Metagenome / Metatranscriptome Family F047460

Basic Information
Family ID	F047460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	46 residues
Representative Sequence	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLR
Number of Associated Samples	101
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.46 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	99.33 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Unclassified (93.289 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (36.913 % of family members)
Environment Ontology (ENVO)	Unclassified (77.181 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (75.839 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.29 %
All Organisms	root	All Organisms	6.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.29 %
Viruses	superkingdom	All Organisms → Viruses	6.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.71 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001976\|JGI24752J21851_1056611	Not Available	537	Open in IMG/M
3300005330\|Ga0070690_100227559	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M
3300005330\|Ga0070690_100984850	Not Available	663	Open in IMG/M
3300005335\|Ga0070666_11083020	Not Available	595	Open in IMG/M
3300005347\|Ga0070668_101933438	Not Available	543	Open in IMG/M
3300005347\|Ga0070668_102280223	Not Available	500	Open in IMG/M
3300005353\|Ga0070669_101438512	Not Available	598	Open in IMG/M
3300005355\|Ga0070671_101361734	Not Available	626	Open in IMG/M
3300005355\|Ga0070671_101515499	Not Available	593	Open in IMG/M
3300005367\|Ga0070667_102143318	Not Available	527	Open in IMG/M
3300005406\|Ga0070703_10209579	Not Available	770	Open in IMG/M
3300005445\|Ga0070708_102063004	Not Available	527	Open in IMG/M
3300005617\|Ga0068859_102166622	Not Available	613	Open in IMG/M
3300005841\|Ga0068863_102666959	Not Available	508	Open in IMG/M
3300005842\|Ga0068858_102022779	Not Available	569	Open in IMG/M
3300005842\|Ga0068858_102213331	Not Available	543	Open in IMG/M
3300005842\|Ga0068858_102544217	Not Available	505	Open in IMG/M
3300005843\|Ga0068860_100937788	Not Available	882	Open in IMG/M
3300005843\|Ga0068860_101996454	Not Available	602	Open in IMG/M
3300005843\|Ga0068860_102779401	Not Available	507	Open in IMG/M
3300009092\|Ga0105250_10366662	Not Available	633	Open in IMG/M
3300009972\|Ga0105137_109441	Not Available	529	Open in IMG/M
3300009973\|Ga0105136_103977	Not Available	784	Open in IMG/M
3300009976\|Ga0105128_111008	Not Available	628	Open in IMG/M
3300009980\|Ga0105135_111443	Not Available	690	Open in IMG/M
3300009988\|Ga0105035_122541	Not Available	602	Open in IMG/M
3300009989\|Ga0105131_121866	Not Available	638	Open in IMG/M
3300009990\|Ga0105132_110674	Not Available	777	Open in IMG/M
3300009994\|Ga0105126_1056226	Not Available	505	Open in IMG/M
3300009995\|Ga0105139_1012164	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300009995\|Ga0105139_1031513	Not Available	858	Open in IMG/M
3300009995\|Ga0105139_1088955	Not Available	588	Open in IMG/M
3300009995\|Ga0105139_1119045	Not Available	512	Open in IMG/M
3300009995\|Ga0105139_1123654	Not Available	502	Open in IMG/M
3300010373\|Ga0134128_12328385	Not Available	590	Open in IMG/M
3300010396\|Ga0134126_11664018	Not Available	701	Open in IMG/M
3300010396\|Ga0134126_12766689	Not Available	532	Open in IMG/M
3300010401\|Ga0134121_11752622	Not Available	646	Open in IMG/M
3300014325\|Ga0163163_13118651	Not Available	517	Open in IMG/M
3300014968\|Ga0157379_11764684	Not Available	607	Open in IMG/M
3300014968\|Ga0157379_12315225	Not Available	535	Open in IMG/M
3300015278\|Ga0182099_1026778	Not Available	667	Open in IMG/M
3300015297\|Ga0182104_1095328	Not Available	549	Open in IMG/M
3300015297\|Ga0182104_1112823	Not Available	515	Open in IMG/M
3300015306\|Ga0182180_1093846	Not Available	505	Open in IMG/M
3300015311\|Ga0182182_1038313	Not Available	752	Open in IMG/M
3300015311\|Ga0182182_1042035	Not Available	730	Open in IMG/M
3300015312\|Ga0182168_1136241	Not Available	503	Open in IMG/M
3300015313\|Ga0182164_1063770	Not Available	673	Open in IMG/M
3300015317\|Ga0182136_1135603	Not Available	511	Open in IMG/M
3300015318\|Ga0182181_1109075	Not Available	514	Open in IMG/M
3300015324\|Ga0182134_1146943	Not Available	504	Open in IMG/M
3300015325\|Ga0182148_1079057	Not Available	635	Open in IMG/M
3300015326\|Ga0182166_1048182	Not Available	751	Open in IMG/M
3300015326\|Ga0182166_1059579	Not Available	699	Open in IMG/M
3300015326\|Ga0182166_1074298	Not Available	648	Open in IMG/M
3300015326\|Ga0182166_1134541	Not Available	518	Open in IMG/M
3300015327\|Ga0182114_1162942	Not Available	500	Open in IMG/M
3300015328\|Ga0182153_1154218	Not Available	501	Open in IMG/M
3300015329\|Ga0182135_1102666	Not Available	593	Open in IMG/M
3300015329\|Ga0182135_1127603	Not Available	544	Open in IMG/M
3300015330\|Ga0182152_1066192	Not Available	700	Open in IMG/M
3300015330\|Ga0182152_1130599	Not Available	539	Open in IMG/M
3300015333\|Ga0182147_1089935	Not Available	652	Open in IMG/M
3300015333\|Ga0182147_1116613	Not Available	588	Open in IMG/M
3300015333\|Ga0182147_1121993	Not Available	577	Open in IMG/M
3300015333\|Ga0182147_1134948	Not Available	554	Open in IMG/M
3300015335\|Ga0182116_1108156	Not Available	627	Open in IMG/M
3300015335\|Ga0182116_1161732	Not Available	528	Open in IMG/M
3300015335\|Ga0182116_1173569	Not Available	509	Open in IMG/M
3300015336\|Ga0182150_1158522	Not Available	513	Open in IMG/M
3300015338\|Ga0182137_1132592	Not Available	574	Open in IMG/M
3300015339\|Ga0182149_1058485	Not Available	776	Open in IMG/M
3300015339\|Ga0182149_1087827	Not Available	667	Open in IMG/M
3300015340\|Ga0182133_1094392	Not Available	680	Open in IMG/M
3300015340\|Ga0182133_1103906	Not Available	655	Open in IMG/M
3300015340\|Ga0182133_1137350	Not Available	582	Open in IMG/M
3300015348\|Ga0182115_1288366	Not Available	519	Open in IMG/M
3300015350\|Ga0182163_1133793	Not Available	766	Open in IMG/M
3300015352\|Ga0182169_1316571	Not Available	500	Open in IMG/M
3300015353\|Ga0182179_1149832	Not Available	727	Open in IMG/M
3300015354\|Ga0182167_1095697	All Organisms → Viruses → Predicted Viral	1082	Open in IMG/M
3300015354\|Ga0182167_1365188	Not Available	502	Open in IMG/M
3300017414\|Ga0182195_1159332	Not Available	576	Open in IMG/M
3300017421\|Ga0182213_1152580	Not Available	651	Open in IMG/M
3300017421\|Ga0182213_1152580	Not Available	651	Open in IMG/M
3300017421\|Ga0182213_1247510	Not Available	511	Open in IMG/M
3300017440\|Ga0182214_1100718	Not Available	615	Open in IMG/M
3300017693\|Ga0182216_1143829	Not Available	601	Open in IMG/M
3300017694\|Ga0182211_1166728	Not Available	526	Open in IMG/M
3300020023\|Ga0182178_1006928	Not Available	754	Open in IMG/M
3300020023\|Ga0182178_1008359	Not Available	708	Open in IMG/M
3300020023\|Ga0182178_1015581	Not Available	575	Open in IMG/M
3300020033\|Ga0182146_103835	Not Available	598	Open in IMG/M
3300025936\|Ga0207670_10296658	Not Available	1264	Open in IMG/M
3300025972\|Ga0207668_10366602	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300025972\|Ga0207668_11806646	Not Available	551	Open in IMG/M
3300026035\|Ga0207703_12335178	Not Available	510	Open in IMG/M
3300026088\|Ga0207641_10908421	Not Available	874	Open in IMG/M
3300026118\|Ga0207675_102320371	Not Available	550	Open in IMG/M
3300026740\|Ga0207439_101944	Not Available	681	Open in IMG/M
3300028049\|Ga0268322_1001861	All Organisms → Viruses → Predicted Viral	1342	Open in IMG/M
3300028049\|Ga0268322_1002435	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300028049\|Ga0268322_1015520	Not Available	764	Open in IMG/M
3300028049\|Ga0268322_1051185	Not Available	521	Open in IMG/M
3300028049\|Ga0268322_1051486	Not Available	520	Open in IMG/M
3300028050\|Ga0268328_1003137	Not Available	1344	Open in IMG/M
3300028050\|Ga0268328_1063998	Not Available	525	Open in IMG/M
3300028051\|Ga0268344_1009420	Not Available	686	Open in IMG/M
3300028053\|Ga0268346_1033098	Not Available	554	Open in IMG/M
3300028055\|Ga0268338_1002151	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300028057\|Ga0268352_1036530	Not Available	545	Open in IMG/M
3300028058\|Ga0268332_1011148	Not Available	961	Open in IMG/M
3300028061\|Ga0268314_1016289	Not Available	764	Open in IMG/M
3300028061\|Ga0268314_1029316	Not Available	628	Open in IMG/M
3300028064\|Ga0268340_1054180	Not Available	599	Open in IMG/M
3300028139\|Ga0268355_1011639	Not Available	587	Open in IMG/M
3300028142\|Ga0268347_1001674	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300028142\|Ga0268347_1006500	Not Available	830	Open in IMG/M
3300028143\|Ga0268348_1012721	Not Available	629	Open in IMG/M
3300028148\|Ga0268354_1023031	Not Available	510	Open in IMG/M
3300028148\|Ga0268354_1023652	Not Available	503	Open in IMG/M
3300028149\|Ga0268353_108381	Not Available	731	Open in IMG/M
3300028150\|Ga0268343_1006615	Not Available	729	Open in IMG/M
3300028151\|Ga0268308_1002843	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300028153\|Ga0268320_1030155	Not Available	503	Open in IMG/M
3300028154\|Ga0268341_1001050	Not Available	1394	Open in IMG/M
3300028157\|Ga0268318_100604	Not Available	763	Open in IMG/M
3300028248\|Ga0268312_1003947	Not Available	982	Open in IMG/M
3300028251\|Ga0268324_1007395	Not Available	735	Open in IMG/M
3300028463\|Ga0268325_102208	Not Available	655	Open in IMG/M
3300028463\|Ga0268325_103754	Not Available	534	Open in IMG/M
3300028468\|Ga0268317_1000798	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300028468\|Ga0268317_1002822	Not Available	785	Open in IMG/M
3300028469\|Ga0268337_1005289	Not Available	738	Open in IMG/M
3300028471\|Ga0268323_1009919	Not Available	638	Open in IMG/M
3300028472\|Ga0268315_1007817	Not Available	739	Open in IMG/M
3300028473\|Ga0268319_1010154	Not Available	657	Open in IMG/M
3300028475\|Ga0268327_1000714	Not Available	1361	Open in IMG/M
3300028475\|Ga0268327_1021981	Not Available	539	Open in IMG/M
3300028476\|Ga0268329_1023910	Not Available	538	Open in IMG/M
3300028476\|Ga0268329_1029638	Not Available	503	Open in IMG/M
3300028523\|Ga0268313_1012267	Not Available	585	Open in IMG/M
3300028526\|Ga0268339_1008775	Not Available	646	Open in IMG/M
3300028526\|Ga0268339_1019179	Not Available	518	Open in IMG/M
3300028527\|Ga0268335_1003934	Not Available	791	Open in IMG/M
3300028527\|Ga0268335_1011159	Not Available	588	Open in IMG/M
3300032465\|Ga0214493_1156411	Not Available	526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	93.29%
Environmental	Environmental	6.71%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	93.29%
Terrestrial	Environmental → Terrestrial	6.71%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	67.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.05%
Unclassified	Host-Associated → Plants → Unclassified	8.05%
Soil	Environmental → Terrestrial → Soil	6.71%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	67.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.05%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified	8.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.36%
Loam	Environmental → Terrestrial → Soil → Loam	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	67.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.05%
Unclassified	Host-Associated → Plants → Unclassified → Unclassified → Unclassified	8.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	36.91%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	30.87%
Switchgrass Associated	Host-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated	8.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.04%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009972	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaG	Host-Associated	Open in IMG/M
3300009973	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_222 metaG	Host-Associated	Open in IMG/M
3300009976	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaG	Host-Associated	Open in IMG/M
3300009980	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaG	Host-Associated	Open in IMG/M
3300009988	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG	Host-Associated	Open in IMG/M
3300009989	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaG	Host-Associated	Open in IMG/M
3300009990	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaG	Host-Associated	Open in IMG/M
3300009994	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaG	Host-Associated	Open in IMG/M
3300009995	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015278	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015297	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015306	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015311	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015312	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015317	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015318	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015324	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015325	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015326	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015327	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015328	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015329	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015330	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015333	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015335	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015336	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015339	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015348	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015350	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015353	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015354	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017414	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017421	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017422	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017440	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017693	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300020023	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MG	Host-Associated	Open in IMG/M
3300020033	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12JUL2016_LD2 MG	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026740	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-12 (SPAdes)	Environmental	Open in IMG/M
3300028049	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028050	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028051	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028053	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028055	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028057	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028061	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028064	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028139	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028142	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028143	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028148	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028149	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_18SEP2017_LD1	Host-Associated	Open in IMG/M
3300028150	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028151	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028153	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028154	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1	Host-Associated	Open in IMG/M
3300028157	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028248	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028251	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028463	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028468	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028469	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028471	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028472	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028473	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1	Host-Associated	Open in IMG/M
3300028475	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028476	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028523	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1	Host-Associated	Open in IMG/M
3300028526	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028527	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300032465	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24752J21851_10566111	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MFLLHFVMFECIYDHFVTALNSAQMGQSGAINAKVRATK
Ga0070690_1002275591	3300005330	Switchgrass Rhizosphere	MFLLHFVMFGCIYYRFVATLNLVQMGQFGAINAKVRITKSRLNLSLRTRPIHTIGP*
Ga0070690_1009848501	3300005330	Switchgrass Rhizosphere	MFGCIYDCFVTALNSVQMGQSGAINAKVRATKSRLNLSLRTCPIHTIGP*
Ga0070666_110830201	3300005335	Switchgrass Rhizosphere	MYLLHFVMFECIYDCFVTALNSVQMGHSGAINGKVRATKSRLNLSLRTHPI
Ga0070668_1019334381	3300005347	Switchgrass Rhizosphere	MLHFVMFECISDRFVSALNSMQMGQSGATNAKDCVTKSRQNLSLRTCPIHTIGP*
Ga0070668_1022802231	3300005347	Switchgrass Rhizosphere	MFLLHFIMFGCIYDHFVTALNSVQMGQSGATNAKVHVTKSRLNLSLRTCPI
Ga0070669_1014385121	3300005353	Switchgrass Rhizosphere	IWDHFVTALNSMQMGQSITINAKVRVKKSHSNLSLRTRLIHTIGP*
Ga0070671_1013617341	3300005355	Switchgrass Rhizosphere	DPKLMFLLHFVMFECIYDHFVTALNSAQMGQSGAINAKVRATKSRLNFSLRTRPIHTIGP
Ga0070671_1015154991	3300005355	Switchgrass Rhizosphere	DPKLMFLLHFVMFECIYDHFVTALNSAQMGQSGAINAKVHATKSRLNFSL*
Ga0070667_1021433181	3300005367	Switchgrass Rhizosphere	CIWDRFVTALNSMQMGQSIAINAKVRVKKSRLNLSLRTRLIHKIGP*
Ga0070703_102095791	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MFLLHFVMFGCIYDCFVTALNSVQMGQSGAINVKVRATKS
Ga0070708_1020630042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLHFVMFGCIWDRFVTALNSMQLDQSGAINVKVRATKLRLNLSQRMRPIHTIGP*
Ga0068859_1021666221	3300005617	Switchgrass Rhizosphere	MFWGIWERFVTALNSMQMGQSGAINAKVRVTKSRLNLSPRTRP
Ga0068863_1026669591	3300005841	Switchgrass Rhizosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATKSRLNLSLRT
Ga0068858_1020227792	3300005842	Switchgrass Rhizosphere	MFECIYDHFVTALNSAQMGQSGAINAKVRATKSRLNFSLRT
Ga0068858_1022133311	3300005842	Switchgrass Rhizosphere	FGCIWERFVTALNSMQMGQSGAINAKVRVTMSRLNLSLQTRPIHTIGP*
Ga0068858_1025442171	3300005842	Switchgrass Rhizosphere	FGCIWDRFVTALNSMQMGQSIAINAKVRVTKSRLNLSLRTRPIHTIGP*
Ga0068860_1009377881	3300005843	Switchgrass Rhizosphere	VFLLHFVTFGCIYDHFVTAPNLVQMGHSGAINAKFRATKSRLNLSLR
Ga0068860_1019964541	3300005843	Switchgrass Rhizosphere	TNAREPHHGTLNHVLLHFVMFGCIWERFITALNSMQMGQSSPINAKVRVTKSRLNLSLRTCPIHTIGP*
Ga0068860_1027794011	3300005843	Switchgrass Rhizosphere	MFLLHFVMFGCLYYHFVATLNSVQMGQSGAINAKVRATKSHM
Ga0105250_103666621	3300009092	Switchgrass Rhizosphere	MYLLHFVMFECIYDCFVTALNSVQMGHSGAINGKVRATKSRLNLSLRTHPLNTVG
Ga0105137_1094411	3300009972	Switchgrass Associated	MFGCIWDRFITALNSVKMSQSVAINAKVRATKSPLNMSLRT
Ga0105136_1039771	3300009973	Switchgrass Associated	MFLLHFVMFGCIYDRFVTTLNSVQMGQSGAINAKVHATKSRRNFSLRTHPIHTMGP
Ga0105128_1110081	3300009976	Switchgrass Associated	MFLLHFVMFGCIYDHFVTTLNSVQMGQSGAINAKVRATKLHLNLSL
Ga0105135_1114431	3300009980	Switchgrass Associated	MFLLHFVMFVCIYDHFVTTLNSVQMGQSGAINAKVRATKLHLNL
Ga0105035_1225411	3300009988	Switchgrass Rhizosphere	LMFLLHFVMFGCIYDCFVTALNSVQMGQSGAINAKVRATKSRRDFLQ*
Ga0105131_1218661	3300009989	Switchgrass Associated	MFGCIYDYFVATLNSVQMGQSGEINAKVRATKSHMN
Ga0105132_1106741	3300009990	Switchgrass Associated	FGCIYDRFVTALNTVQMGQSGAINAKVCVTKSRLNFSL*
Ga0105126_10562261	3300009994	Switchgrass Associated	MFLLHFLMFECIYDHFVTALNSTQMGQSGAINAKVRATKSRLNFSLRTRPIH
Ga0105139_10121641	3300009995	Switchgrass Associated	MFGCIWDRFVTALNSMEMGQSIAINAKVRVTKSRLNLSLRTRPIHTIGP
Ga0105139_10315131	3300009995	Switchgrass Associated	MFGCIWDRFVTALNSVQMGQSGAINAKVRVTMSRL
Ga0105139_10889551	3300009995	Switchgrass Associated	MFGCIYDYFVATLNSVQMGQSGEINAKVRATKSHMNLSLRMRPIHTIGPK
Ga0105139_11190451	3300009995	Switchgrass Associated	MFLLHFVMFGCIDGRFVTALNSVQMGQSGAINAKVRATKSRLNLSL
Ga0105139_11236541	3300009995	Switchgrass Associated	MFLLHLVMFGCIYDRFVTALNSVQMGQSGSTNAKVRATKLHLNLSLRTRPIH
Ga0134128_123283851	3300010373	Terrestrial Soil	MFGCIWDRFVTAPNSVQMGQSGAINAKVRVTKSRLNL
Ga0134126_116640181	3300010396	Terrestrial Soil	MFLLHFVIFGCIYDRFVTALNSVQMGQFGAINAKVRATKSHLNLSLRTRPIHTIG
Ga0134126_127666891	3300010396	Terrestrial Soil	MFLLHFVMFGCIYDCFVTALNSVQMGQSGAINAKVRATKSRL
Ga0134121_117526222	3300010401	Terrestrial Soil	TMGPKTHVLLHFVMFGCIWDRFVTALNSMQLDQSGAINVKVRATKLRLNLSQRMRPIHTIGP*
Ga0163163_131186511	3300014325	Switchgrass Rhizosphere	MFFLHFVMFGCIYDRFVTTLNSVQMGQSGAINAKVR
Ga0157379_117646841	3300014968	Switchgrass Rhizosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQFGAINAKVRATK
Ga0157379_123152251	3300014968	Switchgrass Rhizosphere	MYLLHFVMFECIYDCFVTALNSVQMGHSGAINGKVRATKSRLNLSLRTHPINTVGPKT
Ga0182099_10267781	3300015278	Switchgrass Phyllosphere	MFGCIYYRFVATLNSVQMGQSGAINAKVRATKSHMNLSLRMRPIHTI
Ga0182104_10953281	3300015297	Switchgrass Phyllosphere	MFGCIYDRFVTTLNSVQMDQSGAINVKVRATKSHLNWSLQTRPIHTIGPKHM
Ga0182104_11128231	3300015297	Switchgrass Phyllosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRTRPIHTIGPQTHVLVCFI
Ga0182180_10938461	3300015306	Switchgrass Phyllosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRTRPIHTIGPQTH
Ga0182182_10383132	3300015311	Switchgrass Phyllosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRTRPIH
Ga0182182_10420351	3300015311	Switchgrass Phyllosphere	MFLLHFVMFGCLYYRFVATLNSVQMGQSGAINAKVRATKSHMNLSL
Ga0182168_11362411	3300015312	Switchgrass Phyllosphere	MFECIYDHFVTALNSAQMGQSGAINAKVRATKSRL
Ga0182164_10637701	3300015313	Switchgrass Phyllosphere	MFLLHFVMFGCIYDHFVTALNSAQMGQSGAINAKVRAT
Ga0182136_11356031	3300015317	Switchgrass Phyllosphere	MFGCIYDRFVTTLNSVQMDQSGAINVKVRATKSHLNWSL
Ga0182181_11090751	3300015318	Switchgrass Phyllosphere	VFLLHYVMFGCIYDRFVTTLNSVQMDQSGAINVKVRATKSHLNWSLQT
Ga0182134_11469431	3300015324	Switchgrass Phyllosphere	MFLLHFVMFGCIYYRFIATLNSVQMGQSGAINAKVCAT
Ga0182148_10790571	3300015325	Switchgrass Phyllosphere	MFGCIWERFVTALNSMQMGQSGAINAKVRVTMSRLN
Ga0182166_10481821	3300015326	Switchgrass Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNS
Ga0182166_10595791	3300015326	Switchgrass Phyllosphere	TLWDPKLMFLLHFVMFGCIYDCFVTALNSVQMGPFGAINAKVRATKSRLNL*
Ga0182166_10742981	3300015326	Switchgrass Phyllosphere	MFGSIWDRFATALNSVQMGQSGAINAKVRATKSRLNLSLRTHPIHT
Ga0182166_11345411	3300015326	Switchgrass Phyllosphere	MFGSIWDRFPTALNSVQMGQSGAINAKVRATKSRL
Ga0182114_11629421	3300015327	Switchgrass Phyllosphere	MFLLHFVMFGCIYDSFVTALNSVQMGQSGAINVKV
Ga0182153_11542181	3300015328	Switchgrass Phyllosphere	MFLLHFVMFGCIYDHYVTALNSAQMGQSGAINAKVRATKSRLNFSLRTRPIH
Ga0182135_11026661	3300015329	Switchgrass Phyllosphere	MVLLHFVMFGCIYYHFVATLNLVQMGQFGAINAKVRITKSRLNLSLRTR
Ga0182135_11276031	3300015329	Switchgrass Phyllosphere	MFLLHFVMFGCIWDRFVTALNSMQMGQSIAINAKVRVTKSHLNLSLQTC
Ga0182152_10661921	3300015330	Switchgrass Phyllosphere	MFLLHFVMFGCIYDHFVTALNSAQMGQSGAINAKVRATKSR
Ga0182152_11305991	3300015330	Switchgrass Phyllosphere	MFLLHFVMFECIYDHFVTALNSAQMGQSGAINAKVRATKSRLNFSLRTR
Ga0182147_10899351	3300015333	Switchgrass Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNSRLNLSLR
Ga0182147_11166131	3300015333	Switchgrass Phyllosphere	MQNFMFWCIWDHFVCALNSMQMGQSGAINAKDRAANSR
Ga0182147_11219931	3300015333	Switchgrass Phyllosphere	MFLLHFVIFGCIYDCFVTALNSVQMGQSGAINAKVRATKS
Ga0182147_11349481	3300015333	Switchgrass Phyllosphere	MFLLHFIMFGCIYDHFVTALNSVQMGQSGATNAKVHVTKSRLNLSLR
Ga0182116_11081561	3300015335	Switchgrass Phyllosphere	MFGCIWDHFIAALDSVKMSQSVAINAKVRATKSRLNL
Ga0182116_11617321	3300015335	Switchgrass Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNSRLNLSLRTRPIH
Ga0182116_11735691	3300015335	Switchgrass Phyllosphere	MFLLHFVMFGCIYYRFVATLNLVQMGQFGAINAKVRIT
Ga0182150_11585221	3300015336	Switchgrass Phyllosphere	MFLFHFVMFRCIYDYFVTALNSVQMGQSGAINAKVRATKSRLNL
Ga0182137_11325921	3300015338	Switchgrass Phyllosphere	MFGSIWDRFATALNSVQMGQSGAIKAKVRATKSRLNLSLRKRPIHTIEP*
Ga0182149_10584851	3300015339	Switchgrass Phyllosphere	MFLLHFVTFGCIYDHFVTALNLVQMDHSGAINAKVRA
Ga0182149_10878271	3300015339	Switchgrass Phyllosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQFGAINAKVRATKSHLNLSLRTRPIHTIGP
Ga0182133_10943921	3300015340	Switchgrass Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATKSRLNLSLRTRP
Ga0182133_11039061	3300015340	Switchgrass Phyllosphere	MFECISDRFVSALNSMQMGQSGAINAKVRATKSRLNFSLRMRPIHTIGP
Ga0182133_11373501	3300015340	Switchgrass Phyllosphere	HVLLHFVMFGCIWERFVTALNSMQMGQSGAINAKVRVTMSRLNLSLQTHPIHTIGP*
Ga0182115_12883661	3300015348	Switchgrass Phyllosphere	VFLLHYVMLGCIYDRFVTTLNSVQMDQSGAINVKVRATKSHLNWSLQTR
Ga0182163_11337931	3300015350	Switchgrass Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNSRL
Ga0182169_13165711	3300015352	Switchgrass Phyllosphere	MFGSIWDRFATALNSVQMGQSGAIKAKVRATKSRLNLSL
Ga0182179_11498321	3300015353	Switchgrass Phyllosphere	MFGSIWDRFVTALNSVQMGQSSAINAKVRVTMSRLN
Ga0182167_10956971	3300015354	Switchgrass Phyllosphere	MFGCIYDRFVIALNSVQMGQSGAINAKVRATKSRLNLSLRTRPIH
Ga0182167_13651881	3300015354	Switchgrass Phyllosphere	MFLLHFIMFGCIYDHFVTALNSVQMGQSGATNAKVHVTKSRLNLSLRTCPIH
Ga0182195_11593321	3300017414	Switchgrass Phyllosphere	MFGCIWDRFVTALNSVQVGQSGAINAKVRVTKSRLNL
Ga0182213_11525801	3300017421	Switchgrass Phyllosphere	KLKFLLHFLKFGCIYDRFVIALNLVQMGHSGAIKAKVRATKTHLNLSLQTLSIHTIGP
Ga0182213_11525802	3300017421	Switchgrass Phyllosphere	MFGCIYDRFVTALNSVQMGQSGAINAKDRAANSRQFFSQRTHP
Ga0182213_12475101	3300017421	Switchgrass Phyllosphere	MFGSIWDRFATVLNSVQMGQSGAINAKVCATKSRLNLSLR
Ga0182201_11034451	3300017422	Switchgrass Phyllosphere	MFLLHLVMFGCIWDRFVTALNSVQMGQSGATNAKV
Ga0182214_11007181	3300017440	Switchgrass Phyllosphere	MFWCIWDRFVTALNSVQMGQSGAINAKVRVTKSRLNL
Ga0182216_11438291	3300017693	Switchgrass Phyllosphere	MFLLHFIMFGCIYDRFVATLNSVQMGQSGEINAKVR
Ga0182211_11667281	3300017694	Switchgrass Phyllosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRTRPIHTIGPQTHVLVCFIMF
Ga0182178_10069281	3300020023	Switchgrass Phyllosphere	MFGCIWDRFVTALNSVQMGQSGAINAKVRVTMSRLNLSLRTCQIH
Ga0182178_10083591	3300020023	Switchgrass Phyllosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQFGAINAKVRATKSHLNLSLRTRP
Ga0182178_10155811	3300020023	Switchgrass Phyllosphere	MFLLHFVMFGCIYDCFVTALNSVQMGQSGAINAKV
Ga0182146_1038351	3300020033	Switchgrass Phyllosphere	MFGCIYDCFVTALNSVQMGQSGAINAKVRATKSRLNL
Ga0207670_102966582	3300025936	Switchgrass Rhizosphere	GCIRDHFVTALNSVQMGQSGATNAKVRVTKSRLNL
Ga0207668_103666021	3300025972	Switchgrass Rhizosphere	MFLLHFVMFGCIYYRFVATLNLVQMGQFGAINAKVRITKSRLNLSLRTH
Ga0207668_118066461	3300025972	Switchgrass Rhizosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLSLSLRTRPIHTN
Ga0207703_123351781	3300026035	Switchgrass Rhizosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRT
Ga0207641_109084211	3300026088	Switchgrass Rhizosphere	TRPIHTMGPKTHVLLHFVMFGCIWDRFVTALNSMQLDQSGAINVKVRATKLRLNLSQRMRPIHTIGP
Ga0207675_1023203711	3300026118	Switchgrass Rhizosphere	MFLLHFVTFGCIYDHFVTARNLVQMGHSGAINAKVRATKSRLNLSL
Ga0207439_1019442	3300026740	Soil	MFLLHFVMFGCIYDHFVTALNSAQMGQSGAINAKVRATKSRL
Ga0268322_10018611	3300028049	Phyllosphere	MFLLHFVMFGCIYYRFVATLNSVQMGQSGAINAKVRATKSHMNLSLRMRPIHT
Ga0268322_10024351	3300028049	Phyllosphere	MFGCIWDRFVTALNSVQMGQSGAINAKVRVTMSRLN
Ga0268322_10155201	3300028049	Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNSRLNLSLRTRPIHTN
Ga0268322_10511851	3300028049	Phyllosphere	MFLLHFVMFGCLYYRFVATLNSVQMGQSGAINAKVRATKSHMNLSLRMRPIHT
Ga0268322_10514861	3300028049	Phyllosphere	MFLMHFVTFGCIYDRFVTELNLVQMGHSCAINAKVCATKSRLNLSQR
Ga0268328_10031371	3300028050	Phyllosphere	MFLLHFVMFGCLYYHFVATLNSVQMGQSGAINAKVRATKSHMNLS
Ga0268328_10639981	3300028050	Phyllosphere	MFLLHLVMFGCIWDRFVTALNSVQMGQSGATNAKVCVTKSRLNLSLRT
Ga0268344_10094201	3300028051	Phyllosphere	MFLLHFVMFGCIYDRFVATLNSVQMGQSGEINAKVRATKSHLNLSLRMCPIHTIG
Ga0268346_10330981	3300028053	Phyllosphere	MFLLHFIMFGCIYDHFVTALNSVQMGQSGATNAKVHVTKSRLNLSLRTCPIHTIG
Ga0268338_10021511	3300028055	Phyllosphere	MFGCIWDRFVTALNSVQMGQSGAINAKVRVTMSRLNLSLR
Ga0268352_10365301	3300028057	Phyllosphere	MFLLHFVMFGCIDGRFVTALNSVQMGQSGAINAKVRATKLRLNLSLRTRLIHTIGP
Ga0268332_10111481	3300028058	Phyllosphere	MPWDPKLMFLMHFVMFGCIYDRFVATLNSVQMGRTGVINAKVHATK
Ga0268314_10162891	3300028061	Phyllosphere	MFLLHFVTFGCIYDRFVTALNLVQMGHSGAINAKVRATKSRLNF
Ga0268314_10293161	3300028061	Phyllosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQFGAINAKVRATKSHLN
Ga0268340_10541801	3300028064	Phyllosphere	MFLLHFVMFGCLYYHFVATLNSVQMGQSGAINAKVRATKSHMNLSLRM
Ga0268355_10116391	3300028139	Phyllosphere	MFLLHFVMFGCIYYRFVATLNSVQMGQSGAINAKV
Ga0268347_10016741	3300028142	Phyllosphere	MFLLHFVMFGCLYYRFVATLNSVQMGQSGAINAKVRATKSHMNFSLRMR
Ga0268347_10065001	3300028142	Phyllosphere	MFLLHLVMFGCIWDRFVTALNSVQMGQSGATNAKVRVTKSRLNLS
Ga0268348_10127211	3300028143	Phyllosphere	MFWCIWERFVTALNSMQMGQSGAINAKVRVTKSRLNL
Ga0268354_10230311	3300028148	Phyllosphere	MFLLHFVMLGCIYYCFVATLNSVQMGQSGAINAKVRITK
Ga0268354_10236521	3300028148	Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATK
Ga0268353_1083811	3300028149	Phyllosphere	MFLLHFVMFGCLYYRFVATLNSVQMGQSGAINAKVRATKSHM
Ga0268343_10066151	3300028150	Phyllosphere	VLFHFVMFGSIWDRFATALNSVQMGQSGAIKAKVRATKSRLNLSLRTRPMHTIGP
Ga0268308_10028431	3300028151	Phyllosphere	MFLLHFVMFGCIYYRFVATLNLVQMGQFGAINAKVRITKSRLNLSLRTRPIHTIGP
Ga0268320_10301551	3300028153	Phyllosphere	MFGCIYDRFVATLNSVQMGQSGEINAKVRATKSHLNLSLRMRP
Ga0268341_10010501	3300028154	Phyllosphere	HVLLHFVMFGCIWDRFITALNSVKMSQSVAINAKVGATKSRLNLSLRTRPIHTNGP
Ga0268318_1006041	3300028157	Phyllosphere	MFLLHFVMFGCIYDHFVTALNSAQMGQSGAINAKVRATKSRLNFSLRTH
Ga0268312_10039471	3300028248	Phyllosphere	HVLFLFIMFGCIWDRFVTALNSVQMGQSGATNAKVRATKSRLNLSL
Ga0268324_10073951	3300028251	Phyllosphere	MFLLHFVMFGCIYDCFVTALNSVQMGQSGAINVKV
Ga0268325_1022081	3300028463	Phyllosphere	MFLLHFVMFECIYDHFVTALNSAQMGQSGAINAKVRATKSRLN
Ga0268325_1037541	3300028463	Phyllosphere	MFLLHFVMFGCIYYRFVATLNLVQMGQFGAINAKVRITKSRLNFS
Ga0268317_10007981	3300028468	Phyllosphere	MFGCIYDRFVIALNSVQMGQSGAINAKVRATKSRWNFSLRTH
Ga0268317_10028221	3300028468	Phyllosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLR
Ga0268337_10052891	3300028469	Phyllosphere	MFLLHFVMFGCIYDRFVTALNSVQMGQSGAINAKVRATKSHLNLSLRTRPIHTIGPQTHV
Ga0268323_10099191	3300028471	Phyllosphere	MFLLHFVMFGCIYDRFVATLNSLQMGQSGAINAKVRATKSHMNLSLQTRPIHTIGP
Ga0268315_10078171	3300028472	Phyllosphere	MFLLHFVIFGCIYDRFVTALNSVQMGQSGAINAKVRATKSRLNLSLRTRPIHTIGS
Ga0268319_10101541	3300028473	Phyllosphere	MFLLHFVMFGCIYDYFVTALNSVQMGQSGAINAKVRATNSRLNL
Ga0268327_10007141	3300028475	Phyllosphere	TMGPQTHVLLHFVMFGCIWERFVTALNSMQMGQSGAINAKVRVTMSRLNLSLQTRPIHTIGP
Ga0268327_10219811	3300028475	Phyllosphere	LFHFVMFGSIWDRFATALNTVQMGQSGAINAKVRATWSRLNLTLRTRPIHTIGP
Ga0268329_10239101	3300028476	Phyllosphere	MFVCIWDRFVTALNSVQMGQSGAIHAKVRVTKSRLNLSL
Ga0268329_10296381	3300028476	Phyllosphere	VFLLHYVMFGCIYDRFVATLNLVQMGQSGAINAKVCVTMSCL
Ga0268313_10122671	3300028523	Phyllosphere	MFGCIYDRFVATLNSVQMGQSGEINAKVRATKSCRN
Ga0268339_10087752	3300028526	Phyllosphere	MFGCIYDYFVATLNSVQMGQSGEINAKVRATKSHM
Ga0268339_10191791	3300028526	Phyllosphere	VFLFHYVMFGCIYDRFVTTLNSVQMDQSGAINVKVCATKSHRNW
Ga0268335_10039341	3300028527	Phyllosphere	MFLLHFVMFGCIYDCFVTALNSVQTGQSGAINVKVRA
Ga0268335_10111591	3300028527	Phyllosphere	MVGCIWDRFVTALNSMEMGQSIAINAKVRVTKSRLNLSLRTHSIHT
Ga0214493_11564112	3300032465	Switchgrass Phyllosphere	MFGCIWERFLTALNSMQMGQSGPINAKVRVTNSRMNLS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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