Metagenome / Metatranscriptome Family F047801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047801
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	74 residues
Representative Sequence	MDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK
Number of Associated Samples	103
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.54 %
% of genes near scaffold ends (potentially truncated)	22.82 %
% of genes from short scaffolds (< 2000 bps)	88.59 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.799 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.544 % of family members)
Environment Ontology (ENVO)	Unclassified (28.859 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.456 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.27% β-sheet: 0.00% Coil/Unstructured: 36.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.5.1: Prefoldin	d1fxka_	1fxk	0.91953
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.91851
c.49.2.0: automated matches	d5ik2g_	5ik2	0.88566
a.183.1.1: Nop domain	d1nt2b_	1nt2	0.88319
a.25.1.1: Ferritin	d1nfva_	1nfv	0.87017

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF01068	DNA_ligase_A_M	11.41
PF13505	OMP_b-brl	2.01
PF05532	CsbD	2.01
PF00072	Response_reg	1.34
PF00239	Resolvase	1.34
PF03435	Sacchrp_dh_NADP	1.34
PF08241	Methyltransf_11	0.67
PF13191	AAA_16	0.67
PF00486	Trans_reg_C	0.67
PF01321	Creatinase_N	0.67
PF01381	HTH_3	0.67
PF07045	DUF1330	0.67
PF04392	ABC_sub_bind	0.67
PF04773	FecR	0.67
PF02586	SRAP	0.67
PF02954	HTH_8	0.67
PF14534	DUF4440	0.67
PF13011	LZ_Tnp_IS481	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	11.41
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	11.41
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	2.01
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.34
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.34
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	0.67
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.67
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.67
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
All Organisms	root	All Organisms	30.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
cellular organisms	root	All Organisms → cellular organisms	30.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.42 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.01 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.67 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.01 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.67 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.01 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.01 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.67 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.67 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.01 %
Bradyrhizobium sp. WSM2254	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2254	1.34 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.67 %
Bradyrhizobium sp. Y-H1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Y-H1	0.67 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.67 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.01 %
Bradyrhizobium sp. WSM2254	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2254	1.34 %
Rhizobium sp. CCGE 510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. CCGE 510	0.67 %
Bradyrhizobium sp. Y-H1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Y-H1	0.67 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.67 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105555445	Not Available	622	Open in IMG/M
3300003505\|JGIcombinedJ51221_10031133	Not Available	1944	Open in IMG/M
3300003505\|JGIcombinedJ51221_10059671	Not Available	1468	Open in IMG/M
3300003505\|JGIcombinedJ51221_10399226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300004091\|Ga0062387_101495469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. CCGE 510	541	Open in IMG/M
3300004114\|Ga0062593_101129058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	816	Open in IMG/M
3300004114\|Ga0062593_101915422	Not Available	655	Open in IMG/M
3300004479\|Ga0062595_101311817	Not Available	652	Open in IMG/M
3300005163\|Ga0066823_10116700	Not Available	563	Open in IMG/M
3300005339\|Ga0070660_101714868	Not Available	535	Open in IMG/M
3300005354\|Ga0070675_101841213	Not Available	558	Open in IMG/M
3300005355\|Ga0070671_100287677	Not Available	1398	Open in IMG/M
3300005434\|Ga0070709_10735148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	770	Open in IMG/M
3300005436\|Ga0070713_101343477	Not Available	693	Open in IMG/M
3300005439\|Ga0070711_100349194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1189	Open in IMG/M
3300005439\|Ga0070711_101964810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2254	514	Open in IMG/M
3300006028\|Ga0070717_10133382	Not Available	2137	Open in IMG/M
3300006041\|Ga0075023_100511170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2254	543	Open in IMG/M
3300006046\|Ga0066652_101772752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	559	Open in IMG/M
3300006059\|Ga0075017_101049197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300006059\|Ga0075017_101543274	Not Available	524	Open in IMG/M
3300006162\|Ga0075030_100815992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	737	Open in IMG/M
3300006175\|Ga0070712_101531976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300006176\|Ga0070765_100320279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1437	Open in IMG/M
3300006176\|Ga0070765_100388395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1301	Open in IMG/M
3300006176\|Ga0070765_101526736	Not Available	628	Open in IMG/M
3300006354\|Ga0075021_10151013	Not Available	1403	Open in IMG/M
3300006578\|Ga0074059_11529295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300006804\|Ga0079221_11171285	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006854\|Ga0075425_102283163	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006893\|Ga0073928_10032720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4962	Open in IMG/M
3300006893\|Ga0073928_10119225	Not Available	2177	Open in IMG/M
3300006893\|Ga0073928_10242042	Not Available	1385	Open in IMG/M
3300006953\|Ga0074063_13145032	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300007982\|Ga0102924_1062894	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300007982\|Ga0102924_1264723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300007982\|Ga0102924_1388026	Not Available	529	Open in IMG/M
3300009098\|Ga0105245_12574151	Not Available	562	Open in IMG/M
3300009148\|Ga0105243_11524241	Not Available	693	Open in IMG/M
3300009521\|Ga0116222_1168605	Not Available	942	Open in IMG/M
3300009522\|Ga0116218_1095356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300009522\|Ga0116218_1174472	Not Available	974	Open in IMG/M
3300009698\|Ga0116216_10104044	Not Available	1747	Open in IMG/M
3300009700\|Ga0116217_10269939	Not Available	1100	Open in IMG/M
3300010375\|Ga0105239_11030791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	946	Open in IMG/M
3300010375\|Ga0105239_11510965	Not Available	776	Open in IMG/M
3300010379\|Ga0136449_100227963	Not Available	3493	Open in IMG/M
3300010401\|Ga0134121_12575434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300012951\|Ga0164300_10946384	Not Available	549	Open in IMG/M
3300012955\|Ga0164298_10338299	Not Available	948	Open in IMG/M
3300012957\|Ga0164303_10518664	Not Available	767	Open in IMG/M
3300012957\|Ga0164303_10713288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300012958\|Ga0164299_11065429	Not Available	601	Open in IMG/M
3300012960\|Ga0164301_10890149	Not Available	690	Open in IMG/M
3300012960\|Ga0164301_11739595	Not Available	522	Open in IMG/M
3300012961\|Ga0164302_10091768	Not Available	1652	Open in IMG/M
3300012984\|Ga0164309_11612620	Not Available	556	Open in IMG/M
3300012989\|Ga0164305_11732780	Not Available	562	Open in IMG/M
3300012989\|Ga0164305_11970116	Not Available	532	Open in IMG/M
3300014164\|Ga0181532_10734180	Not Available	531	Open in IMG/M
3300014325\|Ga0163163_11208335	Not Available	818	Open in IMG/M
3300014325\|Ga0163163_12024642	Not Available	636	Open in IMG/M
3300015371\|Ga0132258_11537295	Not Available	1680	Open in IMG/M
3300015371\|Ga0132258_11871165	Not Available	1511	Open in IMG/M
3300015371\|Ga0132258_13231516	Not Available	1123	Open in IMG/M
3300015373\|Ga0132257_103049551	Not Available	610	Open in IMG/M
3300015373\|Ga0132257_103660193	Not Available	559	Open in IMG/M
3300016270\|Ga0182036_10501666	Not Available	961	Open in IMG/M
3300016404\|Ga0182037_11452602	Not Available	607	Open in IMG/M
3300016445\|Ga0182038_11652843	Not Available	577	Open in IMG/M
3300017995\|Ga0187816_10312498	Not Available	691	Open in IMG/M
3300019194\|Ga0184586_112668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1254	Open in IMG/M
3300019361\|Ga0173482_10125396	Not Available	968	Open in IMG/M
3300020579\|Ga0210407_10013227	All Organisms → cellular organisms → Bacteria → Proteobacteria	6146	Open in IMG/M
3300020579\|Ga0210407_10061867	All Organisms → cellular organisms → Bacteria → Proteobacteria	2804	Open in IMG/M
3300020579\|Ga0210407_10200078	Not Available	1552	Open in IMG/M
3300020579\|Ga0210407_10423860	Not Available	1041	Open in IMG/M
3300020579\|Ga0210407_10591250	Not Available	865	Open in IMG/M
3300020579\|Ga0210407_10991409	Not Available	641	Open in IMG/M
3300020580\|Ga0210403_10398125	Not Available	1124	Open in IMG/M
3300020582\|Ga0210395_11017709	Not Available	613	Open in IMG/M
3300020583\|Ga0210401_10615881	Not Available	947	Open in IMG/M
3300021088\|Ga0210404_10150845	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300021088\|Ga0210404_10174124	Not Available	1141	Open in IMG/M
3300021168\|Ga0210406_10005962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Y-H1	12672	Open in IMG/M
3300021168\|Ga0210406_10162848	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300021168\|Ga0210406_10545003	Not Available	912	Open in IMG/M
3300021168\|Ga0210406_10722578	Not Available	765	Open in IMG/M
3300021178\|Ga0210408_10044396	Not Available	3481	Open in IMG/M
3300021178\|Ga0210408_10334531	Not Available	1207	Open in IMG/M
3300021178\|Ga0210408_10558164	Not Available	908	Open in IMG/M
3300021181\|Ga0210388_11493318	Not Available	565	Open in IMG/M
3300021401\|Ga0210393_10374060	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300021401\|Ga0210393_11294492	Not Available	585	Open in IMG/M
3300021401\|Ga0210393_11510243	Not Available	534	Open in IMG/M
3300021402\|Ga0210385_11290431	Not Available	560	Open in IMG/M
3300021404\|Ga0210389_10458707	Not Available	1003	Open in IMG/M
3300021404\|Ga0210389_10509287	Not Available	947	Open in IMG/M
3300021405\|Ga0210387_11020203	Not Available	724	Open in IMG/M
3300021406\|Ga0210386_11579243	Not Available	545	Open in IMG/M
3300021420\|Ga0210394_10403399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
3300021420\|Ga0210394_10914668	Not Available	763	Open in IMG/M
3300021432\|Ga0210384_10812823	Not Available	833	Open in IMG/M
3300021433\|Ga0210391_11165295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M
3300021474\|Ga0210390_10539109	Not Available	981	Open in IMG/M
3300021475\|Ga0210392_10335846	Not Available	1090	Open in IMG/M
3300021478\|Ga0210402_10077136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2956	Open in IMG/M
3300021478\|Ga0210402_10559138	Not Available	1061	Open in IMG/M
3300021478\|Ga0210402_11069529	Not Available	734	Open in IMG/M
3300021479\|Ga0210410_10695467	Not Available	898	Open in IMG/M
3300022507\|Ga0222729_1050630	Not Available	574	Open in IMG/M
3300022510\|Ga0242652_1022090	Not Available	688	Open in IMG/M
3300022530\|Ga0242658_1104836	Not Available	682	Open in IMG/M
3300022532\|Ga0242655_10096340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300022557\|Ga0212123_10016068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9211	Open in IMG/M
3300022557\|Ga0212123_10023312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6833	Open in IMG/M
3300022557\|Ga0212123_10081428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	2731	Open in IMG/M
3300022557\|Ga0212123_10097300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2416	Open in IMG/M
3300022557\|Ga0212123_10220104	Not Available	1388	Open in IMG/M
3300022712\|Ga0242653_1052043	Not Available	667	Open in IMG/M
3300022718\|Ga0242675_1044242	Not Available	726	Open in IMG/M
3300022722\|Ga0242657_1043356	Not Available	961	Open in IMG/M
3300022724\|Ga0242665_10150449	Not Available	735	Open in IMG/M
