002568	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGQKKDALPFPTEADAARTIAQLRAPGPVSIEPIP*
JGI25617J43924_101077502	3300002914	Grasslands Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAAEIARSA*
JGI25617J43924_103555121	3300002914	Grasslands Soil	MFVIRVTYPGGHSVWLTRRFPSAAWGPQKDALSFPTETDAARTAARLRPSGPVTIEPLSNRQPE
JGIcombinedJ51221_100246751	3300003505	Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALLFPTEADAARVTARLRPSGPVTIEPSH*
JGIcombinedJ51221_100332973	3300003505	Forest Soil	MFVIRVAYPGGHSVWLTRRFPTAKWGAEKDALPFPTEADAARVTARLRPSGPVTIEPIP*
JGIcombinedJ51221_100336673	3300003505	Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0062385_100488921	3300004080	Bog Forest Soil	VFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPAGPVSIEPIP*
Ga0062384_1008610421	3300004082	Bog Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEAIP*
Ga0062389_1031596532	3300004092	Bog Forest Soil	MSPALCGIGPYAGRLAMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGAVSIEPIP*
Ga0062386_1009580971	3300004152	Bog Forest Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIPIDAPEIARTA*
Ga0062388_1006997044	3300004635	Bog Forest Soil	MFVIRVTYPGGHSVWLTRRFPSAAWGLEKDALSFPTETDAARTAERLRPSGPLSIEPVR*
Ga0066823_101364591	3300005163	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIESIAPEIARSA*
Ga0066672_101020922	3300005167	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0066690_103201552	3300005177	Soil	MFVIRVAYPGGHSVWLTRRFPSAGWGPERDALSFPTEQDAARTAARLRPSGPVSIEPLSDKQP
Ga0066676_105267781	3300005186	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTETDAARTIARLRPSGPVSIEPIP*
Ga0070709_108687382	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA*
Ga0070713_1000408382	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVAARLRPSGPVTIEPIP*
Ga0070710_103215513	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVATRLRPSGPVTIEPIP*
Ga0066687_100906422	3300005454	Soil	MTYAGRLAMFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0070698_1006868532	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VFVIRVTYPAGHSVWLTRRFPSVAWGPEKDALSFPTETDAARTAARLRPSGPITIEPIR*
Ga0066694_103012781	3300005574	Soil	MFVIRVAYPGGHSVWLTRRFPTVTWGLKNDALPFPTEEDAARTIARLRAPGPVSIEPIG*
Ga0070762_111915722	3300005602	Soil	MFVIRVSYPGGHSVWLTRRFPIAAWGLKKDALPFPTEADAARTIARLRPPGPVSIEPIP*
Ga0066903_1004412704	3300005764	Tropical Forest Soil	MFVIRVAYPAGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVTIEPIP*
Ga0070766_101030962	3300005921	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA*
Ga0075018_101968851	3300006172	Watersheds	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALLFPTEADAARVTARLRPSGPVTIEPIP*
Ga0075018_102030791	3300006172	Watersheds	YPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA*
Ga0070716_1007952871	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEFAKPA*
Ga0070712_1012537321	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGRLAMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA*
Ga0070712_1018244012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YAGRLAMFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0066653_100487973	3300006791	Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEER
Ga0066660_101657432	3300006800	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPG*
Ga0066660_102043112	3300006800	Soil	MFVIRVAYPGGHSVWLTRRFPSAGWGPERDALSFPTEQDAARTAARLRPSGPVSIEPLSDKQPKIG*
Ga0079219_117962281	3300006954	Agricultural Soil	RLAMFVIRVLYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
Ga0099793_100516002	3300007258	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPVP*
Ga0099793_103244412	3300007258	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
Ga0099795_100135635	3300007788	Vadose Zone Soil	MFVIRVLYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
Ga0099795_100364913	3300007788	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIQPIAPEIARSA*
Ga0099795_102542983	3300007788	Vadose Zone Soil	RGGLAMFVIRVAYPGGHSVWLTRRFPTATWGPEKDALLFPTEADAARVTARLRPSGPVTIEPSH*
Ga0066710_1007384382	3300009012	Grasslands Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPERSA
Ga0066710_1028370782	3300009012	Grasslands Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTTRLRPSGPVTIEPIP
Ga0099830_109697753	3300009088	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPSAAWGPEKDALSFPTQADAARTAARLRPSGPVT
Ga0066709_1013045481	3300009137	Grasslands Soil	YPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0066709_1016424461	3300009137	Grasslands Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIVKPG*
Ga0099792_107265701	3300009143	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRP
Ga0099792_109717812	3300009143	Vadose Zone Soil	GGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKRG*
Ga0114129_121809991	3300009147	Populus Rhizosphere	MFEIRVAYPGGHSVWLTRRFPSAAWGLEKDALSFPTEADAARTVARLRPAGPVTIEPVR*
Ga0126373_130247462	3300010048	Tropical Forest Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGPEEDALSFPTETDTARTAARLRPSGPVTIEPAQ
Ga0127503_101645031	3300010154	Soil	MFVIRVAYPGGHSVWLTRRFPTAKWGAEKDALPFPTEADAARVTARLRPSGPV
Ga0099796_100489631	3300010159	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPASIEPIP*
Ga0134064_103958942	3300010325	Grasslands Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
Ga0150983_140296102	3300011120	Forest Soil	GRLAMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA*
Ga0137391_101235952	3300011270	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPSAAWGPEKDALSFPTQADAARTAARLRPSGPVTIEPLR*
Ga0137388_103080802	3300012189	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPIP*
Ga0137364_103032212	3300012198	Vadose Zone Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALLFPTEADASRTIARLRPSGPVSIEPIAPEIAKPA*
Ga0137399_113179322	3300012203	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIQPIAP
Ga0137358_100261045	3300012582	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPG*
Ga0137358_108178771	3300012582	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARPPASGPVTIEPIP*
Ga0137398_105826682	3300012683	Vadose Zone Soil	MFVIRVLYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP*
Ga0137395_100371553	3300012917	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPKIARSA*
Ga0137395_112307051	3300012917	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGPEKDALSFPTETDAARTAARLRPSGPVTIEPIR*
Ga0137359_110512022	3300012923	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIQPIAPEIARSA*
Ga0137413_105453441	3300012924	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0164302_109717532	3300012961	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA*
Ga0182036_101335153	3300016270	Soil	MFVIRVAYPGGHSVWPTRGFPTVVWAEERRAAVSTEADAARTIARLRPSGPVTIEPIP
Ga0182041_104254823	3300016294	Soil	MFVIRVAYPGGHLVWPTRRFPTAAWGPEEDALSSPTETDAARRASRLRPSGPLTIEPVQP
Ga0066655_102876362	3300018431	Grasslands Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA
Ga0066655_104933472	3300018431	Grasslands Soil	MFVIRVSYPGGHSVWLTRRFLTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP
Ga0066662_116190011	3300018468	Grasslands Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP
Ga0179590_11985321	3300020140	Vadose Zone Soil	IRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIP
Ga0179592_102103531	3300020199	Vadose Zone Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPVP
Ga0210407_1001604410	3300020579	Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVAARLRPSGPVTIEPIP
Ga0210407_100471154	3300020579	Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALLFPTEADAARVTARLRPSGPVTIEPSH
Ga0210403_101296123	3300020580	Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGPKKDALPFPTEADAARVTARLRPSGPVTIEPIA
Ga0210403_102366952	3300020580	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA
Ga0210403_103336572	3300020580	Soil	MFVIRVAYPAGHSIWLTRRFPTTTWGPKKDALRFPTKPDAARVTARLRPSGSMTIEPIA
Ga0210399_1000900410	3300020581	Soil	MFVIRVAYPGGHSVWLTRRFPTAKWGAEKDALPFPTEADAARVTARLRPSGPVTIEPIP
Ga0210399_104930092	3300020581	Soil	MFVIRVAYPGGHSVWLTRRFPTTTWGPKKDALPFPTEADAARMTARLRPSGPVTIEPIARHAKGCTRA
Ga0210399_105081782	3300020581	Soil	MVGPGVPLGDLAMFVIRVAYPGGHSVWLTRRFPTATWGPEKDALAFPTEADAARVTARLRPSGPVTIESIP
Ga0210399_107026832	3300020581	Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGPEKDALSFPTQTDAARTAARLRPSGPVTIEPVQP
Ga0210401_106744631	3300020583	Soil	MFAIRVSYPGGHSVWLRRRFPPVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA
Ga0210401_107072751	3300020583	Soil	MFVIRVEYPGGHSVWLTRRFPTATWGPKKDALPFPTEPDAARVTARLRPSGPVTIEPIA
Ga0210406_103043201	3300021168	Soil	AMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0210400_109245552	3300021170	Soil	SYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLHPSGPVSIEPIAPEIARSA
Ga0210405_110727821	3300021171	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIAGSA
Ga0210405_112991822	3300021171	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPS
Ga0210408_101486541	3300021178	Soil	LGHRGDLAMFVIRVAYPGGHSVWLTRRFPTATWGPKKDALPFPTEADAARVTARLRPSGPVTIEPIP
Ga0210408_106815701	3300021178	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALLFPTEADAARTIARLRPSGPVSIE
Ga0210408_108561011	3300021178	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKRG
Ga0210408_114215862	3300021178	Soil	QRGDLVMFVIRVEYPGGHSVWLTRRFPTATWGPKKDALPFPTEPDAARATARLRASGPVTIEPIV
Ga0210396_116589461	3300021180	Soil	GRLAMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0210397_106358461	3300021403	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGP
Ga0210389_101657502	3300021404	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLHPSGPVSIEPIAPEIARSA
Ga0210387_102690202	3300021405	Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIESIP
Ga0210386_103818152	3300021406	Soil	MFVIRVAYPGSHSVWLTRRFPSAAWGLEKDALSFPTEADAARTVARLRPSGPVIIEPLR
Ga0210383_108210152	3300021407	Soil	MFAIRVSYPGGHSVWLRRRFPPVAWGLKKDALPFPTEADAARTIARLRP
Ga0210390_101612233	3300021474	Soil	MFVIRVAYPGGHSVWLTNRFPLAASGPEKDALSFPTEADAAPTVARLRPAGPVVIEPLR
Ga0210390_112284781	3300021474	Soil	GQRGGLVMFVIRVEYPGGHSVWLTRRFPTATWGPKKDALPFPTEPDAARVTARLRPSGPVTIEPIA
Ga0210402_108940791	3300021478	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPWSI
Ga0242669_10128251	3300022528	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGSVSIEPIAPEIARSA
Ga0242668_10144992	3300022529	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPA
Ga0212123_105878602	3300022557	Iron-Sulfur Acid Spring	VFEMTYAGRLAMFAIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0242670_10483631	3300022708	Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAP
Ga0179591_11465492	3300024347	Vadose Zone Soil	MFAIRVSYPGGHSVWLTRRFPIVAWGLKKDALPFPTEADAARTIARLRPSAPVSIEPIALEIAKPA
Ga0207693_100323548	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEFAKPA
Ga0207663_106145191	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSRPVSIEPIP
Ga0207700_104613392	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALSFPTEADAARTIARLRPSGPVSIEPIAPEFAKPA
Ga0209687_10046206	3300026322	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGREH
Ga0257167_10354451	3300026376	Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPS
Ga0257155_10264441	3300026481	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSG
Ga0257157_10628722	3300026496	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAP
Ga0209577_100294195	3300026552	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARAIARLRPSGPVSIEPIAPEIAKPA
Ga0179587_106306391	3300026557	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIAKPG
Ga0208365_10027642	3300027070	Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPIP
Ga0208092_1019731	3300027074	Forest Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIAPLRPSGPVSIEPIAPEIARSA
Ga0208860_10040802	3300027076	Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKTDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0209419_10858292	3300027537	Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVSFPTEADAARTIARLRPSGPVSIEPIAPEIARS
Ga0209446_10045803	3300027698	Bog Forest Soil	VFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPAGPVSIEPIP
Ga0209038_100866112	3300027737	Bog Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEAIP
Ga0209448_100576643	3300027783	Bog Forest Soil	SSAAYAGRLAVFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPAGPVSIEPIP
Ga0209656_104432861	3300027812	Bog Forest Soil	MFVIRVAYPGGHSVWLTRRFPSAAWGPEKDALSFPTQTDAARTAARLRPSGPLTIEPVQ
Ga0209040_100401241	3300027824	Bog Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPAKDALPFPTEADAARVAARLRPSGPVTIEPIP
Ga0209040_103284402	3300027824	Bog Forest Soil	MFVIRVAYPGGHSVWLTRRFPSAAWGPEKDALSFPTETDAARTAARLRPSGPLTIEPVQ
Ga0209693_104739031	3300027855	Soil	MFVIRVSYPGGHSVWLTRRFPTAAWGLKKDALPFPTEADAARTIARLRPSGPVS
Ga0209275_105292861	3300027884	Soil	MFVIRVSYPGGHSVWLTRRFPIAAWGLKKDALPLPTEADAARTIARLRPPGPVSIEPIP
Ga0209380_100364264	3300027889	Soil	MFAIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEIVKPA
Ga0209380_100451681	3300027889	Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSG
Ga0209488_101782043	3300027903	Vadose Zone Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIQPIAPEIARSA
Ga0308309_114442572	3300028906	Soil	MFVIRVAYPGGHSVWLTRRFPTAKWGAEKDALPFPTEADAARVTARLRP
Ga0075386_120451661	3300030916	Soil	MVGPGVPLGHRGDLAMFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPIA
Ga0073995_100218402	3300031047	Soil	NRVPLGHRGDLAMFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEPVP
Ga0170834_1128364801	3300031057	Forest Soil	KAVFEMTYAGRLAMFVIRVSYPGGHSVWLTRRFPTVAWGLKKDALPFPTEADAARTIARLRPSGPVSIEPIAPEITRSA
Ga0170823_144364602	3300031128	Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEITRSA
Ga0170824_1268511861	3300031231	Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPEKDALPFSTEADAARVTARLRPSGPVTIE
Ga0170820_172104772	3300031446	Forest Soil	GDLAMFVIRVAYPAGHSIWLTRRFPTTTWGPKKDALRFPTEPDAARVTARLRPSGSMTIEPIA
Ga0170819_149056582	3300031469	Forest Soil	MFVIRVAYPAGHSIWLTRRFPTTTWGPKKDALRFPTEPDAARVTARLRPSGLVTIEPIA
Ga0170818_1010008492	3300031474	Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPPGPVSIEPIAPEIARSA
Ga0318516_102699991	3300031543	Soil	MFVIRVAYPGGHSVWLTRGFPTVVWAEERRAAVSTEADAARTIARLRPSGPVTIEPIP
Ga0307476_106039772	3300031715	Hardwood Forest Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGPEKDALSFPTETDAARTASRLRPSGPLTV
Ga0307475_110941621	3300031754	Hardwood Forest Soil	YPGGHSVWLTRRFPTATWGPEKDALPFPTEADAARVTARLRPSGPVTIEAIP
Ga0307473_100960832	3300031820	Hardwood Forest Soil	MFVIRVSYLGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0318511_103060031	3300031845	Soil	MFVIRVAYPGGHSVWLTRGFPTVVWAEERRAAVSTEADAARTIARLRPSG
Ga0306925_109824181	3300031890	Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGLEKDALSFPTQTDAARTAARLRPSGPVTIEPVQPRPAGDLG
Ga0318551_103310731	3300031896	Soil	MFVIRVAYPGGHLVWPTRRFPTAAWGPEEDALSFPTETDAARRASRLRPSGPLTIEPVQPRP
Ga0318520_103540333	3300031897	Soil	FVIRVAYPGGHSVWLTRGFPTVVWAEERRAAVSTEADAARTIARLRPSGPVTIEPIP
Ga0306922_117093851	3300032001	Soil	MFVIRVAYPGGHSVWLTRRFPTAAWGLEKDALSFPTQTDAARTAARLRPSGP
Ga0307471_1010027771	3300032180	Hardwood Forest Soil	SYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSIEPIAPEIARSA
Ga0307471_1010099412	3300032180	Hardwood Forest Soil	MFVIRVAYPGGHSVWLTRRFPTATWGPKKDALPFPTEPDAARATARLRASGPVTIEPIV
Ga0307471_1021820511	3300032180	Hardwood Forest Soil	MFVIRVSYPGGHSVWLTRRFPTVAWGLKKDAVPFPTEADAARTIARLRPSGPVSI
Ga0307472_1022896512	3300032205	Hardwood Forest Soil	MFVIRVTYPGGHSVWLTRRFPSAAWGPEKDALSFPTETDAARTAAGLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047293

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences