NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F047390

Metagenome Family F047390

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F047390
Family Type Metagenome
Number of Sequences 150
Average Sequence Length 106 residues
Representative Sequence GMTFTINSLNGVPRTTTVSIRSTSASLGGGKVIGDLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Number of Associated Samples 136
Number of Associated Scaffolds 150

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 85.33 %
% of genes from short scaffolds (< 2000 bps) 76.67 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(31.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.333 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.29%    β-sheet: 36.64%    Coil/Unstructured: 61.07%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.2.3.5: Bacterial adhesinsd1zk5a_1zk50.65
b.121.1.1: PHM/PNGase Fd3pmsa23pms0.64
b.121.4.2: Positive stranded ssRNA virusesd1a6ca11a6c0.63
b.121.4.0: Positive stranded ssRNA virusesd5aooc_5aoo0.63
b.121.5.2: ssDNA virusesd1s58a_1s580.62


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 150 Family Scaffolds
PF10633NPCBM_assoc 26.00
PF13432TPR_16 0.67
PF13633Obsolete Pfam Family 0.67



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.00 %
UnclassifiedrootN/A14.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_10577848All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1554Open in IMG/M
3300001328|A1065W6_1103365All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes509Open in IMG/M
3300001361|A30PFW6_1367829All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1336Open in IMG/M
3300001536|A1565W1_10373618All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium747Open in IMG/M
3300001536|A1565W1_11374760All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium648Open in IMG/M
3300001664|P5cmW16_1049007All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium746Open in IMG/M
3300004114|Ga0062593_100497183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1129Open in IMG/M
3300004114|Ga0062593_103108867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes531Open in IMG/M
3300004153|Ga0063455_101137938All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes580Open in IMG/M
3300004480|Ga0062592_101097405All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium736Open in IMG/M
3300004643|Ga0062591_102077906All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes588Open in IMG/M
3300005093|Ga0062594_100039344All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2286Open in IMG/M
3300005177|Ga0066690_10241364All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1211Open in IMG/M
3300005178|Ga0066688_10671541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium661Open in IMG/M
3300005179|Ga0066684_10298678All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1069Open in IMG/M
3300005181|Ga0066678_10186186All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1319Open in IMG/M
3300005295|Ga0065707_11012603All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes536Open in IMG/M
3300005330|Ga0070690_100009713All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes5581Open in IMG/M
3300005364|Ga0070673_102283735All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes514Open in IMG/M
3300005441|Ga0070700_100819393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes751Open in IMG/M
3300005444|Ga0070694_101170858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium643Open in IMG/M
3300005456|Ga0070678_100184242All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1712Open in IMG/M
3300005468|Ga0070707_100894325All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium852Open in IMG/M
3300005536|Ga0070697_100186014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1761Open in IMG/M
3300005536|Ga0070697_100507548All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1055Open in IMG/M
3300005536|Ga0070697_101689417All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes566Open in IMG/M
3300005546|Ga0070696_100746653All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium801Open in IMG/M
3300005558|Ga0066698_11099121All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes503Open in IMG/M
3300005560|Ga0066670_10438329All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium805Open in IMG/M
3300005561|Ga0066699_10851696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes639Open in IMG/M
3300005564|Ga0070664_101804531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes580Open in IMG/M
3300005718|Ga0068866_10192306All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1213Open in IMG/M
3300005843|Ga0068860_101426456All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes714Open in IMG/M
3300006172|Ga0075018_10836033All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes507Open in IMG/M
3300006796|Ga0066665_10805508All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes740Open in IMG/M
3300006881|Ga0068865_100532273All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium984Open in IMG/M
3300006894|Ga0079215_10703734All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes684Open in IMG/M
3300006918|Ga0079216_10953914All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes655Open in IMG/M
3300007788|Ga0099795_10408232All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium618Open in IMG/M
3300007819|Ga0104322_137533All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2000Open in IMG/M
3300007820|Ga0104324_108417All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1152Open in IMG/M
3300009012|Ga0066710_100788622All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1455Open in IMG/M
3300009029|Ga0066793_10076995All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1915Open in IMG/M
3300009029|Ga0066793_10787399All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes540Open in IMG/M
3300009137|Ga0066709_100751198All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1408Open in IMG/M
3300010326|Ga0134065_10346895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes582Open in IMG/M
3300010364|Ga0134066_10402319All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes522Open in IMG/M
3300011431|Ga0137438_1207802All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes595Open in IMG/M
3300012001|Ga0120167_1106389All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes570Open in IMG/M
3300012004|Ga0120134_1069227All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes634Open in IMG/M
3300012004|Ga0120134_1082938All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium587Open in IMG/M
3300012011|Ga0120152_1007183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium5091Open in IMG/M
3300012189|Ga0137388_12043081All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes501Open in IMG/M
3300012198|Ga0137364_11417852All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes514Open in IMG/M
3300012208|Ga0137376_10654749All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium907Open in IMG/M
3300012211|Ga0137377_10395686All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1319Open in IMG/M
3300012285|Ga0137370_10871848All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300012285|Ga0137370_11033943All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes505Open in IMG/M
3300012469|Ga0150984_115432960All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1105Open in IMG/M
3300012683|Ga0137398_10033128All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2945Open in IMG/M
3300012925|Ga0137419_10010337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium5020Open in IMG/M
3300012927|Ga0137416_11134616All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes702Open in IMG/M
3300012961|Ga0164302_11258619All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes595Open in IMG/M
3300013294|Ga0120150_1010824All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1946Open in IMG/M
3300013294|Ga0120150_1020268All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1360Open in IMG/M
3300013297|Ga0157378_10080318All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2946Open in IMG/M
3300013501|Ga0120154_1018965All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1808Open in IMG/M
3300013763|Ga0120179_1118884All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes581Open in IMG/M
3300013764|Ga0120111_1010167All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2923Open in IMG/M
3300013764|Ga0120111_1155905All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes519Open in IMG/M
3300013772|Ga0120158_10084808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1972Open in IMG/M
3300013832|Ga0120132_1052002All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium795Open in IMG/M
3300015080|Ga0167639_1053033All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes502Open in IMG/M
3300015371|Ga0132258_10017211All Organisms → cellular organisms → Bacteria15599Open in IMG/M
3300015374|Ga0132255_100508427All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1771Open in IMG/M
3300018028|Ga0184608_10137485All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1046Open in IMG/M
3300018054|Ga0184621_10337777All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes530Open in IMG/M
3300018431|Ga0066655_11243373All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes530Open in IMG/M
3300018433|Ga0066667_12001742All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes532Open in IMG/M
3300018476|Ga0190274_10756027All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1024Open in IMG/M
3300018482|Ga0066669_11306177All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes656Open in IMG/M
3300019865|Ga0193748_1029432All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes514Open in IMG/M
3300019868|Ga0193720_1064091All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes506Open in IMG/M
3300019869|Ga0193705_1030993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1149Open in IMG/M
3300019890|Ga0193728_1022602All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3147Open in IMG/M
3300020002|Ga0193730_1065541All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1039Open in IMG/M
3300020006|Ga0193735_1011710All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2760Open in IMG/M
3300020022|Ga0193733_1095591All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium831Open in IMG/M
3300020022|Ga0193733_1147903All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes636Open in IMG/M
3300021080|Ga0210382_10259746All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium761Open in IMG/M
3300021080|Ga0210382_10274288All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium740Open in IMG/M
3300021344|Ga0193719_10052126All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1772Open in IMG/M
3300021363|Ga0193699_10143642All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium980Open in IMG/M
3300021363|Ga0193699_10471956All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes515Open in IMG/M
3300021972|Ga0193737_1001426All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3165Open in IMG/M
3300023046|Ga0233356_1033878All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes621Open in IMG/M
3300025481|Ga0208079_1027449All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1582Open in IMG/M
3300025919|Ga0207657_10447453All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1014Open in IMG/M
3300025920|Ga0207649_10160297All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1558Open in IMG/M
3300025921|Ga0207652_10943047All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium761Open in IMG/M
3300025930|Ga0207701_10605359All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium933Open in IMG/M
3300025938|Ga0207704_10817703All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium779Open in IMG/M
3300025944|Ga0207661_10181504All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1839Open in IMG/M
3300025945|Ga0207679_11616520All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes594Open in IMG/M
3300025949|Ga0207667_11145183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes759Open in IMG/M
3300025960|Ga0207651_11151072All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes696Open in IMG/M
3300026023|Ga0207677_12129810All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes522Open in IMG/M
3300026121|Ga0207683_10631500All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium992Open in IMG/M
3300026273|Ga0209881_1078023All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium820Open in IMG/M
3300026331|Ga0209267_1237865All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes651Open in IMG/M
3300026538|Ga0209056_10377297All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium902Open in IMG/M
3300026538|Ga0209056_10693471All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes515Open in IMG/M
3300026542|Ga0209805_1387218All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes537Open in IMG/M
3300027395|Ga0209996_1054617All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes608Open in IMG/M
3300027691|Ga0209485_1041282All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1153Open in IMG/M
3300027787|Ga0209074_10174850All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium790Open in IMG/M
3300028047|Ga0209526_10992789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes502Open in IMG/M
3300028381|Ga0268264_12653145All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes505Open in IMG/M
3300028711|Ga0307293_10038576All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1464Open in IMG/M
3300028793|Ga0307299_10061856All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1385Open in IMG/M
3300028807|Ga0307305_10480337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes558Open in IMG/M
3300028811|Ga0307292_10063436All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1403Open in IMG/M
3300028819|Ga0307296_10094423All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1600Open in IMG/M
3300028824|Ga0307310_10010827All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3482Open in IMG/M
3300028828|Ga0307312_10146231All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1496Open in IMG/M
3300028828|Ga0307312_10473164All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium826Open in IMG/M
3300028881|Ga0307277_10034922All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2014Open in IMG/M
3300028884|Ga0307308_10621726All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300034268|Ga0372943_0127045All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1528Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.00%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost12.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.33%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.67%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.33%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.33%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.33%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.33%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.33%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.67%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.67%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.67%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.67%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil0.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.67%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.67%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.67%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.67%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001328Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001361Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001407Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012EnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300007820Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 SoapdenovoEnvironmentalOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012001Permafrost microbial communities from Nunavut, Canada - A24_80cm_12MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300015080Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300023046Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MSEnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026273Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027395Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_190125123300000033SoilIRSTSASLGSGKAIGELQWRRSDLAVWNSITLTDTQVEQRVQIRNGLNDPWSNTIFFRMLLDWTTDPPATYXGNYVITLSQTVP*
JGI10214J12806_1057784833300000891SoilLTVAGGTVTFPAPTAADYIAGFVNAPAGATFTINSVNGVQRTTTVSIRSISASLGGGKVLGDLQWRRSDLATWNSITLADTQIEQRVVVNKGLNDPWGNTIFFRMVLDWTTDPPATYSGTYQITLSQTVP*
JGI10216J12902_10714958213300000956SoilIRSTSASLGGGKVIGDLQWRRSDLATWNSITLADAQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDGPATYSATYQITLSQTVP*
A1065W6_110336523300001328PermafrostAATGVTFTINSVNGAQRTTTVSVRSISASLGGGKVIGDLQWRRSDLATWNSVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPATYTASYQITLSQTVP*
A30PFW6_136782913300001361PermafrostTFPAPTAADYIAGYVNSATGVTFTVNAQSGASRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQVEQMIVVRNGINDPWNNTIFFRMILNWATDAPATYAANYTITLSQTVP*
JGI20192J14887_100828123300001407Arctic Peat SoilSTSANLGGGKIIGDLQWRRSDLATWNSISLTDTQVEQRVMVRNGLNDPWSNTIFFRMVLTWATDAPATYSANYQITLSQTVP*
A1565W1_1037361813300001536PermafrostTGTSRTTTVSIRSSSTDLGGGKVIGDLEWRRSDLATWNNITLTDAQVDQKIVVRGVLNDPWSNTIFFRMLLNWTTDAPATYSGNYVITLSQTVP*
A1565W1_1137476013300001536PermafrostTFTINSVNGAQRTTTVSVRSISASLGGGKVIGDLQWRRSDLATWNSVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPATYTASYQITLSQTVP*
A10PFW1_1066949923300001538PermafrostTSANLGGAKVIGDLEWRRSDLATWNAITLTDAQVEQRIVVKGVINDPWSNTIFFRMILNWATDAPATYSANYTITLSQTVP*
P5cmW16_104900713300001664PermafrostDGAQRTTTISIRSISTNLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLNWTTDAPATYSGTYQITLSQTVP*
Ga0062593_10049718313300004114SoilGVTFTINSQNGLTRTTTISIRSTSGSMGGGKVIGDLEWRRSDLATWNTMTLSDAQVEQRLVVNKGLNDPWSNTIFFRLKLNWTTDAPGTYTANYEITLAQTVP*
Ga0062593_10310886723300004114SoilLFTIDATNGGSRTTTISIRTTSPNLGGSKVIGDLQWRRSDLATWSSISLTDAQVEQRIVVSKGLNDPWSNTIFFRMILNWATDAPGTYSGSYTITLSQTVP*
Ga0063455_10113793813300004153SoilATDYVNGYVYSTGGVGFTVDASNGNQSHTTTVRIKATSANLGNGKIIGDLEWRRSDLTGWTPLALTDAQVEQRVQVRGGLNDPWSNTIFFRLKLTWTIDAPGTYVGNYQITLSQTVP*
Ga0062592_10109740523300004480SoilSSTGVTFTINSQSGPQRTTVASIRATSASLGNGKLIGDLKWRRSDLATWNDVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMSLSWTSDAPATYAANYVITLSQTVP*
Ga0062591_10207790613300004643SoilAVLLRSTSANLGNGKILGDLQWRRSDLTTWNSITVTDAQVEQRVQVRNGLNDPWSNTIYFRMILNWTTDSPATYSANYQITLSQTVP*
Ga0062594_10003934413300005093SoilINGFVNSTTGVTFTVDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP*
Ga0066690_1024136423300005177SoilTAADYIAGFVNSTTGATLSVAAQTGASRTTTISIRSTSADLGNGKVIGDLQWRRSDLATWNSITLTDAQVEQRVVVRNALNDPWNNTIFFRMVLNWTSDAPATYSANYQITLSQTVP*
Ga0066688_1067154123300005178SoilAGFVNSTTGATFTVAAQTGASRTTTISIRSTSADLGNGKLIGDLEWRRSDLATWNSITLTDAQVEQRVVVRNALNDPWNNTIFFRMVLNWTSDAPATYSANYQITLSQTVP*
Ga0066684_1029867823300005179SoilTAADYIAGFVNSTGGVTFTVNSQNGVQRTTTITVRSTSADLGNGKMIGDLQWRRSDLATWNSITLTDAQVEQRIVINKVLNDPWSNTIFFRLVLNWTSDGPATYSANYQLTLSQTVP*
Ga0066678_1018618623300005181SoilTAADYIAGFVNSTTGATFTVAAQTGASRTTTISIRSTSADLGNGKVIGDLQWRRSDLATWNSITLTDAQVEQRVVVRNALNDPWNNTIFFRMVLNWTSDAPATYSANYQITLSQTVP*
Ga0066675_1010760613300005187SoilRSTSADLGNGKVIADLEWRRSDLATWNSITLTDAQVEQKVVIRGALNDPWSNTIFFRMVLNWTSDAPATYSTNYQITLSQTVP*
Ga0065707_1101260313300005295Switchgrass RhizospherePTAADYIAGFIDSSTGATFTINSQNGVQRTTMISIRATSASLGNGKLIGDLQWRRSDLATWNDVTLTDAQVEQRIVVNKVLNDPWSNTIFFRMALSWTSDAPATYSANYVITLSQTVP*
Ga0070690_10000971373300005330Switchgrass RhizosphereFPAPTATDYINGFVNSTTGVTFTVDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP*
Ga0070673_10228373513300005364Switchgrass RhizosphereNGTQSHTTTISIRATSANLGGSKALGDLEWRRSDLAGWSAITSTDAQVEQKVMIRGQLNDPWGNTVFFRMKLSWTADPPATYSANYQITLSQTVP*
Ga0070700_10081939323300005441Corn, Switchgrass And Miscanthus RhizosphereSLTLAGGTITFPAPTAADFVNGFVNSATGVTFTVDASAGNQSHTTTVLLRSTSANLGNGKFIGDLQWRRSDLTTWNSITLTDAQVEQRVQVRNGLNDPWSNTIYFRMILNWTTDSPATYSANYQITLAQTVP*
Ga0070694_10117085813300005444Corn, Switchgrass And Miscanthus RhizosphereSVNGIQRTTTVTIRSTSANLGNGKVIGDLQWRRSDLATWNSITLTDSQVEQRIVINKALNDPWSNTIFFRMALNWTTDAPATYTANYQLTLAQTVP*
Ga0070678_10018424213300005456Miscanthus RhizosphereRTTTVSIRSTSASLGNGKVLGDLQWRRSDLATWSSITQTNAQVEQRIVINKGLNDPWSNTVFFRMLLNWTSDAPATYTANYQITLSQTVP*
Ga0070707_10089432513300005468Corn, Switchgrass And Miscanthus RhizosphereLSATQGNISHTTTVSIRSTSANLGGGKVIADLQWRRSDLATWNSISLTDAQVEQKIMVRNVLNDPWSNTIFFRMILHWTTDAPGTYSANYQLTLSQTVP*
Ga0070697_10018601423300005536Corn, Switchgrass And Miscanthus RhizosphereGGTITFPAPTAADYIAGFVNSTGGATFTVNSVNGIQRTTTVSIRSTSTDLGNGKLIGDLQWRRSDLVTWNSISLTDAQVEQRIVINKGLNDPWSNTIFFRMVLTWTTDAPATYAANYQITLSQTVP*
Ga0070697_10050754813300005536Corn, Switchgrass And Miscanthus RhizosphereTGGTITFPAPTAADYIAGFVNSTGGATFTINSVNGIQRTTTVSIRSTSTDLGNGKLIGNLQWRRSDLATWNSITLTDAQVEQRVVINKVLNDPWSNTIFFRMVLNWTTDAPATYSANYQITLSQTVP*
Ga0070697_10168941713300005536Corn, Switchgrass And Miscanthus RhizosphereTFTVDASGGNQSHTTTILIRSTSANLGNGKVIGDLQWRRSDLGTWNSITLTDAQVEQRVQVRNGQNDPWSNTIFFRMLLSWTTDGPATYSANYQITLSQTVP*
Ga0070696_10074665313300005546Corn, Switchgrass And Miscanthus RhizosphereNGLARTTTISIRSTSADLGNGKVIGDLQWRRSDLATWNSITLTDAQVEQRILINKGLNDPWGNTIFFRMVLNWTTDAPATYSANYQITLSQTVP*
Ga0066698_1109912123300005558SoilFTAPTAADYIAGFINSTAGVTFTVDAQTGASRTTTISIRSTSPDLGGGKVLGDLQWRRSDLATWNTITVTEAQVEQRIVVRNVSNDPWSNTIFFRMTLNWTADPPGTYSANYQITLSQTVP*
Ga0066670_1043832923300005560SoilSPTAADYIAGFVNSTGGVTFTVNSQNGVQRTTTITVRSTSADLGNGKMIGDLQWRRSDLATWNSITLTDAQVEQRIVINKVLNDPWSNTIFFRLVLNWTSDGPATYSANYQLTLSQTVP*
Ga0066699_1085169613300005561SoilFPAPTAADYMAGFVNSAGGATFTVNSVNGLQRTTTVSIRSTSTDLGNGKLIGDLQWRRSDLATWNSITLTDAQLEQRIVINKGLNDPWGNTIFFRMVLNWTTDAPATYAANYQITLSQTVP*
Ga0070664_10180453113300005564Corn RhizosphereTNGGSRTTTISIRTTSANLGSGKVIGDLQWRRSDLATWNSISLTDAQVEQRIVVAKGLNDPWSNTIFFRMILNWATDAPATYSGSYTITLSQTVP*
Ga0068866_1019230623300005718Miscanthus RhizosphereDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIFFRMVLNWTSDAPATYSANYQVTLSQTVP*
Ga0068860_10142645623300005843Switchgrass RhizosphereTVDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP*
Ga0075018_1083603323300006172WatershedsGTGVTFTLNAQTGTSRTTTVSIRSISADLGGGKVIGDLQWRRSDLATWNSITLTDAQVEQRVQVRGGANDPWSNTIFFRMVLNWTTDAPATYSGTYQITLSQTVP*
Ga0066665_1080550823300006796SoilFPAPTAADYIAGFINSAAGATFTVDATSGTSRTTTVSIRSTSANLGGGKVIGDLRWRRSDLATWNSITLTDAQVEQRIVVRNGSNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP*
Ga0068865_10053227323300006881Miscanthus RhizosphereFTINSTNGVQRTTTVSIRSTSASLGNGKVLGDLQWRRSDLATWSSITQTNAQVEQRIVVNKGLNDPWSNTVFFRMLLNWTSDAPATYTANYQITLSQTVP*
Ga0079215_1070373423300006894Agricultural SoilPTANDYVAGFVNSTSGVTFTVDATNGNQSHTTTILIRAISASLGGGKVIGDLQWRRSDLTIWTSMSPTDAQVEQRVQVRNGLNDPWSNTIFFRLLLNWTTDPPATYTADYQITLSQTVP*
Ga0079216_1095391423300006918Agricultural SoilGGTITFPAPTANDYAAGFVNSTSGVTFTVDATNGNQSHTTTILIRATSASLGGGKVIGDLQWRRSDLTAWTSIAPTDAQVEQRVQVRNGLNDPWSNTIFFRLLLNWTTDGPATYSANYEITLSQTVP*
Ga0099795_1040823213300007788Vadose Zone SoilGMTFTINSTNGPQRTTTISIRSISANLGGGKVIADLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLNWTTDAPATYSGTYEITLSQTVP*
Ga0104322_13753313300007819Permafrost SoilDYINGYVNSTTGVLFTINSLNGVNRTTTISIRTTSADLGGGKAIADLQWRRSDLATWNSISLTDAQVEQRVVVNKGLNDPWSNTIFFRMNLNWATDAPATYSGSYTITLSQTVP*
Ga0104324_10841723300007820SoilTFTAPTAADYVAGHVDAATGVTFTINAQTGTSRTTTIAIRSSSANLGGGKVLGDLQWRRSDLATWNSITLTDAQVEQRIVVRSTLNDPWSNTIFFRMILSWTTDAPATYSANYVITLSQTVP*
Ga0104323_10761513300007821SoilISASLGGGKVIGDLQWRRSDLATWNSVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPATYTASYQITLSQTVP*
Ga0066710_10078862223300009012Grasslands SoilADYIAGFINSTSGLTFTVDAQTVVSRTTTISIRSTSANLGGGKVLGDLQWRRSDLASWNSITVTDAQVEQRVVVRNVSNDPWSNTIFFRIILNWTADVPGTYSANYQVTLAQTVP
Ga0066793_1007699513300009029Prmafrost SoilTITFAAPTAADYIAGFINSGTGVTFTLNAQTGASRTTTISIRSISASLGSGKVIGDLQWRRSDLATWNSITLTDAQVEQRVQVRSGLNDPWSNTIFFRMVLTWATDAPATYSANYQITLSQTVP*
Ga0066793_1078739913300009029Prmafrost SoilAADYTAGFINSATGVTFTLNAQTGASRTTTISIRSTSASLGNGKVIGDLQWRRSDLATWNSITLTDAQVEQRVQVRNGLNDPWSNTIFFRMVLTWTTDAPATYSATYQVTLSQTVP*
Ga0066709_10075119823300009137Grasslands SoilTTISIRSTSANLGGGKVLGDLQWRRSDLATWNSITVTDAQVEQRVVVRNVSNDPWSNTIFFRIILNWTADVPGTYSANYQVTLAQTVP*
Ga0126309_1012974123300010039Serpentine SoilTSASLGGGKAIGELQWRRSDLAVWNSITLTDAQVEQRVQVRNGLNDPWSNTIFFRMLLDWTTDPPATYAGNYVITLTQTVP*
Ga0134067_1039576023300010321Grasslands SoilVRSTSADLGNGKMIGDLQWRRSDLATWNSITLTDAQVEQRIVINKVLNDPWSNTIFFRLVLNWTSDGPATYSANYQLTLSQTVP*
Ga0134084_1025912213300010322Grasslands SoilIRSTSASLGGTKVIGDLQWRRSDLATWNSITLTDAQIEQRIVVRNASNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP*
Ga0134065_1034689513300010326Grasslands SoilTFTVNSQNGVQRTTTITVRSTSADLGNGKMIGDLQWRRSDLATWNSITLTDAQVEQRIVINKVLNDPWSNTIFFRLVLNWTSDGPATYSANYQLTLSQTVP*
Ga0134066_1040231923300010364Grasslands SoilTTISIRSTSADLGNGKVIADLEWRRSDLATWNSITLTDAQVEQKVVIRGALNDPWSNTIFFRMVLNWTSDAPATYSTNYQITLSQTVP*
Ga0134127_1192460713300010399Terrestrial SoilRSTSASLGSGKAIGELQWRRSDLAVWNSITLTDSQVEQRVQIRNGLNDPWSNTIFFRMLLNWTTDPPATYTGNYVITLTQTVP*
Ga0137438_120780213300011431SoilSFPAPTAADYTNGFVDDPTGMTFTINSINGAQRTTTVSIRSISASLGGGKVIGDLKWRRSDLATWNSVSLTDAQVEQRVVVNKGLNDPWSNTIFFRMILSWTTDAPATYSGTYQITLSQTVP*
Ga0120167_110638923300012001PermafrostVTFTINSVNGAQRTTTVSVRSISASLGGGKVIGDLQWRRSDLATWNSVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPATYTASYQITLFANGAVISFRRAGLSALSL
Ga0120134_106922713300012004PermafrostVTFTINAQTGTTRTTIVALRSSSTDLGGGKVLGDLQWRRSDLATWNSITLTDAQVEQRMVVRSTLNDPWSNTICCRMILSWTTDAPATYSANYVITLSQTVP*
Ga0120134_108293813300012004PermafrostGMTFTINSLNGVPRTTTVSIRSTSASLGGGKVIGDLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP*
Ga0120152_100718363300012011PermafrostPTAADYIAGYVNSATGVTFTVNAQSGASRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQVEQMIVVRNGINDPWNNTIFFRMILNWATDAPATYAANYTITLSQTVP*
Ga0137388_1204308123300012189Vadose Zone SoilSRTTTISIRSTSASLGNGKVIGDLEWRRSDLATWNSITLTDAQVEQRVVVKGVLNDPWTNTIFFRMKLAWTTDAPATYSGNYQITLSQTVP*
Ga0137364_1141785223300012198Vadose Zone SoilYIAGYIDSPTGVSFTLSAQTGTSRTTSVSIRSTSASLGGAKAIGDLEWRRSDLANWNPITLIDAQVEQRIQVRGVLNDPWTNTIFFRMVLNWTTDAPATYSANYQITLSQTVP*
Ga0137376_1065474923300012208Vadose Zone SoilRTTTISIRSTSADLGNGKVIGDLQWRRSDLATWNSITLTDAQVEQRVVVRNALNDPWNNTIFFRMVLNWTSDAPATYSANYQITLSQTVP*
Ga0137377_1039568613300012211Vadose Zone SoilHTTTVSIRSTSANLGGGKIIGDLQWRRSDLATWNSISLSDSQVEQKIMIRSVLNDPWSNTIFFRMILHWTTDAPATYSANYQITLSQTVP*
Ga0137370_1087184813300012285Vadose Zone SoilAGATITFNAPTAADYIAGYIDSPTGVSFTLSAQTGTSRTTTVSIRSTSASLGGAKAIGDLEWRRSDLAIWNPITLIDAQVEQRIQVRGVLNDPWTNTIFFRMLLNWTTDAPATYSANYQITLSQTVP*
Ga0137370_1103394313300012285Vadose Zone SoilTTISIRSTSANLGGGKVLGDLQWRRSDLASWNSITVTDAQVEQRVVVRNVSNDPWSNTIFFRIILNWTADVPGTYSANYQVTLAQTVP*
Ga0150984_11543296023300012469Avena Fatua RhizosphereFPAPTAADYIAGFVTATPGVTFTVASGSGAQRTTTISIRSTSPSLGNGKAIGDLEWRRSDLAVWNAITTTNAQVEQRIVINKGLNDPWNNTIFFRMALSWTSDGPATYTANYQITLSQTVP*
Ga0137398_1003312813300012683Vadose Zone SoilPTATDYINGFVDAATAVSYTLSATQGNASHTTTVSIRSTSANLGGGKIIGDLEWRRSDLATWNSMSLTDSQVEQKIMIRSVLNDPWSNTIFFRMILHWTTDAPGTYSANYQVTLSQTVP*
Ga0137419_1001033713300012925Vadose Zone SoilADYIAGFIDASTGATFALNAQTGTSRTTTISIRSTSASLGNGKVIGDLQWRRSDLATWNNITLTDAQVEQRILVRGVLNDPWSNTIFFRMKLAWATDAPATYAGNYQITLSQTVP*
Ga0137416_1113461613300012927Vadose Zone SoilATDYIAGFVNAATGVTFALNAQTGTSRTTTIAIRSSSANLGGGKVIGDLQWRRSDLVTWNSITLTDAQVEQRILVRGVLNDPWSNTIFFRMVLNWTSDAPATYSANYVITLSQTVP*
Ga0164302_1125861923300012961SoilTAADYIAGFVNSSGGATFTVGTQNGASRTTTILIRATSASLGNGKVIGDLQWRRSDLATWNDITLTDTQVEQRIVVRNGLNDPWSNTIFFRMKLSWTTDAPGTYAANYQVTLAQTVP*
Ga0120150_101082423300013294PermafrostVNAQSGASRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQVEQMIVVRNGINDPWNNTIFFRMILNWATDAPATYSANYTITLSQTVP*
Ga0120150_102026813300013294PermafrostATVSIRSSSTDLGGGKVIGDLEWRRSDLATWNNITLTDAQVDQKIVVRGVLNDPWSNTIFFRMLLNWTTDAPATYSGNYVITLSQTVP*
Ga0157378_1008031823300013297Miscanthus RhizosphereTFTVSSLNGLQRTTTISIRSLSANLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRTVINKVLNDPWSNTIFFRMLLNWTTDPPATYSGTYQITLSQTVP*
Ga0120154_101896523300013501PermafrostTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQVEQMIVVRNGINDPWNNTIFFRMILNWATDAPATYSANYTITLSQTVP*
Ga0120179_111888423300013763PermafrostFTVNAQTGTSRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQIEQRIVVRGVTNDPWNNTIFFRMILNWVTDAPATYSANYTITLSQTVP*
Ga0120111_101016713300013764PermafrostSRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQIEQRIVVRGVANDPWNNTIFFRMILNWVTDAPATYSANYTITLSQTVP*
Ga0120111_115590513300013764PermafrostNAQSGASRTTTISIRSTSANLGGGKVIGDLEWRRSDLATWNTITLTDAQVEQMIVVRNGINDPWNNTIFFRMILNWATDAPATYSANYTITLSQTVP*
Ga0120158_1008480813300013772PermafrostGVTFTLSAQTGTSRTTTVSIRSSSTDLGGGKVIGDLEWRRSDLATWNNITLTDAQVDQKIVVRGVLNDPWSNTIFFRMLLNWTTDAPATYSGNYVITLSQTVP*
Ga0120132_105200213300013832PermafrostINSLNGAQRTTTISIRSISTNLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLNWTTDAPATYSGTYQITLSQTVP*
Ga0167639_105303313300015080Glacier Forefield SoilSGQVITFPAPTAADYINGFVNSATGVTYTVNATNGGQSHTTTVLIRATSANLGGGKVLADLQWRRSDLATWNSITSVNAAVEARIVVRNVLNDPWNNTIFFRMILLWATDPNATRSANYSITLSQTVP*
Ga0132258_1001721113300015371Arabidopsis RhizosphereTGVTFTVNSTNGLQRTTTISIRSTSANLGNGKVIGDLQWRRTDLANWNSITLTDAQVEQRIVINKGLNDPWSNTIFFRMVLNWTTDAPATYSANYQITLSQTVP*
Ga0132255_10050842723300015374Arabidopsis RhizosphereGGTITFPAPTATDYINGFVNSTTGVTFTVDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP*
Ga0184608_1013748513300018028Groundwater SedimentTVAFPAPTAADYIAGFVDASTGATFTINSLNGVPRTTTISIRSTSASLGGSKVIGDLQWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWGNTIFFRMLLNWTSDGPATYSANYQITLSQTVP
Ga0184621_1033777723300018054Groundwater SedimentLSVTGGTVAFPAPTAADYIAGYIDASTGATFTINSLNGVPRTTTISIRSTSASLGTGKVIGDLQWRRSDLATWNSITLTDTQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDAPATYSANYQITLSQTVP
Ga0066655_1124337313300018431Grasslands SoilLITFPAPTATDYINGYVYSTSGVTYTVNATNGSASHTTTVLIQATSASLGNGKLLADLEWRRSDLASWNAISATNTQVEQKVMVLNLLNDPWSNTIFFRMKLSWTTDAPAIYAANYQVTLSQTVP
Ga0066667_1200174213300018433Grasslands SoilINSTSGVTFTVDAQTGVSRTTTISIRSTSANLGGGKVLGDLQWRRSDLATWNSITVTDAQVEQRVVVRNVSNDPWSNTIFFRIILNWTADVPGTYSANYQVTLAQTVP
Ga0190274_1075602713300018476SoilAQTGAGASRTTTISIRSTSASLGSGKAIGELQWRRSDLAVWNSITLVDTQVEQRVQIRNGLNDPWSNTIFFRMLLDWTTDPPATYTGNYVITLTQTVP
Ga0066669_1130617713300018482Grasslands SoilTFTVNSQNGVQRTTTITVRSTSADLGNGKMIGDLQWRRSDLATWNSITLTDAQVEQRIVINKALNDPWSNTIFFRLVLNWTSDGPATYSANYQLTLSQTVP
Ga0193748_102943213300019865SoilDAPTGMTFTINSVNGLQRTTTVSIRSISANLGGGKAIADLEWRRSDLATWNSITLTDSQVEQRIVINKGLNDPWSNTIFFRMVLNWTTDAPATYSGTYQITLSQTVP
Ga0193720_106409123300019868SoilVTFPAPTAADYVAGYVDAPTGMTFTLSAQTGTSRTTTVAIRSSSANLGGGKVIGDLKWRRSDLATWNSITLTDAQIEQRIVVRGTSNDPWSNTIFFRLLLSWTTDAPATYTANYVITLSQTVP
Ga0193705_103099313300019869SoilNGLARTTTISIRSTSASLGGSKVIGDLQWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWSNTIFFRMLLNWTSDGPATYSANYQITLSQTVP
Ga0193744_101960823300019874SoilRSISASLGGGKVIGDLQWRRSDLATWNSITLTDTQIEQRVVVNKGLNDPWSNTIFFRMVLDWTTDAPATYSGTYQITLSQTVP
Ga0193728_102260223300019890SoilTTVSIRSTSASLGGGKVIGDLQWRRSDLATWNSVALTDAQVEQQIVVNKGLNDPWSNTIFFRMILNWTTDAPATYSGNYQITLSQTVP
Ga0193730_106554123300020002SoilGVPRTTTVSIRSTSASIGGGKSIGDLQWRRSDLATWNSVTLTDAQLEQQIVVNKGLNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0193735_101171013300020006SoilFTINSLNGLPRTTTVSIRSTSASLGGGKLIGDLQWRRSDLATWNSVALTDAQLEQQIVVNKGLNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0193733_109559123300020022SoilTGMTFTINSVNGVLRTTTVSIRSISANLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLNWTTDAPATYSGTYQITLSQTVP
Ga0193733_114790313300020022SoilAPAAADYINGYVDATGVTFQLAATAGASRTATVLIRATSASLGGGKVLGDLEWRRSDLAIWNPITTTDVQVEQRVMVKNGANDPWSNTIFFRMLLSWTTDAPATYSANYVITLSQTP
Ga0193745_100537713300020059SoilSANLGGGKVIADLQWRRSDLATWNSITLTDAQIEQRIVINKALNDPWSNTIFFRMVLNWTADAPATYSGTYQITLSQTVP
Ga0210382_1025974623300021080Groundwater SedimentNGTVIFPAPTATDYINGFVDAATGVTFTINSLNGVPRTTTVSIRSTSASLGGGKVIGDLQWRRSDLATWNSVALTDAQVEQQIVVNKGLNDPWSNTIFFRMILNWTTDAPATYSGNYQITLSQTVP
Ga0210382_1027428823300021080Groundwater SedimentSGATIAFAAPTAADYVAGFINSASGVTFTVNAQTGTARTTTISIKATSASLGGSKVIGDLQWRRSDLAMWNSITLTDAQVEQQIVVKGGSNDPWSNTIFFRMLLDWTKDTPGTYSGNYQITLSQTVP
Ga0193719_1005212613300021344SoilIAGFIGASNGATFTINSVNGVPRTTTISIRSTSASLGGSKVIGDLEWRRSDLATWNSITLTDTQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0193699_1014364213300021363SoilTVAFPAPTATDYIAGYIDASTGATFTINSLNGVPRTTTISIRSTSASLGGSKVIGDLQWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWGNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0193699_1047195613300021363SoilTTLTLTNAAITFPAPTATDYVNGYVDALTGVAFNLDATAGASRTSTVLIRATSASLGSGKLLGDLKWRRSDLVPWNAITSTDVQVEQRVMVKNGANDPWGNTIFFRMLLNWTTDAPATYTANYVITVSQTP
Ga0193737_100142613300021972SoilTINAQTGASRTTTILIRSTSASLGGGKAIGELQWRRSDLAVWNSITLTDAQVEQRVQVRNGLDDPWSNTIFFRMLLNWTTDPPATYTGNYVITLAQTVP
Ga0233356_103387823300023046SoilGVTFTLNASAGGSRTTTVLIRASSASLGGGKILGDLQWRRSDLVNWSAITSTDVQVEQRVMAKAGANDPWSNTIFFRMLLDWTKDAPATYTANYVITLSQTP
Ga0193714_103862313300023058SoilAASLGGSKVIGDLQWRRSDLANWNSITLADAQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0247670_107717123300024283SoilANLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRTVINKVLNDPWSNTIFFRMLLNWTTDPPATYSGTYQITLSQTVP
Ga0208079_102744923300025481Arctic Peat SoilTISIRSTSANLGGGKIIGDLQWRRSDLATWNSISLTDTQVEQRVMVRNGLNDPWSNTIFFRMVLTWATDAPATYSANYQITLSQTVP
Ga0207657_1044745323300025919Corn RhizosphereNGLTRTTTISIRSTSGSMGGGKVIGDLEWRRSDLATWNTMTLSDAQVEQRLVVNKGLNDPWSNTIFFRLKLNWTTDAPGTYTANYEITLAQTVP
Ga0207649_1016029723300025920Corn RhizosphereGVTFTINSQNGLTRTTTISIRSTSGSMGGGKVIGDLEWRRSDLATWNTMTLSDAQVEQRLVVNKGLNDPWSNTIFFRLKLNWTTDAPGTYTANYEITLAQTVP
Ga0207652_1094304713300025921Corn RhizosphereFPAPTAADYIAGFVNSTGGATFTINSVNGLQRTTTISIRSTSANLGNGKVIGDLQWRRSDLATWNSITLSDAQVEQRIVINKGLNDPWSNTIFFRMVLDWTTDAPATYSANYQITLSQTV
Ga0207701_1060535923300025930Corn, Switchgrass And Miscanthus RhizosphereTTGVTFTVDAASGNQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP
Ga0207704_1081770323300025938Miscanthus RhizosphereMPAPTAADFVNGFVNSTTGVTFTLDASSGNQSHTTTVLIRSTSANLGNGKIIGDLQWRRSDLTTWNSITLTDAQVEQRVQVRNGLNDPWSNTIYFRMILDWTTDPPATYTANYQITLAQTVP
Ga0207661_1018150423300025944Corn RhizosphereSRTTTISIRTTSANLGSGKVIGDLQWRRSDLATWNSISLTDAQVEQRIVVAKGLNDPWSNTIFFRMILNWATDAPATYSGSYTITLSQTVP
Ga0207679_1161652023300025945Corn RhizosphereFAINATNGGSRTTTISIRTTSANLGSGKVIGDLQWRRSDLATWNSISLTDAQVEQRIVVAKGLNDPWSNTIFFRMILNWATDAPATYSGSYTITLSQTVP
Ga0207667_1114518323300025949Corn RhizosphereINGYVNSTTGVLYTVNSINGINRTTTISIRTTSANLGGTKSIADLMWRRSDLATWTSISLTDAQVEQKPVINKVLNDPWSNTIFFRMNLNWATDAPATYSANYTITLSQTVP
Ga0207651_1115107213300025960Switchgrass RhizosphereDATNGGSRTTTISIRTTSPNLGGSKVIGDLQWRRSDLATWSSISLTDAQVEQRIVVSKGLNDPWSNTIFFRMILNWATDAPGTYSGSYTITLSQTVP
Ga0207677_1212981013300026023Miscanthus RhizosphereTGGVTFTVNAQTGVTRTTTILIRSTSANLGNGKVIGDLQWRRSDLATWNDITLTDAQVEQRTVIRNILNDPWSNTIFFRLKLAWTSDAPGTYSANYQITLSQTP
Ga0207702_1057009323300026078Corn RhizosphereSLSANLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRTVINKVLNDPWSNTIFFRMLLNWTTDPPATYSGTYQITLSQTVP
Ga0207683_1063150023300026121Miscanthus RhizosphereFTINSTNGVPRTTTVSIRSTSASLGNGKVLGDLQWRRSDLATWSSITQTNAQVEQRIVINKGLNDPWSNTVFFRMLLNWTSDAPATYTANYQITLSQTVP
Ga0209881_107802323300026273SoilLAGGTITFAAPTAADYIAGFINSGTGVTFTLNAQTGASRTTTISIRSISASLGSGKVIGDLQWRRSDLATWNSITLTDAQVEQRVQVRSGLNDPWSNTIFFRMVLTWATDAPATYSANYQITLSQTVP
Ga0209438_116592613300026285Grasslands SoilSIRATSASLGNGKLIGDLQWRRSDLATWNDVTLTDAQVEQRIVVNKGLNDPWSNTIFFRMALSWTSDAPATYSANYVITLSQTVP
Ga0209267_123786523300026331SoilTTVSIRSTSANLGGGKVIGDLRWRRSDLATWNSITLTDAQVEQRIVVRNGSNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0209378_115235613300026528SoilIRSTSANLGGGKVIGDLRWRRSDLATWNSITLTDAQVEQRIVVRNGSNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0209056_1037729713300026538SoilTAADYIAGFINSAAGATFTVDATSGTSRTTTVSIRSTSANLGGGKVIGDLRWRRSDLATWNSITLTDAQVEQRIVVRNGSNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0209056_1069347123300026538SoilDYIAGWVNSTTGVSFNVNATSGASRTTTVSIRSTSASLGGGKVIGDLQWRRSDLTGWNSIALTDAQVEQRIVIKNALNDPWSNTIFFRMVLNWTTDAPGTYSANYQITLSQTVP
Ga0209805_138721813300026542SoilTFPAPTAADYIAGFVNSTTGVTFTIDAQTGASRTTTVSIRSTSADLGSGKVIGDLQWRRSDLATWNSIGLTDAQVEQRVVIRNVVNDPWNNTIFFRLVLNWTTDAPATYTANYQVTLSQTVP
Ga0209996_105461713300027395Arabidopsis Thaliana RhizosphereGIDAVESSVSYALQANVENLTLTGGTIAFVPPTATDYDAGYLDSPSGVTFTVNAQTGAATRTTTISIRSTSASLGSGKAIGELQWRRSDLAVWNSITLTDTQVEQRVQIRNGLNDPWSNTIFFRMLLDWTTDPPATYAGNYVITLSQTVP
Ga0209220_109815223300027587Forest SoilATSNSGQANVTTIAIKSTSANLGNGKILADLQWRRSDLATWNTITLANVNVETRSQTFNGANDPWSNTIFFRMKLTWTTDAPATYTANYTITLSVQ
Ga0209217_112841423300027651Forest SoilFTVNATSDAGQAMMTTVAIKSTSANLGNGKLLADLQWRRSDLATWNAMTLANVNVEARSQTFNGLNDPWSNTIFFRMKLSWTTDAPAMYTANYTITLSVQ
Ga0209485_104128223300027691Agricultural SoilFPAPTANDYVAGFVNSTSGVTFTADATNGNQSHTTAILIRATSASLGGGKVIGDLQWRRSDLTTWTSISLTDVQVEQRVQVRNGLNDPWSNTIFFRLLLDWTTDAPATYSANYEITLAQTVP
Ga0209074_1017485023300027787Agricultural SoilLTLGGAAVTFPAPNATDYINGYVYSTTGVTYTVSGTNGNQSHTTTISIRATSANLGGSKALGDLEWRRSDLAGWSAITSTDAQVEQKVMIRGQLNDPWSNTIFFRMKLSWTADPPATYSANYQITLSQTVP
Ga0209486_1090547023300027886Agricultural SoilVVFPAPTANDYAAGFVNSTAGVTFNINATQGNQAHTTTVLIRSLSANLGGTKPIGHLQWRRSDLAVWNDLTVANVQVEQRPQTLNVLNDPWGNTIFFRMLLNWTTDPPATYSANYQLTLSQTVP
Ga0209526_1099278913300028047Forest SoilGQANTTTVAIKSTSANLGNGKALADLQWRRSDLATWNSITLANVNVESRLQTFNGANDPWSNTIFFRMKLAWTTDAPAAYTANYTITLTVTQ
Ga0268264_1265314513300028381Switchgrass RhizosphereQSHTTTVLIRSTSANLGNGKVIGDLQWRRSDLAIWNNITLSDAQVEQRVQVRNGLNDPWSNTIYFRMVLNWTSDAPATYSANYQVTLSQTVP
Ga0307293_1003857623300028711SoilAADYIAGFVDASTGATFTINSLNGLARTTTISIRSTSASLGGSKVIGDLQWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0307299_1006185623300028793SoilGGTVAFPAPTAADYIAGFIDASTGATCTINSLNGVPRTTTISIRSTSASLGTGKVIGDLQWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0307305_1048033723300028807SoilVAFPTPTAADYIAGYIDASTGATFTINSLNGVPRTTTISIRSTSASLGTGKVIGDLQWRRSDLATWNSITLTDAQVEQRIVVNKGLNDPWSNTIFFRMLLSWTSDGPATYSANYQITLSQTVP
Ga0307292_1006343623300028811SoilLSVTGGTIAFPAPTAADYIAGFLDASTGATFTINSLNGLARTTTISIRSTSASLGGSKVIGDLEWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWGNTIFFRMLLNWTSDGPATYSANYQITLSQTVP
Ga0307296_1009442323300028819SoilSLSVTGGTVAFPAPTAADYIAGYIDASTGATFTINSLNGVPRTTTISIRSTSASLGTGKVIGDLQWRRSDLATWNSITLTDTQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDAPATYSANYQITLSQTVP
Ga0307310_1001082733300028824SoilVAFPVPTAADYIAGFVDASTGATFTINSLNGLARTTTISIRSTSASLGGSKVIGDLEWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWGNTIFFRMLLNWTSDGPATYSANYQITLSQTVP
Ga0307312_1014623123300028828SoilLTNGTVTFPAPTATDYINGFVDAATGVTFTINSLNGVPRTTTVSIRSTSASLGGGKLIGDLQWRRSDLATWNSVALTDAQLEQQIVVNKGLNDPWSNTIFFRMILNWTTDAPGTYSANYQITLSQTVP
Ga0307312_1047316423300028828SoilTTISIRSISANLGGGKAIADLEWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWSNTIFFRMVLHWTTDPPATYSGTYEITLSQTVP
Ga0307277_1003492213300028881SoilNSLNGLARTTTISIRSTSASLGGSKVIGDLQWRRSDLATWNSITLTDAQVEQRIVINKGLNDPWGNTIFFRMLLNWTSDGPATYSANYQITLSQTVP
Ga0307308_1062172613300028884SoilASTGATFTINSLNGVPRTTTISIRSTSASLGTGKVIGDLQWRRSDLATWNSITLTDTQVEQRIVINKGLNDPWSNTIFFRMLLSWTSDAPATYSANYQITLSQTVP
Ga0307304_1002720313300028885SoilSTSASLGGGKLIGDLRWRRSDLATWNSVALTDAQLEQQIVVNKGLNDPWSNTIFFRMVLTWTTDAPATYSGTYQITLSQTVP
Ga0372943_0127045_1203_15263300034268SoilNSSGGVTFTVNAQNGTSRTTTILLRSTSASLGNGKIIGDLQWRRSDLATWNDITLTDAQVEQRVVVRNALNDPWNNTIFFRMKLSWTSDAPATYAANYQITLAQTVP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.