NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F047868

Metagenome / Metatranscriptome Family F047868

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F047868
Family Type Metagenome / Metatranscriptome
Number of Sequences 149
Average Sequence Length 46 residues
Representative Sequence MFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRLIVSSRLMVL
Number of Associated Samples 134
Number of Associated Scaffolds 149

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.31 %
% of genes near scaffold ends (potentially truncated) 16.11 %
% of genes from short scaffolds (< 2000 bps) 84.56 %
Associated GOLD sequencing projects 126
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.289 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.463 % of family members)
Environment Ontology (ENVO) Unclassified
(26.846 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.362 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.62%    β-sheet: 0.00%    Coil/Unstructured: 78.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 149 Family Scaffolds
PF12802MarR_2 48.99
PF01063Aminotran_4 11.41
PF00486Trans_reg_C 8.05
PF00072Response_reg 5.37
PF00672HAMP 0.67
PF01609DDE_Tnp_1 0.67
PF14748P5CR_dimer 0.67
PF10722YbjN 0.67
PF13393tRNA-synt_His 0.67
PF02518HATPase_c 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 149 Family Scaffolds
COG0115Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyaseAmino acid transport and metabolism [E] 22.82
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.67
COG3293TransposaseMobilome: prophages, transposons [X] 0.67
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.67
COG5421TransposaseMobilome: prophages, transposons [X] 0.67
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.67
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.67


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.29 %
UnclassifiedrootN/A6.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918007|ConsensusfromContig131638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens624Open in IMG/M
2170459005|F1BAP7Q02G5CL5All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens508Open in IMG/M
2170459011|GKWS7RC01D9MMCAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens523Open in IMG/M
3300001086|JGI12709J13192_1003630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1838Open in IMG/M
3300001593|JGI12635J15846_10141897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense1660Open in IMG/M
3300001661|JGI12053J15887_10380633All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300001661|JGI12053J15887_10552018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens549Open in IMG/M
3300002245|JGIcombinedJ26739_101842197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense506Open in IMG/M
3300005172|Ga0066683_10135188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1509Open in IMG/M
3300005177|Ga0066690_10347078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense1006Open in IMG/M
3300005179|Ga0066684_10324854All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1026Open in IMG/M
3300005187|Ga0066675_10256384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1251Open in IMG/M
3300005434|Ga0070709_10387281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense1041Open in IMG/M
3300005439|Ga0070711_101172997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens663Open in IMG/M
3300005445|Ga0070708_100575048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1062Open in IMG/M
3300005446|Ga0066686_10637403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.724Open in IMG/M
3300005451|Ga0066681_10065564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00692017Open in IMG/M
3300005471|Ga0070698_101843677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens558Open in IMG/M
3300005554|Ga0066661_10103088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691708Open in IMG/M
3300005555|Ga0066692_10148888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691436Open in IMG/M
3300005556|Ga0066707_10920101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium535Open in IMG/M
3300005574|Ga0066694_10413730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium633Open in IMG/M
3300005899|Ga0075271_10100679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens548Open in IMG/M
3300006047|Ga0075024_100034839All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2070Open in IMG/M
3300006173|Ga0070716_100649587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.800Open in IMG/M
3300006175|Ga0070712_100238564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1447Open in IMG/M
3300006638|Ga0075522_10176505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1094Open in IMG/M
3300006796|Ga0066665_10182056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1618Open in IMG/M
3300006797|Ga0066659_10031352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00693184Open in IMG/M
3300006949|Ga0075528_10118777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens701Open in IMG/M
3300009012|Ga0066710_104253478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium535Open in IMG/M
3300009029|Ga0066793_10331862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.877Open in IMG/M
3300009038|Ga0099829_10163144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1786Open in IMG/M
3300009088|Ga0099830_10259647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens1377Open in IMG/M
3300009088|Ga0099830_10692059Not Available839Open in IMG/M
3300009089|Ga0099828_10422773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1202Open in IMG/M
3300009090|Ga0099827_11081030Not Available696Open in IMG/M
3300009090|Ga0099827_11251875All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium645Open in IMG/M
3300009090|Ga0099827_11416732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium605Open in IMG/M
3300010042|Ga0126314_10105372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1921Open in IMG/M
3300010159|Ga0099796_10273629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens708Open in IMG/M
3300010159|Ga0099796_10565951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium511Open in IMG/M
3300010159|Ga0099796_10586174All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium502Open in IMG/M
3300010325|Ga0134064_10027623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691649Open in IMG/M
3300010326|Ga0134065_10204428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens716Open in IMG/M
3300010337|Ga0134062_10576540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium576Open in IMG/M
3300010364|Ga0134066_10429361All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens511Open in IMG/M
3300011270|Ga0137391_10549492All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens973Open in IMG/M
3300012202|Ga0137363_10960996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens725Open in IMG/M
3300012207|Ga0137381_11047508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium703Open in IMG/M
3300012208|Ga0137376_10616515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria938Open in IMG/M
3300012210|Ga0137378_10457943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1181Open in IMG/M
3300012211|Ga0137377_10845691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.847Open in IMG/M
3300012349|Ga0137387_11044496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium584Open in IMG/M
3300012351|Ga0137386_10093949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2115Open in IMG/M
3300012356|Ga0137371_10374459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1105Open in IMG/M
3300012362|Ga0137361_10484767All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300012582|Ga0137358_10107611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1890Open in IMG/M
3300012685|Ga0137397_10539875All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei868Open in IMG/M
3300012913|Ga0157298_10122396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens739Open in IMG/M
3300012923|Ga0137359_11055557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium696Open in IMG/M
3300012937|Ga0162653_100042183All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium689Open in IMG/M
3300012955|Ga0164298_10530235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei794Open in IMG/M
3300012960|Ga0164301_11248896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens599Open in IMG/M
3300012961|Ga0164302_10214786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1195Open in IMG/M
3300012961|Ga0164302_10229151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1165Open in IMG/M
3300012964|Ga0153916_10115628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2566Open in IMG/M
3300012977|Ga0134087_10040305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.1805Open in IMG/M
3300014490|Ga0182010_10057345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1870Open in IMG/M
3300014502|Ga0182021_11487044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei816Open in IMG/M
3300014502|Ga0182021_11532142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus803Open in IMG/M
3300015077|Ga0173483_10863126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium529Open in IMG/M
3300015194|Ga0167666_1093791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens645Open in IMG/M
3300015242|Ga0137412_11022719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium590Open in IMG/M
3300015358|Ga0134089_10144579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae935Open in IMG/M
3300017657|Ga0134074_1230476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium662Open in IMG/M
3300018027|Ga0184605_10111696Not Available1212Open in IMG/M
3300018028|Ga0184608_10128250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1081Open in IMG/M
3300018061|Ga0184619_10054855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1740Open in IMG/M
3300018433|Ga0066667_10038919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2761Open in IMG/M
3300018468|Ga0066662_10199516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1580Open in IMG/M
3300018469|Ga0190270_11191820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium799Open in IMG/M
3300018482|Ga0066669_10024469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00693451Open in IMG/M
3300019889|Ga0193743_1046249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1925Open in IMG/M
3300020140|Ga0179590_1163493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens610Open in IMG/M
3300021170|Ga0210400_11103349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium642Open in IMG/M
3300021178|Ga0210408_10033608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00694046Open in IMG/M
3300021180|Ga0210396_11264413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium615Open in IMG/M
3300021413|Ga0193750_1012131Not Available2160Open in IMG/M
3300021559|Ga0210409_11212201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium630Open in IMG/M
3300021858|Ga0213852_1194033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1220Open in IMG/M
3300024347|Ga0179591_1025670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2265Open in IMG/M
3300025495|Ga0207932_1021946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1718Open in IMG/M
3300025533|Ga0208584_1025060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1610Open in IMG/M
3300025725|Ga0209638_1024501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2801Open in IMG/M
3300025888|Ga0209540_10106841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1712Open in IMG/M
3300025891|Ga0209585_10099449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1101Open in IMG/M
3300025891|Ga0209585_10210809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus763Open in IMG/M
3300025915|Ga0207693_10353074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1150Open in IMG/M
3300026222|Ga0209862_1049521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium760Open in IMG/M
3300026277|Ga0209350_1046598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1262Open in IMG/M
3300026285|Ga0209438_1048266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1405Open in IMG/M
3300026285|Ga0209438_1135943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens657Open in IMG/M
3300026285|Ga0209438_1146880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei622Open in IMG/M
3300026304|Ga0209240_1036164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1877Open in IMG/M
3300026310|Ga0209239_1032418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2474Open in IMG/M
3300026325|Ga0209152_10143398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei909Open in IMG/M
3300026330|Ga0209473_1095525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1244Open in IMG/M
3300026335|Ga0209804_1266335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium613Open in IMG/M
3300026523|Ga0209808_1055668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1784Open in IMG/M
3300026532|Ga0209160_1194001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense801Open in IMG/M
3300026538|Ga0209056_10258796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1232Open in IMG/M
3300026547|Ga0209156_10156533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691103Open in IMG/M
3300026551|Ga0209648_10033926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4447Open in IMG/M
3300027388|Ga0208995_1031717All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium925Open in IMG/M
3300027562|Ga0209735_1014493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1563Open in IMG/M
3300027645|Ga0209117_1037846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1478Open in IMG/M
3300027663|Ga0208990_1072289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi993Open in IMG/M
3300027678|Ga0209011_1022627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2031Open in IMG/M
3300027846|Ga0209180_10095372All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1691Open in IMG/M
3300027902|Ga0209048_10094170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2318Open in IMG/M
3300027903|Ga0209488_10413940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense996Open in IMG/M
3300027903|Ga0209488_11229056Not Available503Open in IMG/M
3300028573|Ga0265334_10048929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1627Open in IMG/M
3300028771|Ga0307320_10285616Not Available654Open in IMG/M
3300028807|Ga0307305_10016582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3285Open in IMG/M
3300028814|Ga0307302_10347524Not Available731Open in IMG/M
3300028884|Ga0307308_10000689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium12513Open in IMG/M
3300029951|Ga0311371_10235009All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2668Open in IMG/M
3300030294|Ga0311349_10778109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi902Open in IMG/M
3300030975|Ga0099845_1513203Not Available642Open in IMG/M
3300031152|Ga0307501_10017843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1305Open in IMG/M
3300031170|Ga0307498_10091911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei917Open in IMG/M
(restricted) 3300031197|Ga0255310_10176325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens593Open in IMG/M
3300031235|Ga0265330_10055583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1728Open in IMG/M
3300031235|Ga0265330_10090586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1313Open in IMG/M
3300031235|Ga0265330_10195548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens855Open in IMG/M
3300031242|Ga0265329_10071701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1096Open in IMG/M
3300031247|Ga0265340_10004004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei8281Open in IMG/M
3300031344|Ga0265316_10294857All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1182Open in IMG/M
3300031712|Ga0265342_10357160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense760Open in IMG/M
3300031813|Ga0316217_10131036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1105Open in IMG/M
3300032180|Ga0307471_101071342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei972Open in IMG/M
3300034129|Ga0370493_0008954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2878Open in IMG/M
3300034129|Ga0370493_0012485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L103C105A02484Open in IMG/M
3300034195|Ga0370501_0348321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium538Open in IMG/M
3300034819|Ga0373958_0093815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium696Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.07%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.38%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.71%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil5.37%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere5.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.01%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.01%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen2.01%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.34%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.34%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.67%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater0.67%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.67%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.67%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.67%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.67%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.67%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.67%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.67%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.67%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.67%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.67%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.67%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.67%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.67%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459011Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cmEnvironmentalOpen in IMG/M
3300001086Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005899Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006949Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16BEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015194Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025533Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025725Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026222Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030975Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031242Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaGHost-AssociatedOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031813Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoAEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034129Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16EnvironmentalOpen in IMG/M
3300034195Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
A_all_C_021212202140918007SoilMFAEMPLDNRTVEKFAAVVATSGFLRPFETSPREKRLNVSSRLTVL
E41_098922702170459005Grass SoilMFAEMPLDNRTVDKFAALAACSGFLRPLETSLRAKRLIVSSRLMVL
F64_014970802170459011Grass SoilMFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRLIVSSRLMVL
JGI12709J13192_100363023300001086Forest SoilMFADMPLDNRTVGKFAALAATFGFFRPMETSPQTKRPNVSSRLIVL*
JGI12635J15846_1014189713300001593Forest SoilMFAEMPLDNRTVNKFAALAACFGFLRPLETSPRAKRPIVSLRLIVL*
JGI12053J15887_1038063323300001661Forest SoilMFAEMPLDNRTVAKFAALTACLGFLKPSETAPRRKRPIISSRVLIL*
JGI12053J15887_1055201813300001661Forest SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEMSPRAKRPIVSLRLIVL*
JGIcombinedJ26739_10184219713300002245Forest SoilRKSSMFADMPLDNRTVGKFAALAATFGFFRPLETSPQTKRPNVSSRLIVL*
Ga0066683_1013518813300005172SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIVSSRLMVL*
Ga0066690_1034707823300005177SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRAKRLIVSSRLMVL*
Ga0066684_1032485423300005179SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRTKRLIVSSRPMIL*
Ga0066675_1025638433300005187SoilMFAEMPLDNRTVAKFAALTACLGFLKPPETAPRPERPIISSRARVL*
Ga0070709_1038728113300005434Corn, Switchgrass And Miscanthus RhizosphereMFVEMPLDNRTVDKFAAQAAISGFFRPIETSPPTARLNVSSELIVL*
Ga0070711_10117299723300005439Corn, Switchgrass And Miscanthus RhizosphereMFAEMPLDNRTVDKFAALAACLGFLWPLATSPRAKRLIVSPRVMVL*
Ga0070708_10057504823300005445Corn, Switchgrass And Miscanthus RhizosphereMFAEMPLDNRTVDKFAALAACFGFLRPLETPPRAKRLIVSPRLMVL*
Ga0066686_1063740323300005446SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSSRARRPIISPRLMVL*
Ga0066681_1006556423300005451SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIISSRPMVL*
Ga0070698_10184367713300005471Corn, Switchgrass And Miscanthus RhizosphereMFAEMPLDNRTVDKFAALAACFGFLRPLETSPRAKRLIVSSRLLVL*
Ga0066661_1010308813300005554SoilMFAEMPLDNRTVAGFAALAACFGFLRPLETSPPTERPKISSRLIVL*
Ga0066692_1014888833300005555SoilMFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRLIVSSRLMVL*
Ga0066707_1092010113300005556SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRAKRPIISPWLMVL*
Ga0066694_1041373013300005574SoilDNRTVDKFAALAACCGFLRPFETSLRTKRLIVSSRLMVL*
Ga0070762_1081083123300005602SoilDNRTVNKFAAYAAISGLSHPFETLPKTKRSNISS*
Ga0075271_1010067913300005899Rice Paddy SoilMFVEMPLDNRTVDKFAALAAISGFFRPLETSPRTKRLIVSSWMIVL*
Ga0075024_10003483943300006047WatershedsMFAEMPLDNRTVNTFAAMAAISGLFRPPETSPPARRLNVSSGLIVL*
Ga0070716_10064958723300006173Corn, Switchgrass And Miscanthus RhizosphereMFADMPLDNRTVDKFAAPAAPVGLVGPPEISPRPARLKISPRLIVL*
Ga0070712_10023856413300006175Corn, Switchgrass And Miscanthus RhizosphereMFAEMPLDNRTVDKFAALAACLGFLWPLATSPRAIRLIVSPRVMVL*
Ga0075522_1017650523300006638Arctic Peat SoilMFAEMPLDNRTVNKFAALAAISGLFRPPETSPPAKRLNISPGLIVL*
Ga0066665_1018205623300006796SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRAKRLIVSSWLMVL*
Ga0066659_1003135243300006797SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIVSSRPMIL*
Ga0075528_1011877713300006949Arctic Peat SoilMFAEMPLDNRTVNKFATIAAISGLFRPPETSPPAKRLNISSGLIVL*
Ga0066710_10425347823300009012Grasslands SoilMPLDNRTVDKFAALAACCGFLRPFETSPRAKRPIISLRLMVL
Ga0066793_1033186223300009029Prmafrost SoilMFADMPLDNRTVEKFAAVVATSGFLRPFKTSPREKRLNVSSRLTVL*
Ga0099829_1016314433300009038Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRVKRLIVSARLMVL*
Ga0099830_1025964723300009088Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRVKRLIVSSRLMVL*
Ga0099830_1069205923300009088Vadose Zone SoilMFAEVPLDNRTVDKFAALAARFGFLRPLETSPRAKRLIVSSRLMVL*
Ga0099828_1042277323300009089Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPPAKRLIVSSRLMVL*
Ga0099827_1108103023300009090Vadose Zone SoilMFAEMPLDNRTVDKFAARAACFGFLRPLDTSPRAKRLIVSSRLMVL*
Ga0099827_1125187513300009090Vadose Zone SoilMFAEMPLDNRTVDQFAALAAIAGSLRPFEALPQAKRPNVSPWLAVL*
Ga0099827_1141673213300009090Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRAKRLIVSSRLMVL*
Ga0126314_1010537223300010042Serpentine SoilMFAEMPLDNRTVAKFATLTACLGFLKPPETAPRPKRPIISSRAAVL*
Ga0099796_1027362913300010159Vadose Zone SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEALPLKKRPFVSPRLMVL*
Ga0099796_1056595123300010159Vadose Zone SoilMFADMPLDNRTVDQFAALAACLGLLRPLETLPLKKRPFVSLRL
Ga0099796_1058617423300010159Vadose Zone SoilRKSSMFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRLIVSPRVMVL*
Ga0134064_1002762343300010325Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLWAKRLIVSSRPMVL*
Ga0134065_1020442823300010326Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRAKRLIVSLRLMVL*
Ga0134062_1057654013300010337Grasslands SoilMFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRPIISPQMMVL*
Ga0134066_1042936113300010364Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRTKRPIISPQMMVL*
Ga0137391_1054949213300011270Vadose Zone SoilMFAEMPLDNRTVDKFAALAACFGFLRPLETSPRAERLIVSPRLMVL*
Ga0137363_1096099623300012202Vadose Zone SoilMFAEMPLDNRTVDKFAALAARFGFLRPLETSPRAKRLIVSSRLMVL*
Ga0137381_1104750823300012207Vadose Zone SoilMFADMPLDNRTVDQFAALAAIAGSLRPFEALPQAKRPNVSPWLAVL*
Ga0137376_1061651523300012208Vadose Zone SoilMFAEMPLDNRTVAKFATLTACLGFLKPPETRAATKRPIISSRAAVL*
Ga0137378_1045794323300012210Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPLAKRLIVSSWPMVL*
Ga0137377_1084569133300012211Vadose Zone SoilAEMPLDNRTVDKFAARAACFGFLRPLETSPRAKRLIVSSRLMVL*
Ga0137387_1104449623300012349Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRAKRLIVSSWPMVL*
Ga0137386_1009394923300012351Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPLETSPRAKRLIVSSRLVVL*
Ga0137371_1037445933300012356Vadose Zone SoilMFAEMPLDNRTVDQFAALAACFGFLRPLETSPRAKRLIVSSWLMVL*
Ga0137361_1048476713300012362Vadose Zone SoilMFAEMPLDNRTVDKFAALAACSAFLRPLETSPRAKRLIVSSRLMVL*
Ga0137358_1010761123300012582Vadose Zone SoilMFAEMPLDNRTVDKFAALAACSGFLRPLEASPRAKRLIVSSRLMVL*
Ga0137397_1053987523300012685Vadose Zone SoilMFAEMPLDNRTVDKFAALAAYSGFLRPLETSPRAKRLIVSSRLMVL*
Ga0157298_1012239623300012913SoilMFAEMPLDNRTVDKFAALAACLPLATSPRTKRLIVSPRVMVL*
Ga0137359_1105555723300012923Vadose Zone SoilMFAEMPLDNRTVDKFAALAACFGFLRPLETSPRAKRLIVSSWLMVL*
Ga0162653_10004218323300012937SoilMFAEMPLDNRTVDQFAALAAIAGSLRPWEALPQAKRRNVSPWLAVL*
Ga0164298_1053023523300012955SoilMFAEMPLDNRTVDKFAALAACLGFLWPLATSPRAKRLIVSPRAMVL*
Ga0164301_1124889623300012960SoilMFAEMPLDNRTVDKFAALAACLGFLWPVATSPRAKRLIVSPRVMVL*
Ga0164302_1021478613300012961SoilRKSSMFAEMPLDNRTVDKFAALAACLGFLWPLATSPRAKRLIVSPRAMVL*
Ga0164302_1022915133300012961SoilMFAEMPLDNRTVDKFAALAACFGFLRPLGASPRAKRLIVSPRLMVL*
Ga0153916_1011562813300012964Freshwater WetlandsMFAEMPLDNRTVDKFAAVAASFGFLRPFETSPRAKRLNVS
Ga0134087_1004030513300012977Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRTKRLIVSSRLMVL*
Ga0182010_1005734513300014490FenGHAFAEGGSPVLFADMPLDNRTVNTFAALAAISGLFRPPETSPPARRLNVSSGLIVL*
Ga0182021_1148704423300014502FenMFAEMPLDNRTVDKFAAMAAISGLFRPPETSPPARRLNVSSGLIVL*
Ga0182021_1153214223300014502FenMFAEMPLDNRTVNRFAALAATSGFIRPFETSPQTKRLNISSGIGVL*
Ga0173483_1086312613300015077SoilMPLDNRTVDKFAALAACLPLATSPRTKRLIVSPRVMVL*
Ga0167666_109379113300015194Glacier Forefield SoilMFARMPLDNRTVNKFAALAATSGFIRPLATSPRTKRLNVSYGLIVL*
Ga0137412_1102271913300015242Vadose Zone SoilMFADMPLDNRTVDQFAALAACLGLLRPLETLPLKKRPFVSSRLMVL*
Ga0134089_1014457923300015358Grasslands SoilMFAEMPLDNRTVDKFAALAACSGFLRPFETSPRAKRPIISPRLMVL*
Ga0134074_123047613300017657Grasslands SoilRKSSMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIISSRPMVL
Ga0184605_1011169613300018027Groundwater SedimentMFAEMPLDNRTVAKFAALTACLGFLKPPETAPRPKRPIISSRARIL
Ga0184608_1012825013300018028Groundwater SedimentMFAEMPLDNRTVDKFAALAACFGFLRPLEASPRAKRLIVSPRLMVL
Ga0184619_1005485533300018061Groundwater SedimentMFAEMPLDNRTVAKFAALTACLGFLKPPETAPRPKRPIISSRAMVL
Ga0066667_1003891913300018433Grasslands SoilMFAEMPLDNRTVDKFAVLAACCGFLRPFETSLRAKRLIVSSRLIVL
Ga0066662_1019951643300018468Grasslands SoilSSMFAEMPLDNRTVDKFAVLAACCGFLRPFETSLRAKRLIVSSRLIVL
Ga0190270_1119182023300018469SoilMFAEMPLDNRTVKILAAVAAASGFLRPFLTAPRTRRFNISPRLTVL
Ga0066669_1002446933300018482Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRTKRLIVSSRLMVL
Ga0193743_104624923300019889SoilMFAEMPLDNRTVDKFAAIAATSGVLRPSSPQAKRLNISSRLTVL
Ga0179590_116349313300020140Vadose Zone SoilMFAGMPLDNRTVDKFAALAACSGFLRPLEASPRAKRLIVSSRLMVL
Ga0210400_1110334923300021170SoilADMPLDNRTVNTFAALAAISGLFRPPETSFPTRRLNVSSRLIVL
Ga0210408_1003360863300021178SoilMFAEMPLDNRTVDKFAAAAVISGFLWPLESSSRAKRLNVSSRLIVL
Ga0210396_1126441313300021180SoilAEGGSPVLFAEMPLDNRTVNTSAALAAISGFFRPPETSPPAIRLNVSSGLIVL
Ga0193750_101213133300021413SoilMFAEMPLDNRTVDKFAALAACFGFLRPLETSPRAKRLIVSSWLMVL
Ga0210409_1121220123300021559SoilLFADMPLDNRTVNTFAALAAICGLFRPPEPSLPTRRLNVSSRLIVL
Ga0213852_119403333300021858WatershedsMFAEMPLDNRTVNTFAAMAAISGLFRPPETSPPARRLNVSSGLIVL
Ga0179591_102567023300024347Vadose Zone SoilMFAEMPLDNCTVDEFAALAACFGFLGPLETSPRAKRLIVSSQLMVL
Ga0207932_102194623300025495Arctic Peat SoilMFAEMPLDNRTVDKFAALAASFGFLRPLETSPRTKRLNISPRLIVL
Ga0208584_102506023300025533Arctic Peat SoilMFAEMPLDNRTVNKFATIAAISGLFRPPETSPPAKRLNISSGLIVL
Ga0209638_102450133300025725Arctic Peat SoilMFAEMPLDNRTVNKFAALAAISGLFRPPETSPPAKRLNISPGLIVL
Ga0209540_1010684133300025888Arctic Peat SoilMFAEMPLDNRTVNKFAALAAISGLFRPPETSPPAKRLNISSGLIVL
Ga0209585_1009944923300025891Arctic Peat SoilMFAEMPLDNRTVDKFAALAASFGFLRPLETSPRTKRPNISPRLIVL
Ga0209585_1021080923300025891Arctic Peat SoilMFAEMPLDNRTVNKFAALAAISGLFRPPETSPPAKRLNISP
Ga0207693_1035307433300025915Corn, Switchgrass And Miscanthus RhizosphereMFAEMPLDNRTVDKFAALAACLGFLWPLATSPRAIRLIVSPRVMVL
Ga0209862_104952123300026222Permafrost SoilLFAEMPLDNRTVDKFAAVAASVGFLRPLETSPRTKRSNISSRVFVL
Ga0209350_104659813300026277Grasslands SoilSMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIVSSRLMVL
Ga0209438_104826623300026285Grasslands SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEALPLKKRPFVSSRLMVL
Ga0209438_113594323300026285Grasslands SoilMFAEMPLDNRTVDKFAALAACFGVLRPLETSPRAKRLIVSPRMMVL
Ga0209438_114688023300026285Grasslands SoilMFAEMPLDNRTVDKFAALAACSGFLRPLETSPRAKRLIVSLRLMVL
Ga0209240_103616423300026304Grasslands SoilMFAEMPLDNRTVDKFAALAACLGFLRPLEASPWAKRRLIVSSRLMVL
Ga0209239_103241833300026310Grasslands SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRAKRLIVSSRLMVL
Ga0209152_1014339823300026325SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRAKRLIVSSRLIVL
Ga0209473_109552533300026330SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRTKRLIVSSRPMIL
Ga0209804_126633523300026335SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRAKRLIVSSRPMVL
Ga0209808_105566813300026523SoilMFAEMPLDNRTVDKFAVLAACCGFLRPFETSLRAKRLIVSSRPMVL
Ga0209160_119400123300026532SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSLRSKRLIVSSRLMVL
Ga0209056_1025879623300026538SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPRTKRPIISPQMMVL
Ga0209156_1015653333300026547SoilMFAEMPLDNRTVAKFAALTACLGFLKPPETAPRPERPIISSRARVL
Ga0209648_1003392623300026551Grasslands SoilMFAEMPLDNRTVDKFAALAASFGFLRPPSPQAKRLNVSSRLIVL
Ga0208995_103171723300027388Forest SoilMFAEMPLDNCTVDKFAALAANLGLLRPFETSPPTKRPNISSRLIVL
Ga0209735_101449343300027562Forest SoilLFAETPLDNRTVDRFAALAATSGSLRPFEISPRTKRLNVSSRLIVL
Ga0209117_103784633300027645Forest SoilMFAEMPLDNRTVNKFAALAACFGFLRPLETSPRAKRPIVSLRLIVL
Ga0208990_107228923300027663Forest SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEMSPRAKRPIVSLRLIVL
Ga0209011_102262733300027678Forest SoilMFAEMPLDNRTVDKFAALAVCFGFLRPLETLPRTQRLIVSSWLMVL
Ga0209180_1009537233300027846Vadose Zone SoilMFAEMPLDNRTVDKFAALAACCGFLRPFETSPPAKRLIVSSRLMVL
Ga0209048_1009417043300027902Freshwater Lake SedimentMFAEMPLDNRTVDKLAAFAATSGFLRPLETSLPTKRLNVSSWLMVL
Ga0209488_1041394023300027903Vadose Zone SoilMFAEMPLDNRTVDKFAALAACFGFLRPLETSPRAERLIVSPRLMVL
Ga0209488_1122905613300027903Vadose Zone SoilMFADMPLDNRTVDQFAALAACLGLLRPLETLSLTKRPFVSSRLMVL
Ga0265334_1004892943300028573RhizosphereMFAEMPLDNRTVDKFAAQAAISGFFRPPETSPPTARLNVSLELIVL
Ga0307320_1028561623300028771SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEASPRAKLLIVSPRLMVL
Ga0307305_1001658243300028807SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEASPRVKRLIVSPRLMVL
Ga0307302_1034752413300028814SoilMFAEMPLDNRTVDQFAALAAIAGSLRPYEALPQAKRRNVSPWLAVL
Ga0307308_10000689133300028884SoilMFAEMPLDNRTVDKFAALAACFGFLRPLEASPRAKRLIVSSRLMVL
Ga0311371_1023500923300029951PalsaMFAEMPLDNRTVNKFAAYAAISGLSHPFETLPKTKRSNISS
Ga0311349_1077810913300030294FenADMPLDNRTVNPFAALAASLGSLRPLATSPGTKRLNISSRLAVL
Ga0311356_1034232413300030617PalsaMFAEMPLDNRTVNKFAAYAAISGLSHPFETLPKTKRS
Ga0099845_151320313300030975Boreal Forest SoilMFAEMPLDNRTVDKFAAFAASFGLLRPFETSLRTRRLNV
Ga0307501_1001784323300031152SoilMFAEMPLDNRTVAKFATLTACLGFLKPPETAPRPKRPIISSRAAVL
Ga0307498_1009191123300031170SoilMFAEMPLDNRTVDKFAALAACFGFLRPLATSPRAKRLIVSPRVMVL
(restricted) Ga0255310_1017632513300031197Sandy SoilMFAEMPLDNRTVDKFAALAACFGFLWPLETSPRAKRLIVSLRLMVL
Ga0265330_1005558313300031235RhizosphereGHAFAEGRSPVLFADMPLDNRTVNTFAALAAISGLFRPPETSPPAKRLNVSSGLIVL
Ga0265330_1009058623300031235RhizosphereMFAEMPLDNRTVVKFAALAATSGFSGRFETSKPTRRLNVSLRLIVL
Ga0265330_1019554813300031235RhizosphereMFAEMPLDNRTVNKSAVLTATSGFIRPIETSPPAKRLKVSSRLIVL
Ga0265329_1007170123300031242RhizosphereMFAEMPLDNRTVDKFAAMAAISGLFRPPETSPPARRLNVSSGLIVL
Ga0265340_1000400443300031247RhizosphereLFADMPLDNRTVNTFAALAAISGLFRPPETSPPAKRLNVSSGLIVL
Ga0265316_1029485723300031344RhizosphereMFAEMPLDNRTVNKFAAIAAISGLFRPPETSPPAKRLNISSGLIVS
Ga0265342_1035716023300031712RhizosphereRSPVLFADMPLDNRTVNTFAALAAISGLFRPPETSPPAKRLNVSSGLIVL
Ga0316217_1013103623300031813FreshwaterMFAEMPLDNRTVDKFAALAATSGLFKPFPTPPRAKRLNVSPRMILL
Ga0307471_10107134223300032180Hardwood Forest SoilMFAEMPLDNRTVDKFAALAACSGFLRPLEASPRAKRLIVSSRLMVL
Ga0370493_0008954_533_6733300034129Untreated Peat SoilMFADMPLDNRTVNPFAALAASVGFLRPLATSPRTKRLNISSRLTVL
Ga0370493_0012485_1914_20543300034129Untreated Peat SoilMFAETPLDNRTVDKFAGIAARVGFLRPLATSPRAKRLYISSRLIVL
Ga0370501_0348321_20_1603300034195Untreated Peat SoilMFAEMPLDNRTVDKFAGIAACFGFLRPLATSLRSKRLYISSRLFVL
Ga0373958_0093815_39_1793300034819Rhizosphere SoilMFAEMPLDNRTVDQFAALAARIGLLRPLETLPRAKRPFVSPRLIVL


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