NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F047823

Metagenome / Metatranscriptome Family F047823

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F047823
Family Type Metagenome / Metatranscriptome
Number of Sequences 149
Average Sequence Length 85 residues
Representative Sequence VIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVVGAVVCS
Number of Associated Samples 134
Number of Associated Scaffolds 149

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.92 %
% of genes near scaffold ends (potentially truncated) 8.72 %
% of genes from short scaffolds (< 2000 bps) 8.05 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (91.275 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.134 % of family members)
Environment Ontology (ENVO) Unclassified
(16.779 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.651 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 66.02%    β-sheet: 0.00%    Coil/Unstructured: 33.98%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 149 Family Scaffolds
PF07681DoxX 2.01
PF02585PIG-L 0.67
PF00291PALP 0.67
PF03435Sacchrp_dh_NADP 0.67
PF08031BBE 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 149 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 2.01
COG4270Uncharacterized membrane proteinFunction unknown [S] 2.01
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.67
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 0.67


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A91.28 %
All OrganismsrootAll Organisms8.72 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005327|Ga0070658_10360625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1245Open in IMG/M
3300005329|Ga0070683_100029428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4972Open in IMG/M
3300006852|Ga0075433_10426946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1169Open in IMG/M
3300010048|Ga0126373_10526514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1228Open in IMG/M
3300014199|Ga0181535_10239686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1098Open in IMG/M
3300017959|Ga0187779_10166177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1367Open in IMG/M
3300018026|Ga0187857_10143486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1138Open in IMG/M
3300020002|Ga0193730_1044794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1280Open in IMG/M
3300021407|Ga0210383_10394014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1194Open in IMG/M
3300024290|Ga0247667_1022735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae1206Open in IMG/M
3300028808|Ga0302228_10099167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1365Open in IMG/M
3300030399|Ga0311353_10315105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1429Open in IMG/M
