Metagenome / Metatranscriptome Family F047928

Basic Information
Family ID	F047928
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	74 residues
Representative Sequence	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG
Number of Associated Samples	133
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.38 %
% of genes near scaffold ends (potentially truncated)	52.35 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (65.101 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.503 % of family members)
Environment Ontology (ENVO)	Unclassified (39.597 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.980 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 14.67% Coil/Unstructured: 48.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00239	Resolvase	2.68
PF04392	ABC_sub_bind	1.34
PF10605	3HBOH	1.34
PF00296	Bac_luciferase	1.34
PF11154	DUF2934	1.34
PF04226	Transgly_assoc	0.67
PF01266	DAO	0.67
PF08002	DUF1697	0.67
PF00089	Trypsin	0.67
PF13924	Lipocalin_5	0.67
PF01872	RibD_C	0.67
PF03446	NAD_binding_2	0.67
PF09913	DUF2142	0.67
PF02518	HATPase_c	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.68
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.34
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.67
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.67
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.67
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
All Organisms	root	All Organisms	34.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
cellular organisms	root	All Organisms → cellular organisms	34.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.37 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.01 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.01 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.01 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.34 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.67 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.01 %
Bradyrhizobium sp. Ghvi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	0.67 %
Bradyrhizobium sp. 187	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 187	0.67 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.67 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02ISS84	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100812354	Not Available	516	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100813376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ghvi	596	Open in IMG/M
3300001991\|JGI24743J22301_10071263	Not Available	725	Open in IMG/M
3300002239\|JGI24034J26672_10018412	Not Available	1085	Open in IMG/M
3300004081\|Ga0063454_100169427	Not Available	1190	Open in IMG/M
3300004157\|Ga0062590_102284846	Not Available	568	Open in IMG/M
3300004157\|Ga0062590_102847103	Not Available	517	Open in IMG/M
3300005159\|Ga0066808_1007566	Not Available	935	Open in IMG/M
3300005163\|Ga0066823_10145729	Not Available	521	Open in IMG/M
3300005164\|Ga0066815_10013666	Not Available	1045	Open in IMG/M
3300005165\|Ga0066869_10002411	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300005294\|Ga0065705_10628827	Not Available	690	Open in IMG/M
3300005328\|Ga0070676_10467883	Not Available	889	Open in IMG/M
3300005340\|Ga0070689_100915189	Not Available	776	Open in IMG/M
3300005347\|Ga0070668_101402758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300005356\|Ga0070674_100831649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300005356\|Ga0070674_101398048	Not Available	626	Open in IMG/M
3300005366\|Ga0070659_100404283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1153	Open in IMG/M
3300005366\|Ga0070659_100657646	Not Available	904	Open in IMG/M
3300005455\|Ga0070663_100772210	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005457\|Ga0070662_101614850	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005466\|Ga0070685_10005960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6203	Open in IMG/M
3300005539\|Ga0068853_102175478	Not Available	538	Open in IMG/M
3300005544\|Ga0070686_100142148	Not Available	1671	Open in IMG/M
3300005546\|Ga0070696_101838296	Not Available	524	Open in IMG/M
3300005578\|Ga0068854_100916019	Not Available	771	Open in IMG/M
3300005614\|Ga0068856_101255301	Not Available	757	Open in IMG/M
3300005616\|Ga0068852_100205710	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300005617\|Ga0068859_100117012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	2730	Open in IMG/M
3300005718\|Ga0068866_10090475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1665	Open in IMG/M
3300005834\|Ga0068851_10108612	Not Available	1479	Open in IMG/M
3300006038\|Ga0075365_11227429	Not Available	527	Open in IMG/M
3300006048\|Ga0075363_100710234	Not Available	607	Open in IMG/M
3300006163\|Ga0070715_11068303	Not Available	507	Open in IMG/M
3300006172\|Ga0075018_10836342	Not Available	507	Open in IMG/M
3300006178\|Ga0075367_10869132	Not Available	575	Open in IMG/M
3300006573\|Ga0074055_11829219	Not Available	653	Open in IMG/M
3300006845\|Ga0075421_100289109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1997	Open in IMG/M
3300006854\|Ga0075425_100472681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 187	1444	Open in IMG/M
3300006871\|Ga0075434_101965755	Not Available	590	Open in IMG/M
3300009094\|Ga0111539_10636535	Not Available	1242	Open in IMG/M
3300009101\|Ga0105247_10160785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300009143\|Ga0099792_11106892	Not Available	534	Open in IMG/M
3300009148\|Ga0105243_10371828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1319	Open in IMG/M
3300009162\|Ga0075423_13175458	Not Available	504	Open in IMG/M
3300009551\|Ga0105238_12978059	Not Available	509	Open in IMG/M
3300009553\|Ga0105249_10454415	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300009553\|Ga0105249_11978666	Not Available	655	Open in IMG/M
3300010159\|Ga0099796_10541597	Not Available	523	Open in IMG/M
3300010375\|Ga0105239_10332566	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300010400\|Ga0134122_10553722	Not Available	1052	Open in IMG/M
3300011000\|Ga0138513_100000933	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300011106\|Ga0151489_1112905	Not Available	510	Open in IMG/M
3300011119\|Ga0105246_11231211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300012212\|Ga0150985_112816606	Not Available	659	Open in IMG/M
3300012212\|Ga0150985_116497429	Not Available	603	Open in IMG/M
3300012469\|Ga0150984_106676781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1104	Open in IMG/M
3300012897\|Ga0157285_10379638	Not Available	503	Open in IMG/M
3300012915\|Ga0157302_10127118	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012938\|Ga0162651_100066131	Not Available	589	Open in IMG/M
3300012939\|Ga0162650_100052775	Not Available	669	Open in IMG/M
3300012941\|Ga0162652_100036032	Not Available	761	Open in IMG/M
3300012944\|Ga0137410_11587803	Not Available	573	Open in IMG/M
3300012958\|Ga0164299_10621134	Not Available	742	Open in IMG/M
3300012960\|Ga0164301_10623180	Not Available	800	Open in IMG/M
3300012986\|Ga0164304_11582407	Not Available	545	Open in IMG/M
3300012987\|Ga0164307_11878960	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300013296\|Ga0157374_12106402	Not Available	591	Open in IMG/M
3300013306\|Ga0163162_10399080	Not Available	1508	Open in IMG/M
3300013306\|Ga0163162_13424992	Not Available	506	Open in IMG/M
3300013307\|Ga0157372_11098910	Not Available	920	Open in IMG/M
3300014969\|Ga0157376_10008201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7517	Open in IMG/M
3300015371\|Ga0132258_11721069	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300015374\|Ga0132255_105280574	Not Available	547	Open in IMG/M
3300017792\|Ga0163161_10846837	Not Available	771	Open in IMG/M
3300017792\|Ga0163161_11940258	Not Available	524	Open in IMG/M
3300018027\|Ga0184605_10000988	All Organisms → cellular organisms → Bacteria	8908	Open in IMG/M
3300018031\|Ga0184634_10058444	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300018051\|Ga0184620_10034711	Not Available	1346	Open in IMG/M
3300018067\|Ga0184611_1054759	Not Available	1336	Open in IMG/M
3300018067\|Ga0184611_1116212	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300018072\|Ga0184635_10195538	Not Available	806	Open in IMG/M
3300018073\|Ga0184624_10533246	Not Available	508	Open in IMG/M
3300018081\|Ga0184625_10063577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1865	Open in IMG/M
3300018082\|Ga0184639_10137918	Not Available	1295	Open in IMG/M
3300018082\|Ga0184639_10644995	Not Available	514	Open in IMG/M
3300018083\|Ga0184628_10638562	Not Available	535	Open in IMG/M
3300018469\|Ga0190270_11056617	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300018469\|Ga0190270_11260210	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300018469\|Ga0190270_11881810	Not Available	655	Open in IMG/M
3300019767\|Ga0190267_10308904	Not Available	825	Open in IMG/M
3300019867\|Ga0193704_1006597	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300019869\|Ga0193705_1003920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3271	Open in IMG/M
3300019876\|Ga0193703_1013523	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300019881\|Ga0193707_1048418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300019887\|Ga0193729_1207228	Not Available	662	Open in IMG/M
3300021082\|Ga0210380_10439220	Not Available	598	Open in IMG/M
3300021510\|Ga0222621_1038359	Not Available	994	Open in IMG/M
3300021951\|Ga0222624_1276596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	723	Open in IMG/M
3300022756\|Ga0222622_10284731	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300022756\|Ga0222622_11428107	Not Available	509	Open in IMG/M
3300023058\|Ga0193714_1051587	Not Available	590	Open in IMG/M
3300025735\|Ga0207713_1192968	Not Available	629	Open in IMG/M
3300025899\|Ga0207642_10345219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	876	Open in IMG/M
3300025906\|Ga0207699_10803617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	691	Open in IMG/M
3300025907\|Ga0207645_10056688	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300025920\|Ga0207649_10954914	Not Available	673	Open in IMG/M
3300025928\|Ga0207700_11283225	Not Available	653	Open in IMG/M
3300025934\|Ga0207686_11123341	Not Available	641	Open in IMG/M
3300025936\|Ga0207670_10728826	Not Available	822	Open in IMG/M
3300025937\|Ga0207669_10415613	Not Available	1057	Open in IMG/M
3300025938\|Ga0207704_11894382	Not Available	513	Open in IMG/M
3300025972\|Ga0207668_11282643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300027388\|Ga0208995_1012581	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300027663\|Ga0208990_1113030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300027738\|Ga0208989_10053241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1397	Open in IMG/M
3300027903\|Ga0209488_10174783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1622	Open in IMG/M
3300027909\|Ga0209382_10468314	Not Available	1393	Open in IMG/M
3300028608\|Ga0247819_10904338	Not Available	553	Open in IMG/M
3300028708\|Ga0307295_10144775	Not Available	658	Open in IMG/M
3300028710\|Ga0307322_10060565	Not Available	935	Open in IMG/M
3300028713\|Ga0307303_10068561	Not Available	776	Open in IMG/M
3300028720\|Ga0307317_10033152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1619	Open in IMG/M
3300028720\|Ga0307317_10067796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1161	Open in IMG/M
3300028720\|Ga0307317_10070313	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300028754\|Ga0307297_10133309	Not Available	838	Open in IMG/M
3300028784\|Ga0307282_10468446	Not Available	611	Open in IMG/M
3300028811\|Ga0307292_10086801	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300028876\|Ga0307286_10308707	Not Available	585	Open in IMG/M
3300028885\|Ga0307304_10117774	Not Available	1079	Open in IMG/M
3300030902\|Ga0308202_1013601	Not Available	1182	Open in IMG/M
3300030972\|Ga0075400_11304527	Not Available	568	Open in IMG/M
3300031114\|Ga0308187_10469675	Not Available	511	Open in IMG/M
3300031152\|Ga0307501_10099348	Not Available	733	Open in IMG/M
3300031152\|Ga0307501_10140711	Not Available	647	Open in IMG/M
3300031200\|Ga0307496_10094632	Not Available	574	Open in IMG/M
3300031226\|Ga0307497_10229419	Not Available	819	Open in IMG/M
3300031469\|Ga0170819_12356670	Not Available	523	Open in IMG/M
3300031505\|Ga0308150_1037919	Not Available	559	Open in IMG/M
3300031547\|Ga0310887_10809412	Not Available	589	Open in IMG/M
3300031858\|Ga0310892_10861860	Not Available	632	Open in IMG/M
3300032012\|Ga0310902_10584330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300032075\|Ga0310890_11634265	Not Available	533	Open in IMG/M
3300033551\|Ga0247830_11738629	Not Available	500	Open in IMG/M
3300034644\|Ga0370548_013493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1157	Open in IMG/M
3300034681\|Ga0370546_021102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	865	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.43%
Host-Associated	Host-Associated	35.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.02%
Plants	Host-Associated → Plants	35.57%
Aquatic	Environmental → Aquatic	11.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.75%
Sediment	Environmental → Aquatic → Sediment	10.07%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.68%
Roots	Host-Associated → Plants → Roots	2.01%
Freshwater	Environmental → Aquatic → Freshwater	1.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.72%
Loam	Environmental → Terrestrial → Soil → Loam	8.05%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.01%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.37%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.01%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.01%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.01%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.01%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.34%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.34%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030972	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031505	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_139 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_05773770	2170459010	Grass Soil	MRGGCYSLLNKGDEMTKTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG
INPhiseqgaiiFebDRAFT_1008123541	3300000364	Soil	PHSNPELGSHGLRSSSKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
INPhiseqgaiiFebDRAFT_1008133761	3300000364	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
JGI24743J22301_100712631	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	KTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
JGI24034J26672_100184121	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAG
Ga0063454_1001694272	3300004081	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0062590_1022848462	3300004157	Soil	MTRTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0062590_1028471032	3300004157	Soil	MTGTAQDIIAGVEVLTIVTECYGVGGPGGTDKRGGTKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0066808_10075662	3300005159	Soil	MALAAATMAECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0066823_101457291	3300005163	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG*
Ga0066815_100136663	3300005164	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALK
Ga0066869_100024116	3300005165	Soil	MTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0065705_106288272	3300005294	Switchgrass Rhizosphere	MAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0070676_104678833	3300005328	Miscanthus Rhizosphere	MTKTAQDIISGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0070689_1009151892	3300005340	Switchgrass Rhizosphere	MTKTAQDIISGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALK
Ga0070668_1014027581	3300005347	Switchgrass Rhizosphere	TAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070674_1008316492	3300005356	Miscanthus Rhizosphere	MTKTAQDIIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070674_1013980482	3300005356	Miscanthus Rhizosphere	MTRTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0070659_1004042831	3300005366	Corn Rhizosphere	MTKTAQDIIAGVEVLTTSGATDKRGETQMVVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070659_1006576462	3300005366	Corn Rhizosphere	DGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0070663_1007722101	3300005455	Corn Rhizosphere	SRDLSRHGGGDEMTRTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070662_1016148502	3300005457	Corn Rhizosphere	AQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070685_1000596010	3300005466	Switchgrass Rhizosphere	LLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0068853_1021754782	3300005539	Corn Rhizosphere	IIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0070686_1001421481	3300005544	Switchgrass Rhizosphere	DKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0070696_1018382961	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DKGDGMTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0068854_1009160191	3300005578	Corn Rhizosphere	MTRTAQDIIAGVEVLTTSGATDKRGETQMVVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0068856_1012553012	3300005614	Corn Rhizosphere	MTRTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMNALDTAGFVIVSKEALKAGSDGYG*
Ga0068852_1002057104	3300005616	Corn Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0068859_1001170121	3300005617	Switchgrass Rhizosphere	VLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0068866_100904752	3300005718	Miscanthus Rhizosphere	MTRTAQDIIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0068851_101086124	3300005834	Corn Rhizosphere	LTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0075365_112274291	3300006038	Populus Endosphere	MTRTAQDIIAGVEVLTTSGAADKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0075363_1007102342	3300006048	Populus Endosphere	MTKTAQDIIAGVEVLTTSGATDKRGETKMAVLVGESGAMSIMNALDTAGFVIVSKEALKAGSDGYG*
Ga0070715_110683032	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGPGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG*
Ga0075018_108363421	3300006172	Watersheds	MAKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKA
Ga0075367_108691321	3300006178	Populus Endosphere	MTRTAQDIIAGVEVLTTSGATDKRGETQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0074055_118292192	3300006573	Soil	SLLDKGDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0075421_1002891092	3300006845	Populus Rhizosphere	MTKAVQDIIAGVEVLTIVTECYGGGGHGGTDKRGETKMTVLVGESGAISIMDAIDAAGFVIVSNDALRAGSDGYG*
Ga0075425_1004726813	3300006854	Populus Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKDGSDGYG*
Ga0075434_1019657552	3300006871	Populus Rhizosphere	KTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKDGSDGYG*
Ga0111539_106365353	3300009094	Populus Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRAETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0105247_101607851	3300009101	Switchgrass Rhizosphere	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0099792_111068921	3300009143	Vadose Zone Soil	LLDKGDEMTKAVQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
Ga0105243_103718283	3300009148	Miscanthus Rhizosphere	MTKTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0075423_131754581	3300009162	Populus Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG*
Ga0105238_129780591	3300009551	Corn Rhizosphere	AGVEVLTIVTECYGGGGPGGTDKRGETRMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0105249_104544152	3300009553	Switchgrass Rhizosphere	LNAAMALAAATMAECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG*
Ga0105249_119786661	3300009553	Switchgrass Rhizosphere	MTKTAQDIIAGVEVLTTSGATDKRGETQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0099796_105415971	3300010159	Vadose Zone Soil	LLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESSAISIMDAIDAAGFVIVSNDALKAGSDGYG*
Ga0105239_103325665	3300010375	Corn Rhizosphere	IAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0134122_105537223	3300010400	Terrestrial Soil	LDKGDGMTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0138513_1000009333	3300011000	Soil	LLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
Ga0151489_11129051	3300011106	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGGSGAMSIMDAIHAAGFVIVSNDALKAGSDGYG*
Ga0105246_112312111	3300011119	Miscanthus Rhizosphere	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSK
Ga0150985_1128166061	3300012212	Avena Fatua Rhizosphere	TTILEWFGGGGGETKMTVRVGESGAMSIMNALDAAGFVIVSKEALKAGSDGYG*
Ga0150985_1164974291	3300012212	Avena Fatua Rhizosphere	MTTTVQDIIAGVEVLTTIPKWFGGGETKLTVLIGESGAKSIMNALDAAGFVIVSEEALKAGSDGYG*
Ga0150984_1066767812	3300012469	Avena Fatua Rhizosphere	MTKTAQDIIAGVEVLTTMPERLGGGAAGGTKMTVPIGESGATAIIDALDAAGFVVVSKDALKAGSDGYG*
Ga0157285_103796382	3300012897	Soil	AQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0157302_101271182	3300012915	Soil	MTKTAQDISAGVEVLTTSGATDKRGETQMVVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0162651_1000661311	3300012938	Soil	LLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGPDKRGETKMTVLVGESGVMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0162650_1000527751	3300012939	Soil	DIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
Ga0162652_1000360321	3300012941	Soil	MRDGCYCAASWRGILLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGVMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0137410_115878032	3300012944	Vadose Zone Soil	LLDKGDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
Ga0164299_106211341	3300012958	Soil	GIQNTFDPHSNPELGSHGLRSSSKGDGMAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMAAINAAGFVIVSNDALKAGSDGYG*
Ga0164301_106231801	3300012960	Soil	MTTTVEDIIAGVEVLTTIPEWFSGGGGETKMTVLVGESGAMSIMNALDAAGFVIVSKEALKAGSDGY
Ga0164304_115824071	3300012986	Soil	TIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG
Ga0164307_118789601	3300012987	Soil	AWTRDEMTKTAQDIIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG*
Ga0157374_121064021	3300013296	Miscanthus Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGSGGPDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG*
Ga0163162_103990801	3300013306	Switchgrass Rhizosphere	DIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0163162_134249921	3300013306	Switchgrass Rhizosphere	DIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG*
Ga0157372_110989102	3300013307	Corn Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0157376_1000820110	3300014969	Miscanthus Rhizosphere	LHRGAAPLLDKGDEMTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0132258_117210691	3300015371	Arabidopsis Rhizosphere	GMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG*
Ga0132255_1052805741	3300015374	Arabidopsis Rhizosphere	DPELGSHGLRSSSKGDGMTKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG*
Ga0163161_108468372	3300017792	Switchgrass Rhizosphere	VLTTIPEGFGGGGGETKMTVLVGESGAVSIMNALDAAGFVIVSKEALKAGSDGYG
Ga0163161_119402581	3300017792	Switchgrass Rhizosphere	VLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0184605_100009886	3300018027	Groundwater Sediment	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0184634_100584441	3300018031	Groundwater Sediment	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAINAAGFVIVSNDALKAGSDGYG
Ga0184620_100347111	3300018051	Groundwater Sediment	MTKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0184611_10547592	3300018067	Groundwater Sediment	MTKTAQDISAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0184611_11162122	3300018067	Groundwater Sediment	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0184635_101955381	3300018072	Groundwater Sediment	AQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0184624_105332461	3300018073	Groundwater Sediment	NKMTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKGGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0184625_100635773	3300018081	Groundwater Sediment	MTKTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG
Ga0184639_101379182	3300018082	Groundwater Sediment	MAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0184639_106449951	3300018082	Groundwater Sediment	KTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0184628_106385622	3300018083	Groundwater Sediment	MAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0190270_110566171	3300018469	Soil	DIIAGVEVLTTIPEWFGGGGGETKMTVLVGESGAMSIMNALDAAGFVIVSKEALKAGSDGYG
Ga0190270_112602103	3300018469	Soil	AASSLDEGDEMTTTVQDIIAGVEVLTTIPEWFGGGGGETKMTVLVGESGAMSIMNALDAAGFVIVSKEALKAGSDGYG
Ga0190270_118818101	3300018469	Soil	MTKTAQDIIANVEVLTIVTECYGGGGPGSTDKRGETKMTVLVGESGAMSIMNAINAAGFVIVSNDALKAGSDGYG
Ga0190267_103089043	3300019767	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSLINAINAAGFVIVSNDALKAGSDGYG
Ga0193704_10065973	3300019867	Soil	VAGRLRRCALLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0193705_10039206	3300019869	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALK
Ga0193703_10135231	3300019876	Soil	AGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0193707_10484182	3300019881	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALK
Ga0193729_12072281	3300019887	Soil	MTKTAQDIIAGVEVIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALK
Ga0210380_104392201	3300021082	Groundwater Sediment	CALLDKEDEMTKTAQDIIAGVEVLTIVAECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0222621_10383591	3300021510	Groundwater Sediment	MAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGVMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0222624_12765961	3300021951	Groundwater Sediment	MTKTAQDIIAGVEVLTIVTECYGGGGPDGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0222622_102847312	3300022756	Groundwater Sediment	TECYGGPGGTDKRGETKMTVLVGESAAMSIINAINAAGFVIMSNDALKAGAGSDGSASPDPHSL
Ga0222622_114281071	3300022756	Groundwater Sediment	MTKTAQDIIAGVEVLTTMPERLGGGAAGGTKMTVPIGESGATAIIDALDAAGFVVVSKDALKAGSDGYG
Ga0193714_10515871	3300023058	Soil	LRGIVAAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0207713_11929681	3300025735	Switchgrass Rhizosphere	MTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207642_103452191	3300025899	Miscanthus Rhizosphere	MTKTAQDIIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0207699_108036172	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TTIPEWFSGGGGETKMTVLVGESGAMSIMNALDAAGFVIVSNDALKAGSDGYG
Ga0207645_100566884	3300025907	Miscanthus Rhizosphere	MTKTAQDIISGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207649_109549142	3300025920	Corn Rhizosphere	MTKTAQDIIAGVEVLTIVTECYGGGGSGGPDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207700_112832252	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AQDIIAGVEVLTIVTECYGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207686_111233412	3300025934	Miscanthus Rhizosphere	AGPQPAWTRDEMTKTAQDIIAGVEVLTTSGATDKRGETQMAVLVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0207670_107288262	3300025936	Switchgrass Rhizosphere	MTKTAQYVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207669_104156131	3300025937	Miscanthus Rhizosphere	HRGAVSLLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0207704_118943821	3300025938	Miscanthus Rhizosphere	GGGDEMTRTAQDIIAGVEVLTTRGATDKRGQTQMAVFVGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0207668_112826431	3300025972	Switchgrass Rhizosphere	EGNKMTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0208995_10125811	3300027388	Forest Soil	CAASLLDKGDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMNAIHAAGFVIVSNDALKAGSDGYG
Ga0208990_11130302	3300027663	Forest Soil	VLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMNAIHAAGFVIVSNDALKAGSDGYG
Ga0208989_100532411	3300027738	Forest Soil	EVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMNAIHAAGFVIVSNDALKAGSDGYG
Ga0209488_101747832	3300027903	Vadose Zone Soil	MTETAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0209382_104683141	3300027909	Populus Rhizosphere	MTKAVQDIIAGVEVLTIVTECYGGGGHGGTDKRGETKMTVLVGESGAISIMDAIDAAGFVIVSNDALRAGSDGYG
Ga0247819_109043382	3300028608	Soil	DGMTKTAQDVIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0307295_101447753	3300028708	Soil	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKGGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0307322_100605651	3300028710	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSD
Ga0307303_100685613	3300028713	Soil	GVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0307317_100331523	3300028720	Soil	IAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0307317_100677961	3300028720	Soil	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMAVLVGEGGAMSIMDALDAAGFVIVSKEAL
Ga0307317_100703133	3300028720	Soil	EGDEMATTVQDIIAGVEVLTTIPEWFSGGGAGGGTDERGETKMTVLVGESGAVSIMNALDAAGFVIVSKEALRAGSDGYG
Ga0307297_101333091	3300028754	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSND
Ga0307306_101318551	3300028782	Soil	ERMRSGCYCNLSPARMRCGAASSLDEGDEMTTTVQDIIAGVEVLTTIPEWFGGGGGETKMAVLVGESGAMSIMNALDAAGFVIVSKEALKAGSDGYG
Ga0307282_104684462	3300028784	Soil	MTKTAQDIIAGVEVLTTMPEWLGGGAAGGTKMTVPIGESGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0307292_100868012	3300028811	Soil	MAKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSLINAINAAGFVIVSNDALKAGSDGYG
Ga0307286_103087072	3300028876	Soil	MTGTAQDIIAGVEVLTIVTECYGVGGPGGMDKRGETKMAVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0307304_101177743	3300028885	Soil	DEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0308202_10136011	3300030902	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESCAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0075400_113045271	3300030972	Soil	QDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0308187_104696751	3300031114	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGY
Ga0307501_100993481	3300031152	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAISIMDAIDAAGFVIVSN
Ga0307501_101407111	3300031152	Soil	AGVEVLTIVAECYGGGGPGGTDKRGETKMTVLVGESGAMSIMHAIRAAGFVIVSNDALKAGSDGYG
Ga0307496_100946321	3300031200	Soil	AQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0307497_102294191	3300031226	Soil	CAAGAISLLDKGDEMTTTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG
Ga0307505_101490771	3300031455	Soil	MGMRGGSIAPHRGAVSLLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGSGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0170819_123566701	3300031469	Forest Soil	TAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIHAAGFVIVSNDALKAGSDGYG
Ga0308150_10379191	3300031505	Soil	AGCYCDKSPADCVVCALLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0310887_108094122	3300031547	Soil	MTKTAQEIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0310892_108618601	3300031858	Soil	MTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGEGGAMSIMDALDAAGFVIVSKEALKAGSDGYG
Ga0310902_105843302	3300032012	Soil	MTGTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0310890_116342651	3300032075	Soil	AVSLLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0247830_117386292	3300033551	Soil	APHRGAVSLLDKGDGMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIINAINAAGFVIVSNDALKAGSDGYG
Ga0370548_013493_796_1044	3300034644	Soil	LLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGPGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG
Ga0370546_021102_262_510	3300034681	Soil	LLDKEDEMTKTAQDIIAGVEVLTIVTECYGGGGAGGTDKRGETKMTVLVGESGAMSIMDAIRAAGFVIVSNDALKAGSDGYG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047928

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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