3300022726\|Ga0242654_10105571	Not Available	891	Open in IMG/M
3300024271\|Ga0224564_1135188	Not Available	508	Open in IMG/M
3300025919\|Ga0207657_11071971	Not Available	616	Open in IMG/M
3300025926\|Ga0207659_10913418	Not Available	755	Open in IMG/M
3300025931\|Ga0207644_10315849	Not Available	1262	Open in IMG/M
3300027069\|Ga0208859_1042537	Not Available	531	Open in IMG/M
3300027070\|Ga0208365_1029030	Not Available	726	Open in IMG/M
3300027095\|Ga0208606_107804	Not Available	509	Open in IMG/M
3300027174\|Ga0207948_1033068	Not Available	620	Open in IMG/M
3300027884\|Ga0209275_10110541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1418	Open in IMG/M
3300027915\|Ga0209069_10204958	Not Available	1008	Open in IMG/M
3300027915\|Ga0209069_10423654	Not Available	734	Open in IMG/M
3300028906\|Ga0308309_10329840	Not Available	1297	Open in IMG/M
3300029636\|Ga0222749_10393072	Not Available	734	Open in IMG/M
3300030494\|Ga0310037_10324243	Not Available	651	Open in IMG/M
3300031170\|Ga0307498_10250664	Not Available	642	Open in IMG/M
3300031708\|Ga0310686_102491890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1675	Open in IMG/M
3300031708\|Ga0310686_104140599	Not Available	1242	Open in IMG/M
3300031708\|Ga0310686_109580351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1462	Open in IMG/M
3300031708\|Ga0310686_119008145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4679	Open in IMG/M
3300031716\|Ga0310813_11469723	Not Available	634	Open in IMG/M
3300032119\|Ga0316051_1010233	Not Available	769	Open in IMG/M
3300032160\|Ga0311301_10050666	All Organisms → cellular organisms → Bacteria → Proteobacteria	9514	Open in IMG/M
3300032160\|Ga0311301_10153119	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300032174\|Ga0307470_11178134	Not Available	621	Open in IMG/M
3300032261\|Ga0306920_102514590	Not Available	708	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.92%
Host-Associated	Host-Associated	12.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.83%
Aquatic	Environmental → Aquatic	14.09%
Plants	Host-Associated → Plants	12.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	7.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.38%
Sediment	Environmental → Aquatic → Sediment	4.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.36%
Freshwater	Environmental → Aquatic → Freshwater	2.01%
Roots	Host-Associated → Plants → Roots	1.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.75%
Loam	Environmental → Terrestrial → Soil → Loam	12.08%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	7.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.01%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.34%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.05%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	7.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.34%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.09%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	7.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300019194	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027095	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1055554451	3300000364	Soil	LVRYPRPIAIQPPGSKRDARLVVMPNMDFSAIQKRLTEIEEQIALGQRQVAQQQEVIVKLEADGQSATHAKYLLAGLELLQAARRDSRDKLLKRLDEVE*
JGIcombinedJ51221_100311333	3300003505	Forest Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLVAELETNGSSASHAKYLLAGLELLQTARRDSRDWLVKQLGGQAEK*
JGIcombinedJ51221_100596714	3300003505	Forest Soil	MIMHRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK*
JGIcombinedJ51221_103992261	3300003505	Forest Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRD
Ga0062387_1014954691	3300004091	Bog Forest Soil	MDRSAVQKRLAETEEQIASGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSRDWLMKQLDKSYEVK*
Ga0062593_1011290582	3300004114	Soil	MDSAALQQRLAETEDQIANGERQIAHQRKLVAELEGDGREATHAKYLLAGLELLQTARRDSREWLLKQLKA*
Ga0062593_1019154221	3300004114	Soil	MDRSIVQQRLIETEEQIASAEHQIAQQRKVIAELEGNGRSAVHAKYLLAGLELLQAARRDSREALVKAAKALSNSSHRP
Ga0062595_1013118172	3300004479	Soil	MELWGSEGLLVMPNMDRSAIQKRVAKTEEQIALGQRQVVQQQELILKLEAEGHSAAHAKYLLAGLNLLQAARRDSRDKLLKRLDDVE*
Ga0066823_101167001	3300005163	Soil	MDRSVIQQRLAETEERIANGQNQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLKGV*
Ga0070660_1017148682	3300005339	Corn Rhizosphere	MVSHCAGAVSRLVTEPVDRSALRQRLAETEEQIGNGERQIAHQRKLVAELDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA*
Ga0070675_1018412132	3300005354	Miscanthus Rhizosphere	MQMDSAALQQRLAETEDQIANGERQIAHQRKLVAELEGDGREATHAKYLLAGLELLQTARRDSREWLLKQLKA*
Ga0070671_1002876774	3300005355	Switchgrass Rhizosphere	VAEDRGAVSRLVTEPVDRSAVRQRLAETEEQIGNGERQIAHQRKLVAELDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA*
Ga0070709_107351481	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDPAALQKRLAETEDQIANGERQIAQQRKLVAELDSNGQPAAHAKYLLAGLELLQTARRDSREWLLKQLNLS*
Ga0070713_1013434772	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQMAPATLQQRLAETEDQIANGERQIAHQRKLVAELERDRREATHAKYLLAGLELLQTARRDSQEWLLKQLKA*
Ga0070711_1003491942	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDPAALQKRLAETEGQIANGERQIAQQRKLVAELEEDGREAAHAKYLLAGLELLQTARRDSREWLLKRLRA*
Ga0070711_1019648101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNRSAIQKRLAETEERIALGQRQVAQQQELILKLEADGQSAAHAKYLLAGLNLLQAARRDSRDKPLKRLDNVE*
Ga0070717_101333821	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSDLQQRLGQTEAQIQNGEQQIAEQRKLVAELDAEGREAAHAKYLLAGLELLQSARRDSREWLLKQLRALDQGNPLPPLGGR*
Ga0075023_1005111701	3300006041	Watersheds	MDRSFIQQRLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK*
Ga0066652_1017727522	3300006046	Soil	MKMDRSAIQKRLAETEERIALGQRQVAQQQELIVKLKADGQSAAHAKYLLAGLELLQAARRDSRDKLLKRPGQSKTN*
Ga0075017_1010491972	3300006059	Watersheds	LDAAPDLRRHSFVMIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK*
Ga0075017_1015432742	3300006059	Watersheds	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAQLETDGSSASHAKYLLAGLELLETARRDSRDWLLKQLGGQAEK*
Ga0075030_1008159921	3300006162	Watersheds	MTSAAFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK*
Ga0070712_1015319762	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDPAALQKRLAETEDQIANGERQIAHQRKLVAELERDGREAAHAKYLLAGLELLQTARRDSREWLLKQLKA*
Ga0070765_1003202792	3300006176	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLVKQLGGQAEK*
Ga0070765_1003883952	3300006176	Soil	MNRAVLQRRLAEAEEQIASGLRHIARQREVIAELESNGHPTGHAKYLLAGLELLQAARRDSRA*
Ga0070765_1015267362	3300006176	Soil	MDRPVIQQRLAETEEQIANGENQIAQQRRLIAELETNGSPDSHAKYLLAGLELLQAARRDSRDWLLKQLK*
Ga0075021_101510134	3300006354	Watersheds	MIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK*
Ga0074059_115292952	3300006578	Soil	MDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLKGV*
Ga0079221_111712852	3300006804	Agricultural Soil	MDRSDLQQRLAETEEQIANGERQIAHQRKLISELDADGREAGHAKYLLAGLELLLSARRDSREWLLKQLKA*
Ga0075425_1022831631	3300006854	Populus Rhizosphere	MDRSDLQQRLAETEEQIANGERQIAHQRKLISELDADGREAGHAKYLLAGLELLQSARRDSREWLLKQLANVDHAD*
Ga0073928_100327209	3300006893	Iron-Sulfur Acid Spring	MKMDPAALQQRLAETEDQIANGERQIAEQRKLVVELDGNGQPAAHAKYLLAGLELLQAARRDSRKWLLKQLKALGYVTPFVD*
Ga0073928_101192251	3300006893	Iron-Sulfur Acid Spring	LKQWTALFIQKRLAETEEQIANGENQIAQQRRLIAQLETDGSSASHAKYLLARLELLQTARRDSREWLLKQLK*
Ga0073928_102420422	3300006893	Iron-Sulfur Acid Spring	MDRSTIQKRLAETEERIALGQHQVAQQQELIVKLEAEGQSAAHAKYLLAGLNLLQAARRDNRDKLLKRLDNVK*
Ga0074063_131450322	3300006953	Soil	MDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLGGQAEK*
Ga0102924_10628942	3300007982	Iron-Sulfur Acid Spring	MDRSVIQQRLAEIEEQIANGEKQIAQQRKLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK*
Ga0102924_12647232	3300007982	Iron-Sulfur Acid Spring	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAGLETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLGGQTEK*
Ga0102924_13880261	3300007982	Iron-Sulfur Acid Spring	PLKQWTALFIQKRLAETEEQIANGENQIAQQRRLIAQLETDGSSASHAKYLLARLELLQTARRDSREWLLKQLK*
Ga0105245_125741511	3300009098	Miscanthus Rhizosphere	LAETEEQIGNGERQIAHQRKLVAELDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA*
Ga0105243_115242413	3300009148	Miscanthus Rhizosphere	MDRSIVQQRLIETEEQIASAEHQIAQQRKVIAELEGNGHSADHAKYLLAGLELLQAARRDSRDALVKQLQP*
Ga0116222_11686052	3300009521	Peatlands Soil	MIMDRSVIQERLAETEERFANGGNQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV*
Ga0116218_10953562	3300009522	Peatlands Soil	MTSAAFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV*
Ga0116218_11744721	3300009522	Peatlands Soil	MDRSAVQKRLAETEEQIATGQHQVAQQRELIVELEANGRSAAHAKYLLAELELPQAARRDSRDWLMKQLDKVAR*
Ga0116216_101040441	3300009698	Peatlands Soil	AFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV*
Ga0116217_102699391	3300009700	Peatlands Soil	MDRSAVQKRLAETEQQIASGQHQVVQQRELIVELEANGRSAAHAKYLLAELELPQAARRDSRDWLMKQLDKVTG*
Ga0105239_110307912	3300010375	Corn Rhizosphere	MQMDSAALQQRLAETEDQIANGERQIAHQRELVAELEGDGREATHAKYLLAGLELLQTARRDSREWLLKQLKA*
Ga0105239_115109653	3300010375	Corn Rhizosphere	LAETEEQIGNGERQIAHQRKLVAELDPDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA*
Ga0136449_1002279636	3300010379	Peatlands Soil	MDRSAVQKRLAETEEQIATGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSRDWLMKQLDKVAR*
Ga0134121_125754342	3300010401	Terrestrial Soil	MPNTDRFTILQKRLAETEERIALGQRQVAQQQEVIVKLEADGQSAAHAKYLLAGLELLQAARRDTRDKLLKRLDEGKVK*
Ga0164300_109463841	3300012951	Soil	MDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQTEK*
Ga0164298_103382992	3300012955	Soil	MDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK*
Ga0164303_105186641	3300012957	Soil	MDRSAVQKRLAETEEQIATGQHQVAQQRELIVELEANGRSAAYAKYLLAGLELLQTARRDSRDWLMKQLDKSYEVK*
Ga0164303_107132883	3300012957	Soil	MDRSVIQQRLAETDEQIANGVNQIAQQRRLVAELETNGSPASHAKYLLAGLQLLQTARRDSRDWLLKQLK*
Ga0164299_110654291	3300012958	Soil	MDRSVIQQRLAETDEQIANGVNQIAQQRRLVAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLNQLK*
Ga0164301_108901492	3300012960	Soil	MDRSVIQERLAETEEQIANGENQIAQQRRLIAELETDGSSASHAKYLLAGLELLQTARRDSRDWLLKQLK*
Ga0164301_117395951	3300012960	Soil	MDRSVIQRRLAETEDQITNGENQIAQQRRLIAELETNGSPASHAKYLLDGLELLQTARRDSRDWLQKQLGGQTEK*
Ga0164302_100917683	3300012961	Soil	MDRSVIQERLDETEEQNANGENQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLLKQLKGV*
Ga0164309_116126201	3300012984	Soil	MDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK*
Ga0164305_117327801	3300012989	Soil	RLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQTEK*
Ga0164305_119701161	3300012989	Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAELETDGSSASHAKYLLAGLELLQTARRDSRDWLLNQLK*
Ga0181532_107341801	3300014164	Bog	MDRSAVQKRLAETEEQIATGQHQVAQQRELIVELEANGRSAAHAKYLLAELELPQAARRDSRDWLMKQLDKVTG*
Ga0163163_112083353	3300014325	Switchgrass Rhizosphere	MDRSIVQQRLIETEEQIASAEHQIAQQRKVIAELEGNGRSAVHAKYLLAGLELLQAARRDSREALVKAAKALSN
Ga0163163_120246421	3300014325	Switchgrass Rhizosphere	MPNTDRFAIQKRLAETEERIALGQRQVAQQQELIVNLEADGQPAAHAKYLLAGLELLQAARRDSRDKLLKRLDEVK*
Ga0132258_115372952	3300015371	Arabidopsis Rhizosphere	LAETEDQIANGERQIAERRKVVVELDGNGQPAAHAKYLLAGLELLQTARRDSREWLLKQLEA*
Ga0132258_118711652	3300015371	Arabidopsis Rhizosphere	MDRSALQRRLAETEEQIANGARQIAQQRKLIAELEGDGREATHAKYLLAGLELLQSARRDSREWLLKQLKG*
Ga0132258_132315161	3300015371	Arabidopsis Rhizosphere	MPNTDRFAIQKRLAETEERIALGQRQVAQQQELIVKLEADGQSAAHAKYLLAGLELLQAARQDSRDKLLKRLDEVK*
Ga0132257_1030495511	3300015373	Arabidopsis Rhizosphere	MFRRRLAETEEQIGNGERQIAHQRKLVAKLDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKG*
Ga0132257_1036601932	3300015373	Arabidopsis Rhizosphere	MQMDPAALQQRLAETEDQIANGERQIAEQRKLVVELDGKGQPTAHAKYLLAGLELLQAARQDSRAWLLKQLSLS*
Ga0182036_105016661	3300016270	Soil	MDRSAIQKRLAETEERIASGQSQVAQQRELIAELDGNGCSTTHAKYLLAGLELLQAARRDSRDWLLKQLDKVTS
Ga0182037_114526021	3300016404	Soil	RLQQMDRSAIQKRLAETEERIASGQSQVAQQRELIAELDGNGCSTTHAKYLLAGLELLQAARRDSRDWLLKQLDKVTS
Ga0182038_116528431	3300016445	Soil	MDPAALQQRLAETNGQIANGERQIAEQRKLIIELDGNGQPAAHAKYLLAGLELLQAARRDSREWLRNS
Ga0187816_103124982	3300017995	Freshwater Sediment	MDRSVIQQRLAEIEEQIANGENQIAQQRRLIAELETNGGPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV
Ga0184586_1126682	3300019194	Soil	MDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLKGV
Ga0173482_101253963	3300019361	Soil	MDRSAIQERLAKTEEQIALGQRQVAQQQELILKLEADGQSAAHAKYLLAGLQLLQAARRDSRDKLLKRLDEAK
Ga0210407_100132277	3300020579	Soil	MDRSVIQQRLAETEERIANGQNQIAQQRRLIAELESNGRISHAKYLLAGLELLQTARRDSRDWLLKRLGGQTEK
Ga0210407_100618673	3300020579	Soil	MIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0210407_102000783	3300020579	Soil	MDRSALQERLAEAEERISSMEHQIAQQRRLVADLESNGSSASHAKYLLAGLELLQAARRDSRDWLLKQLSLA
Ga0210407_104238601	3300020579	Soil	MDHSAIQKRLTETEERIALGQRQVAQQQELIVKLEADGQSAAHAKYLLAGLELLQAARRDGRDKLLKRLEKVK
Ga0210407_105912502	3300020579	Soil	MDRSVIQQRLVETEEQIANGQNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWKPTQLGGGY
Ga0210407_109914092	3300020579	Soil	MDRSVILQRLTETEEQIANGENQIAQQRRLIAGLETNGSPASHAKYLLAGLQLLQTARRDSRDWLLKQLAGQTEK
Ga0210403_103981254	3300020580	Soil	MDPAVLQQRLAETEDQIANGERQIAEQRKLVVELDGNGQPAAHAKYLLAGLELLQAARRDSREWLLKQLKA
Ga0210395_110177092	3300020582	Soil	MDRSVIQQRLVETEEQIANGQNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLLKQLGGQAEK
Ga0210401_106158811	3300020583	Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLVAELETNGSSASHAKYLLAGLELLQTARRDSRDWLVKQLGGQAEK
Ga0210404_101508451	3300021088	Soil	MIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRD
Ga0210404_101741243	3300021088	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0210406_1000596218	3300021168	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWKPTQLGGGY
Ga0210406_101628483	3300021168	Soil	MIMHRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQK
Ga0210406_105450033	3300021168	Soil	MTSAAFVRIMDRSIIQERLAETKERIANGESQIAQQRRLIAELETNGSPASHAKYLLAGLKLLQTARRDSRDWLLKRLKSVYRRRFQRR
Ga0210406_107225782	3300021168	Soil	MDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSAASHAKYLLAGLELLQTARRDSRDWLLKQLGGQAEK
Ga0210408_100443961	3300021178	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRD
Ga0210408_103345314	3300021178	Soil	MTSAAFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV
Ga0210408_105581642	3300021178	Soil	MNRAVLQRRLAEAEEQIASGLRHITRQREVIAELESNGHPTGHAKYLLAGLELLQADRRDSRAWLLKQLNKTPGNRTKFLNRIGGDES
Ga0210388_114933182	3300021181	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLLKQLKGV
Ga0210393_103740603	3300021401	Soil	VELGKQCLLAEAMDRSALQQRLAETEEQIANGERQIVQQRKLVAELEDDGREAAHAKYLLAGLELLQSARRDSRKWLLEQLKA
Ga0210393_112944922	3300021401	Soil	MDHSAIQKRLTETEERIALGQRQVAQQQELLVKLEADGQSAAHAKYLLAGLELLQAARRDGRDKLLKRLEKVK
Ga0210393_115102431	3300021401	Soil	MDRSVIQQRLAETEERIANGQNQIAQQRRLIAELESNGRISHAKYLLAGLELLQTARRDSRDWLLKRLGGQTE
Ga0210385_112904312	3300021402	Soil	MDRSVIQQRLVETEEQIANGQNQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0210389_104587072	3300021404	Soil	RWPRAAKAIERAVIQQRLAETDEQIANGENQIAQQRRLIAQLETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV
Ga0210389_105092871	3300021404	Soil	MIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSR
Ga0210387_110202031	3300021405	Soil	MDRSAIQKRLAETEEQIASGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSRDWLLKQLDNMK
Ga0210386_115792432	3300021406	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLLKQLGGQAEK
Ga0210394_104033992	3300021420	Soil	MQMDPAVLQQRLAETEDQIANGERQIAEQRKLVVELDGNGQPAAHAKYLLAGLELLQAARRDSREWLLKQLKA
Ga0210394_109146684	3300021420	Soil	TEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLVKQLGGQAEK
Ga0210384_108128231	3300021432	Soil	MDRSVILQRLTETEEQIANGENQIAQQRRLIAGLETNGSPASHAKYLLAGLQLLQTARRDSRDWLLKQLGGQTEK
Ga0210391_111652952	3300021433	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLVKQLGGQAEK
Ga0210390_105391091	3300021474	Soil	MDRSVIQQRLAETEGQIANGDNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWKPTQLGGG
Ga0210392_103358462	3300021475	Soil	MIMDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0210402_100771364	3300021478	Soil	MQMDPAVLQQRLAETEDQIANGERQIAEQRKLVVELDGNGQPAAQAKYLLAGLELLQAARRDSREWLLKQLKA
Ga0210402_105591382	3300021478	Soil	LLGRARWPRAAKAIERAVIQQRLAETDEQIANGENQIAQQRRLIAQLETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV
Ga0210402_110695292	3300021478	Soil	MDRSAIQKRLAETEEQIASGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSRDWLMKQLDKVAR
Ga0210410_106954672	3300021479	Soil	MDRSVIQQRLVETEEQIANGQNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWKPTQL
Ga0222729_10506301	3300022507	Soil	EAEERISSMEHQIAQQRRLVADLESNGSSASHAKYLLAGLELLQAARRDSRDWLLKQLSL
Ga0242652_10220903	3300022510	Soil	SVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242658_11048361	3300022530	Soil	IQERLAKTEEQIANGENQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242655_100963401	3300022532	Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLVAELETNGSSASHAKYLLAGLELLQTAQRDSRDWLVKQLGGQAEK
Ga0212123_1001606810	3300022557	Iron-Sulfur Acid Spring	MKMDPAALQQRLAETEDQIANGERQIAEQRKLVVELDGNGQPAAHAKYLLAGLELLQAARRDSRKWLLKQLKALGYVTPFVD
Ga0212123_100233123	3300022557	Iron-Sulfur Acid Spring	MDRSVIQQRLAEIEEQIANGEKQIAQQRKLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK
Ga0212123_100814282	3300022557	Iron-Sulfur Acid Spring	MAGAPLKQWTALFIQKRLAETEEQIANGENQIAQQRRLIAQLETDGSSASHAKYLLARLELLQTARRDSREWLLKQLK
Ga0212123_100973003	3300022557	Iron-Sulfur Acid Spring	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAGLETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLGGQTEK
Ga0212123_102201043	3300022557	Iron-Sulfur Acid Spring	MDRSTIQKRLAETEERIALGQHQVAQQQELIVKLEAEGQSAAHAKYLLAGLNLLQAARRDNRDKLLKRLDNVK
Ga0242653_10520433	3300022712	Soil	AETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242675_10442423	3300022718	Soil	RADRRTAKPMDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSAASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242657_10433562	3300022722	Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242665_101504491	3300022724	Soil	APDLRRHSFAMIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0242654_101055711	3300022726	Soil	MIMDRSVIQERLAETEEQITNGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLGGQTEK
Ga0224564_11351881	3300024271	Soil	RLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLKGV
Ga0207657_110719711	3300025919	Corn Rhizosphere	MVSHCAGAVSRLVTEPVDRSALRQRLAETEEQIGNGERQIAHQRKLVAELDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA
Ga0207659_109134182	3300025926	Miscanthus Rhizosphere	MQMDSAALQQRLAETEDQIANGERQIAHQRKLVAELEGDGREATHAKYLLAGLELLQTARRDSREWLLKQLKA
Ga0207644_103158493	3300025931	Switchgrass Rhizosphere	VTEPVDRSAVRQRLAETEEQIGNGERQIAHQRKLVAELDSDGRDAAHAKYLLAGLELLQSARRNSREWLLKQLKA
Ga0208859_10425371	3300027069	Forest Soil	PGEGSRPGGMTSAAFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0208365_10290301	3300027070	Forest Soil	MDRPVIQQRLAETEEQIADGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0208606_1078041	3300027095	Forest Soil	MIMDRSVIQERLAETEGQIANGDNQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0207948_10330682	3300027174	Forest Soil	DRRTAKPMDRSVIQQRLVETEEQIANGQNQIAQQRRLIAELETNGSSASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0209275_101105412	3300027884	Soil	MDRSVIQQRLAETEEQIANGENQIAQQRRLVAELETNGSPDCNAKYLLAGLELLQAARRDSRDWLLKQLK
Ga0209069_102049582	3300027915	Watersheds	MDRSVIQQRLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLGGQADK
Ga0209069_104236541	3300027915	Watersheds	MDRSAVQKRLAETEEQIASGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSHDWLVKQLDKVTR
Ga0308309_103298402	3300028906	Soil	MNRAVLQRRLAEAEEQIASGLRHIARQREVIAELESNGHPTGHAKYLLAGLELLQAARRDSRA
Ga0222749_103930721	3300029636	Soil	MIMDRSVIQERLAETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWPKQLGGQAEK
Ga0310037_103242431	3300030494	Peatlands Soil	AFVMIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLKSV
Ga0307498_102506641	3300031170	Soil	MDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLGARPDRHCGPAFVAR
Ga0310686_1024918902	3300031708	Soil	MIMDRSVIQERLAETEERIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLQKQLGGQAEK
Ga0310686_1041405992	3300031708	Soil	MDRAALQQRLAETEEQIANGERQIVQQRKLVAELEDDGREAAHAKYLLAGLELLQSARRDSRKWLLEQLKA
Ga0310686_1095803512	3300031708	Soil	MDRAVLHQRLAKTEDQIANGLRHIARQREVIAELESNGRPADHAKYLLAGFELLQTARRDSRDWLLEQVSKNTR
Ga0310686_1190081456	3300031708	Soil	MDRSVIQQRLTETEEQIANGENQIAQQRRLIAELETNGSPASHAKYLLAGLELLQTARRDSRDWLLKQLK
Ga0310813_114697232	3300031716	Soil	MDRSALQRRLAETEEQIANGARQIAQQRKLIAELEGDGREATHAKYLLAGLELLQTARRDSREWLLKQLKA
Ga0316051_10102333	3300032119	Soil	GRTMDRSVIQRRLAETEEQIANGEKQIAQQRRLIAELESNKSPASHAKYLLAGLELLQTARRDSRDWLLKQLKGV
Ga0311301_100506663	3300032160	Peatlands Soil	MDRSAVQKRLAETEEQIATGQHQVAQQRELIVELEANGRSAAHAKYLLAGLELLQAARRDSRDWLMKQLDKVAR
Ga0311301_101531198	3300032160	Peatlands Soil	MDRSAVQKRLAETEQQIASGQHQVVQQRELIVELEANGRSAAHAKYLLAELELPQAARRDSRDWLMKQLDKVTG
Ga0307470_111781341	3300032174	Hardwood Forest Soil	MDRSVIQQRLAEIEKQMANGENQIAQQRKLIAELETNGSPASHAKYLLAGLELLQTARRYRRV
Ga0306920_1025145902	3300032261	Soil	RLAESEERIASGQSQVAQQRELIAELDGNGCSTTHAKYLLAGLELLQAARRDSRDWLLKQLDKVTS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences