Metagenome / Metatranscriptome Family F047857

Basic Information
Family ID	F047857
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	77 residues
Representative Sequence	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLIFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Number of Associated Samples	114
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.37 %
% of genes near scaffold ends (potentially truncated)	25.50 %
% of genes from short scaffolds (< 2000 bps)	77.18 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (72.483 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.805 % of family members)
Environment Ontology (ENVO)	Unclassified (32.215 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.101 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.65% β-sheet: 0.00% Coil/Unstructured: 41.35%
Feature Viewer

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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00535	Glycos_transf_2	35.57
PF00365	PFK	26.17
PF13641	Glyco_tranf_2_3	6.71
PF00854	PTR2	3.36
PF00248	Aldo_ket_red	2.01
PF13561	adh_short_C2	2.01
PF00106	adh_short	0.67
PF03572	Peptidase_S41	0.67
PF00830	Ribosomal_L28	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	26.17
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	3.36
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.67
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.48 %
Unclassified	root	N/A	27.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.48 %
Unclassified	root	N/A	27.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.48 %
Unclassified	root	N/A	27.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.19 %
Unclassified	root	N/A	27.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.52 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	5.37 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.37 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.68 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.34 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.37 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	1.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.34 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.52 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	5.37 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.68 %
Chromatiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	1.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.34 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02HOAHM	Not Available	513	Open in IMG/M
3300001593\|JGI12635J15846_10056784	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300001593\|JGI12635J15846_10190382	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300001593\|JGI12635J15846_10642035	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300001593\|JGI12635J15846_10864023	Not Available	517	Open in IMG/M
3300002245\|JGIcombinedJ26739_100476886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300002245\|JGIcombinedJ26739_100592065	Not Available	986	Open in IMG/M
3300002245\|JGIcombinedJ26739_101180251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	654	Open in IMG/M
3300002245\|JGIcombinedJ26739_101433549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	584	Open in IMG/M
3300003218\|JGI26339J46600_10139393	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300003219\|JGI26341J46601_10022801	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300003219\|JGI26341J46601_10044379	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300003505\|JGIcombinedJ51221_10001046	All Organisms → cellular organisms → Bacteria	6769	Open in IMG/M
3300004080\|Ga0062385_10640625	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300004082\|Ga0062384_101009047	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300004091\|Ga0062387_100616351	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300004092\|Ga0062389_100308271	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300005332\|Ga0066388_100043945	All Organisms → cellular organisms → Bacteria	4469	Open in IMG/M
3300005434\|Ga0070709_11016962	Not Available	660	Open in IMG/M
3300005434\|Ga0070709_11123802	Not Available	629	Open in IMG/M
3300005437\|Ga0070710_10773468	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005548\|Ga0070665_100826719	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005549\|Ga0070704_100958389	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005764\|Ga0066903_101657996	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005921\|Ga0070766_10220740	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300006052\|Ga0075029_100286703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300006059\|Ga0075017_100246034	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300006173\|Ga0070716_100900244	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	693	Open in IMG/M
3300006175\|Ga0070712_100123222	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300006176\|Ga0070765_100113154	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300006176\|Ga0070765_100113497	All Organisms → cellular organisms → Bacteria → Proteobacteria	2365	Open in IMG/M
3300006176\|Ga0070765_101955958	Not Available	549	Open in IMG/M
3300006893\|Ga0073928_11150951	Not Available	524	Open in IMG/M
3300009665\|Ga0116135_1140061	Not Available	898	Open in IMG/M
3300009700\|Ga0116217_11012592	Not Available	508	Open in IMG/M
3300010048\|Ga0126373_11569772	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300010154\|Ga0127503_10060021	Not Available	651	Open in IMG/M
3300010154\|Ga0127503_10905075	Not Available	625	Open in IMG/M
3300010339\|Ga0074046_10022601	All Organisms → cellular organisms → Bacteria → Proteobacteria	4383	Open in IMG/M
3300010341\|Ga0074045_10178094	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300010343\|Ga0074044_10007600	All Organisms → cellular organisms → Bacteria	8523	Open in IMG/M
3300010343\|Ga0074044_10108955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1862	Open in IMG/M
3300010343\|Ga0074044_10484816	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	808	Open in IMG/M
3300010366\|Ga0126379_13084913	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300010379\|Ga0136449_100163423	All Organisms → cellular organisms → Bacteria	4329	Open in IMG/M
3300010937\|Ga0137776_1373935	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300011120\|Ga0150983_11029823	Not Available	567	Open in IMG/M
3300011120\|Ga0150983_11723859	Not Available	523	Open in IMG/M
3300011120\|Ga0150983_14713011	Not Available	501	Open in IMG/M
3300011120\|Ga0150983_14779087	Not Available	517	Open in IMG/M
3300011271\|Ga0137393_10839644	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012205\|Ga0137362_11488244	Not Available	564	Open in IMG/M
3300012361\|Ga0137360_11020524	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012362\|Ga0137361_11873150	Not Available	517	Open in IMG/M
3300012582\|Ga0137358_10472602	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012988\|Ga0164306_10526115	Not Available	914	Open in IMG/M
3300013306\|Ga0163162_12158891	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	639	Open in IMG/M
3300014164\|Ga0181532_10027466	All Organisms → cellular organisms → Bacteria	4007	Open in IMG/M
3300014165\|Ga0181523_10128642	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300018037\|Ga0187883_10213005	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	990	Open in IMG/M
3300018038\|Ga0187855_10163896	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300018042\|Ga0187871_10059614	All Organisms → cellular organisms → Bacteria → Proteobacteria	2267	Open in IMG/M
3300020579\|Ga0210407_10063439	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300020579\|Ga0210407_10558767	Not Available	893	Open in IMG/M
3300020580\|Ga0210403_10018282	All Organisms → cellular organisms → Bacteria	5599	Open in IMG/M
3300020581\|Ga0210399_10423362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300020582\|Ga0210395_10226216	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300021046\|Ga0215015_10851036	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300021168\|Ga0210406_10427654	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300021171\|Ga0210405_10351478	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300021171\|Ga0210405_10442972	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300021180\|Ga0210396_10122453	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300021181\|Ga0210388_10198049	Not Available	1758	Open in IMG/M
3300021361\|Ga0213872_10003781	All Organisms → cellular organisms → Bacteria	8256	Open in IMG/M
3300021361\|Ga0213872_10072760	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300021372\|Ga0213877_10077663	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300021372\|Ga0213877_10207372	Not Available	639	Open in IMG/M
3300021377\|Ga0213874_10241937	Not Available	662	Open in IMG/M
3300021384\|Ga0213876_10289296	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300021401\|Ga0210393_10388106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300021402\|Ga0210385_10046766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2874	Open in IMG/M
3300021402\|Ga0210385_10122745	Not Available	1835	Open in IMG/M
3300021403\|Ga0210397_10373354	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300021403\|Ga0210397_10972383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	658	Open in IMG/M
3300021405\|Ga0210387_10497637	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300021420\|Ga0210394_11087045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium	690	Open in IMG/M
3300021444\|Ga0213878_10019222	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300021444\|Ga0213878_10224441	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300021478\|Ga0210402_10027220	All Organisms → cellular organisms → Bacteria → Proteobacteria	4929	Open in IMG/M
3300021478\|Ga0210402_10716487	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300021559\|Ga0210409_10006299	All Organisms → cellular organisms → Bacteria	12367	Open in IMG/M
3300021559\|Ga0210409_10641531	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300021560\|Ga0126371_10158456	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300021953\|Ga0213880_10054911	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300022511\|Ga0242651_1046026	Not Available	529	Open in IMG/M
3300022512\|Ga0242676_1027884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	622	Open in IMG/M
3300022527\|Ga0242664_1051014	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300022529\|Ga0242668_1160956	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	500	Open in IMG/M
3300022557\|Ga0212123_10067092	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300022716\|Ga0242673_1064235	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	646	Open in IMG/M
3300022720\|Ga0242672_1065012	Not Available	647	Open in IMG/M
3300022726\|Ga0242654_10450546	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300025914\|Ga0207671_10202542	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300025915\|Ga0207693_10479775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	971	Open in IMG/M
3300025939\|Ga0207665_10045552	Not Available	2937	Open in IMG/M
3300026872\|Ga0207785_1015559	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300027583\|Ga0209527_1144316	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	528	Open in IMG/M
3300027660\|Ga0209736_1066410	Not Available	1005	Open in IMG/M
3300027667\|Ga0209009_1012572	Not Available	2022	Open in IMG/M
3300027680\|Ga0207826_1015160	All Organisms → cellular organisms → Bacteria → Proteobacteria	2101	Open in IMG/M
3300027703\|Ga0207862_1026326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1742	Open in IMG/M
3300027727\|Ga0209328_10016031	Not Available	2275	Open in IMG/M
3300027727\|Ga0209328_10106984	Not Available	854	Open in IMG/M
3300027812\|Ga0209656_10000692	All Organisms → cellular organisms → Bacteria	21858	Open in IMG/M
3300027812\|Ga0209656_10001638	All Organisms → cellular organisms → Bacteria	14639	Open in IMG/M
3300027812\|Ga0209656_10214080	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300027895\|Ga0209624_10999976	Not Available	542	Open in IMG/M
3300027908\|Ga0209006_10270195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300027908\|Ga0209006_10586453	Not Available	922	Open in IMG/M
3300027908\|Ga0209006_10621231	Not Available	891	Open in IMG/M
3300027915\|Ga0209069_10207305	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300028047\|Ga0209526_10085900	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300028047\|Ga0209526_10135530	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300028780\|Ga0302225_10310277	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300028871\|Ga0302230_10183735	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300028906\|Ga0308309_10054469	All Organisms → cellular organisms → Bacteria → Proteobacteria	2903	Open in IMG/M
3300029943\|Ga0311340_10575398	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300029999\|Ga0311339_10328405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1630	Open in IMG/M
3300030058\|Ga0302179_10023112	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300030503\|Ga0311370_11221229	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300030580\|Ga0311355_11715789	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300030738\|Ga0265462_12523120	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300030740\|Ga0265460_12519457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	548	Open in IMG/M
3300030923\|Ga0138296_1721890	Not Available	585	Open in IMG/M
3300031057\|Ga0170834_111343008	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300031057\|Ga0170834_111746975	Not Available	632	Open in IMG/M
3300031231\|Ga0170824_109622043	Not Available	775	Open in IMG/M
3300031474\|Ga0170818_105376107	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	571	Open in IMG/M
3300031708\|Ga0310686_100319906	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300031708\|Ga0310686_105247521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6165	Open in IMG/M
3300031910\|Ga0306923_11025044	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300032160\|Ga0311301_10846958	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300032160\|Ga0311301_11865640	Not Available	711	Open in IMG/M
3300032515\|Ga0348332_11417454	Not Available	627	Open in IMG/M
3300032756\|Ga0315742_13300551	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300034282\|Ga0370492_0382018	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.30%
Host-Associated	Host-Associated	4.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.52%
Aquatic	Environmental → Aquatic	16.78%
Plants	Host-Associated → Plants	4.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.48%
Freshwater	Environmental → Aquatic → Freshwater	12.08%
Peat	Environmental → Terrestrial → Peat	4.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.68%
Sediment	Environmental → Aquatic → Sediment	2.01%
Roots	Host-Associated → Plants → Roots	1.34%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.27%
Loam	Environmental → Terrestrial → Soil → Loam	28.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.03%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.01%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.34%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.03%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.34%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	16.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.37%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.36%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.01%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.01%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.01%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.34%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.34%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.67%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.67%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_11982020	2170459009	Grass Soil	MEEDRTVMIKMAVCTIAGLLAFYCAVFCTMLDLPIFWRNIWLGFCLTFFVVCLSGVFILCGDLNSEHSKPDDAKPNES
JGI12635J15846_100567842	3300001593	Forest Soil	MQDRIVIKKMVGSALAGLLFFITAMFTTMLDLTIPWRNIWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKPKE*
JGI12635J15846_101903821	3300001593	Forest Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCISFFVVALGAVFILCGDLNSEHSKPEDAKPKEG*
JGI12635J15846_106420351	3300001593	Forest Soil	MVVSTAAGLLFFITAMFTTMLDLSLVWRNIWLGFCVAFFLIAVGGVFVLCGDLNAEHTDPDDAKPNK*
JGI12635J15846_108640231	3300001593	Forest Soil	MEDRTVMKKMAASALAGFLFFITAMFTTMLDLTILWRNIWLGFCVIFFLLALTGVFILCGDLNAEHSIPDDAKPKE*
JGIcombinedJ26739_1004768861	3300002245	Forest Soil	YVLQAPPVDQEGPSSPKNHSNMQDRIVIKKMVGSALAGLLFFITAMFTTMLDLTIPWRNIWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKPKE*
JGIcombinedJ26739_1005920652	3300002245	Forest Soil	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE*
JGIcombinedJ26739_1011802512	3300002245	Forest Soil	MEDRTVLKKMVVSTAAGLLFXITAMFTTMLDLSLVWRNIWLGFCVAFFLIAVGGVFVLCGDLNAEHTXPDDAKPNK*
JGIcombinedJ26739_1014335492	3300002245	Forest Soil	MQDRIVLTKMVGSAVFGLLFFITAMFTTMLDLSPFWRTFWLGFCLAFFLLALAGVFILCGDLNAEHSEPIDETSKQ*
JGI26339J46600_101393932	3300003218	Bog Forest Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDAKPKES*
JGI26341J46601_100228011	3300003219	Bog Forest Soil	LAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFXVTSLIGVFFLCGDLNSEHNPESETPKEH*
JGI26341J46601_100443792	3300003219	Bog Forest Soil	MEDRTVLIKMAISTFAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALAAVFVLCGDLNSEHSKPEDAKPKES*
JGIcombinedJ51221_100010466	3300003505	Forest Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDANPKEG*
Ga0062385_106406252	3300004080	Bog Forest Soil	MQDGIVLKKMVFSALFGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLSLIGVFILCGDLNSEHSEPEDAPPKA*
Ga0062384_1010090472	3300004082	Bog Forest Soil	STMEDRTVLIKMAISTFAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEEAKPKEG*
Ga0062387_1006163512	3300004091	Bog Forest Soil	MQDSIVMKKMVFSALFGFLFYVTAMFTTMLDLSPVWRSIWLGFCLVFFILSLIGVFILCGDLNAEHSEPEDAPPKG*
Ga0062389_1003082712	3300004092	Bog Forest Soil	MQDGIVLKKMVFSALFGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLSLIGVFILCGDLNSEHSEPEDAPPKG*
Ga0066388_1000439452	3300005332	Tropical Forest Soil	MQDRTVMTKIIVCTLAGLLAFDTAMFTTMLDLPIFWRNFWLGLCITFFLVTLWGVFVLCGDLNSEHSQPEDATPKE*
Ga0070709_110169621	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQDSIVMKKMVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLGFCLVFFVVSLIGVFILCGDLNSEHSEPEDAPPKG*
Ga0070709_111238022	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRTVIIKMAICTVAGLLAFYCAVFCTMLDLPIYWRNIWLGFCISFFVVTLGGVFILCGDLNSEHSKPEDAKPTES*
Ga0070710_107734681	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLIFFVLALAGVFILCGDLNSEHSEREDTKPKE*
Ga0070665_1008267192	3300005548	Switchgrass Rhizosphere	MQDRIVLVKMAASAAAGLLFAVTAVFTTMLDLTNFWRNFWLGLCIIFFLSALAGVFVLCGDLNSEHSEPEDAKPN*
Ga0070704_1009583891	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTKMAASALAGLLLFITAMFTTMLDLTILWRNIWLGFCLIFFVLALAGVFILCGDLNSEHSEREDTKPKE*
Ga0066903_1016579962	3300005764	Tropical Forest Soil	MQDRTVMTKIIVATLAGLLAFDTAMFTTMLDLPIFWRNLWLGFCIAFFLVSLGAVFVLCGDLNSEHSQPEDATPKE*
Ga0070766_102207402	3300005921	Soil	MTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPED
Ga0075029_1002867032	3300006052	Watersheds	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALAAVFVLCGDLNSEHSKPEDAKPKES*
Ga0075017_1002460342	3300006059	Watersheds	MEDRTVLIKMAISTFAGLLFFDFAMFTTMLDLPIFWRNIWLGFCITFFVVALAAVFVLCGDLNSEHSKPEDAKPKES*
Ga0070716_1009002442	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLIFFVLALAGVFILCGDLNSEHSEREDTKPKE*
Ga0070712_1001232222	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPVVQKANFEHQKSFTMEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE*
Ga0070765_1001131542	3300006176	Soil	MQDSIVMKKMVFSALFGFLFYVTAMFTTMLDLSPVWRSIWLGFCLVFFILSLIGVFILCGDLNSEHSEPEDAPPKG*
Ga0070765_1001134971	3300006176	Soil	NSKAVIVTVNRRSFRKAQFLAPGHRLSMEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV*
Ga0070765_1019559581	3300006176	Soil	MEDRTVLKKMVVSTAAGLLFFITAMFTTMLDLSLVWRNIWLGICVAFFLIAVGGVFVLCGDLNAEHTDPDDAKPNK*
Ga0073928_111509512	3300006893	Iron-Sulfur Acid Spring	MEDRTVLTKMVISTLAGLLFFVFSVFCTILDLPIFWRNVWLGFCITCFVVALAGVFALCGDLNSEHSKPEDAKPKES*
Ga0073928_112285541	3300006893	Iron-Sulfur Acid Spring	MVVSTAAGLLFFITAMFTTMLDLSLVWRNIWLGICVAFFLIAVGGVFVLCGDLNAEHTD
Ga0116135_11400611	3300009665	Peatland	MQDRVVMMKMVVSALAGFLAYVMAMFTTMLDLSILWRNIWLGFCLSFFVISLAGVFYLCGDLNSDHTSAESETPKEH*
Ga0116217_110125921	3300009700	Peatlands Soil	NMGAMAISTLAGLLFFDFAIFATMLDLPIFWRNVWLGFCITFFVVALAGVFVLCGDLNSEHSKPEDAKTKES*
Ga0126373_115697721	3300010048	Tropical Forest Soil	TMQDRTVIMKIIVATLAGLLAFDTAMFTTMLDLPIFWRNFWLGLCITFFLVTLWGVFVLCGDLNSEHSQPEDATPKE*
Ga0127503_100600212	3300010154	Soil	RPNFLPGYRLSMEDQNVMKKMVGSALAGLLFFITAMFTTMLDLTVLWRNIWLGFCLTFFVLALAGVFILCGDLNSEHSQPDDEKPKE*
Ga0127503_109050752	3300010154	Soil	MEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFILCGDLNSEHSEPDDEKPKE*
Ga0074046_100226015	3300010339	Bog Forest Soil	MQDRVVMIKMVVSALAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFFVTSLIGVFFLCGDLNSEHNPESETPKEH*
Ga0074045_101780942	3300010341	Bog Forest Soil	MKMVVSALAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFFVTSVIGVFFLCGDLNSEHNPESETPKEP*
Ga0074044_100076003	3300010343	Bog Forest Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALAAVFILCGDLNSEHSKPEDTKPKES*
Ga0074044_101089551	3300010343	Bog Forest Soil	ALAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFFVTSVIGVFFLCGDLNSEHNPESETPKEP*
Ga0074044_104848162	3300010343	Bog Forest Soil	MEDRVVMIKMVVSTLAGLLAFITAMFTTMLDLSILWRNIWLGFCLVFFVIALGGVFYLCGDLNSDHSVPEEQNPKEQ*
Ga0126379_130849132	3300010366	Tropical Forest Soil	TLAGLLAFDTAMFTTMLDLPIFWRNFWLGLCITFFLVTLWGVFVLCGDLNSEHSQPEDATPKE*
Ga0136449_1001634233	3300010379	Peatlands Soil	MEDRTVIKKMAISALSGLLFYVTAMFTTMLDLTIFWRNIWLGFCLAFFLVALGGVFVLCGDLNSEHSEPDDAKPNE*
Ga0137776_13739351	3300010937	Sediment	MQDRNVIIKMAVATLAGLLAYITAIFTTVLDLSILWRNIWLGFCLVFFVIALSAVFHLCGDLNSDHSVPDEQKPKEQ*
Ga0150983_110298232	3300011120	Forest Soil	LAISNSRNHSPMEDRNVLKKMAGSALAGLLFFVTAVFTTMLDLTLFWRNVWLGFCIVFFVLALAGVFILCGDLNSEHSEPDDAKPKE*
Ga0150983_117238592	3300011120	Forest Soil	MEDGTVLTKMAISTLAGLLFFVFAVFCTMLDLPIFWRNLWLGFCITCFVVALAGVFAVCGDLNSEHSKPEDAKPKES*
Ga0150983_147130111	3300011120	Forest Soil	PAQVVFDSRGDSTMEDRTVLIKMGISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDANPKEG*
Ga0150983_147790872	3300011120	Forest Soil	SFRKAQFLAPGHRLSMEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV*
Ga0137393_108396442	3300011271	Vadose Zone Soil	MEDRTVLIKMAISTLAGLLFFDFAVFTTMLDLPIFWRNIWLGFCITFFVVAVAGVFVLCGDLNSEHSKPEDAKPKES*
Ga0137362_114882441	3300012205	Vadose Zone Soil	MEDRTVLIKMAISTVAGLLFFDFAVFTTMLDLPIFWRNVWLGFCITFFVVALAGVFILCGDLNSEHSKPEDAKPKES*
Ga0137360_110205242	3300012361	Vadose Zone Soil	MEDGTVLTKMAISTLAGLLFFVFAVFCTILDLPIFWRNVWLGFCITCFVVALAGVFAVCGDLNSEHSKPEDAKPKES*
Ga0137361_118731502	3300012362	Vadose Zone Soil	VQKANFEHQKSLTMEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFLLALAGVFILCGDLNSEHSEPEDAKPKE*
Ga0137358_104726021	3300012582	Vadose Zone Soil	MEDHTVLIKMAISTLAGLLFFVCAVFATMLDLTIFWRNVWLGLCITFFVAALAGVFILCGDLNSEHSKPEDAKPKES*
Ga0164302_105084122	3300012961	Soil	LLFAVTAVFTTMLDLTNFWRNFWLGLCIIFFLSALAGVFVLCGDLNSEHSEPEDAKPN*
Ga0164306_105261151	3300012988	Soil	AGLLAFYCAVFCTMLDLPIYWRNIWLGFCISFFVVTLGGVFILCGDLNSEHSKPEDAKPTES*
Ga0163162_121588911	3300013306	Switchgrass Rhizosphere	MQDRIVLVKMAASAAAGLLFAVTAVFTTMLDLTNFWRNFWLGLCIIFFLAALAGVFVLCGDLNSEHSEPEDAKPN*
Ga0181532_100274663	3300014164	Bog	MQDRVVITKMVVSALAGFLAYVMAMFTTMLDLSILWRNVWLGFCLAFFLIALIGVFYLCGDLNSDHNAPGPENPEEH*
Ga0181523_101286422	3300014165	Bog	MVVSALAGFLAYVMAMFTTMLDLSILWRNVWLGFCLAFFLIALIGVFYLCGDLNSDHNAPGPENPEEH*
Ga0187883_102130052	3300018037	Peatland	DRVVMMKMVVSALAGFLAYVMAMFTTMLDLSILWRNIWLGFCLSFFVISLAGVFYLCGDLNSDHTSAESETPKEH
Ga0187855_101638962	3300018038	Peatland	MQDRVVMMKMVVSALAGFLAYVMAMFTTMLDLSILWRNIWLGFCLSFFVISLAGVFYLCGDLNSDHTSAESETPKEH
Ga0187871_100596143	3300018042	Peatland	MQDRVVMMKMVVSALAGFLAYVMAMFTTMLDLSILWRNIWLGFCLSFFAISLAGVFYLCGDLNSDHTSAESETPKEH
Ga0210407_100634392	3300020579	Soil	MEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0210407_105587672	3300020579	Soil	MEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFILCGDLNSEHSEPDDEKPKE
Ga0210403_100182824	3300020580	Soil	MEDRTVLIKMGISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDANPKEG
Ga0210399_104233622	3300020581	Soil	KAVIVTVNRRSFRKAQFLAPGHRLSMEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0210395_102262162	3300020582	Soil	MQDSIVLKKMVFSALFGLLFFVTAMFTTMLDLSFVWRNIWLGFCVVFFVLSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0215015_108510363	3300021046	Soil	MEDRTVLIKMAISTLAGLLFFDFAVFTTMLDLPIFWRNIWLGFCITFFVVAVAGVFVLCGDLNSEHSKPEDAKPKES
Ga0210406_104276542	3300021168	Soil	MQDSIVLKKMVFSTVFGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0210405_103514782	3300021171	Soil	MQDRIVIKKMVGSALAGLLFFITAMFTTMLDLTIPWRNIWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKPKE
Ga0210405_104429722	3300021171	Soil	MTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0210396_101224532	3300021180	Soil	MVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLVFCVVFFVASLIGVFILCGDLNSEHSEPEDAPPKG
Ga0210388_101980491	3300021181	Soil	MQDSIVLKKMVFSTVFGLLFFVTAMFTTMLDLSFVWRNIWLGFCVVFFVLSLIGVFILCGDLNSEHSEPE
Ga0213872_100037817	3300021361	Rhizosphere	MQDRTVITKIIVATFAGLLAFDTAMFTTMLDLPIFWRNLWLGFCIAFFLVTLGAVFVLCGDLNSEHSTPEDATPKE
Ga0213872_100727602	3300021361	Rhizosphere	MRDRTVMLKMVVCTLAGLLAFDSAMFTTMLDLPIFWRNLWLVVCIAFFLVTLSGVFVLCGDLNAEHSKPEDATPKEQ
Ga0213877_100776632	3300021372	Bulk Soil	MQDRTVITKIVVCTIAGVLAFDSAMFTTMLDLPIFWRNLWLGVCIAFFLITLGGVFVLCGDLNSEHSKPEDATPKEQ
Ga0213877_102073721	3300021372	Bulk Soil	MRDRTVMLKMVVCTLAGLLAFDSAMFTTMLDLPIFWRNLWLVVCIAFFLVTLSGVFVLCGDLNAEHSKPEDATPKEP
Ga0213874_102419371	3300021377	Plant Roots	VLAPESLNMEDRTVFIKMVGSALAGLLFFLTAMFTTMLDLTTLWRTVWLGFCLAFFLLALAGVFILCGDLNAEHSEPDDAKPNE
Ga0213876_102892962	3300021384	Plant Roots	MEDRTVFIKMVGSALAGLLFFLTAMFTTMLDLTTLWRTVWLGFCLAFFLLALAGVFILCGDLNAEHSEPDDAKPNE
Ga0210393_103881061	3300021401	Soil	MQDSIVMKKMVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLGFCLVFFVVSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0210385_100467663	3300021402	Soil	MVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLVFCVVFFVASLIGVFILCGDLNSEHSEPEDAPPKE
Ga0210385_101227452	3300021402	Soil	MEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDE
Ga0210397_103733542	3300021403	Soil	MQDSIVLKKMVFSALFGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLAVAGVFILCGDLNSEHSEPEDAPPKG
Ga0210397_109723832	3300021403	Soil	MQDSIVIKKMVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLVFCVVFFVASLIGVFILCGDLNSEHSEPEDAPPKE
Ga0210387_104976372	3300021405	Soil	MQDSIVLKKMVFSTVFGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLAVAGVFILCGDLNSEHSEPEDAPPKG
Ga0210394_110870451	3300021420	Soil	MEDRTVITKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0213878_100192222	3300021444	Bulk Soil	MQDRTVIMKIIVATFAGLLAFDTAMFTTMLDLPIFWRNLWLGFCIAFFLVTLGAVFVLCGDLNSEHSQPEDATPKE
Ga0213878_102244412	3300021444	Bulk Soil	MQDRTVILKMVVCTLAGLLAFDSAMFTTMLDLPIFWRNLWLVVCIAFFLVTLSGVFVLCGDLNAEHSKPEDATPKEQ
Ga0210402_100272208	3300021478	Soil	AQFLAPGHRLSMEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0210402_107164872	3300021478	Soil	MEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVAFFVLSLAGVFILCGDLNSEHSEPDDEKPKE
Ga0210409_100062996	3300021559	Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDANPKEG
Ga0210409_106415312	3300021559	Soil	MTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFLLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0126371_101584562	3300021560	Tropical Forest Soil	MQDRTVMTKIIVATLAGLLAFDTAMFTTMLDLPIFWRNLWLGFCIAFFLVSLGAVFVLCGDLNSEHSQPEDATPKE
Ga0213880_100549112	3300021953	Exposed Rock	MEDRTVFIKMVGSALAGLLFFLTAMFTTMLDLTTLWRTVWLGFCLAFFLLALAGVFILCGDLNAEHSEP
Ga0242651_10460262	3300022511	Soil	GSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFILCGDLNSEHSEPDDEKPKV
Ga0242676_10278842	3300022512	Soil	MQDSIVMKKMVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLVFCVVFFVASLIGVFILCGDLNSEHSEPEDAPPKE
Ga0242664_10510141	3300022527	Soil	KAQFLARTSFTMEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFILCGDLNSEHSEPDDEKPKE
Ga0242668_11609562	3300022529	Soil	MVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0212123_100670921	3300022557	Iron-Sulfur Acid Spring	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCISFFVVALGAVFILCGDLNSEHSKPEDAKPKEG
Ga0242673_10642352	3300022716	Soil	MEDQNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0242672_10650121	3300022720	Soil	KAQFLAPGHRLSMEDHNVMKKMVGSALAGLLFFITAMFTTMLDLTVFWRNVWLGFCLIFFVLALAGVFILCGDLNAEHSEPDDEKPKV
Ga0242654_104505462	3300022726	Soil	AQFLARTSFTMEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFILCGDLNSEHSEPDDEKPKE
Ga0207671_102025422	3300025914	Corn Rhizosphere	MQDRIVLVKMAASAAAGLLFAVTAVFTTMLDLTNFWRNFWLGLCIIFFLSALAGVFVLCGDLNSEHSEPEDAKPN
Ga0207693_104797751	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QKANFEHQKSFTMEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0207665_100455522	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLIFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0207785_10155592	3300026872	Tropical Forest Soil	FAGLLFFDFAMFATMLDLPIFWRNVWLGFCITFFVAALAGVFVLCGDLNSEHSKPEDAKPKES
Ga0209527_11443161	3300027583	Forest Soil	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0209736_10664102	3300027660	Forest Soil	MEDRTVLKKMVVSTAAGLLFFITAMFTTMLDLSLVWRNIWLGFCVAFFLIAVGGVFVLCGDLNAEHTEPDDAKPNK
Ga0209009_10125722	3300027667	Forest Soil	MQDRTVMKKMVGSALAGLLFFITAMFTTMLDLTIPWRNIWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKPKE
Ga0207826_10151601	3300027680	Tropical Forest Soil	MEDRTVLFKMAISTFAGLLFFDFAMFATMLDLPIFWRNVWLGFCITFFVAALAGVFVLCGDLNSEHSKPEDAKPKES
Ga0207862_10263262	3300027703	Tropical Forest Soil	MEDRTVLFKMAISTFAGLLFFDFAMFATMLDLPIFWRNVWLGFCITFFVAALAGVFILCGDLNSEHSKPEDAKPKES
Ga0209328_100160313	3300027727	Forest Soil	MEDGTVLTKMAISTLAGLLFFVFAVFCTILDLPIFWRNVWLGFCITCFVVALAGVFAVCGDLNSEHSKPEDAKPKES
Ga0209328_101069841	3300027727	Forest Soil	RILNRVHFLSKSVKIRNHSLMEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0209656_100006928	3300027812	Bog Forest Soil	MQDRVVIMKMVVSALAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFFVTSVIGVFFLCGDLNSEHNPESETPKEP
Ga0209656_1000163812	3300027812	Bog Forest Soil	MQDRVVMIKMVVSALAGFLAFVTAMFTTMLDLSIFWRNIWLGICLVFFVTSLIGVFFLCGDLNSEHNPESETPKEH
Ga0209656_102140802	3300027812	Bog Forest Soil	MEDRTVLIKMAISTFAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALAAVFVLCGDLNSEHSKPEDAKPKES
Ga0209624_109999761	3300027895	Forest Soil	MQDRIVMTKMVGSALAGLLFFITAMFTTMLDLSSFWRNVWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKAKEE
Ga0209006_102701952	3300027908	Forest Soil	MQDRIVLTKMVGSAVFGLLFFITAMFTTMLDLSPFWRTFWLGFCLAFFLLALAGVFILCGDLNAEHSEPIDETSKQ
Ga0209006_105864531	3300027908	Forest Soil	SFRKVQSLAAGIIKSMQDRIVMTKMVGSALAGLLFFITAMFTTMLDLSSFWRNVWLGFCLVFFLLALSGVFILCGDLNSEHSEPDEAKAKEE
Ga0209006_106212312	3300027908	Forest Soil	PRQVPVVVKRPIFGHQKSFTMEDRTVMTKMAASALAGLLFFITAMFTTMLDLTILWRNIWLGFCLLFFVLALAGVFILCGDLNSEHSEPEDAKPKE
Ga0209069_102073052	3300027915	Watersheds	MEDRTVLIKMVISTLAGLLFFDFAVFTTMLDLTIFWRTVWLGFCITFFVVALAGVFALCGDLNSEHSKPEDAEPKES
Ga0209526_100859002	3300028047	Forest Soil	MEDRTVLKKMVVSTAAGLLFFITAMFTTMLDLSLVWRNIWLGFCVAFFLIAVGGVFVLCGDLNAEHTDPDDAKPNK
Ga0209526_101355302	3300028047	Forest Soil	MEDGTVLTKMAISTLAGLLFFVFAVFCTILDLPIFWRNVWLGFCITFFVVALAGVFVLCGDLNSEHSKPEDAKPKES
Ga0302225_103102772	3300028780	Palsa	KMAASALAGFLFFITAMFTTMLDLTILWRNIWLGFCLVFFVVALAGVFILCGDLNSEHSEPDDASPKE
Ga0302230_101837352	3300028871	Palsa	MEDRTVMTKMAASALAGFLFFITAMFTTMLDLTILWRNIWLGFCLVFFVVALAGVFILCGDLNSEHSEPDDASPKE
Ga0308309_100544692	3300028906	Soil	MQDSIVMKKMVFSALFGFLFYVTAMFTTMLDLSPVWRSIWLGFCLVFFILSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0311340_105753982	3300029943	Palsa	MEDRNVMKKMVGSALAGLLFFITAMFTTMLDLTLVWRNIWLGFCIGFFVLALTGVFILCGDLNSEHSEPDEAKPKE
Ga0311339_103284052	3300029999	Palsa	MEDRNVLKKMVGSALAGFLFFITAMFTTMLDLTLVWRNIWLGFCIAFFVLALAGVFILCGDLNSEHNEPDDAKPNE
Ga0302179_100231123	3300030058	Palsa	MTKMAASALAGFLFFITAMFTTMLDLTILWRNIWLGFCLVFFVVALAGVFILCGDLNSEHSEPDDASPKE
Ga0311370_112212291	3300030503	Palsa	MEDRNVLKKMVGSALAGLLFFITAMFTTMLDLTLVWRNIWLGFCIGFIVLALTGVFILCGDLNSEHSEPDE
Ga0311355_117157891	3300030580	Palsa	MEDRTVMTKMAASALAGFLFFITAMFTTMLDLTILWRNIWLGFCLVFFVVALAGVFILCGDLNSEHSEPDDASP
Ga0265462_125231201	3300030738	Soil	FKPAQVVFDSRGDSTMEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDAQPKES
Ga0265460_125194571	3300030740	Soil	GRSGRPISNSRNHSNMEDRTVLTKMAASALAGLLFFVTAVFTTMLDLTVLWRNIWLGFCLVFFVLALAGVFILCGDLNSEHAEPDAAKPKE
Ga0138296_17218901	3300030923	Soil	MEDQNVMKKMVGSALAGLLFFVTAVFTTMLDLTIFWRNFWLGLCVTFFVLSLAGVFVLCGDLNSEHSEPEDEKPKEWRVFGRA
Ga0170834_1113430082	3300031057	Forest Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDAKPKES
Ga0170834_1117469752	3300031057	Forest Soil	MQDSIVMKKMVFSALFGLLFFVTAMFTTMLDLSLVRRNIWLGFCLVFFVVSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0170824_1096220432	3300031231	Forest Soil	MVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLGFCLVFFVVSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0170820_163104372	3300031446	Forest Soil	FGLLFFVTAMFTTMLDLSFVWRNIWLGFCLVFFVLSLIGVFILCGDLNSEHSEPEDAPPK
Ga0170818_1053761071	3300031474	Forest Soil	MQDSIVLKKMVFSALFGLLFFVTAMFTTMLDLSLVWRNIWLGFCLVFFVVSLIGVFILCGDLNSEHSEPEDAPPKG
Ga0310686_1003199062	3300031708	Soil	MEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCITFFVVALGAVFILCGDLNSEHSKPEDAKPKEG
Ga0310686_1052475213	3300031708	Soil	MQDRVVLIKMVVSALAGMLAFITAMFTTMLDLSILWRNIWLGFCLVFFVIALTGVFYLCGDLNSDHTEQEPESPKEH
Ga0306923_110250441	3300031910	Soil	MQDRTVITKIIVCTLAGVLAFDAAMFTTMLDLPIFWRNLWLGVCIALFLITLGGVFVLCGDLNSEHSKPEDATPKKQ
Ga0311301_108469582	3300032160	Peatlands Soil	MAISALSGLLFYVTAMFTTMLDLTIFWRNIWLGFCLAFFLVALGGVFVLCGDLNSEHSEPDDAKPNE
Ga0311301_118656402	3300032160	Peatlands Soil	MEDRTVLIKMAISTLAGLLFFDFAIFATMLDLPIFWRNVWLGFCITFFVVALAGVFVLCGDLNSEHSKPEDAKTKES
Ga0348332_114174542	3300032515	Plant Litter	GEGLKSNPEIHSDMQDRVVLIKMVVSALAGMLAFITAMFTTMLDLSILWRNIWLGFCLVFFVIALTGVFYLCGDLNSDHTEQEPESPKEH
Ga0315742_133005511	3300032756	Forest Soil	LRFVDSRGDSTMEDRTVLIKMAISTLAGLLFFDFAMFTTMLDLPIFWRNVWLGFCISFFVVALGAVFILCGDLNSEHSKPEDAKPKEG
Ga0370492_0382018_15_245	3300034282	Untreated Peat Soil	MEDRTVMTKMAASALAGLLFFITAMFTTMLDLTLVWRNIWLGFCLLFFLLALAGVFILCGDLNSEHSEPDDAKPKD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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