3300030509|Ga0302183_10069377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1392Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.13%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa12.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.04%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.37%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.70%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.03%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.36%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.01%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.01%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.34%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.34%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.34%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.34%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.34%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.34%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.34%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock1.34%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.34%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.67%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.67%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.67%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.67%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.67%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.67%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012499Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610EnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027505Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300028574Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030509Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030519Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1012216813300001593Forest SoilVIDINQDIASVISGYAISCGAFLVVAGASKLYRSLRAPEEMTAIRRALRMARRQWRLFGLAAGGVEGATGLLVCSGTYPLPGGAGLAGL
JGIcombinedJ26739_10096181913300002245Forest SoilVIDINQDIASVISGYAISCGAFLVVAGASKLYRSLRAPEEMTAIRRALRMARRQWRLFGLAAGGVEGATGLLVCSGTYPLPG
JGIcombinedJ26739_10185387223300002245Forest SoilMESVISGCAIGCGAFLVIAGASKLYRSTRALEEMTAIRRALRMSRRQWRLFGLAAGGVECATGLLVCSGTYPVPGGAGLAGLGAVFCVLLAYVLVK
JGIcombinedJ51221_1021847913300003505Forest SoilMIDIKQVTESVISGCAVSCGAFLVVAGASKLYRSTRALEDMTAVRRALRMPRRQWRLFWLASGGVECVTGLLVCSGAY
Ga0062385_1048517923300004080Bog Forest SoilVIDINQIIESVISGCAVSCGAVLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLATGGVECVTGVLVCSGAYPVLAGA
Ga0062385_1124909613300004080Bog Forest SoilVIGINQVIESVISGCAISCGAVLVVAGASKLYRGMRALDDMTAIRRALRMPRRPWRLTGLAAGGVECVTGVLVCSGAYPVL
Ga0062387_10085192213300004091Bog Forest SoilLLPRQIEALESSWVIVINQAIESIIAGFAVSCGAVLVVAGAGKLYRGIRGLEDMTAIRRALRMPRRQWRLFGLAAGSAEGVTGVVVCSGAYPVLGGASLAAL
Ga0070658_1036062533300005327Corn RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRVLRMPRRQWRLFGLAAGGTECLVGALVC
Ga0070683_10002942813300005329Corn RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASG
Ga0066693_1026532813300005566SoilVIGISQVIGSAVAGCAASCGAVLIVAGASKLYRGIRGFGDMTAIRRALRMPQRQWRLFGLAAGGTECLVGALVCSGAYPVLGGVSLAALGAVFCAVL
Ga0081540_122804823300005983Tabebuia Heterophylla RhizosphereVIGINQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLAAGGTE
Ga0066790_1005922013300005995SoilVISISQVITSVIAGFAVSCGATLAVAGAGKLYRGARGLDDATAIRRALRLPRHRWRHLTWAAGGVECA
Ga0075029_10037010023300006052WatershedsVIDINQIIESVISGCAVSCGAVLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLATGGVECVTGV
Ga0075017_10035517023300006059WatershedsVIGINQVIGSVISGCAVSCGAVIALAGASKLYRGIRGLDDMTAIRRVLRMPRRQWRLFGLTTGGTECVVGAVVCSGAHPALGGASLTALGAVFCALLAYVLVKRVPGGCGCI
Ga0075030_10126591723300006162WatershedsVIDINQVIASIISGCAFSCGAVLVVAGASKLYRGIRNHDDMTAIRRALRMPRRQWRLTGLAAGGVECVTGVLVCSGAYPVLG
Ga0070712_10010854613300006175Corn, Switchgrass And Miscanthus RhizosphereVIGINQVIGSVISGCAVSCGAVIGVAGASKLYRGITGLDDMTAIRRALRMPRRQWRLFGLTTGG
Ga0075433_1042694633300006852Populus RhizosphereVIGINQFIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAVRRALRMPRRQWRLFGLAAGGTECLVGALLCSG
Ga0075425_10147168513300006854Populus RhizosphereVIGINQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPQRQWRLFGLAAGGTECLAGALVCSGAYPVLGGASLVALGAVFCAVLAYVVFAHV
Ga0116128_113661713300009518PeatlandVISINQVTASVIAGCAVSCGATLAVAGAGKLYRAARGLDDTTAIRRALRMPRHRWRHLTWAAGGVECAAGVLVCSRAYPAVGGASMAVLG
Ga0116221_100069813300009523Peatlands SoilVIDINQIIESVISGCAVSCGAVLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVEGVTGVPVCSGAYPVLGGPGMAALG
Ga0116224_1020292313300009683Peatlands SoilVIDINQVIESVLSGGAASCGAVLVVAGVSKLYRDIRALDDMTAIRRALRMPRRQWRLTGLAAGGVECVTGVLV
Ga0116217_1096131923300009700Peatlands SoilVIDINQIIESVISGCAVSCGAVLVAAGASKLYRGVRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGLLVC
Ga0126373_1052651413300010048Tropical Forest SoilVIGINQVIGSVIAGCAVSCGAVLAVAGAGKLYRGTRGLDDMTAIRRALRMPRRQWRLFGLTAGGVECVTGAIVCCGA
Ga0127503_1011617313300010154SoilVIGINQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMARRQWRLFGLAAGGTE
Ga0074046_1014719233300010339Bog Forest SoilVIDINQVIESVISGCAVSCGAVLVVAGASKLYRGVRNLDDMTAIRRVLRMPRRQWRLFGLAAGGVECVTGVLVCS
Ga0074044_1077559323300010343Bog Forest SoilVIDINQIIESIISGCAISCGAVLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGVLVCCGAY
Ga0126370_1240715013300010358Tropical Forest SoilVIGINQVIGSVISGCAVSCGAVLAVAGTSKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGVECVTGAIVCCGAYPVLGGASLAALGAVFCALLAYILVRQVP
Ga0126378_1208653413300010361Tropical Forest SoilVIGINQVIGSVISGCAASCGAVLVVAGASKLYRGVRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVVGAAMCSGAYPVLSGASLAALGAV
Ga0126377_1302693313300010362Tropical Forest SoilVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMSRRQWRLFGLTAGGTECVVGAVVCSGLYPVLSGASLAALG
Ga0126381_10057361013300010376Tropical Forest SoilVIGINQVIGSVISGCTVSCGAVLAVAGASKLYRGIRGFDDMTAIRRALRMPRRRWRLFVLTAGGTECVVGAAV*
Ga0126381_10494697513300010376Tropical Forest SoilVIGINQVIGSVISGSAVSCGAVLVVAGASKLYRGLRGLDDMTAIRRALRMSRRQWRLFVLTAGGTECVVGAAVCSGEYPVLGGASLAALGAVFCTLLAY
Ga0136449_10250550813300010379Peatlands SoilLLPRQIEALESSRVIGINQIIESVIAGCAASCGAVLVVAGASNLYRGVRGLEDMTAIRRALPMPRRHWRLFGLAAGSAESVTGVEVC
Ga0136449_10358580823300010379Peatlands SoilVIDINQIIDSVISGCAVSCGAVLVVAGASKLYRGIRDLDEETAVRRALRMPRRQWRLTGLATGGVECVTGVLVCSGAYPVL
Ga0136449_10410005513300010379Peatlands SoilVIDINQIIESVISGCAVSCGAVLVAAGASKLYRGVRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGLLVCSGAYP
Ga0134126_1221174313300010396Terrestrial SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDVTAIRRALRMPRRQWRLFGLAAGGTECLVGALVCGGAYPVLGGISLAALGAVFCAVLAYVVFAHV
Ga0126383_1235411113300010398Tropical Forest SoilVIGINQVIGSVISGSAVSCGAVLVVAGASKLYRGLRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVVGAVVCSGAYPVLSGASLAALAAVFCALLAYVLVMQ
Ga0138514_10007068123300011003SoilVIGINQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPPRQWRLFGLAAGGTVNQN
Ga0138514_10015371613300011003SoilVIGINQVMGSVISGCAVSCGAVLAMAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFSLTAGGVECVVGAVVCSGAYPVLGGASLAALGAVFCALLAYVLVRQ
Ga0137382_1030235913300012200Vadose Zone SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGTRGFDDMTAIRRALRMPQRRWRLFGLIAGGVECVAGAAVCSGAYPVLGG
Ga0137385_1044104413300012359Vadose Zone SoilVIGINQIIGSVISGCAVSCGAVLAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGMECVVGAVVCSGAYPVLGGASL
Ga0157350_100098613300012499Unplanted SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLTAGGMECVAGAVVCSGEYPVLGGASLAALGA
Ga0157351_100118333300012501Unplanted SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLIAGTTECAVGALVCSGEYPVLSG
Ga0126369_1068422013300012971Tropical Forest SoilVIGINQVIGSVISGCAVSCGAVLVVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGAVVCSGAFPVLSGASLAALGAVFCALLAYVLVKQVPGGCGC
Ga0134110_1055902213300012975Grasslands SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFGDMTAIRRALRMPQRQWRLFGLAAGGTECLVGALVCSGAYPVLGGVSLAALGAVFCAVLAYVVFAHVPGSCGCI
Ga0181535_1023968613300014199BogVISISQVTASVIAGCAVSCGATLAVAGAGKLYRAARGLDDTTAIRRALRMPRHRWRHLTWAAGGVEC
Ga0181535_1073482023300014199BogVIDINQIIESVISGCAVSCGAVLVVAGASKLYRGIRNLDHMTAVRRALRMPRRQWRLTGLAAGGVECVTGVLV
Ga0182041_1148563123300016294SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDDMTAIRRAMRMSRRQWRLFGLTAGGTECVVGAVVCSGAYPVL
Ga0182038_1073861413300016445SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDDVTAIRRALRMPRRQWRLLGLTAGGMECVVGAVVCSGAYPVLSGASLASLGAVFCALLGYVLVKQVP
Ga0187818_1054239213300017823Freshwater SedimentVIDINQIIESVISGCAVSCGAILVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGVLVCSGAYPV
Ga0187807_110302313300017926Freshwater SedimentVININQVVASVTAGCAVSCGVTLAVAGAGKLYRSARGLDDDTAIRRALRIPRHRWRHLTWAAGGVECAVGV
Ga0187808_1006587033300017942Freshwater SedimentVIDINQIIESVISGCAVSCGAILVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGVLVCSGAYPVLGG
Ga0187779_1016617733300017959Tropical PeatlandVIEINQVIGSVISGCAVSCGAVLVVAGASKLYRGVRGLEDVTAIRRALRMPRREWRLLALAAGGVE
Ga0187778_1028939023300017961Tropical PeatlandVIEINQVIGSVISGCAVSCGAVLVVAGASKLYRAARALDDMTAVRRVLRMPRRQWRLFGLAAGGAECVTGTVVCSGAYPVLGAASLATLGAVFCALLAYMLVKQVPGGCGCIRWR
Ga0187778_1074612223300017961Tropical PeatlandVIDNSQVMESIISGCAVSCGAALLAAGASKVYRGTRDLEDMTAIRRALRMPRRRWRLTGLAAGGVECVTGVLVCSGAYPVLGGASMAALGAVFCALLAYVL
Ga0187873_112235723300018013PeatlandVISISQLIASVIAGCAVSCGATLAVAGAGKLYRAARGLDDTTAIRRALRMPRRQWRLFGLAAGGVECVTGLLVCSGAYPVLGGAGMTGLGAVFSVLLGYVL
Ga0187857_1014348613300018026PeatlandVISINQVTASVIAGCAVSCGATLAVAGAGKLYRAARGLDDTTAIRRALRMPRHRWRHLTWAAGGVECAAGVLVC
Ga0187863_1011714933300018034PeatlandVIDINQVTESVISGCAISCGAFLVVAGANKVYQSTRTLEDMTAIRRALRMPRRRWRLFWLAAGGVEC
Ga0187871_1007472733300018042PeatlandVIDINQVIGSVISGCATSCGAFLVVAGASKLYRSIRSLEEMTAIRRALRMPRRQWRLFGLAAGGVECLTGLLVCSGASPVLG
Ga0187858_1047338613300018057PeatlandVIDINQVIGSVISGCATSCGAFLVVAGASKLYRSIRSLEEMTAIRRALRMPRRQWRLFGLAAGGVECLTGLLVCSGASPVLGGAGMAGLGAVFCVL
Ga0187765_1043026413300018060Tropical PeatlandVIGINQVIASIVSGCAVSCGAVLVVAGTSKLYRGTRGLDDMTAIRRVLRMPRRQWRLFGLTAGAAECVTGAVVCS
Ga0187772_1079711913300018085Tropical PeatlandVIGINQVTESIISGCAVSCGAVLAVAGSGKLYRGVRGLDDMTAIRRALRMPRRQWRLAGLAAGGAEVVTGTVVCSGAYPVLGAASLVTLGAVLCALLAYMLVKQVPG
Ga0066669_1129791613300018482Grasslands SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFGDMTAVRRALRMPRRQWRLFGLTAGGMECVVGAVVCSGAYPVLGGASLAALGAVFCALLAYVLVKQVPGGCGCIGWRA
Ga0173482_1035748123300019361SoilVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGATECLVGALECSGAYPV
Ga0193729_127522623300019887SoilVIGINQVIGSVISGCAVSCGAVIALAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTTGGTECVVGAVVCSGAHPVLSGAS
Ga0193730_104479413300020002SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGTRGFDDMSAIRRALRMPQRRWRLFGLIAGGVECVAGAVVCSGAYPVLSGVSLAALGAVFCAVLAYVVFA
Ga0206349_130973613300020075Corn, Switchgrass And Miscanthus RhizosphereVIGISQVIGSAIAGCAASCGPVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGGTECL
Ga0213881_1014842823300021374Exposed RockVIGINQVIGSVISGCAVSCGAVLAVAGASKLYHGIRGLDDMTAIGRVLRMPRRQWRLFGLATGGTECMVGAVLCG
Ga0213881_1017937413300021374Exposed RockVIGINQVIASVISGCAVSCGAVLAVAGASKLYRGIRGLDDMTAIGRVLRMPRRQWRLFGLATGGTECMVGAVLCG
Ga0213874_1033068513300021377Plant RootsVIGINQVIESIISGCAVSCGAVLVVAGASKLYRAVRGLDDMTAVRRALRMPRRQWRLFGLTAGAAECVTGAVVCSGAYPVLGAVSLATLGAVFCALLAYMLVKQVP
Ga0210397_1077851323300021403SoilVIGINQVIESVIAGCVASCGALLVVAGVSKLYRGVRGLEDMTAIRRALPMPRRHWRLLGLAAGSAESV
Ga0210387_1023635813300021405SoilVIGINQVIGSVISGCAVSCGAVIAVAGASKLYRGITGLDDMTAIRRALRMPRRQWRLFGLTTGGI
Ga0210383_1039401413300021407SoilVIDINQVIASIISGCAVSCGALLVVAGVSKLYRGIRDLDDMTAIRRALRMPRRQWRLTGLAAGGVECVTGVLVCS
Ga0210384_1052653813300021432SoilVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTTGGTECVVGALVCSGA
Ga0210398_1038045733300021477SoilVIDINQVIASIISGCAVSCGALLVVAGVSKLYRGIRDLDDMTAIRRALRMPRRQWRLTGLAAGGVECVT
Ga0210410_1014503433300021479SoilVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVVGAVVCS
Ga0126371_1234989113300021560Tropical Forest SoilVIGINQVIGSVISGSAVSCGAVLVVAGASKLYRGLRGLDDMTAIRRALRMSRRQWRLFGLIAGGTECVVGAVVCSGAYPVLSGASLAALGAVFCAL
Ga0247677_101252713300024245SoilVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGGTECLVGALACSGAYPVLSGASLAALGAVFCAVLGYVVFAHVPGSCGCIR
Ga0247667_102273513300024290SoilVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGATECLVGA
Ga0207692_1075959313300025898Corn, Switchgrass And Miscanthus RhizosphereVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVV
Ga0207671_1007830113300025914Corn RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGGTECLVGAL
Ga0207687_1024760133300025927Miscanthus RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGATECL
Ga0207691_1016719633300025940Miscanthus RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGTSKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLAAGGTECLAISQCRLGILG
Ga0207711_1035028433300025941Switchgrass RhizosphereVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLASGGTEC
Ga0209218_114091313300027505Forest SoilLLPRQIEALESSRVIGINQVIESVIAGCVASCGALLVVAGVSKLYRGVRGLEDMTAIRRALPMPRRHWRLLGLAAGSAESVTGLVVCSGAY
Ga0209116_102747123300027590Forest SoilMESVISGCAIGCGAFLVIAGASKLYRSTRALEEMTAIRRALRMSRRQWRLFGLAAGGVECATGLLVCSGTYPVPGGAGLAGLGAVFCVLLAYVLVKHIPGGCGCIRWRTAP
Ga0208565_112392213300027662Peatlands SoilVIDINQVIESVLSGGAASCGAVLVVAGASKLYRGIRALDDMSAIRRALRMPRRQWRLTGLAAGGVECVTGVLVCSGAYPVLGGAGMAALGAVFCLLLAYV
Ga0209530_110297313300027692Forest SoilVIDINQDIASVISGYAISCGAFLVVAGASKLYRSLRAPEEMTAIRRALRMARRQWRLFGLAAGGVEGATGLLVCSGTYPLP
Ga0209073_1008825813300027765Agricultural SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMRRRQWRLFGLAAGGTECLVGALVCSGAYPVLSGA
Ga0209448_1001925633300027783Bog Forest SoilVIDINQIIESVISGCAVSCGAVLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLATGG
Ga0302153_1031725313300028574BogVISISQVIASVIAGCAVSCGATLAVAGAAKLYHGARGLDATTAIRRALRMPRHRWRHLTWAAGGVECAAGVLVC
Ga0302225_1043638023300028780PalsaVIDINQVMESVISGCAISCGAVLVVAGASKLHRSIRTPEDMTAIRRALRMPRRQWRLLGLAAGGVE
Ga0302223_1003556933300028781PalsaVIDINQVTESVISGCAISCGAFLAVAGASKLCRSIRALDDMTAIRRALRMPRRQWRLFGLAAGGVECVTGLMVCSGTYPVPGGAGLTGLGAVFCVLLAYV
Ga0307323_1001319933300028787SoilVIGIIQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGSAAGGTECLVG
Ga0302232_1043106723300028789PalsaMESVISGCAISCGAFLVVAGASKLYRSTWALEEMTAIRRALRMPRRQWRLFGLAAGGVECAT
Ga0302222_1020453023300028798PalsaVIDINQVLESVISGCAISCGAFLVVAGASKLYRSIRALEDMTAIRRALRMPRRQWRLFGLAAGGVECVTGLLVCSGAYPVLGGAGMTGLGAVFSVLLTYVLVKQIPGG
Ga0302221_1017433113300028806PalsaMSGMSLAAGSVISGGAASGGAVLAMAGAGKLYRGIVGREDMTAIRRALQMPPRPWRLFGLAAGGTECVAGAVVCSGRFPVAGGAAL
Ga0302228_1009916713300028808PalsaVIDINQVTESVISGFAISCGAFLAVAGASKLCRSIRALDDMTAIRRALRMPRRQWRLFGL
Ga0307312_1000681813300028828SoilVIGISQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGPAAGGTECLVGALACSGAYP
Ga0302229_1019823123300028879PalsaVIDINQVIGSVISGCATSCGAFLVVAGASKLYRSIRSLEEMTAIRRALRMPRRQWRLFGLAAGGVECLTGLLVCSGASPVLGGVGMA
Ga0302229_1053497123300028879PalsaVIEINQVIEPVISGCAISCGAFLVVTGASKLYRSARAVEEMTAIRRALRMPRRQWRLFGLAAGGVECVTGLMVCS
Ga0311368_1068126623300029882PalsaVIDINQVTESVISGCAVSCGAFLVVAGASKLYRSTRALDDMTAIRRALRMPRRQWRLFWLTAGGVECATGLLVCSGAYPVLGGAG
Ga0311340_1047848613300029943PalsaVIDINQVTESVISGFAISCGAFLAVAGASKLCRSIRALDDMTAIRRALRMPRRQWRLFGLAAGGVECATGLLVCGG
Ga0311339_1068577423300029999PalsaVIGINQVIAPAVVGCAVSCGAVLFVAGASKLYRCGRGLDEMSAIRRALRIPQRPWRLFLLAAGVAECATGAIVCSGAYPVVGGATLAALGAVFCALL
Ga0302177_1011791033300030053PalsaVIDINQVTESVISGCAISCGAFLAVAGASKLYRSVRALDDMTAIRRALRMPRRQWRLFGLTAGGVECVTGLLVCGGAYPLLGGAGLAGLGAG
Ga0302181_1019694913300030056PalsaVIDINQVLESVISGCAISCGAFLVVAGASKLYRGIRALEDMTAIRRALRMPRRRWRLFGLAAGGVECVTGLLVCSGAYPVLGGASLTGLGAAFSVL
Ga0302176_1038668013300030057PalsaVIDINQDIESVISGCAVSCGAFLVVAGASKLYRSMRAPEEMTAIRRALRMPRRQWRLFGLAAGG
Ga0311353_1031510533300030399PalsaVIDINQVTESVISGCAISCGAFLAVAGASKLYRSVRALDDMTAIRRALRMPRRQWRLFGLTAGGVECVTGLLVCGGAYPLLGGAGLAG
Ga0311353_1161256313300030399PalsaVIDINQVIGSVISGCATSCGAFLVVAGASKLYRSIRSLEEMTAIRRALRMPRRQWRLFGLAAGGVECLTGLLVCSGASPVLGGVGMAGLGAVFCVLLAYVL
Ga0311370_1174740713300030503PalsaVIDINQDIESVISGCAVSCGAFLVVAGASKLYRSMRAPEEMTAIRRALRMPRRQWRLFGLAAGGVECTTGLLVCSGTYPVPGGAGLAGLGAVFCVLLAYMLVKRVPGGCGCIRWR
Ga0302183_1006937733300030509PalsaVIDINQVTESVISGFAISCGAFLAVAGASKLCRSIRALDDMTAIRRALRMPRRQWRLFGLAAGGVECATGLLVCGGAYPVLGGASLAGLGAVFCVLLGYVLVRQIPGGCGCIR
Ga0302193_1019762913300030519BogVISISQVIASVIAGCAVSCGATLAVAGAAKLYHGARGLDATTAIRRALRMPRHRWRHLTWAAGGVECA
Ga0311357_1098688623300030524PalsaVIEINQVIEPVISGCAISCGAFLVVTGASKLYRSARAVEEMTAIRRALRMPRRQWRLFGLAAGGVEC
Ga0265460_1244878413300030740SoilVIDINQVIASIISGCAVSCGALLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVT
Ga0265459_1331064313300030741SoilVIDINQVIASIISGCAVSCGALLVVAGASKLYRGIRDLDDMTAVRRALRMPRRQWRLTGLAAGGVECVTGVLVCSGAYPVLG
Ga0265753_108416113300030862SoilVIGINQVMGSVISGCAVSCGVVIAMAGASKLYRGIRGLDDMTAIRRVLRLPRRQWRLFGLTTGGTECVVGAVVCSGVHPVLSGAGLTALGAVF
Ga0318538_1047627613300031546SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYP
Ga0318573_1029432713300031564SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFCAV
Ga0318555_1009067033300031640SoilVIGINQVIGSFISGCAVSCGAVLAVAGASKLYRGTRGLDDMTAIRRALRMSRRRWRLLILAAG
Ga0306918_1060507013300031744SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGA
Ga0318494_1075757123300031751SoilVIGINQVIASVVSGCAVSCGAVLVVAGASKLYRAVRSFDEMTAIRRALRMPRRQWRLFGLTGGVAECVTGAVVCSGAYPVLGAASLATLGAVFCALLAYVFVQQIPGGCGCIR
Ga0318537_1008236223300031763SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFCAVLAYVLVRQVPGGCGCI
Ga0318554_1058756413300031765SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALV
Ga0318546_1059777313300031771SoilVIGINQVIASIVSGCAVSCGAVLVVAGASKLYRGIRGLDDMTAIRRALRMPRRRWRLFGLTAGAAECVTGAVVCSRAYPVLGGASLAAAGAVFCALLAYVLVKQVP
Ga0318566_1016396513300031779SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPV
Ga0318566_1040915023300031779SoilVIGINQVIASIVSGCAVSCGAVLVVAGASKLYRGIRGLDDMTAIRRALRMPRRRWRLFGLTAGAAECVTGA
Ga0318547_1081618523300031781SoilVIGINQVIASIISGCAVSCGAVLGVAGASKLYRGMRGLDDMTAIRRALRMPRRQWRLFGLTAGSAECVTC
Ga0318517_1012327023300031835SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFCAVLAY
Ga0318527_1005418133300031859SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFCAVLAYVLVRQVPG
Ga0318536_1040146323300031893SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFC
Ga0306921_1122067213300031912SoilVIGINQVIGSFISGCAVSCGAVLAVAGASKLYRGTRGLDDMTAIRRALRMSRRRWRLLILAAAGTEC
Ga0307479_1133371523300031962Hardwood Forest SoilVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRALRMPRRQWRLFGLTAGGTECVVGAVVCSGAHPVLSGASLTVL
Ga0318569_1028697613300032010SoilVIGINQVIGSFISGCAVSCGAVLAVAGASKLYRGTRGLDDMTAIRRALRMSRRRWRLLILAAGGTECVVGAAVCSGEYPLLGGASLAALGGVFCTL
Ga0318504_1012063113300032063SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAAL
Ga0318524_1015224423300032067SoilVIGINQVIGSFISGCAVSCGAVLAVAGASKLYRGTRGLDDMTAIRRALRMSRRRWRLLILAAGGTECVVGAAVCSGEYPLLGGASLAALGGVFCTLLAYVLVKQVPGGRGCI
Ga0318553_1006533613300032068SoilVIGINQVIGSFISGCAVSCGAVLAVAGASKLYRGTRGLDDMTAIRRALRMSRRRWRLLILAAAGTECVVGAAVCSGEYPLLGGASLA
Ga0306924_1261151713300032076SoilVIGISQVIGSVLSGCAVSCGAFLAVAGASKLYRGLRGLDDVTAIQRALRMPRRQWRLFGLAAGATE
Ga0318525_1029250723300032089SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSGAYPVLGGASLAALGAVFCAVLAYVLVRQVPGG
Ga0318518_1002430513300032090SoilVIGINQVIGSFISGCAVSCGAVLGVAGASKLYRGMRGLDDMTAIRRALRMPRRQWRLFGLTAGSAECVTCAMVCSGAYPLLGGASLAAVGAVFCALLGY
Ga0318540_1061430413300032094SoilVIGINQIIGSVVSGCAVSCGAFVAVAGASKLYRGMRGLDEMTAIRRALRMPRRQWRLFGLTAGGTECVVGALVCSG
Ga0311301_1143267323300032160Peatlands SoilVIGINQIIESVIAGCAASCGAVLVVAGASNLYRGVRGPEDMTAFRRAFPMPGGLWRRLGRAAGRP
Ga0335085_1024560233300032770SoilVIGINQVIGSVISGCAASCGAVLVVAGASKLYRGVRGLDDMTAIRRALRMSRRQWRLFGLIAGGTECVVGAVVCSGAYPVLSGASLAALGAVFCALLAYVLVKQVP
Ga0335085_1159784013300032770SoilVIGINQVIGSVISGCAVSCGAVVAVAGASKLYRGIRGLDDMTAIRRVLRMSRRQWRLFGLIAGGTECAVGAVVCSG
Ga0335085_1162938423300032770SoilVIGINQAMGSVISGCAVSCGAVLAVAGVSKLYRGARGLDDRTAIRRALRMPPRQWRLFGLAAGAAECVTGAVVCSGAYP
Ga0335078_1270609313300032805SoilVIGINQVIGSAIAGCAASCGAVLIVAGASKLYRGIRGFDEMTAIRRALRMPRRPWRLFGLAAGGTECLVGALVCSGAYPVLGGVSLVALGAVFCAVLGY
Ga0335080_1033741533300032828SoilVIGINQVTGSVIAGCAASCGAVLIVAGASKLYRGIRGFDDMTAIRRALRMPRRQWRLFGLAAGSTECL
Ga0335080_1127726613300032828SoilVIGINQVIGSVISGCAASCGAVLVVAGAGKLYRGVRGLDDMTAIGRALRMPRRQWRLFGLIAGATECVVGAVVCSGAYPVLSGASL
Ga0335081_1015962713300032892SoilVIGIKQVIESIISGCAVSCGAVLVVAGTSKLYRGMRGLDDMTAIRQALRLRRRQWRLFGLAAGASECVTGAVVCSGAYRVLGGASLATLGAVFCAVLAYALFKQVPGS
Ga0370515_0026990_3_2183300034163Untreated Peat SoilMIDINQVIGSVISGCATSCGAFLVVAGASKLYRSIRSLEEMTAIRRALRMPRRQWRLFGLAAGGVECLTGLL
Ga0370514_101406_3_3053300034199Untreated Peat SoilMIDINQVLESVISGCAISCGAFLVVAGASKLYLSIRALEDMTAIRRALRMPRRQWRLFGLAAGGVECVTGLLVCSGAYPVLGGAGMTGLGAVFSVLLAYVL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.