Metagenome Family F047613

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F047613
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	62 residues
Representative Sequence	MNRKLQDSERGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMGLGLLFFGLQQWLSD
Number of Associated Samples	102
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.84 %
% of genes near scaffold ends (potentially truncated)	15.44 %
% of genes from short scaffolds (< 2000 bps)	81.21 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (75.168 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (35.571 % of family members)
Environment Ontology (ENVO)	Unclassified (52.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.718 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.22% β-sheet: 0.00% Coil/Unstructured: 47.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF02219	MTHFR	24.83
PF01261	AP_endonuc_2	12.08
PF00266	Aminotran_5	4.03
PF02774	Semialdhyde_dhC	3.36
PF01118	Semialdhyde_dh	2.01
PF04493	Endonuclease_5	1.34
PF02518	HATPase_c	1.34
PF00174	Oxidored_molyb	1.34
PF04134	DCC1-like	0.67
PF12127	FloA	0.67
PF12439	GDE_N	0.67
PF07676	PD40	0.67
PF02545	Maf	0.67
PF13490	zf-HC2	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	24.83
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	3.36
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	3.36
COG1515	Deoxyinosine 3'-endonuclease (endonuclease V)	Replication, recombination and repair [L]	1.34
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.34
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.34
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.67
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.17 %
Unclassified	root	N/A	24.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.17 %
Unclassified	root	N/A	24.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.17 %
Unclassified	root	N/A	24.83 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	44.97 %
Unclassified	root	N/A	24.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	44.30 %
Unclassified	root	N/A	24.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	28.86 %
Unclassified	root	N/A	24.83 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	10.74 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.86 %
Unclassified	root	N/A	24.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	10.07 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.86 %
Unclassified	root	N/A	24.83 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	4.70 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.86 %
Unclassified	root	N/A	24.83 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	4.70 %
Legionella wadsworthii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella wadsworthii	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.86 %
Unclassified	root	N/A	24.83 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4.70 %
Legionella wadsworthii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella wadsworthii	0.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.67 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10186792	Not Available	1011	Open in IMG/M
3300005166\|Ga0066674_10065450	Not Available	1658	Open in IMG/M
3300005167\|Ga0066672_10000505	All Organisms → cellular organisms → Bacteria	12062	Open in IMG/M
3300005172\|Ga0066683_10122768	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005175\|Ga0066673_10075785	Not Available	1758	Open in IMG/M
3300005175\|Ga0066673_10567270	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005176\|Ga0066679_10602143	Not Available	717	Open in IMG/M
3300005179\|Ga0066684_10352821	Not Available	984	Open in IMG/M
3300005179\|Ga0066684_10442308	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	874	Open in IMG/M
3300005180\|Ga0066685_10064569	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300005180\|Ga0066685_10204176	Not Available	1356	Open in IMG/M
3300005180\|Ga0066685_10552238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella wadsworthii	794	Open in IMG/M
3300005181\|Ga0066678_10741649	Not Available	652	Open in IMG/M
3300005181\|Ga0066678_10806261	Not Available	620	Open in IMG/M
3300005186\|Ga0066676_10510557	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005186\|Ga0066676_10598875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300005187\|Ga0066675_10052019	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300005187\|Ga0066675_10671455	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005330\|Ga0070690_100339779	Not Available	1087	Open in IMG/M
3300005365\|Ga0070688_100418009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996	Open in IMG/M
3300005440\|Ga0070705_101498999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300005445\|Ga0070708_100715579	Not Available	942	Open in IMG/M
3300005445\|Ga0070708_101281598	Not Available	685	Open in IMG/M
3300005445\|Ga0070708_101570047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300005450\|Ga0066682_10159496	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300005450\|Ga0066682_10240775	Not Available	1164	Open in IMG/M
3300005450\|Ga0066682_10616514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300005451\|Ga0066681_10341783	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005451\|Ga0066681_10534446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300005451\|Ga0066681_10756923	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005466\|Ga0070685_10895520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300005526\|Ga0073909_10251680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300005552\|Ga0066701_10005869	All Organisms → cellular organisms → Bacteria	5151	Open in IMG/M
3300005553\|Ga0066695_10424058	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005557\|Ga0066704_10093143	Not Available	1969	Open in IMG/M
3300005557\|Ga0066704_10570983	Not Available	733	Open in IMG/M
3300005558\|Ga0066698_10063938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2356	Open in IMG/M
3300005558\|Ga0066698_10358217	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005559\|Ga0066700_10108273	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300005561\|Ga0066699_10338167	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005569\|Ga0066705_10130465	All Organisms → cellular organisms → Bacteria → PVC group	1525	Open in IMG/M
3300005575\|Ga0066702_10303116	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005586\|Ga0066691_10477463	Not Available	745	Open in IMG/M
3300006034\|Ga0066656_10253298	Not Available	1131	Open in IMG/M
3300006046\|Ga0066652_100052031	All Organisms → cellular organisms → Bacteria	3089	Open in IMG/M
3300006791\|Ga0066653_10338182	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006796\|Ga0066665_10016774	All Organisms → cellular organisms → Bacteria	4468	Open in IMG/M
3300006796\|Ga0066665_10343889	Not Available	1214	Open in IMG/M
3300006796\|Ga0066665_10484354	Not Available	1016	Open in IMG/M
3300006796\|Ga0066665_11377685	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300006797\|Ga0066659_10720589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300006804\|Ga0079221_11457785	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006806\|Ga0079220_10112629	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300006852\|Ga0075433_11318713	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006904\|Ga0075424_101665780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300006914\|Ga0075436_100380854	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300007258\|Ga0099793_10621508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300009012\|Ga0066710_100005861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11333	Open in IMG/M
3300009012\|Ga0066710_100104811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3797	Open in IMG/M
3300009012\|Ga0066710_100726195	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009012\|Ga0066710_103865829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300009094\|Ga0111539_10188873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2405	Open in IMG/M
3300009094\|Ga0111539_10203855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2306	Open in IMG/M
3300009137\|Ga0066709_100046858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4829	Open in IMG/M
3300009137\|Ga0066709_102619175	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009162\|Ga0075423_11281860	Not Available	783	Open in IMG/M
3300010303\|Ga0134082_10314964	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010329\|Ga0134111_10091639	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300010337\|Ga0134062_10092869	Not Available	1287	Open in IMG/M
3300010371\|Ga0134125_11983972	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300010403\|Ga0134123_10291549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1442	Open in IMG/M
3300012189\|Ga0137388_10488465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1143	Open in IMG/M
3300012189\|Ga0137388_11606230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012199\|Ga0137383_10735047	Not Available	721	Open in IMG/M
3300012199\|Ga0137383_10773961	Not Available	701	Open in IMG/M
3300012201\|Ga0137365_10559523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	839	Open in IMG/M
3300012201\|Ga0137365_10791440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300012201\|Ga0137365_11037195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300012203\|Ga0137399_10278049	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300012204\|Ga0137374_10030909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5857	Open in IMG/M
3300012206\|Ga0137380_10014129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7278	Open in IMG/M
3300012206\|Ga0137380_10523679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1042	Open in IMG/M
3300012206\|Ga0137380_11530613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300012207\|Ga0137381_11142986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300012208\|Ga0137376_11023071	Not Available	707	Open in IMG/M
3300012210\|Ga0137378_10168799	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300012210\|Ga0137378_11037384	Not Available	734	Open in IMG/M
3300012210\|Ga0137378_11614433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012211\|Ga0137377_10304542	Not Available	1528	Open in IMG/M
3300012285\|Ga0137370_10157199	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012285\|Ga0137370_10176807	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300012285\|Ga0137370_10653927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300012350\|Ga0137372_10070968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2998	Open in IMG/M
3300012350\|Ga0137372_10086730	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300012350\|Ga0137372_10450327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300012350\|Ga0137372_11108895	Not Available	542	Open in IMG/M
3300012353\|Ga0137367_10020510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5171	Open in IMG/M
3300012354\|Ga0137366_10337618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1104	Open in IMG/M
3300012354\|Ga0137366_10609381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	783	Open in IMG/M
3300012356\|Ga0137371_10126425	Not Available	1998	Open in IMG/M
3300012356\|Ga0137371_11157687	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012357\|Ga0137384_11112109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300012358\|Ga0137368_10099662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2258	Open in IMG/M
3300012359\|Ga0137385_10455276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300012360\|Ga0137375_10853863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300012360\|Ga0137375_11140399	Not Available	602	Open in IMG/M
3300012532\|Ga0137373_10946379	Not Available	628	Open in IMG/M
3300012683\|Ga0137398_10466182	Not Available	866	Open in IMG/M
3300012918\|Ga0137396_10699626	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300012944\|Ga0137410_10799710	Not Available	792	Open in IMG/M
3300014154\|Ga0134075_10270177	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300014166\|Ga0134079_10537078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	571	Open in IMG/M
3300014166\|Ga0134079_10586956	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300015374\|Ga0132255_105270061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300017656\|Ga0134112_10449855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300018071\|Ga0184618_10235914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300018431\|Ga0066655_10280739	Not Available	1078	Open in IMG/M
3300018431\|Ga0066655_10315030	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300018433\|Ga0066667_10095789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1959	Open in IMG/M
3300018468\|Ga0066662_12164552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300018482\|Ga0066669_10568971	Not Available	990	Open in IMG/M
3300018482\|Ga0066669_11610053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300019888\|Ga0193751_1056153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1670	Open in IMG/M
3300020022\|Ga0193733_1156156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300021344\|Ga0193719_10147030	Not Available	1018	Open in IMG/M
3300021413\|Ga0193750_1006396	Not Available	3061	Open in IMG/M
3300025910\|Ga0207684_10136065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2110	Open in IMG/M
3300025936\|Ga0207670_10012431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4982	Open in IMG/M
3300026277\|Ga0209350_1025714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1787	Open in IMG/M
3300026296\|Ga0209235_1262908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300026300\|Ga0209027_1204156	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026307\|Ga0209469_1078826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	987	Open in IMG/M
3300026310\|Ga0209239_1041653	Not Available	2113	Open in IMG/M
3300026313\|Ga0209761_1139444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1157	Open in IMG/M
3300026316\|Ga0209155_1269044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300026317\|Ga0209154_1001954	All Organisms → cellular organisms → Bacteria	11796	Open in IMG/M
3300026323\|Ga0209472_1195677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300026328\|Ga0209802_1291591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300026330\|Ga0209473_1184524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300026524\|Ga0209690_1014113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4175	Open in IMG/M
3300026524\|Ga0209690_1158592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300026530\|Ga0209807_1093183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1313	Open in IMG/M
3300026538\|Ga0209056_10018313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6887	Open in IMG/M
3300026538\|Ga0209056_10116126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2139	Open in IMG/M
3300026538\|Ga0209056_10176985	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300026547\|Ga0209156_10123478	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300026547\|Ga0209156_10454305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300027907\|Ga0207428_11227414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.63%
Host-Associated	Host-Associated	5.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.96%
Plants	Host-Associated → Plants	5.37%
Aquatic	Environmental → Aquatic	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.70%
Sediment	Environmental → Aquatic → Sediment	0.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	35.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.01%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101867922	3300002908	Grasslands Soil	MNSKLQDSERGPWDFIMFGLTFYGFVFTLGGVIGASAGVAVTGLIAMGLGLLFFGLQQWLSD*
Ga0066674_100654501	3300005166	Soil	MNRKLQDAERGPLDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQWLAD*
Ga0066672_100005052	3300005167	Soil	MNRHLQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0066683_101227681	3300005172	Soil	MNRHFQDSERGPWDFIMFGATFFGFVFTVGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD*
Ga0066673_100757851	3300005175	Soil	MNRHFQDSERGPWDFIMFGVTFVGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0066673_105672702	3300005175	Soil	MSRKLPEAERSPWDFILFGMTFFGLVLALGGVIIASARVAVTGLIAVGLGLLFFGFQQWLSD*
Ga0066679_106021432	3300005176	Soil	FQDSERGPWDFIMFGATFFGLVFTVGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD*
Ga0066684_103528212	3300005179	Soil	MNKNFPNSERGPWDFVMFGVTFCGFILALGGTIAASRCAAVIGLIAMLLGLHYFGLQQWLSD*
Ga0066684_104423082	3300005179	Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0066685_100645693	3300005180	Soil	MRANLQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVAVTGLMALATGLIFFAVQHWLSD*
Ga0066685_102041762	3300005180	Soil	MNKKFPNSERGPWDFVMFGVTFCGFILALGGVIAASRCAALIGLIAMLLGLHYFGLQQWLSD*
Ga0066685_105522381	3300005180	Soil	MNRNCQNGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFGLQQWLAD*
Ga0066678_107416492	3300005181	Soil	MNTNPRDSERGPWDFIMFGITFYGFLFALGGTIAASPGVAVTGLLAMVLGLLFFALQHWLSD*
Ga0066678_108062611	3300005181	Soil	MNRHFQDSERGPWDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0066676_105105571	3300005186	Soil	MNRNCQNGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFGLQQWLSE*
Ga0066676_105988751	3300005186	Soil	MNRKLQDAERGPLDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQWL
Ga0066675_100520194	3300005187	Soil	MRANLQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVALTGLMALATGLFFFALQHWLSD*
Ga0066675_106714551	3300005187	Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSN*
Ga0070690_1003397791	3300005330	Switchgrass Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVIAASTGVAVTGLMAMGLGLLYFGLQQWLLD*
Ga0070688_1004180092	3300005365	Switchgrass Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVVAASAGVAVTGLMAMGLGLLYFGLQQWLLD*
Ga0070705_1014989991	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVIAASTGVAVTGLMAMGLGLLYFGLQQWLWD*
Ga0070708_1007155791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNKKFPNSERGPWDFVMFGVTFYGFILALGGVIAASRCAALIGLIAMLLGLHYFGLQQWLSD*
Ga0070708_1012815982	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNFHNSERGPWDFIMFGMAFFGFVFALGGVIVASGAVAVTGLMAIGLALLFFGLQDWLAD*
Ga0070708_1015700472	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNRNLQDSERGPWDFIMFGLTFYGFVFALGGVIAASAGVAVTGLMALGLGLLFFGLQQWLSD*
Ga0066682_101594962	3300005450	Soil	MRANLQNSERGPWDFIMFGLIFYGFVLSLTGVIVASAGVALTGLMALATGLIFFALQRWLSD*
Ga0066682_102407752	3300005450	Soil	PNLESSDDMNTNLRDSERGPWDFIMFGLTFFGFIFALGGVIAASPGVAVIGVLAMLLGLSFFGLQRWLSD*
Ga0066682_106165142	3300005450	Soil	MNRNRQDSERGPWDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQWLAD*
Ga0066681_103417832	3300005451	Soil	MNKNFPNSERGPWDFVMFGVTFCGFILALGGVIAASRCAAVIGLIAMLLGLHYFGLQQWLSD*
Ga0066681_105344461	3300005451	Soil	MNKHLQDSERGPWDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0066681_107569232	3300005451	Soil	MRANLQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVAVTGLMALATGLIFFALQRWLSD*
Ga0070685_108955202	3300005466	Switchgrass Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVIVASTGVAVTGLMAMCLGLLYFGLQHWLLD*
Ga0073909_102516802	3300005526	Surface Soil	MNRNLQDSERGPWDFIMFGLTFYGIILTLGGVIAGSAGIAITGLMVIGVGLLF
Ga0066701_100058693	3300005552	Soil	MSRKLPDAERSPWDFILFGMTFFGLVLALGGVIIASAPVAVTGLIAVGLGLLFFGFQQWLSD*
Ga0066695_104240582	3300005553	Soil	MNTNLRDSERGPWDFIMFGLTFFGFIFALGGVIAASPGVAVIGLLAMLLGLSFFGLQRWLSD*
Ga0066704_100931434	3300005557	Soil	MNRHFQDSERGPWDFNMYGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0066704_105709832	3300005557	Soil	MNSKLQDSERGPWDFIMFGLTFYGFVFTLGGVIAASAGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0066698_100639382	3300005558	Soil	MNSKLQDSERGPWDFIMFGLTFCGFVLSLAGVLAASAGVAVTGLMAMGLGLLYFGLQQWLSD*
Ga0066698_103582172	3300005558	Soil	MNRHFQDSERGPWDFIMFGATFFGFVFALGGVTVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0066700_101082733	3300005559	Soil	MSRKLPDAERSPWDFILFGMTFFGLVLALGGVIIASARVAVTGLIAVGLGLLFFGFQQWLSD*
Ga0066699_103381671	3300005561	Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGL
Ga0066705_101304651	3300005569	Soil	GPWDFVMFGVTFCGFILALGGVIAASRCAAVIGLIAMLLGLHYFGLQQWLSD*
Ga0066702_103031162	3300005575	Soil	MNRHFQDSERGPWDFIMFGATFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0066691_104774632	3300005586	Soil	LQNSERGPWDFIMFGLTFCGFVLSLAGVLAASAGVAVTGLMAMGLGLLYFGLQQWLSD*
Ga0066656_102532981	3300006034	Soil	MNRKLQDAERGPLDFIMFGLTFCGFVFTLVGVIAAVVGVAVTGLMVMGLGLLFFGLQQWLAD*
Ga0066652_1000520316	3300006046	Soil	MNRKLRDSERGPWDFIMFGLTFYGFILTLAGVVVGAAGVAVTGLMTMSLGLLFFGIQQWLSD*
Ga0066653_103381821	3300006791	Soil	MNRNLQDAERGPWDFIMFGLTFYGFVFTLAGVVAASTGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0066665_100167743	3300006796	Soil	MNRHFQDSERGPWDFIMFGVAFFGFVFTLGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD*
Ga0066665_103438891	3300006796	Soil	MNRNPQDVERGPWDFIMFGLTFYGFLFTLVGVISACAGFAITGLMAMCLGLLFFGLQQWLSD*
Ga0066665_104843541	3300006796	Soil	MNRKLQDAERGPLDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQSLAD*
Ga0066665_113776851	3300006796	Soil	MNKHLQDSERGPSDFIMFGATFFGFVFALGGVIVASACVAITGLIAMGLGL
Ga0066659_107205892	3300006797	Soil	MNRPFQDLERGPWDFIMFGATFFGFVFAMGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0079221_114577851	3300006804	Agricultural Soil	MNKNIQESERGPWDFIMFGITFFGFVFALGGVIIASAGVAITGLAAMALGFFYYSVQRWLSE*
Ga0079220_101126292	3300006806	Agricultural Soil	MNKNIQESERGPWDFIMFGITFFGFVFALGGVIIASTGVAITGLAAMALGFFYYSVQRWLSE*
Ga0075433_113187131	3300006852	Populus Rhizosphere	MNRNLQDSERGPWDFIMFGLTFYGFIFTLAGVIAASTGVAVTGLMAMGVGLLFFGLQQWLSD*
Ga0075424_1016657802	3300006904	Populus Rhizosphere	MSRNLQDSERGPWDFIMFGLTFCGLIITLVGVIAASAGVAITGLMAIVLGLLFFGVQQWLSE*
Ga0075436_1003808541	3300006914	Populus Rhizosphere	MNRNLQNSERGPGDFIMFGISFYGFILALGGVIVASTGVAVVGLAGMALGLFYYGVQQWLSH*
Ga0099793_106215081	3300007258	Vadose Zone Soil	MNRKLQDSERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAITGLMTMCLGLLFFGLQQWLSS*
Ga0066710_1000058615	3300009012	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGFVFALGGVTVASAGVAITGLIAMGLGLVFFGLQAWLSD
Ga0066710_1001048113	3300009012	Grasslands Soil	MSRKSQESERGPWDFIMFGTAFLGFIFGMTGVIVAAPGVAITGLIAMCVGLLFFGLQEWLSD
Ga0066710_1007261952	3300009012	Grasslands Soil	MNRHFQDLERGPWDFIMFGVTFFGFVLTLGGVIIASAGVAITGLIAMGLGLVFFGLQQWLSD
Ga0066710_1038658291	3300009012	Grasslands Soil	MNRNLQNAERGPWDFIMFGITFYGFVFTLAGVVAASAGVAVTGLMAMGLGLLFFGLQQWLSD
Ga0111539_101888731	3300009094	Populus Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVVAASTGVAVTGLMAMGLGLLYFGLQQWLLD*
Ga0111539_102038551	3300009094	Populus Rhizosphere	MNKNLQDSERGPWDFIMFGLTFYGIVLTLGGIIAASAGLAITGLMAIALGLLFFGLQQWLSD*
Ga0066709_1000468584	3300009137	Grasslands Soil	MNRNLQDSERGPWDFIMFGVTFYGFVFTLGGVIAASAGVALTGLIAMGVGLLFFAIQQWLSD*
Ga0066709_1026191751	3300009137	Grasslands Soil	MNRHLQDSERGPWDFIMFGVTFFGFVLTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0075423_112818602	3300009162	Populus Rhizosphere	MNEKLQNAERGPWDFIMFGLTFYGFVFALGGVIAAAAGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0134082_103149642	3300010303	Grasslands Soil	MNKHLQDSERGPSDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0134111_100916392	3300010329	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGFVFTVGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0134062_100928691	3300010337	Grasslands Soil	MNRKLQDAERGPLDFIMFGLTFCGFVFTLVGVIAAAAGVAVTGLKVMALGLLFFGLQQWLAD*
Ga0134125_119839722	3300010371	Terrestrial Soil	MNKNIQESERGPWDFIMFGITFFGFVFALGGVIIASAGVAITGLAAMVLGLFYYCVQRWLSE*
Ga0134123_102915492	3300010403	Terrestrial Soil	MNRKLRDSERGPWDFIMFGLTFYGFILTLAGVVVGSAGVAVTGLMTMSLGLLFFGIQQWLSD*
Ga0137388_104884651	3300012189	Vadose Zone Soil	MNRNCQNGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFGLQQWLSD*
Ga0137388_116062302	3300012189	Vadose Zone Soil	MNSKLQDSERGPWDFIMFGLTFFGFVLALGGVIAASAGVAVTGLMVLGLGLLYFGLQQWLSD*
Ga0137383_107350472	3300012199	Vadose Zone Soil	MNTYLRDYQRGPWDFIMFAVVFYGFLFALGGTIAASPGVAVTGLFAMILGLLFFALQHWLSD*
Ga0137383_107739611	3300012199	Vadose Zone Soil	RGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMGMGLLFFGLQQWLSD*
Ga0137365_105595231	3300012201	Vadose Zone Soil	MNGKLQNAERGPWDFIMFGLTFYGFVFTLGGVIAASAGVAVTGLMAMGLGLLFFGFQHWSSD*
Ga0137365_107914401	3300012201	Vadose Zone Soil	MNRKLQNAERGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMGMGLLFFGLQQWLSD*
Ga0137365_110371952	3300012201	Vadose Zone Soil	MSRKLPDAGRSPWDFIMFGMTFFGLVLALGGVIIASARVAVTGLIAVGLGLLFFGFQQWLSD*
Ga0137399_102780492	3300012203	Vadose Zone Soil	MNRHFQNSERGPWDFIMYGATFFGFVFALGGVIVASAGVAIAGLIAMGLGLVFFGLQAWLSD*
Ga0137374_100309092	3300012204	Vadose Zone Soil	MNRNFQRSERGPWDFIMFGVAFFGFLFALGGVIAASAAVAVSGLLAMCLAILFFGLQHWLSD*
Ga0137380_100141292	3300012206	Vadose Zone Soil	MNRNRQDGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFVLQQWLSE*
Ga0137380_105236793	3300012206	Vadose Zone Soil	VIRGIAFGRRRCVTFPPNLESSDDMNTNLRDSERGPWDFIMFGVTFFGFIFALGGVIAASPCVAVIGLLAMLLGLSFFGLQRWLSD*
Ga0137380_115306131	3300012206	Vadose Zone Soil	MNRNPQDVERGPWDFIMFGLTFYGFLFTLVGVISACAGVAITGLMAMCLGLLFFGLQQWLSD*
Ga0137381_111429861	3300012207	Vadose Zone Soil	MNRNLQDAERGPWDFIMFGITFYGFVFTLAGVVAASAGVAVTGLMAMGLGLLYFGLQQWLSD*
Ga0137376_107067761	3300012208	Vadose Zone Soil	PWDFIMFGVTFFGLVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0137376_110230712	3300012208	Vadose Zone Soil	MKRNLQGSERGPWDFIMFGLTFYGFVFTLGGVIAASAGVAVTGLMAMGLGLLFFGFQHWSSD*
Ga0137378_101687992	3300012210	Vadose Zone Soil	MSKKLPDAERSPWDFILFGMTFFGLVLALGGVIIASARVAVTGLIAVGLGLLFFGFQQWLSD*
Ga0137378_110373842	3300012210	Vadose Zone Soil	MNSKLQDSERGPWDFIMFGLTFYGFVFTLGGGIAASAGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0137378_116144331	3300012210	Vadose Zone Soil	MNRNPQDIERGPWDFIMFGLAFYGFLVTLVGVISACAGVAITGLMAMCLGLLFFGLQQWLSD*
Ga0137377_103045422	3300012211	Vadose Zone Soil	VIRSIAFGRRRCVTFPPNLESSDDMNTNLRDSERGPWDFIMFGVTFFGFIFALGGVIAASPGVAVIGLLAMLLGLSFFGLQRWLSD*
Ga0137370_101571992	3300012285	Vadose Zone Soil	MNKHLQDSERGPSDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWL
Ga0137370_101768072	3300012285	Vadose Zone Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD*
Ga0137370_106539271	3300012285	Vadose Zone Soil	MNRNRQDSERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMAMFLGLLFFGLQQWLSD*
Ga0137372_100709682	3300012350	Vadose Zone Soil	MNRNFQRSERGPWDFIMFGLAFFGFLFALGGVIAASAAVAVSGLLAMCLAFLFFGLQHWLSD*
Ga0137372_100867303	3300012350	Vadose Zone Soil	MNTNPRDSERGPWDFIMFGLLFYGFVLALGGTIAASPAVAVTGLLAMAVGLFFFALQQWLSD*
Ga0137372_104503271	3300012350	Vadose Zone Soil	MNRNRQDTERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMAMFLGLLFFGLQQWLSD*
Ga0137372_111088952	3300012350	Vadose Zone Soil	DRGPWDFVMFGVTFYGFILALGGIVAASRCAAVIGLIAMLLGLHYFGLQQWLSD*
Ga0137367_100205103	3300012353	Vadose Zone Soil	MNRNFQRSERGPWDFIMFGLAFFGFLFALGGVIAASAAVAVSGLLAMCLAILFFGLQHWLSD*
Ga0137366_103376182	3300012354	Vadose Zone Soil	MNRNLQDAERGPWDFIMFGITFYGFVFTLAGVVAASAGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0137366_106093812	3300012354	Vadose Zone Soil	MNRNFQRSERGPWDFIMFGLAFFGVLFALGGVIAGCAAGGVSGLLAMCLAFLFFGLQHWLSD*
Ga0137371_101264252	3300012356	Vadose Zone Soil	MNRKLQNAERGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMVMGLLFFGLQQWLSD*
Ga0137371_111576872	3300012356	Vadose Zone Soil	MNTNLRDSERGPWDFIMFGLTFFGFIFALGGVIAASPGVAVMGLLAMLLGLSFFGLQRWLSD*
Ga0137384_111121092	3300012357	Vadose Zone Soil	MNRKLQDSERGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMGLGLLFFGLQQWLSD*
Ga0137368_100996622	3300012358	Vadose Zone Soil	MNRKLQNAERGPWDFIMFGLTFCGFVFALGGVIAASAGVAVTGLMAMGMGLLFFGLQQWLAD*
Ga0137385_104552762	3300012359	Vadose Zone Soil	MNRNRQDGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFG
Ga0137375_108538631	3300012360	Vadose Zone Soil	MNRNRQDGERGPWDFIMFGVTFYGFIFTLGGVIAASAGVAVTGLMAMFLGLLFFGLQQWLSD*
Ga0137375_111403991	3300012360	Vadose Zone Soil	KNFPNSERGPWDFIMFGLTFYGSIFALGGIIAASRCVAVIGLVAMLLGLHYFGLQQWLSD
Ga0137373_109463791	3300012532	Vadose Zone Soil	MNRNLQDSERGPWDFIMFGLTFFGFIFALGGVIAASPGVAVMGLLAMLLGLSFFGLQRWLSD*
Ga0137398_104661821	3300012683	Vadose Zone Soil	MNRKLQDSERGPWDFIMFGLTFCGFVLTLGGVIAASVGVAVTGLMAMGLGLLFFGFQQSLSD*
Ga0137396_106996262	3300012918	Vadose Zone Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQTWLSD*
Ga0137410_107997101	3300012944	Vadose Zone Soil	MNRNPQDCERGPWDFIMFGLTFCGFVFTLGGVIAASAGVAVTGLMAMCLGLLYFGFQQWLSD*
Ga0134075_102701771	3300014154	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGFVFALGGVTVASAGVAITGLIAMGLGLVFFGLQQWLSD*
Ga0134079_105370781	3300014166	Grasslands Soil	MNRNFRNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVALTGLMALATGLFFFALQHWLSD*
Ga0134079_105869562	3300014166	Grasslands Soil	MNKNFPNSERGPWDFVMFGVTFCGFILALGGVIAASPCAAVIGLIAMLLGLHYFGLQQWLSD*
Ga0132255_1052700611	3300015374	Arabidopsis Rhizosphere	MNRNLQDSERGPWDFIMFGLTFYGFVFTLGGVIAASAGVAITGLMAMGLGLLFFCLQQWLSD*
Ga0134112_104498551	3300017656	Grasslands Soil	MNRNCQNGERGPWDFIMFGLTFYGFIFTLGGVIAASAGVAVTGLMTMCLGLLFFGLQQWLSE
Ga0184618_102359141	3300018071	Groundwater Sediment	MNSKLQNSERGPWDFIMFGLTFCGFVLALGGVIAASAGVAVTGLMAMGLGLLFFGLQQWLSD
Ga0066655_102807392	3300018431	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGFVFTVGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD
Ga0066655_103150302	3300018431	Grasslands Soil	MNIHFQDSERGPWDFIMFGATSFGFVFTVGGVIVASAGVAITGLIAMGLGLLFFGLQQW
Ga0066667_100957892	3300018433	Grasslands Soil	MRANLQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVAVTGLMALATGLIFFAVQHWLSD
Ga0066662_121645522	3300018468	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGLVFTVGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD
Ga0066669_105689712	3300018482	Grasslands Soil	LQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVAVTGLMALATGLIFFALQRWLSD
Ga0066669_116100532	3300018482	Grasslands Soil	FGTRWCDMNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD
Ga0193751_10561532	3300019888	Soil	MNRKLQDSERGPWDFIMFGLTFCGFVLTLGGVIAASVGVAVTGLMAMGLGLLFFGFQQRLSD
Ga0193733_11561562	3300020022	Soil	MNRNFQDSERGPWDFIMFGATFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQT
Ga0193719_101470301	3300021344	Soil	MNRKLQDSERGPWDFMMFGITFYGFVFTLAGVIAASAGVALTGLMAMGVGLLCFAFQQRLSD
Ga0193750_10063963	3300021413	Soil	MNTNPRDSERGPWDFFMFGLIFFGFIFALGGVIAAAAGVAVLGSLAMLLGLSFFGLQRWLSD
Ga0207684_101360652	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNRKLQDSERGPWDFLMFGLTFCGFVLTLGGVIAASAGIAVTGLMAMGLGLLYFGFQQRLSD
Ga0207670_100124315	3300025936	Switchgrass Rhizosphere	MNRNLQDAERGPWDFIMFGLTFYGFVFTLGGVIVASTGVAVTGLMAMCLGLLYFGLQHWLLD
Ga0209350_10257142	3300026277	Grasslands Soil	MNKHLQDSERGPWDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD
Ga0209235_12629081	3300026296	Grasslands Soil	WCNMNRHFQDSERGPWDFIMFGVAFFGFVFTLGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD
Ga0209027_12041562	3300026300	Grasslands Soil	MFGVTFCGFILALGGTIAASRCAAVIGLIAMLLGLHYFGLQQWL
Ga0209469_10788261	3300026307	Soil	MNRKLQDAERGPLDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQWLAD
Ga0209239_10416532	3300026310	Grasslands Soil	MNRHFQDSERGPWDFIMFGATFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD
Ga0209761_11394442	3300026313	Grasslands Soil	MNRHFQDSERGPWDFIMFGVAFFGFVFTLGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD
Ga0209155_12690441	3300026316	Soil	MNKHLQDSERGPSDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD
Ga0209154_10019542	3300026317	Soil	MNRHLQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQAWLSD
Ga0209472_11956772	3300026323	Soil	MRANLQNSERGPWDFIMFGLIFYGFVLALTGVIVASAGVAVTGLMALATGLIFFALQRWLSD
Ga0209802_12915911	3300026328	Soil	MNSKLQDSERGPWDFIMFGLTFYGFVFTLGGVIAASAGVAVTGLMAMGLGLLFFGLQQWLSD
Ga0209473_11845242	3300026330	Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLVFFGLQQWLSD
Ga0209690_10141133	3300026524	Soil	MSRKLPDAERSPWDFILFGMTFFGLVLALGGVIIASAPVAVTGLIAVGLGLLFFGFQQWLSD
Ga0209690_11585921	3300026524	Soil	MNRKLQDAERGPLDFIMFGLTFYGFVFTLVGVIAASAGVAVTGLMVMGLGLLFFGLQQSLAD
Ga0209807_10931832	3300026530	Soil	MNRKLQDAERGPLDFIMFGLTFCGFVFTLVGVIAAAAGVAVTGLIVMALGLLFFGLQQWL
Ga0209056_100183133	3300026538	Soil	MNRNLQDSERGPWDFIMFGVTFYGFVFTLGGVIAASAGVALTGLIAMGVGLLFFAIQQWLSD
Ga0209056_101161262	3300026538	Soil	MNSKLQDSERGPWDFIMFGLTFCGFVLSLAGVLAASAGVAVTGLMAMGLGLLYFGLQQWLSD
Ga0209056_101769853	3300026538	Soil	MNTNPRDSERGPWDFIMFGITFYGFLFALGGTIAASPGVAVTGLLAMVLGLLFFALQHWLSD
Ga0209156_101234782	3300026547	Soil	MNRHFQDSERGPWDFIMFGVTFFGFVFTLGGVIVASAGVAITGLIAMGLGLLFFGLQQWLSD
Ga0209156_104543051	3300026547	Soil	MNKHLQDSERGPSDFIMFGATFFGFVFALGGVIVASAGVAITGLIAMGLGLAFFGLQAWLSD
Ga0207428_112274141	3300027907	Populus Rhizosphere	MNKNLQDSERGPWDFIMFGLTFYGIVLTLGGIIAASAGVAITGLMAIALGLLFFGLQQWLSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047613

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences