Metagenome / Metatranscriptome Family F047322

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047322
Family Type	Metagenome / Metatranscriptome
Number of Sequences	150
Average Sequence Length	61 residues
Representative Sequence	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Number of Associated Samples	129
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	43.33 %
% of genes from short scaffolds (< 2000 bps)	87.33 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (34.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.30% β-sheet: 0.00% Coil/Unstructured: 37.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF13581	HATPase_c_2	12.00
PF07750	GcrA	8.67
PF02518	HATPase_c	6.00
PF00497	SBP_bac_3	1.33
PF08028	Acyl-CoA_dh_2	1.33
PF03401	TctC	0.67
PF07568	HisKA_2	0.67
PF12071	DUF3551	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG5352	Uncharacterized conserved protein	Function unknown [S]	8.67
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.33
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.67
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	85.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.33 %
Unclassified	root	N/A	12.67 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	22.67 %
Unclassified	root	N/A	12.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_236390_length_1793_cov_8.517569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1825	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0660882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1083	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10791353	Not Available	590	Open in IMG/M
3300001164\|JGI11823J13286_1016662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300001661\|JGI12053J15887_10000750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13932	Open in IMG/M
3300001661\|JGI12053J15887_10482749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	592	Open in IMG/M
3300004463\|Ga0063356_102595187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300004479\|Ga0062595_102221832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	538	Open in IMG/M
3300004480\|Ga0062592_101543752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	639	Open in IMG/M
3300004643\|Ga0062591_101667261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	645	Open in IMG/M
3300005146\|Ga0066817_1002461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1142	Open in IMG/M
3300005161\|Ga0066807_1029071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300005165\|Ga0066869_10001035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2986	Open in IMG/M
3300005173\|Ga0066822_1002166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300005331\|Ga0070670_100005812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10430	Open in IMG/M
3300005331\|Ga0070670_100053170	All Organisms → cellular organisms → Bacteria → Proteobacteria	3478	Open in IMG/M
3300005343\|Ga0070687_100037815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2415	Open in IMG/M
3300005356\|Ga0070674_100782104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300005366\|Ga0070659_100574483	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300005435\|Ga0070714_101640074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300005457\|Ga0070662_100009955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6226	Open in IMG/M
3300005457\|Ga0070662_101709765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300005459\|Ga0068867_102238176	Not Available	519	Open in IMG/M
3300005549\|Ga0070704_101965275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300005718\|Ga0068866_10785533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	661	Open in IMG/M
3300005719\|Ga0068861_102158413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005841\|Ga0068863_101880957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	608	Open in IMG/M
3300006028\|Ga0070717_10736977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300006038\|Ga0075365_10007989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5969	Open in IMG/M
3300006038\|Ga0075365_10057080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2597	Open in IMG/M
3300006042\|Ga0075368_10171928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300006042\|Ga0075368_10586064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	504	Open in IMG/M
3300006048\|Ga0075363_100313559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300006048\|Ga0075363_100419662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300006058\|Ga0075432_10421081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	580	Open in IMG/M
3300006163\|Ga0070715_10874008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300006177\|Ga0075362_10167008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1062	Open in IMG/M
3300006178\|Ga0075367_10176275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1332	Open in IMG/M
3300006178\|Ga0075367_10224279	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300006178\|Ga0075367_10240513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300006572\|Ga0074051_11791487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300006578\|Ga0074059_10027968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1152	Open in IMG/M
3300006580\|Ga0074049_10091496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300007076\|Ga0075435_100318073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1332	Open in IMG/M
3300009098\|Ga0105245_10045452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3922	Open in IMG/M
3300009162\|Ga0075423_11465888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300009174\|Ga0105241_10283357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300009177\|Ga0105248_11179550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	866	Open in IMG/M
3300009840\|Ga0126313_10435378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300010045\|Ga0126311_11684881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300010147\|Ga0126319_1123849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1587	Open in IMG/M
3300010373\|Ga0134128_10251021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1985	Open in IMG/M
3300010375\|Ga0105239_11399949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300010396\|Ga0134126_13054518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	505	Open in IMG/M
3300010396\|Ga0134126_13082530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	502	Open in IMG/M
3300011000\|Ga0138513_100040253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300011106\|Ga0151489_1152848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2927	Open in IMG/M
3300011119\|Ga0105246_10446361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300012212\|Ga0150985_101827436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300012212\|Ga0150985_107926768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300012469\|Ga0150984_100542447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	553	Open in IMG/M
3300012469\|Ga0150984_111667248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300012909\|Ga0157290_10273596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300012910\|Ga0157308_10367270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	549	Open in IMG/M
3300012914\|Ga0157297_10515610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	506	Open in IMG/M
3300012916\|Ga0157310_10431578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300012922\|Ga0137394_11558250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	518	Open in IMG/M
3300012924\|Ga0137413_10252434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1211	Open in IMG/M
3300012924\|Ga0137413_10518606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	879	Open in IMG/M
3300012924\|Ga0137413_10896463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300012944\|Ga0137410_10614094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300012951\|Ga0164300_10062911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1513	Open in IMG/M
3300012958\|Ga0164299_10583524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	761	Open in IMG/M
3300012961\|Ga0164302_11291321	Not Available	589	Open in IMG/M
3300012989\|Ga0164305_10004256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6322	Open in IMG/M
3300013297\|Ga0157378_12244765	Not Available	597	Open in IMG/M
3300013308\|Ga0157375_12024584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300014325\|Ga0163163_10894769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300014326\|Ga0157380_10184646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1835	Open in IMG/M
3300014968\|Ga0157379_11239331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300015077\|Ga0173483_10129149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1090	Open in IMG/M
3300015077\|Ga0173483_10163795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300015371\|Ga0132258_11294032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1843	Open in IMG/M
3300015373\|Ga0132257_100761935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300017965\|Ga0190266_10905411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	579	Open in IMG/M
3300017997\|Ga0184610_1117612	Not Available	854	Open in IMG/M
3300018031\|Ga0184634_10103933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1243	Open in IMG/M
3300018051\|Ga0184620_10118056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	834	Open in IMG/M
3300018054\|Ga0184621_10297635	Not Available	569	Open in IMG/M
3300018055\|Ga0184616_10043885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1474	Open in IMG/M
3300018076\|Ga0184609_10480251	Not Available	568	Open in IMG/M
3300018465\|Ga0190269_10469597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300018469\|Ga0190270_12481244	Not Available	580	Open in IMG/M
3300018469\|Ga0190270_12596780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300018476\|Ga0190274_12318173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300018481\|Ga0190271_10154511	Not Available	2221	Open in IMG/M
3300019356\|Ga0173481_10303538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300019356\|Ga0173481_10432658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	652	Open in IMG/M
3300019361\|Ga0173482_10116703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	993	Open in IMG/M
3300019361\|Ga0173482_10167758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300019867\|Ga0193704_1063432	Not Available	705	Open in IMG/M
3300019873\|Ga0193700_1015962	Not Available	1233	Open in IMG/M
3300021078\|Ga0210381_10234657	Not Available	648	Open in IMG/M
3300025735\|Ga0207713_1223172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	567	Open in IMG/M
3300025903\|Ga0207680_11102285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	567	Open in IMG/M
3300025904\|Ga0207647_10252179	Not Available	1012	Open in IMG/M
3300025907\|Ga0207645_10108295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1798	Open in IMG/M
3300025914\|Ga0207671_10278059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1320	Open in IMG/M
3300025918\|Ga0207662_10000800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14489	Open in IMG/M
3300025942\|Ga0207689_10014733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6639	Open in IMG/M
3300025949\|Ga0207667_11098593	Not Available	779	Open in IMG/M
3300025961\|Ga0207712_12012843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	517	Open in IMG/M
3300025972\|Ga0207668_10004338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8326	Open in IMG/M
3300025972\|Ga0207668_11236702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	671	Open in IMG/M
3300026035\|Ga0207703_12289942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300026359\|Ga0257163_1018325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1080	Open in IMG/M
3300027181\|Ga0208997_1019198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300027866\|Ga0209813_10076846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300028592\|Ga0247822_10638265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300028708\|Ga0307295_10007548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2535	Open in IMG/M
3300028713\|Ga0307303_10007306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1883	Open in IMG/M
3300028714\|Ga0307309_10179667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	549	Open in IMG/M
3300028719\|Ga0307301_10022067	Not Available	1867	Open in IMG/M
3300028744\|Ga0307318_10047834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1414	Open in IMG/M
3300028755\|Ga0307316_10053966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1353	Open in IMG/M
3300028755\|Ga0307316_10200672	Not Available	718	Open in IMG/M
3300028778\|Ga0307288_10273952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	666	Open in IMG/M
3300028782\|Ga0307306_10125327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	700	Open in IMG/M
3300028784\|Ga0307282_10079651	Not Available	1498	Open in IMG/M
3300028793\|Ga0307299_10019074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2455	Open in IMG/M
3300028803\|Ga0307281_10043024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1398	Open in IMG/M
3300028807\|Ga0307305_10019354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3055	Open in IMG/M
3300028807\|Ga0307305_10436028	Not Available	590	Open in IMG/M
3300028810\|Ga0307294_10042382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1296	Open in IMG/M
3300028814\|Ga0307302_10231892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300028828\|Ga0307312_10780963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300028872\|Ga0307314_10255039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	546	Open in IMG/M
3300028884\|Ga0307308_10337622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	721	Open in IMG/M
3300031098\|Ga0308191_1036704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	537	Open in IMG/M
3300031170\|Ga0307498_10279739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300031198\|Ga0307500_10314063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300031226\|Ga0307497_10011277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2549	Open in IMG/M
3300031231\|Ga0170824_117753291	Not Available	661	Open in IMG/M
3300031231\|Ga0170824_126822066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1174	Open in IMG/M
3300031469\|Ga0170819_10466753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300031740\|Ga0307468_100731177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031858\|Ga0310892_10194036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300032013\|Ga0310906_10967679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300033550\|Ga0247829_10681112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300034690\|Ga0364923_0051657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.33%
Host-Associated	Host-Associated	34.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	34.67%
Aquatic	Environmental → Aquatic	5.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.67%
Roots	Host-Associated → Plants → Roots	8.00%
Sediment	Environmental → Aquatic → Sediment	4.00%
Freshwater	Environmental → Aquatic → Freshwater	1.33%
Floodplain	Environmental → Terrestrial → Floodplain	0.67%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.00%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	7.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.00%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	7.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.00%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	7.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.33%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.67%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02297030	2140918013	Soil	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
ICChiseqgaiiDRAFT_06608822	3300000033	Soil	SNAMDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
ICChiseqgaiiFebDRAFT_107913532	3300000363	Soil	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS*
JGI11823J13286_10166622	3300001164	Forest Soil	LKDSQRETPSRTPRLLNAAAWLETLTALEEEFKSILAEKTASTRQAADKRRDS*
JGI12053J15887_1000075012	3300001661	Forest Soil	MDGKTSALLKDSQRETPSRTPRLLNAAAWLETLTALEEEFKSILAEKTASTRQAADKRRDS*
JGI12053J15887_104827491	3300001661	Forest Soil	RLEGSIAMDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0063356_1025951872	3300004463	Arabidopsis Thaliana Rhizosphere	MDGKSSAVLKDPQDEATSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDP*
Ga0062595_1022218321	3300004479	Soil	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRRAADKRRDS*
Ga0062592_1015437521	3300004480	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQVTDKRRGS*
Ga0062591_1016672611	3300004643	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0066817_10024612	3300005146	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0066807_10290711	3300005161	Soil	AMDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0066869_100010356	3300005165	Soil	ALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0066822_10021661	3300005173	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0070670_10000581213	3300005331	Switchgrass Rhizosphere	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
Ga0070670_1000531705	3300005331	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRGS*
Ga0070687_1000378155	3300005343	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTAANRQADDKRRGS*
Ga0070674_1007821041	3300005356	Miscanthus Rhizosphere	MDGKNSALLKDPQPETPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRGS*
Ga0070659_1005744831	3300005366	Corn Rhizosphere	GKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKAAANRQSDDKPRGS*
Ga0070714_1016400742	3300005435	Agricultural Soil	DPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRGS*
Ga0070662_1000099552	3300005457	Corn Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0070662_1017097651	3300005457	Corn Rhizosphere	AVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
Ga0068867_1022381761	3300005459	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0070704_1019652751	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0068866_107855332	3300005718	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAANRQADDKRRGS*
Ga0068861_1021584131	3300005719	Switchgrass Rhizosphere	RPKWSSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0068863_1018809572	3300005841	Switchgrass Rhizosphere	KDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
Ga0070717_107369771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQGADKRGGS*
Ga0075365_100079893	3300006038	Populus Endosphere	MDGKNSALLKAPQPETPNRTGTPRLLNAAAWLETLAALEEEFKSILAEKTAATRQAADKRRGS*
Ga0075365_100570802	3300006038	Populus Endosphere	MDGKNSALLKDPQSQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAASRQAADKRRGS*
Ga0075368_101719282	3300006042	Populus Endosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKTAANRQADDKRRGS*
Ga0075368_105860641	3300006042	Populus Endosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRGS*
Ga0075363_1003135591	3300006048	Populus Endosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAANKRSGS*
Ga0075363_1004196622	3300006048	Populus Endosphere	QPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTAASRQAADKRRGS*
Ga0075432_104210812	3300006058	Populus Rhizosphere	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDP*
Ga0070715_108740081	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILDEKASSNRQTADRRRDR*
Ga0075362_101670082	3300006177	Populus Endosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAASRQAADKRRGS*
Ga0075367_101762753	3300006178	Populus Endosphere	MVDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAANR
Ga0075367_102242793	3300006178	Populus Endosphere	LLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKAAANRQSDDKPRGS*
Ga0075367_102405132	3300006178	Populus Endosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQVTDKRRGS*
Ga0074051_117914871	3300006572	Soil	KNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0074059_100279681	3300006578	Soil	RPKWSSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0074049_100914961	3300006580	Soil	LKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0075435_1003180731	3300007076	Populus Rhizosphere	LEMRLEWSNAMDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
Ga0105245_100454521	3300009098	Miscanthus Rhizosphere	KWSSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0075423_114658882	3300009162	Populus Rhizosphere	DGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS
Ga0105241_102833571	3300009174	Corn Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKAAANRQSDDKPRGS*
Ga0105248_111795501	3300009177	Switchgrass Rhizosphere	MDGKNSALLNDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRGS*
Ga0126313_104353782	3300009840	Serpentine Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0126311_116848812	3300010045	Serpentine Soil	DGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0126319_11238492	3300010147	Soil	MDGKTSALLKESQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0134128_102510213	3300010373	Terrestrial Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRRAADKRRGS*
Ga0105239_113999491	3300010375	Corn Rhizosphere	KDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0134126_130545182	3300010396	Terrestrial Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSREAADKRRGS*
Ga0134126_130825301	3300010396	Terrestrial Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAANKRSGS*
Ga0138513_1000402531	3300011000	Soil	MDGKNSALLKDPQPQTSNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRGS*
Ga0151489_11528482	3300011106	Soil	MDGKNSALLKDPQPQTPNPAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0105246_104463611	3300011119	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKAAANRQSDDKPRGS*
Ga0150985_1018274362	3300012212	Avena Fatua Rhizosphere	LLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS*
Ga0150985_1079267682	3300012212	Avena Fatua Rhizosphere	ALLKDPQPQTPNRTPLLLNAAAWLETLAALEEEFKSILTEKTASSRQAADKRRGS*
Ga0150984_1005424471	3300012469	Avena Fatua Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQGADKRGGS*
Ga0150984_1116672482	3300012469	Avena Fatua Rhizosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILTEKTASSRQAADKRRGS*
Ga0157290_102735961	3300012909	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAANRQSDDKPRGS*
Ga0157308_103672701	3300012910	Soil	MDGKSSAVLKDPQDEATSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQ
Ga0157297_105156101	3300012914	Soil	MDGKSSAVLKDPQDEATSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR*
Ga0157310_104315782	3300012916	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKTTSSRQAADKRRGS*
Ga0137394_115582502	3300012922	Vadose Zone Soil	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0137413_102524342	3300012924	Vadose Zone Soil	ALLKESQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0137413_105186061	3300012924	Vadose Zone Soil	MDGKTSALLKDSQRETPSRTPRLLHAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0137413_108964631	3300012924	Vadose Zone Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKAASTRQGADKRGGS*
Ga0137410_106140941	3300012944	Vadose Zone Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS*
Ga0164300_100629112	3300012951	Soil	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILDEKASSNRQTADRRRDR*
Ga0164299_105835241	3300012958	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRGS*
Ga0164302_112913211	3300012961	Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS*
Ga0164305_100042562	3300012989	Soil	MDGKNSALLKDPPPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS*
Ga0157378_122447651	3300013297	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRRAAD
Ga0157375_120245842	3300013308	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTTSSRQAADKRRGS*
Ga0163163_108947692	3300014325	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRGS*
Ga0157380_101846462	3300014326	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKTASSRQATDKRRGS*
Ga0157379_112393312	3300014968	Switchgrass Rhizosphere	DGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0173483_101291492	3300015077	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRR
Ga0173483_101637952	3300015077	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKHRGS*
Ga0132258_112940324	3300015371	Arabidopsis Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQADDKRRGS*
Ga0132257_1007619351	3300015373	Arabidopsis Rhizosphere	GKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSREAADKRRGS*
Ga0190266_109054111	3300017965	Soil	MDGKNSALLKDPQQQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSREAADKRRG
Ga0184610_11176121	3300017997	Groundwater Sediment	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0184634_101039333	3300018031	Groundwater Sediment	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQA
Ga0184620_101180562	3300018051	Groundwater Sediment	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRG
Ga0184621_102976352	3300018054	Groundwater Sediment	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0184616_100438852	3300018055	Groundwater Sediment	MDGKNSALLKDPQPETPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRG
Ga0184609_104802511	3300018076	Groundwater Sediment	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTA
Ga0190269_104695972	3300018465	Soil	KNSALLKDPQQQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSREAADKRRGS
Ga0190270_124812441	3300018469	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAENTASSRQAADKR
Ga0190270_125967801	3300018469	Soil	QSGVGAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRGS
Ga0190274_123181731	3300018476	Soil	KWSSAMDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0190271_101545114	3300018481	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAENTASSRQAADKRRG
Ga0173481_103035382	3300019356	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKTASSRQAADKRRG
Ga0173481_104326582	3300019356	Soil	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDP
Ga0173482_101167031	3300019361	Soil	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR
Ga0173482_101677581	3300019361	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRG
Ga0193704_10634321	3300019867	Soil	MDGKTSALLKDSQRETPSRVETPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0193700_10159623	3300019873	Soil	MDGKTSALLKDSQGETPSRFGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0210381_102346572	3300021078	Groundwater Sediment	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0207713_12231721	3300025735	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRG
Ga0207680_111022851	3300025903	Switchgrass Rhizosphere	MDGKSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQAADR
Ga0207647_102521792	3300025904	Corn Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMAS
Ga0207645_101082951	3300025907	Miscanthus Rhizosphere	MDGKNSALLKDPQSQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKMASSRQAADKRRG
Ga0207671_102780591	3300025914	Corn Rhizosphere	GTWFSEVRPKWSSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS
Ga0207662_1000080012	3300025918	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAANRQADDKRRG
Ga0207689_100147334	3300025942	Miscanthus Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRRAADKRRG
Ga0207667_110985932	3300025949	Corn Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASS
Ga0207712_120128432	3300025961	Switchgrass Rhizosphere	MDGKNSALLKDPQSQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTAANRQADDKRRG
Ga0207668_1000433811	3300025972	Switchgrass Rhizosphere	GKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKMASSRQAADKRRGS
Ga0207668_112367021	3300025972	Switchgrass Rhizosphere	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSR
Ga0207703_122899421	3300026035	Switchgrass Rhizosphere	GKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0257163_10183251	3300026359	Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRES
Ga0208997_10191982	3300027181	Forest Soil	MDGKTSALLKDSQRETPSRTPRLLNAAAWLETLTALEEEFKSILAEKTASTRQAADKRRD
Ga0209813_100768461	3300027866	Populus Endosphere	MDGKNSALLKAPQPETPNRTGTPRLLNAAAWLETLAALEEEFKSILAEKTAATRQAADKRRGS
Ga0247822_106382651	3300028592	Soil	MDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRG
Ga0307295_100075481	3300028708	Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKR
Ga0307303_100073063	3300028713	Soil	SALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0307309_101796672	3300028714	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRG
Ga0307301_100220671	3300028719	Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADK
Ga0307318_100478343	3300028744	Soil	LQGSIAMDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0307316_100539661	3300028755	Soil	MDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTAS
Ga0307316_102006721	3300028755	Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAA
Ga0307288_102739521	3300028778	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRG
Ga0307306_101253271	3300028782	Soil	MDGKNSALLKDPQPETPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAA
Ga0307282_100796511	3300028784	Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAAD
Ga0307299_100190742	3300028793	Soil	MDGKTSALLEDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0307281_100430242	3300028803	Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQTADKRRDS
Ga0307305_100193544	3300028807	Soil	SLSKARLEGNIAMDGKTSALLKDSQRETPSRVETPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0307305_104360281	3300028807	Soil	MDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRD
Ga0307294_100423821	3300028810	Soil	SSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0307302_102318921	3300028814	Soil	RLQGSSAMDGKTSALLKDSQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0307312_107809631	3300028828	Soil	SALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0307314_102550392	3300028872	Soil	MDGKNSALLKDPQPQTPNRTPRLLNAAAWLETLAALEEEFKSILAEKTASSRQATDKRRG
Ga0307308_103376221	3300028884	Soil	ANSVSKARLEGSIAMDGKTSALLKDSQGETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0308191_10367042	3300031098	Soil	GNSLSKARLEGSIAMDGKTSALLKDSQRETPSRVGAPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0307498_102797391	3300031170	Soil	MDGKNSALLKDPPPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRG
Ga0307500_103140631	3300031198	Soil	WFSEARPKWSSAMDGKNSALLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS
Ga0307497_100112773	3300031226	Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKRRDS
Ga0170824_1177532911	3300031231	Forest Soil	MDGKTSALLKESQRETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0170824_1268220662	3300031231	Forest Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQTANKRDS
Ga0170819_104667531	3300031469	Forest Soil	MDGKTSALLKDSERETPSRVGTPRLLNAAAWLETLAALEEEFKSILAEKTASTRQAADKHRDS
Ga0307468_1007311772	3300031740	Hardwood Forest Soil	GKNSALLKDPQPQTPNRAPRLLNAAAWLQTLAALEEEFKSILAEKMASSRQAADKRRGS
Ga0310892_101940362	3300031858	Soil	KSSAVLKDPQDETTSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDR
Ga0310906_109676791	3300032013	Soil	LLKDPQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRHGS
Ga0247829_106811121	3300033550	Soil	MDGKSSAVLKDPQDEATSRVGTPRLLNAAAWLETLAALEEEFKAILNEKASSNRQTADRRRDP
Ga0364923_0051657_823_975	3300034690	Sediment	PQPQTPNRAPRLLNAAAWLETLAALEEEFKSILAEKTASSRQAADKRRGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences