Metagenome Family F047897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047897
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	85 residues
Representative Sequence	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Number of Associated Samples	125
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.07 %
% of genes near scaffold ends (potentially truncated)	38.93 %
% of genes from short scaffolds (< 2000 bps)	85.23 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.591 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.148 % of family members)
Environment Ontology (ENVO)	Unclassified (34.899 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.16% β-sheet: 4.65% Coil/Unstructured: 44.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF01176	eIF-1a	27.52
PF06197	DUF998	26.85
PF02811	PHP	13.42
PF02617	ClpS	7.38
PF09438	DUF2017	6.04
PF07733	DNA_pol3_alpha	5.37
PF00149	Metallophos	0.67
PF14579	HHH_6	0.67
PF11832	DUF3352	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	27.52
COG3371	Uncharacterized membrane protein	Function unknown [S]	26.85
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	7.38
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	5.37
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	5.37

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.59 %
Unclassified	root	N/A	11.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.59 %
Unclassified	root	N/A	11.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.59 %
Unclassified	root	N/A	11.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.77 %
Unclassified	root	N/A	11.41 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.77 %
Unclassified	root	N/A	11.41 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.60 %
Unclassified	root	N/A	11.41 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.03 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	36.24 %
Unclassified	root	N/A	11.41 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	36.24 %
Unclassified	root	N/A	11.41 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_11834332	Not Available	598	Open in IMG/M
3300000953\|JGI11615J12901_11023871	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300000955\|JGI1027J12803_102243193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300000956\|JGI10216J12902_103095975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300001305\|C688J14111_10182336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300002568\|C688J35102_119704591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300002568\|C688J35102_120947070	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300003319\|soilL2_10012124	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300003321\|soilH1_10012149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1063	Open in IMG/M
3300004081\|Ga0063454_100007838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2659	Open in IMG/M
3300004114\|Ga0062593_103520094	Not Available	503	Open in IMG/M
3300004156\|Ga0062589_100138656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1643	Open in IMG/M
3300004156\|Ga0062589_100693392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300004157\|Ga0062590_101140213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300004463\|Ga0063356_101073048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1158	Open in IMG/M
3300004463\|Ga0063356_102501185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300004480\|Ga0062592_100519560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300005093\|Ga0062594_100752091	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005093\|Ga0062594_102353386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005093\|Ga0062594_103361792	Not Available	503	Open in IMG/M
3300005294\|Ga0065705_10105164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9114	Open in IMG/M
3300005294\|Ga0065705_10128632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2554	Open in IMG/M
3300005328\|Ga0070676_10170478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1407	Open in IMG/M
3300005332\|Ga0066388_102885477	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005334\|Ga0068869_100258821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1392	Open in IMG/M
3300005336\|Ga0070680_100433904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1121	Open in IMG/M
3300005339\|Ga0070660_101138707	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005345\|Ga0070692_10404297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300005347\|Ga0070668_100185205	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300005364\|Ga0070673_100350194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1311	Open in IMG/M
3300005366\|Ga0070659_100967658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300005366\|Ga0070659_101214646	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005441\|Ga0070700_100017458	All Organisms → cellular organisms → Bacteria	4104	Open in IMG/M
3300005441\|Ga0070700_100182240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1462	Open in IMG/M
3300005441\|Ga0070700_100312991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300005459\|Ga0068867_101013134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300005459\|Ga0068867_101320116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300005547\|Ga0070693_100584767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300005547\|Ga0070693_100598669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300005713\|Ga0066905_100279282	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300005718\|Ga0068866_10591157	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005842\|Ga0068858_102400474	Not Available	521	Open in IMG/M
3300005843\|Ga0068860_102104395	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005873\|Ga0075287_1008187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1241	Open in IMG/M
3300005874\|Ga0075288_1024499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300005887\|Ga0075292_1014991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300005937\|Ga0081455_10054008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3428	Open in IMG/M
3300006058\|Ga0075432_10065641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300006169\|Ga0082029_1618513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300006177\|Ga0075362_10476333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300006844\|Ga0075428_100009719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10683	Open in IMG/M
3300006844\|Ga0075428_100922704	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300009098\|Ga0105245_11795399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300009174\|Ga0105241_11614518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300009174\|Ga0105241_12248248	Not Available	542	Open in IMG/M
3300009553\|Ga0105249_11127158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300009553\|Ga0105249_11379428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300009789\|Ga0126307_10000469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25863	Open in IMG/M
3300010041\|Ga0126312_10422220	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300010042\|Ga0126314_10150997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1618	Open in IMG/M
3300010333\|Ga0134080_10575636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300010371\|Ga0134125_10990892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300010399\|Ga0134127_10773982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300010400\|Ga0134122_10330514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300010401\|Ga0134121_10294179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1435	Open in IMG/M
3300010403\|Ga0134123_11681808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300012891\|Ga0157305_10011379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1431	Open in IMG/M
3300012897\|Ga0157285_10018656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300012897\|Ga0157285_10051065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300012897\|Ga0157285_10297127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300012899\|Ga0157299_10161374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300012900\|Ga0157292_10292912	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300012906\|Ga0157295_10037932	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012908\|Ga0157286_10128351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300012908\|Ga0157286_10170837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300012913\|Ga0157298_10116039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300012915\|Ga0157302_10470068	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300013306\|Ga0163162_12349857	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300014497\|Ga0182008_10229330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300015077\|Ga0173483_10021017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2305	Open in IMG/M
3300015201\|Ga0173478_10225987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300015371\|Ga0132258_10250386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4330	Open in IMG/M
3300015371\|Ga0132258_12421861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1314	Open in IMG/M
3300015373\|Ga0132257_101487726	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300015374\|Ga0132255_101823359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300018028\|Ga0184608_10075404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1374	Open in IMG/M
3300018081\|Ga0184625_10337152	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300018465\|Ga0190269_10389561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300018469\|Ga0190270_10761980	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300019356\|Ga0173481_10117419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300019361\|Ga0173482_10090483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1091	Open in IMG/M
3300019361\|Ga0173482_10549832	Not Available	570	Open in IMG/M
3300021078\|Ga0210381_10403620	Not Available	505	Open in IMG/M
3300021445\|Ga0182009_10032498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2097	Open in IMG/M
3300021445\|Ga0182009_10703660	Not Available	547	Open in IMG/M
3300022883\|Ga0247786_1002308	All Organisms → cellular organisms → Bacteria	3582	Open in IMG/M
3300022883\|Ga0247786_1126809	Not Available	564	Open in IMG/M
3300022915\|Ga0247790_10217148	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300024055\|Ga0247794_10180412	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300025792\|Ga0210143_1043758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300025901\|Ga0207688_10106047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300025907\|Ga0207645_10053475	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300025907\|Ga0207645_11199751	Not Available	509	Open in IMG/M
3300025919\|Ga0207657_10561461	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300025923\|Ga0207681_10750712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300025924\|Ga0207694_11007567	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300025925\|Ga0207650_11111413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300025927\|Ga0207687_10069755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2508	Open in IMG/M
3300025935\|Ga0207709_10258481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1276	Open in IMG/M
3300025940\|Ga0207691_10051949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3745	Open in IMG/M
3300025981\|Ga0207640_10432320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300026116\|Ga0207674_10150100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2288	Open in IMG/M
3300026116\|Ga0207674_10416191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300026121\|Ga0207683_11284157	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300026142\|Ga0207698_11701046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300026753\|Ga0207528_101142	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300026789\|Ga0207513_101528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300026904\|Ga0207584_1006532	Not Available	543	Open in IMG/M
3300027907\|Ga0207428_10088990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2400	Open in IMG/M
3300028380\|Ga0268265_10666746	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300028380\|Ga0268265_11688907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300028712\|Ga0307285_10055000	Not Available	997	Open in IMG/M
3300028717\|Ga0307298_10145090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300028722\|Ga0307319_10072909	Not Available	1088	Open in IMG/M
3300028755\|Ga0307316_10089665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300028778\|Ga0307288_10197899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300028791\|Ga0307290_10256725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300028793\|Ga0307299_10271864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300028796\|Ga0307287_10056219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1453	Open in IMG/M
3300028811\|Ga0307292_10128634	Not Available	1012	Open in IMG/M
3300028819\|Ga0307296_10670164	Not Available	567	Open in IMG/M
3300028872\|Ga0307314_10192382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300028875\|Ga0307289_10007192	All Organisms → cellular organisms → Bacteria	4285	Open in IMG/M
3300028880\|Ga0307300_10017776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300028881\|Ga0307277_10014423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3062	Open in IMG/M
3300030336\|Ga0247826_10390105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300031547\|Ga0310887_10015453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2908	Open in IMG/M
3300031548\|Ga0307408_100135872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1924	Open in IMG/M
3300031731\|Ga0307405_10128988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1744	Open in IMG/M
3300031852\|Ga0307410_10015202	All Organisms → cellular organisms → Bacteria	4558	Open in IMG/M
3300031858\|Ga0310892_11308284	Not Available	519	Open in IMG/M
3300031892\|Ga0310893_10175169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300031901\|Ga0307406_10136860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300031903\|Ga0307407_10029573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2945	Open in IMG/M
3300031908\|Ga0310900_11727004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300031938\|Ga0308175_101116933	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300032080\|Ga0326721_10909735	Not Available	558	Open in IMG/M
3300032205\|Ga0307472_100478888	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300034817\|Ga0373948_0158480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.76%
Host-Associated	Host-Associated	36.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.07%
Plants	Host-Associated → Plants	36.24%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.77%
Sediment	Environmental → Aquatic → Sediment	1.34%
Freshwater	Environmental → Aquatic → Freshwater	0.67%
Marine	Environmental → Aquatic → Marine	0.67%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.41%
Loam	Environmental → Terrestrial → Soil → Loam	8.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.01%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.67%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026753	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-12 (SPAdes)	Environmental	Open in IMG/M
3300026789	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A2a-11 (SPAdes)	Environmental	Open in IMG/M
3300026904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_118343321	3300000858	Soil	GSHDSTVGALTESLLRRKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGI
JGI11615J12901_110238711	3300000953	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAQAIRTLEVDFVHVMGIERLI*
JGI1027J12803_1022431931	3300000955	Soil	MGSNRSVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV*
JGI10216J12902_1030959753	3300000956	Soil	VGALTGSLLRRKALTGPTSAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGVERLL*
C688J14111_101823361	3300001305	Soil	RIPRSGDAPAAFESHDSSVGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
C688J35102_1197045912	3300002568	Soil	VGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
C688J35102_1209470701	3300002568	Soil	VGALTEGLLRRKAQTGSSRAVETHRFICYLDRIPPHILEDPAFRMLPGAGEVQCELEADDFAAAVAEAIRSLEVDFVHVLGIERLP*
soilL2_100121242	3300003319	Sugarcane Root And Bulk Soil	VGALTESLLRRKPLTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLV*
soilH1_100121491	3300003321	Sugarcane Root And Bulk Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0063454_1000078383	3300004081	Soil	VLTEGLLRRKPQTGSSRAVETYRFICYLDRIPPHILEDPAFRMLPGAGEVQCELEGEDFAGAVAEGIRALEVDFVHVLGIERLV*
Ga0062593_1035200941	3300004114	Soil	TGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI*
Ga0062589_1001386563	3300004156	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI*
Ga0062589_1006933921	3300004156	Soil	RIPRSGDAPARFELHDSRVGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0062590_1011402132	3300004157	Soil	VGALTASLLRRKPQTGASSAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGVERLI*
Ga0063356_1010730482	3300004463	Arabidopsis Thaliana Rhizosphere	VGALTASLLRRKPQTGSSSAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGVERLI*
Ga0063356_1025011852	3300004463	Arabidopsis Thaliana Rhizosphere	VGALTGSLLRRKAQTGSSRAVETYRFICYLDRIPPHILEDSAFRMLPGHGEVECELEGEDFAGAVAEAIRTLEVDFVHVLGVERLT*
Ga0062592_1005195601	3300004480	Soil	VGALSESLLRRKPQTGSSRAVETFRFVCYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF*
Ga0062594_1007520912	3300005093	Soil	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLF*
Ga0062594_1023533861	3300005093	Soil	GALTESLLRRKPLTGSSRSVETFRFVCYLDRVPPHILEDSAFRMLPDPGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF*
Ga0062594_1033617921	3300005093	Soil	VGALTESLLRRKPPTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI*
Ga0065705_101051643	3300005294	Switchgrass Rhizosphere	VGALTESLLRRKPQAGSSRAVETFRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0065705_101286322	3300005294	Switchgrass Rhizosphere	VGALTESLLRRKPLMGSNRSVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV*
Ga0070676_101704782	3300005328	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL*
Ga0066388_1028854772	3300005332	Tropical Forest Soil	VGALTESLLRRKPQTGSKPAVETFRFICFLDRVPPHILEDPAFRMLPSQGEVEVELEAEDFAGAVAEAIRTLEVDFVHVLGVERLI*
Ga0068869_1002588214	3300005334	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV*
Ga0070680_1004339042	3300005336	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL*
Ga0070660_1011387072	3300005339	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0070692_104042971	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0070668_1001852053	3300005347	Switchgrass Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0070673_1003501941	3300005364	Switchgrass Rhizosphere	ALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0070659_1009676582	3300005366	Corn Rhizosphere	TESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0070659_1012146462	3300005366	Corn Rhizosphere	MGSNRSVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0070700_1000174583	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RSHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0070700_1001822403	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0070700_1003129911	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	SFRFRSHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0068867_1010131341	3300005459	Miscanthus Rhizosphere	ESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0068867_1013201162	3300005459	Miscanthus Rhizosphere	SHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0070693_1005847672	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VGALTESLLRRKPQTGSNRAVETFRFICYLDRIPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0070693_1005986691	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	FRSHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0066905_1002792823	3300005713	Tropical Forest Soil	VGALTESLLRRKPQTGSKPAVETYRFICFLDRVPPHILEDPAFRMLPSQGEVEVELEAEDFAGAVAEAIRTLEVDFVHVLGVERLI*
Ga0068866_105911572	3300005718	Miscanthus Rhizosphere	VGALTESLLRRKPLTGSSRSVETFRFVCYLDRVPPHILEDSAFRMLPDPGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF*
Ga0068858_1024004741	3300005842	Switchgrass Rhizosphere	AQNTHSGDASDRLGFHDSSVGALTESLLRRKPLTGSSRSVETFRFVCYLDRVPPHILEDSAFRMLPDPGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF*
Ga0068860_1021043952	3300005843	Switchgrass Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0075287_10081874	3300005873	Rice Paddy Soil	VGARTGSLLRRKAQTGPSSAVETFRFICYLDRVPPHILEDSAFRMLPGHGEVECQLEAEDFAGAVSEAIRTLEVDFVHVLGIERLL*
Ga0075288_10244992	3300005874	Rice Paddy Soil	VLTEGLLRRKAQTGPSRAVSTHRFVCYLDRIPPHILEDPAFRMLPDAGEVECELEAEDFATAVAEAIRTLEVDFVHVRGIERLP*
Ga0075292_10149912	3300005887	Rice Paddy Soil	VLTEGLLRRKAQTGPSRAVSTHRFVCCRDRIPPHILEDTAFRMLPGAGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLP*
Ga0081455_100540081	3300005937	Tabebuia Heterophylla Rhizosphere	GSNRSVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0075432_100656413	3300006058	Populus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV*
Ga0082029_16185132	3300006169	Termite Nest	ASVRVRFHDSSVGALTESLLRRKPLTGSSRSVETFRFICYLDRVPPHILEDPAFRTLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLF*
Ga0075362_104763332	3300006177	Populus Endosphere	SGDASAPFQSHDSSVGALTESLLRRKPQAGSNRTVETFRFVCYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0075428_1000097199	3300006844	Populus Rhizosphere	VGALTESLLRRKPQAGSNRTVETFRFVCYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0075428_1009227042	3300006844	Populus Rhizosphere	MGSNRSVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV*
Ga0105245_117953992	3300009098	Miscanthus Rhizosphere	LHDSRVGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0105241_116145181	3300009174	Corn Rhizosphere	SLLRRKPQAGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0105241_122482481	3300009174	Corn Rhizosphere	VGALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0105249_111271582	3300009553	Switchgrass Rhizosphere	MGSNRSVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0105249_113794283	3300009553	Switchgrass Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDSAFRMLPGHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0126307_100004697	3300009789	Serpentine Soil	VGALTESLLRRKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0126312_104222202	3300010041	Serpentine Soil	VGALTESLLRRKPQTGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEGEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0126314_101509973	3300010042	Serpentine Soil	VGALTESLLRRKPQTGSNRAVESFRFICYLDRVPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0134080_105756362	3300010333	Grasslands Soil	VGALTPSLLRRKSRTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPGNGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGIERLI*
Ga0134125_109908922	3300010371	Terrestrial Soil	VGALTGSLLRRKAQTGPSSAVETFRFICYLDRIPPHILEDPAFRMLPGNGEVECELEAEDFAWAVAEAIRTLEVEFVHVLGIERLL*
Ga0134127_107739822	3300010399	Terrestrial Soil	LTESLLRRKPQAGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0134122_103305143	3300010400	Terrestrial Soil	VGALTESLLRRKPQAGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL*
Ga0134121_102941793	3300010401	Terrestrial Soil	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF*
Ga0134123_116818081	3300010403	Terrestrial Soil	GSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0157305_100113793	3300012891	Soil	VGALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0157285_100186562	3300012897	Soil	VGALTESLLRRKPHTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL*
Ga0157285_100510651	3300012897	Soil	IPRSGDASAHFESHDSSVGALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0157285_102971271	3300012897	Soil	RIPRSGDASFRFRSHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDSAFRMLPGHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0157299_101613742	3300012899	Soil	MGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDSAFRMLPGHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI*
Ga0157292_102929122	3300012900	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHV
Ga0157295_100379322	3300012906	Soil	VGALTASLLRRKPQTGSSSAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI*
Ga0157286_101283511	3300012908	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDSAFRMLPGHGEVECELEAEDFAGADAEAIRTLEVDFVHVLGIERVL*
Ga0157286_101708372	3300012908	Soil	VGALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLF*
Ga0157298_101160391	3300012913	Soil	MGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGVERLI*
Ga0157302_104700682	3300012915	Soil	VGALTASLLRRKPQTGSSPAVETFRFVCYLDRIPPHILENPAFRMLPDHGEVECKLEAEDFAGAVAEAIRTLEVDFVHVRGIERLT
Ga0163162_123498573	3300013306	Switchgrass Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIER
Ga0182008_102293302	3300014497	Rhizosphere	GPPGAYAESVGVLTEGLLRRKPPTGSGRAVELHRFICYLDRIPPHILEDPAFRMLPGAGEVQCELEAEDFAAAVAEGIRTLEVDFVHVLGIERLP*
Ga0173483_100210171	3300015077	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLV*
Ga0173478_102259872	3300015201	Soil	LRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL*
Ga0132258_102503863	3300015371	Arabidopsis Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGLERI*
Ga0132258_124218611	3300015371	Arabidopsis Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIE
Ga0132257_1014877263	3300015373	Arabidopsis Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERL
Ga0132255_1018233591	3300015374	Arabidopsis Rhizosphere	VGALTESLLRRKPPTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERL
Ga0184608_100754042	3300018028	Groundwater Sediment	VGALTGSLLRRKAQTGSSRAVETYRFICYLDRIPPHILEVSAFRMLSGHGEVECELEGEDFAGAVAEAIRTLEVDFVHVLGVERLT
Ga0184625_103371522	3300018081	Groundwater Sediment	VGALTGGLLRRKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0190269_103895612	3300018465	Soil	VGALTESLLRRKPQAGSSRAVETFRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0190270_107619802	3300018469	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRTLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0173481_101174193	3300019356	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI
Ga0173482_100904831	3300019361	Soil	KPQTGSNSAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGVERLI
Ga0173482_105498322	3300019361	Soil	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0210381_104036202	3300021078	Groundwater Sediment	SDPFPGHDSTVGALTGGLLRRKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0182009_100324981	3300021445	Soil	SPVRGRNTRPSGAYAESVGVLTEGLLRRKPPTGSGRAVELHRFICYLDRIPPHILEDPAFRMLPGAGEVQCELEAEDFAAAVAEGIRTLEVDFVHVLGIERLP
Ga0182009_107036602	3300021445	Soil	VGALTGSLLRRKALTGPTSAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGVERLL
Ga0247786_10023083	3300022883	Soil	VGALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0247786_11268092	3300022883	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL
Ga0247790_102171482	3300022915	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRG
Ga0247794_101804121	3300024055	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTL
Ga0210143_10437582	3300025792	Natural And Restored Wetlands	RAKRIPVSGDASGSRDGQDSSVGARTGSLLRRKGQTGSSSAVETFRFICYLDRVPPHILEDSAFRMLPGHGEVECQLEAEDFAGAVAEAVRTLEVDFVHVLGIERLL
Ga0207688_101060472	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI
Ga0207645_100534752	3300025907	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL
Ga0207645_111997512	3300025907	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI
Ga0207657_105614612	3300025919	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207681_107507122	3300025923	Switchgrass Rhizosphere	KPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI
Ga0207694_110075672	3300025924	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV
Ga0207650_111114132	3300025925	Switchgrass Rhizosphere	VGALTESLLRRKPQTGSNRAVETFRFICYLDRIPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207687_100697554	3300025927	Miscanthus Rhizosphere	VGALTESLLRRKPLTGSSRSVETFRFVCYLDRVPPHILEDSAFRMLPDPGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF
Ga0207709_102584813	3300025935	Miscanthus Rhizosphere	TESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207691_100519493	3300025940	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207640_104323202	3300025981	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF
Ga0207674_101501003	3300026116	Corn Rhizosphere	LTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207674_104161912	3300026116	Corn Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVEFVHVRGIERLF
Ga0207683_112841571	3300026121	Miscanthus Rhizosphere	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIER
Ga0207698_117010461	3300026142	Corn Rhizosphere	LHDSRVGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0207528_1011422	3300026753	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIELLI
Ga0207513_1015281	3300026789	Soil	RRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPEHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERL
Ga0207584_10065321	3300026904	Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRIPPHILEDPAFRMLAGHGEVECELEAEDFAEAVAEAIRTLEVDFVHVLGVERLI
Ga0207428_100889904	3300027907	Populus Rhizosphere	LLRRKPPTGSSRAVETFRFICYLDRIPPHILEDPAFRMLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVMGIERLI
Ga0268265_106667462	3300028380	Switchgrass Rhizosphere	MGSNRSVETFRFVCYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERLV
Ga0268265_116889072	3300028380	Switchgrass Rhizosphere	RVGALTESLLRRKPQTGSNRAVETFRFICYLDRVPPHILEDPAFRMRPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307285_100550001	3300028712	Soil	VSDPFPGHDSTVGALTGGLLRRKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0307298_101450901	3300028717	Soil	RKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0307319_100729092	3300028722	Soil	LRVGALTESLLRRKPQTGSSRAVETFRFVCYLDRIPPHILEDPAFRSLPSAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307316_100896651	3300028755	Soil	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRIPPHILEDPAFRSLPSAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307288_101978992	3300028778	Soil	VGALTEGLLRRKPLTGSNRAVETFRFICYLDRVPPHILEDPAFRTLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307290_102567251	3300028791	Soil	TVGALTGSLLRRKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0307299_102718641	3300028793	Soil	GSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307287_100562192	3300028796	Soil	VGALTGSLLRRKAQTGSSRAVETYRFICYLDRIPPHILEDSAFRMLSGHGEVECELEGEDFAGAVAEAIRTLEVDFVHVLRVERLT
Ga0307292_101286342	3300028811	Soil	ALTGSLLRRKAQTGSTRSVETHRFICYLDRIPPHILEDPAFRMLPSNGEVECEIDAEDFAGAVAEAIRTLEVEFVHVLGVERLI
Ga0307296_106701641	3300028819	Soil	TESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307314_101923822	3300028872	Soil	KPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307289_100071925	3300028875	Soil	VGALTGSLLRRKAQTGSSRAVETYRFICYLDRIPPHILEDSAFRMLSGHGEVECELEGEDFAGAVAEAIRTLEVDFVHVLGVERLT
Ga0307300_100177761	3300028880	Soil	VGALTESLLRRKPQTGSSRAVETFRFVCYLDRIPPHILEDPAFRSLPSAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGI
Ga0307277_100144233	3300028881	Soil	VGALTEGLLRRKPRTGSNRAVETFRFICYLDRVPPHILEDPAFRTLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0247826_103901051	3300030336	Soil	PQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0310887_100154533	3300031547	Soil	VGALTESLLRRKPQAGSNRTVETFRFVCYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307408_1001358721	3300031548	Rhizosphere	TESLLRHKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAENFAGAVFEAIRTLEVDFVHVLGIERLL
Ga0307405_101289884	3300031731	Rhizosphere	VGALTESLLRRKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAENFAGAVSEAIRTLEVDFVHVLGIERLL
Ga0307410_100152026	3300031852	Rhizosphere	VGALTESLLRHKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAENFAGAVFEAIRTLEVDFVHVLGIERLL
Ga0310892_113082841	3300031858	Soil	GDASFRFRSHDSGVGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDPAFRMLPDHGEVECELEAEDFAGAVAEAIRTLEVDFVHVRGIERI
Ga0310893_101751691	3300031892	Soil	GALTESLLRRKPQTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307406_101368601	3300031901	Rhizosphere	VGALTESLLRRKPQAGSSRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFV
Ga0307407_100295736	3300031903	Rhizosphere	VGALTESLLRRKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAENFAGAVFEAIRTLEVDFVHVLGIERLL
Ga0310900_117270041	3300031908	Soil	QTGSNSAVETYRFVCYLDRIPPHILEDPAFRTLPGQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0308175_1011169333	3300031938	Soil	VGALTESLLRRKPQTGSNRAVEMFRFICYLDRVPPHILEDPAFRMLPSQGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0326721_109097352	3300032080	Soil	VGALTESLLRRKPQAGSNRAVETFRFICYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL
Ga0307472_1004788882	3300032205	Hardwood Forest Soil	VGALTESLLRRKPQTGSSRAVETFRFICYLDRVPPHILEDSAFRMLPDPGEVECELEAEDFAAAVAEAIRTLEVDFVHVRGIERLF
Ga0373948_0158480_10_270	3300034817	Rhizosphere Soil	VGALTESLLRRKPQAGSSRAVETFRFVCYLDRIPPHILEDPAFRSLPGAGEVECELEAEDFAGAVAEAIRTLEVDFVHVLGIERLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences