Metagenome Family F047958

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047958
Family Type	Metagenome
Number of Sequences	149
Average Sequence Length	44 residues
Representative Sequence	MINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAFVLLVHAI
Number of Associated Samples	79
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.98 %
% of genes near scaffold ends (potentially truncated)	42.28 %
% of genes from short scaffolds (< 2000 bps)	91.28 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.537 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (31.544 % of family members)
Environment Ontology (ENVO)	Unclassified (48.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.114 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.29% β-sheet: 0.00% Coil/Unstructured: 45.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF00486	Trans_reg_C	4.70
PF17195	DUF5132	2.01
PF09364	XFP_N	1.34
PF00857	Isochorismatase	1.34
PF00106	adh_short	0.67
PF00196	GerE	0.67
PF04828	GFA	0.67
PF01527	HTH_Tnp_1	0.67
PF01471	PG_binding_1	0.67
PF05598	DUF772	0.67
PF03466	LysR_substrate	0.67
PF07394	DUF1501	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.34
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.34
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
All Organisms	root	All Organisms	19.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
cellular organisms	root	All Organisms → cellular organisms	19.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.37 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Xanthomonas oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Xanthomonas oryzae pv. oryzae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.37 %
Xanthomonas oryzae pv. oryzae KACC 10331	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	0.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10277194	Not Available	675	Open in IMG/M
3300002568\|C688J35102_120408908	Not Available	1047	Open in IMG/M
3300004633\|Ga0066395_10273539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300004633\|Ga0066395_10439815	Not Available	742	Open in IMG/M
3300005332\|Ga0066388_102889101	Not Available	878	Open in IMG/M
3300005332\|Ga0066388_103517356	Not Available	800	Open in IMG/M
3300005332\|Ga0066388_104233110	Not Available	731	Open in IMG/M
3300005468\|Ga0070707_102307907	Not Available	505	Open in IMG/M
3300005764\|Ga0066903_100114197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3720	Open in IMG/M
3300005764\|Ga0066903_100219171	Not Available	2881	Open in IMG/M
3300005764\|Ga0066903_100618321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1883	Open in IMG/M
3300005764\|Ga0066903_101444416	Not Available	1295	Open in IMG/M
3300005764\|Ga0066903_102702158	Not Available	963	Open in IMG/M
3300005764\|Ga0066903_104705542	Not Available	726	Open in IMG/M
3300005983\|Ga0081540_1314973	Not Available	537	Open in IMG/M
3300009792\|Ga0126374_10500523	Not Available	876	Open in IMG/M
3300009792\|Ga0126374_10850822	Not Available	702	Open in IMG/M
3300010043\|Ga0126380_12033473	Not Available	527	Open in IMG/M
3300010046\|Ga0126384_10172836	Not Available	1685	Open in IMG/M
3300010046\|Ga0126384_11261350	Not Available	684	Open in IMG/M
3300010047\|Ga0126382_11546587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300010048\|Ga0126373_10114299	Not Available	2516	Open in IMG/M
3300010048\|Ga0126373_10170875	Not Available	2084	Open in IMG/M
3300010048\|Ga0126373_10444910	Not Available	1329	Open in IMG/M
3300010048\|Ga0126373_10595164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300010048\|Ga0126373_10916434	Not Available	941	Open in IMG/M
3300010048\|Ga0126373_11300229	Not Available	793	Open in IMG/M
3300010048\|Ga0126373_12008089	Not Available	641	Open in IMG/M
3300010162\|Ga0131853_10587690	Not Available	964	Open in IMG/M
3300010358\|Ga0126370_10594719	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010358\|Ga0126370_12083727	Not Available	556	Open in IMG/M
3300010359\|Ga0126376_10221888	All Organisms → cellular organisms → Bacteria → Proteobacteria	1585	Open in IMG/M
3300010359\|Ga0126376_10698921	Not Available	975	Open in IMG/M
3300010360\|Ga0126372_10620609	Not Available	1041	Open in IMG/M
3300010360\|Ga0126372_10828155	Not Available	920	Open in IMG/M
3300010361\|Ga0126378_10146634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2397	Open in IMG/M
3300010361\|Ga0126378_10337768	Not Available	1614	Open in IMG/M
3300010361\|Ga0126378_11496574	Not Available	765	Open in IMG/M
3300010366\|Ga0126379_10108142	Not Available	2492	Open in IMG/M
3300010366\|Ga0126379_10161117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2106	Open in IMG/M
3300010366\|Ga0126379_10416236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1396	Open in IMG/M
3300010366\|Ga0126379_10445299	Not Available	1355	Open in IMG/M
3300010376\|Ga0126381_100464737	Not Available	1777	Open in IMG/M
3300010376\|Ga0126381_100897422	Not Available	1276	Open in IMG/M
3300010376\|Ga0126381_101908352	Not Available	857	Open in IMG/M
3300010376\|Ga0126381_102465402	Not Available	746	Open in IMG/M
3300010376\|Ga0126381_102480319	Not Available	743	Open in IMG/M
3300010376\|Ga0126381_102570688	Not Available	729	Open in IMG/M
3300010376\|Ga0126381_103274747	Not Available	639	Open in IMG/M
3300010376\|Ga0126381_103342257	Not Available	632	Open in IMG/M
3300010376\|Ga0126381_103393400	Not Available	627	Open in IMG/M
3300010398\|Ga0126383_10207406	Not Available	1887	Open in IMG/M
3300010398\|Ga0126383_10763629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300010398\|Ga0126383_13025259	Not Available	549	Open in IMG/M
3300012971\|Ga0126369_10263421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1704	Open in IMG/M
3300012971\|Ga0126369_11924186	Not Available	680	Open in IMG/M
3300012971\|Ga0126369_12552439	Not Available	596	Open in IMG/M
3300016270\|Ga0182036_10470693	All Organisms → cellular organisms → Bacteria → Proteobacteria	991	Open in IMG/M
3300016319\|Ga0182033_10112263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2030	Open in IMG/M
3300016357\|Ga0182032_10186891	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300016357\|Ga0182032_10484513	Not Available	1014	Open in IMG/M
3300016357\|Ga0182032_10651601	Not Available	880	Open in IMG/M
3300016387\|Ga0182040_10119339	Not Available	1827	Open in IMG/M
3300016387\|Ga0182040_10843198	Not Available	757	Open in IMG/M
3300016387\|Ga0182040_11438821	Not Available	584	Open in IMG/M
3300016445\|Ga0182038_11553830	Not Available	595	Open in IMG/M
3300017970\|Ga0187783_10612394	Not Available	787	Open in IMG/M
3300020580\|Ga0210403_11135797	Not Available	605	Open in IMG/M
3300020581\|Ga0210399_10961058	Not Available	690	Open in IMG/M
3300021358\|Ga0213873_10239162	Not Available	573	Open in IMG/M
3300021439\|Ga0213879_10070267	Not Available	952	Open in IMG/M
3300021479\|Ga0210410_10838619	Not Available	805	Open in IMG/M
3300021559\|Ga0210409_11341350	Not Available	591	Open in IMG/M
3300021560\|Ga0126371_10232134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1953	Open in IMG/M
3300021560\|Ga0126371_10333854	Not Available	1648	Open in IMG/M
3300021560\|Ga0126371_10371857	Not Available	1567	Open in IMG/M
3300021560\|Ga0126371_12299720	Not Available	651	Open in IMG/M
3300021560\|Ga0126371_12825997	Not Available	589	Open in IMG/M
3300021560\|Ga0126371_12893966	Not Available	582	Open in IMG/M
3300025910\|Ga0207684_11064955	Not Available	674	Open in IMG/M
3300027502\|Ga0209622_1097232	Not Available	540	Open in IMG/M
3300027701\|Ga0209447_10066883	Not Available	986	Open in IMG/M
3300027729\|Ga0209248_10142725	Not Available	715	Open in IMG/M
3300027874\|Ga0209465_10011413	All Organisms → cellular organisms → Bacteria	3948	Open in IMG/M
3300031545\|Ga0318541_10090462	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300031545\|Ga0318541_10854697	Not Available	508	Open in IMG/M
3300031561\|Ga0318528_10651521	Not Available	564	Open in IMG/M
3300031564\|Ga0318573_10185656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1100	Open in IMG/M
3300031573\|Ga0310915_10152049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas oryzae → Xanthomonas oryzae pv. oryzae → Xanthomonas oryzae pv. oryzae KACC 10331	1600	Open in IMG/M
3300031573\|Ga0310915_10592901	Not Available	786	Open in IMG/M
3300031573\|Ga0310915_11288883	Not Available	503	Open in IMG/M
3300031668\|Ga0318542_10616630	Not Available	566	Open in IMG/M
3300031679\|Ga0318561_10251397	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300031680\|Ga0318574_10325663	Not Available	894	Open in IMG/M
3300031718\|Ga0307474_11629463	Not Available	507	Open in IMG/M
3300031719\|Ga0306917_10595594	Not Available	869	Open in IMG/M
3300031719\|Ga0306917_10860033	Not Available	710	Open in IMG/M
3300031724\|Ga0318500_10395240	Not Available	687	Open in IMG/M
3300031736\|Ga0318501_10273647	Not Available	897	Open in IMG/M
3300031744\|Ga0306918_10257553	Not Available	1334	Open in IMG/M
3300031751\|Ga0318494_10490789	Not Available	716	Open in IMG/M
3300031771\|Ga0318546_11119462	Not Available	553	Open in IMG/M
3300031781\|Ga0318547_10351542	Not Available	900	Open in IMG/M
3300031781\|Ga0318547_10574740	Not Available	698	Open in IMG/M
3300031832\|Ga0318499_10342989	Not Available	575	Open in IMG/M
3300031833\|Ga0310917_10385227	Not Available	953	Open in IMG/M
3300031833\|Ga0310917_10551199	Not Available	784	Open in IMG/M
3300031845\|Ga0318511_10630050	Not Available	501	Open in IMG/M
3300031879\|Ga0306919_10054986	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300031879\|Ga0306919_10465447	Not Available	973	Open in IMG/M
3300031879\|Ga0306919_11035569	Not Available	627	Open in IMG/M
3300031879\|Ga0306919_11340730	Not Available	541	Open in IMG/M
3300031890\|Ga0306925_10024409	All Organisms → cellular organisms → Bacteria → Proteobacteria	6092	Open in IMG/M
3300031890\|Ga0306925_10875082	Not Available	926	Open in IMG/M
3300031893\|Ga0318536_10234277	Not Available	934	Open in IMG/M
3300031897\|Ga0318520_10390953	Not Available	849	Open in IMG/M
3300031910\|Ga0306923_11579892	Not Available	683	Open in IMG/M
3300031912\|Ga0306921_11007153	Not Available	939	Open in IMG/M
3300031912\|Ga0306921_11287791	Not Available	809	Open in IMG/M
3300031941\|Ga0310912_11065932	Not Available	618	Open in IMG/M
3300031941\|Ga0310912_11284308	Not Available	555	Open in IMG/M
3300031942\|Ga0310916_10166822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1827	Open in IMG/M
3300031942\|Ga0310916_11034375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	684	Open in IMG/M
3300031945\|Ga0310913_10357178	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031945\|Ga0310913_10624848	Not Available	763	Open in IMG/M
3300031947\|Ga0310909_10055067	Not Available	3071	Open in IMG/M
3300031947\|Ga0310909_10362099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300031947\|Ga0310909_11489422	Not Available	539	Open in IMG/M
3300031954\|Ga0306926_10691255	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300031954\|Ga0306926_11376064	Not Available	820	Open in IMG/M
3300031954\|Ga0306926_11752017	Not Available	707	Open in IMG/M
3300031954\|Ga0306926_12039503	Not Available	644	Open in IMG/M
3300031954\|Ga0306926_12328735	Not Available	592	Open in IMG/M
3300031954\|Ga0306926_12796432	Not Available	527	Open in IMG/M
3300031962\|Ga0307479_11828614	Not Available	559	Open in IMG/M
3300032001\|Ga0306922_11816819	Not Available	599	Open in IMG/M
3300032035\|Ga0310911_10388395	Not Available	807	Open in IMG/M
3300032035\|Ga0310911_10632356	Not Available	621	Open in IMG/M
3300032043\|Ga0318556_10360637	Not Available	760	Open in IMG/M
3300032054\|Ga0318570_10465728	Not Available	577	Open in IMG/M
3300032055\|Ga0318575_10500818	Not Available	617	Open in IMG/M
3300032059\|Ga0318533_10767546	Not Available	707	Open in IMG/M
3300032091\|Ga0318577_10323783	Not Available	737	Open in IMG/M
3300032091\|Ga0318577_10493217	Not Available	584	Open in IMG/M
3300032094\|Ga0318540_10193530	Not Available	979	Open in IMG/M
3300032261\|Ga0306920_100263181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2572	Open in IMG/M
3300032261\|Ga0306920_100462011	Not Available	1886	Open in IMG/M
3300032261\|Ga0306920_102207371	Not Available	765	Open in IMG/M
3300033289\|Ga0310914_11580775	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.99%
Host-Associated	Host-Associated	2.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.64%
Aquatic	Environmental → Aquatic	1.34%
Plants	Host-Associated → Plants	1.34%
Arthropoda	Host-Associated → Arthropoda	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.64%
Freshwater	Environmental → Aquatic → Freshwater	1.34%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.56%
Loam	Environmental → Terrestrial → Soil → Loam	11.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.67%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	31.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102771942	3300001867	Forest Soil	MHPAILESAMINWPEMLRNAEDWAKGFWAGTGTVSLIGIAGVAVVLLVHAI*
C688J35102_1204089081	3300002568	Soil	MEPCHVQWLKMLRHAEDWAEGFWAGAASALLMLVAGTAFVLLVRAI*
Ga0066395_102735391	3300004633	Tropical Forest Soil	AQYRTKFAGYENRVVWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI*
Ga0066395_104398152	3300004633	Tropical Forest Soil	MERAMINWPEMLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVRTI*
Ga0066388_1028891011	3300005332	Tropical Forest Soil	MINWSEMLRHAEDWADGFWAGATGASLMLIAGTAFVLLVRAI*
Ga0066388_1035173562	3300005332	Tropical Forest Soil	MFNWPQMLRYAEDWADGFLAGAATVSLIGIAGAAFVLLVRTV*
Ga0066388_1042331102	3300005332	Tropical Forest Soil	MMNWPEMLRHAEDWANGFLAGAATVSLIGIAGAAFVLLVRTI*
Ga0070707_1023079071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PAMINWAEMLGHAEDWANGFWVGAATSSLIAISGAALMLFLHAI*
Ga0066903_1001141978	3300005764	Tropical Forest Soil	WRLQMFNWPQMLRYAEDWADGFLAGAATVSLIGIAGAAFVLLVRTV*
Ga0066903_1002191716	3300005764	Tropical Forest Soil	MINWPEMLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVRTI*
Ga0066903_1006183216	3300005764	Tropical Forest Soil	MFNWPQMLRYAEDWADGFLAGAATVSLIGIAGAAFV
Ga0066903_1014444161	3300005764	Tropical Forest Soil	MIDWPEMLRHAEDWVDGFWAGAATASLIGIAGAAFLLLVHTI*
Ga0066903_1027021582	3300005764	Tropical Forest Soil	MIDWPELLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVHTI*
Ga0066903_1047055422	3300005764	Tropical Forest Soil	MMNWPEMLRHAEDWANGFLAGAATASLIGIAGAAFVLLVRTI*
Ga0081540_13149732	3300005983	Tabebuia Heterophylla Rhizosphere	MINWPEMLRHAEDWAGGFWVGAASASLMFIAGAALVLLGRVI*
Ga0126374_105005232	3300009792	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATVSLIGIAGAAFVLLVRTI*
Ga0126374_108508222	3300009792	Tropical Forest Soil	MNQVIVDPAMINWPEMLHHADGWADGFWAGAATTSLIAIAGAALVLFGHAI*
Ga0126380_120334731	3300010043	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATVSLIGIAGAAFVLLV
Ga0126384_101728362	3300010046	Tropical Forest Soil	MMNWPEMLRHAEDWANGFLAGAATASLIGIAGVAFVLLVRTI*
Ga0126384_112613501	3300010046	Tropical Forest Soil	MEAAMINWPEMLRYAEDWTNGFWAGAATVSLIGIAGAAFVLLVRTI*
Ga0126382_115465872	3300010047	Tropical Forest Soil	MELAMFNWPEMLRHAEDWADGFWAGATSASLMLIAGAAFVLMVRTI*
Ga0126373_101142992	3300010048	Tropical Forest Soil	MEIAMINWPEMLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVHTI*
Ga0126373_101708754	3300010048	Tropical Forest Soil	MINWPELLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVRTI*
Ga0126373_104449101	3300010048	Tropical Forest Soil	MINWPEMLRYAEDWADGFLTGAATVSLIGVAGVAFVLLVHTI*
Ga0126373_105951642	3300010048	Tropical Forest Soil	MEAAMVNWPEMLRYAEDWTNGFWAGAATVSLIGIAGAAFVLLVRTI*
Ga0126373_109164342	3300010048	Tropical Forest Soil	MINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI*
Ga0126373_113002291	3300010048	Tropical Forest Soil	MELAMFNWPQVLRRAEDWVDGFWAGATSASLMLIAGAAFVLLVRTI*
Ga0126373_120080891	3300010048	Tropical Forest Soil	MEVAMINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI*
Ga0131853_105876902	3300010162	Termite Gut	MINWPEMLRYAEDWADGFLARAATVSLIGIAGAAFVLLVHAI*
Ga0126370_105947191	3300010358	Tropical Forest Soil	NPRCRTKSPPMNQVIVDPAMINWPEMLHHADGWADGFWAGAATTSLIAIAGAALVLFGHAI*
Ga0126370_120837272	3300010358	Tropical Forest Soil	PEMLRHAEDWANGFLAGAATASLIGIAGVAFVLLVRTI*
Ga0126376_102218881	3300010359	Tropical Forest Soil	MINWPEMLRHAEDWAKGFWAGAATASLIGIVVVAVALLSQAI*
Ga0126376_106989212	3300010359	Tropical Forest Soil	MFNWPQMLRYAEDWADGFLAGAATVSLLGIAGAAFVLLVRTV*
Ga0126372_106206092	3300010360	Tropical Forest Soil	MINWLELLCHAEDWAKGFWAGAATVSLIGIAGAAFVLLVHSI*
Ga0126372_108281551	3300010360	Tropical Forest Soil	MFNWPEMLRQAEEWADRFLARVATVSLIGIAGAAFV
Ga0126378_101466345	3300010361	Tropical Forest Soil	MINWPELLCHAEDWAKGFWAGAATVSLIGIAGAAFVLLVHTI*
Ga0126378_103377685	3300010361	Tropical Forest Soil	HVIMEISMMNWPEMLRHAEDWANGFLAGAATASLIGIAGAAFVLLVRTI*
Ga0126378_114965741	3300010361	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATVSLIGIAGA
Ga0126379_101081423	3300010366	Tropical Forest Soil	MMNWPEMLRHAEDWANGFFAGAATASLIGIAGAAFVLLVRTI*
Ga0126379_101611173	3300010366	Tropical Forest Soil	MINWPELLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVHTI*
Ga0126379_104162361	3300010366	Tropical Forest Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI*
Ga0126379_104452992	3300010366	Tropical Forest Soil	MLRYAEDWADGFLAGAATVSLLGIAGAAFVLLVRTV*
Ga0126381_1004647372	3300010376	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATASLIGIAGAAFVLLVRTI*
Ga0126381_1008974221	3300010376	Tropical Forest Soil	MLRYAEDWADGFLAGAATVSLLGIAGAAFVLLVRTV
Ga0126381_1019083523	3300010376	Tropical Forest Soil	MFNWPEMLRHAEDWAKGFWAGAATASLIGIAGAVVVLLSHAI*
Ga0126381_1024654021	3300010376	Tropical Forest Soil	KGDCKMFTWPEMLRHAEDWVDGFLAGAATISLIGIAGAAFVLLVRTI*
Ga0126381_1024803191	3300010376	Tropical Forest Soil	MELEMINWPEMLRHAEDWTDGFWVGAASASLLLFTGAVFVLLARAI*
Ga0126381_1025706882	3300010376	Tropical Forest Soil	VLTERAMINWPEMLRNAEDWARGFWAGAGTVSPIGIAGAAVVLFVHAI*
Ga0126381_1032747471	3300010376	Tropical Forest Soil	HIIMEVAMINWPEMLRHAEDWANGFLSGAATVSLIGIAAVALVLLVRTI*
Ga0126381_1033422571	3300010376	Tropical Forest Soil	LRHAEDWAKGFWAGAATVSLMGIAGAAFVLLVHTI*
Ga0126381_1033934002	3300010376	Tropical Forest Soil	MINWPEMLRYAEDWADGFLTGAATVSLIGVAGVAFVLLVHT
Ga0126383_102074064	3300010398	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATASLIGIAGVAFVLLVRTI*
Ga0126383_107636293	3300010398	Tropical Forest Soil	EMLRYAEDWAEGFWARARTVSLIGIAGAAFVVLVHTI*
Ga0126383_130252592	3300010398	Tropical Forest Soil	MNQVIVDPAMINWPEMLHYADGWADGFWAGAATTSLIAIAGAALVLFGHAI*
Ga0126369_102634212	3300012971	Tropical Forest Soil	MERAMINWPEMLRHAEDWAKGFWAGAATASLIGIAAAAFVLLVHTI*
Ga0126369_119241861	3300012971	Tropical Forest Soil	MINWPEMLRHAEDWSDGFWAGATSASLMLIAGTAFVLLVRAI*
Ga0126369_125524391	3300012971	Tropical Forest Soil	NWPEMLRHAEDWANGFLAGAATASLIGIAGAAFVLLVRTI*
Ga0182036_104706931	3300016270	Soil	AMINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFLLFVHAI
Ga0182033_101122636	3300016319	Soil	MINWAKMLCHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0182032_101868913	3300016357	Soil	MINWAEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0182032_104845132	3300016357	Soil	NWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0182032_106516011	3300016357	Soil	MINWPEMLHHAEEGADGFLAGAVTVSLIGIAGVALL
Ga0182040_101193392	3300016387	Soil	MINWAEMLCHAEDWANGFWVGAATSSLVAISGAALMLFVHAI
Ga0182040_108431981	3300016387	Soil	PYSRRFSHHVIMEVAMINWPEMLRHAEDWANGFLAGATTISLIGVAGAAVVLLVHAI
Ga0182040_114388211	3300016387	Soil	MFNWPEMLRYAEDWAEGFWARARTVSLIGITGAAFVLLVRTI
Ga0182038_115538301	3300016445	Soil	MLRHAEDWANGFLAGATTVSLIGVGGAAFVLLVHAI
Ga0187783_106123941	3300017970	Tropical Peatland	MINWPEIFRNAEAWALGFWVGAATVSLIGIAGAAVVLVIHVI
Ga0210403_111357971	3300020580	Soil	MINWPEMLRHAEDWANGFWAGATSASLMVIAGVAFVLLVRSI
Ga0210399_109610582	3300020581	Soil	MINWPEMLRHAEDWANGFWSGATSASLMVIAGVAFVLLVRSI
Ga0213873_102391621	3300021358	Rhizosphere	MINWPKMLGHAEDWAKGFWTGAATASLVAITGAVIIVLVRTI
Ga0213879_100702672	3300021439	Bulk Soil	MINWPKMLGHAEDWAKGFWTGAATASLVAIIGAVIMLLVRTI
Ga0210410_108386192	3300021479	Soil	NWPEMLRHAEDWANGFWSGATSASLMVIAGVAFVLLVRSI
Ga0210409_113413501	3300021559	Soil	QMINWPEMLRHAEDWANGFWAGAATTSLIVIMGAAVALFAHTI
Ga0126371_102321346	3300021560	Tropical Forest Soil	MFNWPQMLRYAEDWADGFLAGAATVSLIGIAGAAFVLLVRTV
Ga0126371_103338542	3300021560	Tropical Forest Soil	MINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0126371_103718571	3300021560	Tropical Forest Soil	MINWPEMLRHAEDWAKGFWAGAATVSLIGIAGAAFVLLVRTI
Ga0126371_122997202	3300021560	Tropical Forest Soil	MEISMMNWPEMLRHAEDWANGFLAGAATVSLIGIAGAAFVLLVRTI
Ga0126371_128259972	3300021560	Tropical Forest Soil	MINWPEMLRHAEDWAKGFWAGAATVSLIGIAGAVFVL
Ga0126371_128939662	3300021560	Tropical Forest Soil	MNQVIVDPAMINWPEMLHHADGWADGFWAGAATTSLIAIAGAALVLFGHAI
Ga0207684_110649551	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MINWPEMLGHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0209622_10972321	3300027502	Forest Soil	IMEVTMINWPEMLLYAEDWANGFLAGAATISLIGIAGVAFVLLVHPI
Ga0209447_100668832	3300027701	Bog Forest Soil	MFKWPEMLRHAEDWADGFWAGAASVSLMLVAGTAFVLLVRAI
Ga0209248_101427251	3300027729	Bog Forest Soil	MEFAMFKWPEMLRHAEDWADGFWAGAASVSLMLVAGTAFVLLVRAI
Ga0209465_100114137	3300027874	Tropical Forest Soil	MNWPEMLRHAEDWANGFLAGAATVSLIGIAGAAFVLLVRTI
Ga0318541_100904624	3300031545	Soil	MINWPEMLRHAEDWANGFLAGAVTVSLIAISGAALMLFVHAI
Ga0318541_108546971	3300031545	Soil	MINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLIHAI
Ga0318528_106515211	3300031561	Soil	IMEVAMINWPEMLRHAEDWANGFLAGATTISLIGVAGAAVVLLVHAI
Ga0318573_101856562	3300031564	Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0310915_101520491	3300031573	Soil	MINWPEMLRHAEDWANGFFTGATTVSLIGVAGTAFVLLVHAI
Ga0310915_105929011	3300031573	Soil	RNPYSRRFSHHVIMEVAMINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0310915_112888831	3300031573	Soil	HHVIMEVAMINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAFVLLVHAI
Ga0318542_106166301	3300031668	Soil	LMHPAILEIAMTNWPEMLRNAEDWAKGFWAGAVTVSLIGIAGAAVVLFVHAI
Ga0318561_102513972	3300031679	Soil	MLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0318574_103256631	3300031680	Soil	HVVMEVAMINWPEMLRHAEDWANGFLAGAVTISLIAISGAALMLFVHAI
Ga0307474_116294631	3300031718	Hardwood Forest Soil	MINWPEMLRQTEDWAKGFWTGAATVSLIGIAGAAFVVLARAI
Ga0306917_105955941	3300031719	Soil	NRVVWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0306917_108600331	3300031719	Soil	AMINWPEMLRHAEDWANGFLAGATTVSLIGGAGAAFVLLVHAI
Ga0318500_103952402	3300031724	Soil	MINWAEMLCHAEDWANGFWVGAATSSLIAISGAALM
Ga0318501_102736471	3300031736	Soil	SWWRNPYSRRFSHHVVMEVAMINWPEMLRHAEDWANGFLAGAVTISLIAISGAALMLFVHAI
Ga0306918_102575531	3300031744	Soil	MEAAMINWPEMLRHAEDWANGFLAGATTVSLIGGAGAAFVLLVHAI
Ga0318494_104907892	3300031751	Soil	MINWPEMLRHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0318546_111194621	3300031771	Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFLL
Ga0318547_103515421	3300031781	Soil	SHHGIMEVAMINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0318547_105747402	3300031781	Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFLLFVHAI
Ga0318499_103429892	3300031832	Soil	NDVVWEPAMINWAEMLCHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0310917_103852271	3300031833	Soil	ASAKKRRLQMVNWAEMLRHAEDWATGFWAGAATASLIGIAGAAFLLLVRTI
Ga0310917_105511991	3300031833	Soil	MINWPEMLRHAEDWVNGFLAGATTVSLIGVAGAAF
Ga0318511_106300502	3300031845	Soil	MEVAMINWPEMLRHAEDWANGFLAGAVTVSLIAISGAALMLFVHAI
Ga0306919_100549864	3300031879	Soil	MINWAEMLCHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0306919_104654472	3300031879	Soil	MINWPEMLRHAEDWANGFLAGAVTISLIAISGAALMLFVHAI
Ga0306919_110355691	3300031879	Soil	MINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0306919_113407302	3300031879	Soil	METAMINWPEMLRHAEDWANGFFTGATTVSLIGVAGTAFVLLVHAI
Ga0306925_100244091	3300031890	Soil	MINWAKMLCHAEDWANGFWVGAATSSLIAISGAALMLFLHAI
Ga0306925_108750821	3300031890	Soil	MEVAMINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0318536_102342771	3300031893	Soil	MINWPEMLRHAEDWANGFLAGAVTVSLIAISGAALMLF
Ga0318520_103909531	3300031897	Soil	IMEVAMINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAFVLLVHAI
Ga0306923_115798921	3300031910	Soil	MEIAMINWPEMLRHAEDWANRFLAGAVTVSLIGIAGAAFLLLVHPI
Ga0306921_110071531	3300031912	Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHPI
Ga0306921_112877911	3300031912	Soil	RFSHHGIMEVAMINWPDMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0310912_110659322	3300031941	Soil	MINWPEMLCHAEDWANGFWVGAATSSLMAISGAALM
Ga0310912_112843081	3300031941	Soil	RNPYSRRFSHHVIMEVAMINWPEMLRHAEDWANGFLAGATTISLIGVAGAAVVLLVHAI
Ga0310916_101668224	3300031942	Soil	MINWPEMLRHAEDWANGFLAGATTISLIGVAGAAVVLLVHAI
Ga0310916_110343752	3300031942	Soil	IMEVAMINWPEMLRHAEDWANGFLAGATTVSLIGVGGAAFVLLVHAI
Ga0310913_103571783	3300031945	Soil	MINWAEMLCHAEDWANGFWVGAATSSLIAISGAALML
Ga0310913_106248481	3300031945	Soil	DVVWEPAMINWAEMLCHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0310909_100550671	3300031947	Soil	MINWPEMLCHAEDWANGFWVGAATSSLMAISGAAVMLFVHAI
Ga0310909_103620991	3300031947	Soil	MINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAF
Ga0310909_114894221	3300031947	Soil	VWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0306926_106912552	3300031954	Soil	MINWPEMLRRAEDWAKGFWAGAATASLIVIVGAAVALLGHAI
Ga0306926_113760641	3300031954	Soil	MINWPEMLRHAEDWANGFLAGATTVSLIGVGGAAFVLLVHAI
Ga0306926_117520172	3300031954	Soil	WPDKLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0306926_120395031	3300031954	Soil	MINWPEMLHHAEEGADGFLAGAVTVSLIGIAGVALLLLVHAI
Ga0306926_123287351	3300031954	Soil	MEAAMINWPEMLHHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0306926_127964321	3300031954	Soil	MINWPEMLRHAEDWANGFLARAVTVSLIAISGAALMLFVHAI
Ga0307479_118286142	3300031962	Hardwood Forest Soil	MINWPQMLRYAEDWTNGFWAGAATVSLIGIAGAAFVLLVRTI
Ga0306922_118168191	3300032001	Soil	QIRRLRNRVVWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0310911_103883951	3300032035	Soil	MLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0310911_106323562	3300032035	Soil	LAATVFAAEMLRHAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0318556_103606371	3300032043	Soil	KFAGYENRVVWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0318570_104657282	3300032054	Soil	MINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAFVLLVHAI
Ga0318575_105008181	3300032055	Soil	MINWPEMLCHAEDWANGFWVGAATSSLIAISGAALMLFVHAI
Ga0318533_107675461	3300032059	Soil	MEVAMINWPEMLRHAEDWANGFLAGAATVSLIGVAGAAFVLLVHAI
Ga0318577_103237831	3300032091	Soil	LRNRVVWEPAMINWPEMLCHAEDWANGFWVGAATSSLMAISGAALMLFVHAI
Ga0318577_104932171	3300032091	Soil	MINWPEMLRHAEDWANGFLAGAVTISLIAISGAALMLF
Ga0318540_101935303	3300032094	Soil	WWRNPYSRRFSHHVVMEVAMINWPEMLRHAEDWANGFLAGAVTISLIAISGAALMLFVHA
Ga0306920_1002631812	3300032261	Soil	MLRYAEDWANGFLAGATTVSLIGVAGAAFVLLVHAI
Ga0306920_1004620111	3300032261	Soil	MTNWPEMLRNAEDWAKGFWAGAVTVSLIGIAGAAVVLFVHAI
Ga0306920_1022073712	3300032261	Soil	MINWPEMLHHAEDWANGFLAGATTVSLIGVAGAAF
Ga0310914_115807752	3300033289	Soil	RSLRLQMINWPEMLRRAEDWAKGFWAGAATASLIVIVGAAVALLGHAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F047958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences