NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F048009

Metagenome / Metatranscriptome Family F048009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F048009
Family Type Metagenome / Metatranscriptome
Number of Sequences 149
Average Sequence Length 44 residues
Representative Sequence ELEVAAEMIGEAGDAVEMILTQGIDAAMNKYNRRKPADPEEPEEK
Number of Associated Samples 125
Number of Associated Scaffolds 149

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.70 %
% of genes near scaffold ends (potentially truncated) 94.63 %
% of genes from short scaffolds (< 2000 bps) 90.60 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.329 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.832 % of family members)
Environment Ontology (ENVO) Unclassified
(30.201 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.020 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 149 Family Scaffolds
PF01250Ribosomal_S6 82.55
PF01084Ribosomal_S18 8.05
PF03948Ribosomal_L9_C 2.68
PF01281Ribosomal_L9_N 2.68
PF03796DnaB_C 0.67
PF01195Pept_tRNA_hydro 0.67
PF03551PadR 0.67
PF01168Ala_racemase_N 0.67
PF00772DnaB 0.67

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 149 Family Scaffolds
COG0360Ribosomal protein S6Translation, ribosomal structure and biogenesis [J] 82.55
COG0238Ribosomal protein S18Translation, ribosomal structure and biogenesis [J] 8.05
COG0359Ribosomal protein L9Translation, ribosomal structure and biogenesis [J] 5.37
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 1.34
COG0193Peptidyl-tRNA hydrolaseTranslation, ribosomal structure and biogenesis [J] 0.67
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.67
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.67
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.67
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.67

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.33 %
UnclassifiedrootN/A0.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001154|JGI12636J13339_1032926All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300001356|JGI12269J14319_10348250All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300002245|JGIcombinedJ26739_101350097All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae605Open in IMG/M
3300002562|JGI25382J37095_10239087All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300003351|JGI26346J50198_1006809All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300004091|Ga0062387_100457850All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300004091|Ga0062387_100488533All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300004092|Ga0062389_103320552All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300004114|Ga0062593_103247289All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300004152|Ga0062386_100718880All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005363|Ga0008090_14236855All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia688Open in IMG/M
3300005434|Ga0070709_11020867All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005436|Ga0070713_100583107All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1061Open in IMG/M
3300005436|Ga0070713_100586890All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300005444|Ga0070694_100086119All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2195Open in IMG/M
3300005542|Ga0070732_10664436All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia634Open in IMG/M
3300005555|Ga0066692_10855247All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia558Open in IMG/M
3300005561|Ga0066699_10729943All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005576|Ga0066708_10127707All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1540Open in IMG/M
3300005576|Ga0066708_10924506All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005591|Ga0070761_10210230All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300005602|Ga0070762_10038173All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2604Open in IMG/M
3300005610|Ga0070763_10216429All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300005610|Ga0070763_10740249All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia578Open in IMG/M
3300005719|Ga0068861_101372798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae689Open in IMG/M
3300005921|Ga0070766_10339511All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300006046|Ga0066652_100024384All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4225Open in IMG/M
3300006175|Ga0070712_100247745All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1422Open in IMG/M
3300006797|Ga0066659_10932292All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300006800|Ga0066660_10843523All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300006893|Ga0073928_10000496All Organisms → cellular organisms → Bacteria92532Open in IMG/M
3300006954|Ga0079219_10385124All Organisms → cellular organisms → Bacteria → Acidobacteria921Open in IMG/M
3300006954|Ga0079219_10532777All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300009088|Ga0099830_10524757All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300009143|Ga0099792_10096668All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1543Open in IMG/M
3300009792|Ga0126374_11836005All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300010048|Ga0126373_12174749All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300010048|Ga0126373_12313905All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300010084|Ga0127461_1036742All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300010093|Ga0127490_1083686All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300010322|Ga0134084_10043979All Organisms → cellular organisms → Bacteria → Acidobacteria1294Open in IMG/M
3300010358|Ga0126370_10293974All Organisms → cellular organisms → Bacteria → Acidobacteria1284Open in IMG/M
3300010359|Ga0126376_13064952All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300010361|Ga0126378_13052582All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300010371|Ga0134125_11414802All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300011270|Ga0137391_10544223All Organisms → cellular organisms → Bacteria → Acidobacteria979Open in IMG/M
3300011270|Ga0137391_11479615All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300011271|Ga0137393_10509191All Organisms → cellular organisms → Bacteria → Acidobacteria1033Open in IMG/M
3300011271|Ga0137393_11418863All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300012189|Ga0137388_10021940All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4822Open in IMG/M
3300012189|Ga0137388_11056765All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300012189|Ga0137388_11949687All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300012202|Ga0137363_11538066All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300012205|Ga0137362_10306295All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1375Open in IMG/M
3300012205|Ga0137362_11458465All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300012206|Ga0137380_10039870All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4329Open in IMG/M
3300012210|Ga0137378_11169438All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300012211|Ga0137377_11494758All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300012224|Ga0134028_1075382All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1760Open in IMG/M
3300012361|Ga0137360_10945205All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300012363|Ga0137390_10403627All Organisms → cellular organisms → Bacteria → Acidobacteria1345Open in IMG/M
3300012363|Ga0137390_11580970All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300012582|Ga0137358_10748959All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300012683|Ga0137398_10588094All Organisms → cellular organisms → Bacteria → Acidobacteria769Open in IMG/M
3300012922|Ga0137394_10814361All Organisms → cellular organisms → Bacteria → Acidobacteria782Open in IMG/M
3300012923|Ga0137359_10267799All Organisms → cellular organisms → Bacteria → Acidobacteria1523Open in IMG/M
3300012923|Ga0137359_10619071All Organisms → cellular organisms → Bacteria → Acidobacteria948Open in IMG/M
3300012923|Ga0137359_10624357All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300012924|Ga0137413_11454834All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300012927|Ga0137416_10525143All Organisms → cellular organisms → Bacteria → Acidobacteria1022Open in IMG/M
3300012929|Ga0137404_10445538All Organisms → cellular organisms → Bacteria → Acidobacteria1148Open in IMG/M
3300012944|Ga0137410_10861582All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300012971|Ga0126369_13167850All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300015053|Ga0137405_1086033All Organisms → cellular organisms → Bacteria → Acidobacteria1920Open in IMG/M
3300015053|Ga0137405_1268408All Organisms → cellular organisms → Bacteria → Acidobacteria830Open in IMG/M
3300015264|Ga0137403_10106270All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2811Open in IMG/M
3300017657|Ga0134074_1324585All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300017933|Ga0187801_10100318All Organisms → cellular organisms → Bacteria → Acidobacteria1099Open in IMG/M
3300017934|Ga0187803_10190040All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300017937|Ga0187809_10266812All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae623Open in IMG/M
3300017943|Ga0187819_10100387All Organisms → cellular organisms → Bacteria → Acidobacteria1729Open in IMG/M
3300017970|Ga0187783_10765447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300018019|Ga0187874_10305829All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300018431|Ga0066655_10206409All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1220Open in IMG/M
3300018433|Ga0066667_10161319All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300018433|Ga0066667_11048002All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300019789|Ga0137408_1411063All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2181Open in IMG/M
3300019877|Ga0193722_1134122All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300020579|Ga0210407_10801261All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300020579|Ga0210407_10969836All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300020582|Ga0210395_11243737All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300021046|Ga0215015_11003019All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300021171|Ga0210405_11273388All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300021178|Ga0210408_10206923All Organisms → cellular organisms → Bacteria1561Open in IMG/M
3300021178|Ga0210408_10462507All Organisms → cellular organisms → Bacteria → Acidobacteria1009Open in IMG/M
3300021401|Ga0210393_11065886All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300021401|Ga0210393_11627442All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300021433|Ga0210391_11220743All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300021439|Ga0213879_10253039All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300021478|Ga0210402_10070338All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3095Open in IMG/M
3300021478|Ga0210402_10559668All Organisms → cellular organisms → Bacteria → Acidobacteria1061Open in IMG/M
3300021479|Ga0210410_11222101All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300021559|Ga0210409_11028586All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300022507|Ga0222729_1047199All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300025928|Ga0207700_10448408All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300025986|Ga0207658_10896265All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300026307|Ga0209469_1051011All Organisms → cellular organisms → Bacteria → Acidobacteria1304Open in IMG/M
3300026322|Ga0209687_1006541All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3909Open in IMG/M
3300026376|Ga0257167_1059720All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300026377|Ga0257171_1002022All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2902Open in IMG/M
3300026467|Ga0257154_1058697All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300026532|Ga0209160_1103833All Organisms → cellular organisms → Bacteria → Acidobacteria1434Open in IMG/M
3300026542|Ga0209805_1400091All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300026551|Ga0209648_10525266All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300027565|Ga0209219_1061073All Organisms → cellular organisms → Bacteria → Acidobacteria939Open in IMG/M
3300027643|Ga0209076_1207267All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300027655|Ga0209388_1142308All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300027701|Ga0209447_10191575All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300027727|Ga0209328_10257428All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300027846|Ga0209180_10726101All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300027853|Ga0209274_10173524All Organisms → cellular organisms → Bacteria → Acidobacteria1092Open in IMG/M
3300027855|Ga0209693_10141574All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1189Open in IMG/M
3300027857|Ga0209166_10418703All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300027862|Ga0209701_10282427All Organisms → cellular organisms → Bacteria → Acidobacteria960Open in IMG/M
3300027884|Ga0209275_10031185All Organisms → cellular organisms → Bacteria → Acidobacteria2463Open in IMG/M
3300027884|Ga0209275_10647158All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300027908|Ga0209006_10572879All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300028536|Ga0137415_10981892All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300028906|Ga0308309_10491250All Organisms → cellular organisms → Bacteria → Acidobacteria1060Open in IMG/M
3300030730|Ga0307482_1073562All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300030862|Ga0265753_1094047All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300031231|Ga0170824_110927550All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300031712|Ga0265342_10554944All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300031720|Ga0307469_10673940All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M
3300031720|Ga0307469_12485321All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300031740|Ga0307468_101400612All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300031753|Ga0307477_10130400All Organisms → cellular organisms → Bacteria → Acidobacteria1754Open in IMG/M
3300031754|Ga0307475_11154580All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300031763|Ga0318537_10116933All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae990Open in IMG/M
3300031820|Ga0307473_10772621All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300031962|Ga0307479_10532121All Organisms → cellular organisms → Bacteria → Acidobacteria1158Open in IMG/M
3300031962|Ga0307479_10704442All Organisms → cellular organisms → Bacteria → Acidobacteria988Open in IMG/M
3300032065|Ga0318513_10408737All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300032180|Ga0307471_100961080All Organisms → cellular organisms → Bacteria → Acidobacteria1021Open in IMG/M
3300032180|Ga0307471_103943368All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300032261|Ga0306920_104013636All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300032515|Ga0348332_13495110All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300033547|Ga0316212_1001087All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3613Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.38%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.38%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.70%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.03%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.36%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.01%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.34%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.34%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.67%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.67%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.67%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.67%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.67%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.67%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.67%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.67%
RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Roots0.67%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.67%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.67%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003351Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010084Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026376Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-BEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300033547Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12636J13339_103292623300001154Forest SoilIGEAGDAVEMILTQGIDAAMTKYNRRKQTDPEDSEEPEKK*
JGI12269J14319_1034825023300001356Peatlands SoilEMIGKAGDAVEMILAKEIEPAMNIFNRRKPAEAEEPETE*
JGIcombinedJ26739_10135009713300002245Forest SoilKPELEVASEMLGQVCYAVELILTQGLDAAMTKYNRRRPPETEAEP*
JGI25382J37095_1023908723300002562Grasslands SoilKAELEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPAESEEAEEE*
JGI26346J50198_100680913300003351Bog Forest SoilAAEMIGKAGDAVEMILAKGIEPAMNIFNRRKPEAEEPENE*
Ga0062387_10045785023300004091Bog Forest SoilELEIASEMIAEAADAVEMILQQGFAAAMNKYNRRKQADEGPETPDEK*
Ga0062387_10048853323300004091Bog Forest SoilMKKAELEVASEMVAEAADAVAMILQQGFAAAMNKYNRRKPADEGPETPDE*
Ga0062389_10332055223300004092Bog Forest SoilKKAELEIAAEMLGDAGDAVELILTKGIEAAMNRYNRRKPAESEEPEK*
Ga0062593_10324728913300004114SoilGEMVGEAGDAVEMILANGIDAAMNKFNRRKLPEAEEPEKE*
Ga0062386_10071888023300004152Bog Forest SoilVAAEMIGQAGDAVEMILREGIDAAMNRYNRKSPAAGDAEETK*
Ga0008090_1423685523300005363Tropical Rainforest SoilRPMKKADLQAAAEMVGEAGDAVEMILTQGLDAAMTKYNRRRPAEPE*
Ga0070709_1102086713300005434Corn, Switchgrass And Miscanthus RhizosphereIAAEMLDEAGNAVEAILTEGIDAAMTKFNRRKPSEDEAPGL*
Ga0070713_10058310733300005436Corn, Switchgrass And Miscanthus RhizosphereAELEAAAEMLDEAGDAVETILKEGIDAAMTKFNRRKQAEGEET*
Ga0070713_10058689033300005436Corn, Switchgrass And Miscanthus RhizosphereELEIAAEMLDEAGNAVEAILTEGIDAAMTKFNRRKPSEDEAPGL*
Ga0070694_10008611953300005444Corn, Switchgrass And Miscanthus RhizosphereLEVATEMLAEAGDAVELILTQGLDAAMTKYNRRKLTEDAAE*
Ga0070732_1066443623300005542Surface SoilNSRREHVLRPVRKPELELAAEMIDEAGNAVEVILKEGLDAAMNKFNRRKPTEGEAET*
Ga0066692_1085524713300005555SoilRPMKKPELEVAAEMVGEAGNAVEMILAQGLDAAMTKYNRRKPAEPDDPV*
Ga0066699_1072994323300005561SoilEAGDAVEMILTQGLDAAMTKYNRRKPADVEEPEEK*
Ga0066708_1012770713300005576SoilLRPMKKAELEVAAEMIGEAGDAVEMILTQGLDATMTKYNRRKPADVEEPEEK*
Ga0066708_1092450623300005576SoilNAELEVAAEMLGEAGDAVEMILTQGLDAAMTKYNRRKLTEDEAE*
Ga0070761_1021023013300005591SoilEAAEMIGKAGDAVEMILAKGIESAMNIFNRRKPPDPEADGPEGL*
Ga0070762_1003817353300005602SoilPMKKAELEEAAEMIGKAGDAVEMMLAKGIEPAMNIFNRRKLPEAEEPEEE*
Ga0070763_1021642913300005610SoilEMLGQVGDAVELILTQGLDAAMTKYNRRKPQEPEEEK*
Ga0070763_1074024913300005610SoilMRKAELEVAAEMIAEAADAAEMIVAQGIDAAMNRYNRRKEPPVDETET*
Ga0068861_10137279813300005719Switchgrass RhizosphereLRPMKKAELEVATEMLAEAGDAVELILTQGLDAAMTKYNRRKLTEDAAE*
Ga0070766_1033951133300005921SoilAAEMVGKAGDAVEMILEKGIEPAMNIFNRRKPEAEESGEE*
Ga0066652_10002438463300006046SoilAVEMILTQGLHAAMTKYNRRRLAEPEQPEQPEQK*
Ga0070712_10024774513300006175Corn, Switchgrass And Miscanthus RhizosphereNAAEMLEQAGDAVELILTQGLDAAMNKYNRRKPSDPDATP*
Ga0066659_1093229213300006797SoilSGEAGDAVEMILTQGLDAAMTKYNRRKPEDPEEAEEK*
Ga0066660_1084352313300006800SoilAELEVAAEMIGEAGDAVEMILTQGLDAAMTKYNRRKPADVEEPEEK*
Ga0073928_10000496983300006893Iron-Sulfur Acid SpringMRKGELEVASEMIAEAADAVEVMVAKGIDAAMNKYNRRKEPPADEASE*
Ga0079219_1038512423300006954Agricultural SoilKEHVLRRMKKAELEAAAEMVGEAGDAVEIILTQSLDAAMTKFNRRKPAEPEDET*
Ga0079219_1053277713300006954Agricultural SoilEAAAEMVGEAGDAVEMILTQGLDAAMTKYNRRKPTEPEEAV*
Ga0099830_1052475743300009088Vadose Zone SoilGQAGDAVEMILAQGIDAAMNKYNRRKPAEPEEPEEPEKE*
Ga0099792_1009666813300009143Vadose Zone SoilMIGEAGDAVEMILSQGLDAAMTKYNRRKPSEPEEPEEK*
Ga0126374_1183600523300009792Tropical Forest SoilRKAELEVAAEMLDEAGNAVEMILKEGIDAAMTRFNRRKPGAAAEGEAM*
Ga0126373_1217474913300010048Tropical Forest SoilAELEAAAEMVAEAVDAVEMILKQGLDGAMTKYNRRKPAEPPEPET*
Ga0126373_1231390523300010048Tropical Forest SoilELEVAAEMLGEAGDAVEMILTQGLDAAMTKYNRRKPPEPEDPEEPVKK*
Ga0127461_103674213300010084Grasslands SoilELEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPAESEEAEEE*
Ga0127490_108368623300010093Grasslands SoilEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPAESEEAEEE*
Ga0134084_1004397933300010322Grasslands SoilIGEAGDAVDMILTQGLDAAMTKYNRRKPADVEEPEEK*
Ga0126370_1029397433300010358Tropical Forest SoilEVAAEMVGEAGDAVEMILAQGLDAAMTKYNRRKLAGPEEPV*
Ga0126376_1306495223300010359Tropical Forest SoilMRKAELEVAAEMIADAGDAVELLLSKGIQAAMNRYNRRELVDGEGLPGE*
Ga0126378_1305258223300010361Tropical Forest SoilKKAELQAASEMIADAGDAVEMILSQGLDAAMTKYNRRKPPQEEEPEEPKKK*
Ga0134125_1141480223300010371Terrestrial SoilEMLAEAGDAVELILTQGLDAAMTKYNRRKLTEDAAE*
Ga0137391_1054422333300011270Vadose Zone SoilRKVELEAAAEMIDEAGNAVETILQEGIDAAMNKFNRRKPIEGEANL*
Ga0137391_1147961523300011270Vadose Zone SoilGEAGDAVEIILSQGLDAAMTKYNRRKPEEPEEPV*
Ga0137393_1050919113300011271Vadose Zone SoilAELEVAAEMIGEAGDAVEMILAQGIDAAMNKYNRRKPADPEEPEEK*
Ga0137393_1141886313300011271Vadose Zone SoilGEAGDAVEMILSQGLDAAMTKYNRRKPEEPEEPV*
Ga0137388_1002194013300012189Vadose Zone SoilLEVAAEMIGEAGDAVEMSLSQGLDAAMTKYNRRKPAEPEEPEEPEEE*
Ga0137388_1105676523300012189Vadose Zone SoilEVAAEMIGEAGDAVEMILTQGIDAAMTKYNRRKPADPEELEEK*
Ga0137388_1194968713300012189Vadose Zone SoilMRKAELEVAAEMIDEAGNAVVKILQEGLDAAMNKFNRSKPTEGEADV*
Ga0137363_1153806623300012202Vadose Zone SoilRPMRKAQLKIASEMIDEAGNAVETILQEGIDAAMNKFNRRKPTEGETDL*
Ga0137362_1030629533300012205Vadose Zone SoilREYVLRRMKKTELEIAAEMLDEAGNAVETVLKEGIDAAMTRFNRRKPVDGEPVG*
Ga0137362_1145846513300012205Vadose Zone SoilAGDAVEMILSQGLDAAMTKYNRRKPAEPEEPEEPEEK*
Ga0137380_1003987013300012206Vadose Zone SoilELEAAAEMISEAGDAVEMILTQGIDAAMTKYNRRKPADAEEPEEK*
Ga0137378_1116943823300012210Vadose Zone SoilPMKKAELEAAAEMISEAGDAVEMILTQGIDAAMTKYNRRKLTEPEEPDEPGQR*
Ga0137377_1149475813300012211Vadose Zone SoilEMIGEAGDAVEMILSQGIDAAMTKYNRRKPADPEEPEEK*
Ga0134028_107538213300012224Grasslands SoilMNKAELEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPAESEEAEEE*
Ga0137360_1094520513300012361Vadose Zone SoilDAVEMILSQGFDAAMTKYNRRKPSEPEEPEEPEEK*
Ga0137390_1040362743300012363Vadose Zone SoilAEMIGEAGDAVEMILTQGIDAAMTKYNRRKPADPEEQEEK*
Ga0137390_1158097013300012363Vadose Zone SoilIAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPAEPEEPEEK*
Ga0137358_1074895913300012582Vadose Zone SoilAGDAVEMILTQGIDAAMNKYNRRKPADPEEPEEK*
Ga0137398_1058809423300012683Vadose Zone SoilRPMKKAELEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPADAEEQLEK*
Ga0137394_1081436133300012922Vadose Zone SoilAELEIAAEMIGEAGDAVEMILKQGIDAAMNQYNRRKVAESEEPEEK*
Ga0137359_1026779913300012923Vadose Zone SoilKKAELEVAAEMLDEAGNAVEMILKEGLDAAMTKYNRRKPSEAEGESL*
Ga0137359_1061907113300012923Vadose Zone SoilEMIDEAGNAVETILQEGIDAAMNKFNRRKPTEGETDL*
Ga0137359_1062435723300012923Vadose Zone SoilMKKADLEVAAEMLDEAGNAVEMILKEGIDAAMTKFNRRKQADGEAEAET*
Ga0137413_1145483413300012924Vadose Zone SoilLEVAAEMIGEAGDAVEMILSQGLEAAMTKYNRRKPADPEEAEEK*
Ga0137416_1052514333300012927Vadose Zone SoilLEVAAEMIAEAGDAVEMILSQGLDAAMTKYNRRKPEEPEEAEEK*
Ga0137404_1044553813300012929Vadose Zone SoilVAAEMIGEAGDAVEMILTQGLDAAMTKYNRRKPLEPEEPEET*
Ga0137410_1086158213300012944Vadose Zone SoilEMIGEAGDAVEMILTQGLDAAMTKYNRRKPLEPEEPEEK*
Ga0126369_1316785013300012971Tropical Forest SoilMIGQAGDAVEMILTKGIDAAMNKYNRREPPPTDEESGTAEK*
Ga0137405_108603313300015053Vadose Zone SoilMRKAELEVAAEMIGQAGDAVELILTKGIDAAMTKYNRRESPPAAEENL*
Ga0137405_126840813300015053Vadose Zone SoilMRKAELEAASEMIGNAGDAVELILSQGIEAAMTKYNRRKPADPEEPEL*
Ga0137403_1010627073300015264Vadose Zone SoilKKAELEIAAEMIGEAGDAVEMILKQGIDAAMNQYNRRKAAESEEPEEK*
Ga0134074_132458513300017657Grasslands SoilMIGEAGDAVEMILTQGLDAAMTKYNRRKPPSGEEPEDPV
Ga0187801_1010031813300017933Freshwater SedimentMIGEAGDAVEMILTQGFDAAMTKYNRRKPLDPEEAEEK
Ga0187803_1019004013300017934Freshwater SedimentELEVAAEMIGEAGDAVEMILTQGIDAAMNKYNRRKPAEEAPGDAPD
Ga0187809_1026681213300017937Freshwater SedimentEMLGQVGDAVELILTQGLDAAMTKYNRRKPQEPDDEK
Ga0187819_1010038713300017943Freshwater SedimentVAAEMIGEAGDAVEMILTQGLDAAMTKYNRRKPEPEEPEEK
Ga0187783_1076544723300017970Tropical PeatlandMRKAELEVAAEMIGKAGDAVEMILEKGIEPAMNVFNRRKPPEPEADAPGK
Ga0187874_1030582913300018019PeatlandLEVASEMIGEAGDAVELMLAQGIDAAMTKYNRRKPLDAEE
Ga0066655_1020640933300018431Grasslands SoilEAGDAVEMILTQGLDKAMTKYNRRMPDEPGESEQN
Ga0066667_1016131913300018433Grasslands SoilEVAAEMIGEAGDAVEMILTQGLDAAMTKYNRRKPADVEEPEEK
Ga0066667_1104800223300018433Grasslands SoilAELEVAAEMLGEAGDAVEMILTQGLDAAMTKYNRRKLTEDEAE
Ga0137408_141106313300019789Vadose Zone SoilVLRPIKKAELEIAAEMIGEAGDAVEMILRQGIDAAMNQYNRRKVAESEEPEKK
Ga0193722_113412213300019877SoilELVAASEMIAEAADAVEMILRDGIDAAMNRYNRRKEPPGETDEPEKK
Ga0210407_1080126113300020579SoilELEVAAEMIGEAGDAVEMILTQGIDAAMNKYNRRKPADPEEPEEK
Ga0210407_1096983623300020579SoilAAEMLDEAGNAVEMILQEGLDAAMTKFNRRKPAEGEAET
Ga0210395_1124373713300020582SoilAAEMIGEAGDAVELILTQGLDAAMTKFNRRKQEPDGPEAET
Ga0210401_1071476133300020583SoilRPMKKAELEVAAEMVATAGDAVEMILSQSIASAMNKYNRRMPPPPEEK
Ga0215015_1100301923300021046SoilAELEAAAEMIGEVGDAVEMILSQGLDAAMTKYNRRKPADPEEPEEK
Ga0210405_1127338813300021171SoilAEMVGKAGDAVEMILAKGIEPAMNIFNRRKPEVEEPETD
Ga0210408_1020692343300021178SoilKAELEVAAEMIGEAGDAVEMILKQGIEAAMNKYNRRKPAQEEPL
Ga0210408_1046250713300021178SoilAELEVAAEMIDEAGNAVEVILKEGLDAAMNKFNRRKPVEGEAET
Ga0210393_1106588623300021401SoilKAELEIAAEMIDEAGNAVEVILKEGLDAAMNKFNRRKPVEGEAET
Ga0210393_1162744223300021401SoilRPMKKPELEAASEMVAQAGDAVEMILQQGLAAAMNKYNRKAPPPDPAAES
Ga0210391_1122074323300021433SoilAELEVASEMIGEAGDAVELILSQGIEAAMNKFNRRKPPDPEP
Ga0213879_1025303923300021439Bulk SoilKAELEVASEMLEHVGDAVELILTHGLDAAMTKYNRRKPEEPEAEK
Ga0210402_1007033853300021478SoilEAGDAVEMILSQGLDAAMTKYNRRKPADPEEAEEK
Ga0210402_1055966813300021478SoilAELEIASEMIDEAGNAVETILQEGIDAAMNKFNRRKPTEGETDL
Ga0210410_1122210113300021479SoilKAALEVAAEMVGKAGDAVEMILEKGIEPAMNIFNRRKLPEAEERQNE
Ga0210409_1102858623300021559SoilAEMIGEAGDAVEMILKQGIDAAMNKYNRRKPADPEEPEEK
Ga0222729_104719923300022507SoilIGKAGDAVEMILAKGIEPAMNIFNRRKPEAEETEED
Ga0207700_1044840813300025928Corn, Switchgrass And Miscanthus RhizosphereKAELEAAAEMLDEAGDAVETILKEGIDAAMTKFNRRKQAEGEET
Ga0207658_1089626533300025986Switchgrass RhizosphereKAELEVATEMLAEAGDAVELILTQGLDAAMTKYNRRKLTEDATE
Ga0209469_105101123300026307SoilMKKAELEAAAEMVGEAGDAVEMILTQGLHAAMTKYNRRRLAEPEQPEQPEQK
Ga0209687_100654113300026322SoilLRPMKKAELEAAAEMVGEAGDAVEMILTQGLDKAMTKYNRRMPDEPGESEQN
Ga0257167_105972013300026376SoilEAAAEMIGEAGDAVELILSQGIDAAMTKYNRRKPAEPEEPEEE
Ga0257171_100202263300026377SoilAELVIASEMIGEAGDAVEMILKQGIDAAMNQYNRRKAAESEEPEEK
Ga0257154_105869723300026467SoilKKAELEVAAEMVAKAGDAVEMILEKGIEPAMNIFNRRKLPEAEEPGNE
Ga0209160_110383343300026532SoilIASEMIGEAGDAVEMILSQGLDAAMTKYNRRKPSEPEEPEEK
Ga0209805_140009113300026542SoilAELETAAEMIGEAGDAVEMILTQGLDAAMTKYNRRKPPSGEEPEDPV
Ga0209648_1052526613300026551Grasslands SoilKAELEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPSEPEELEEK
Ga0209219_106107313300027565Forest SoilVLRPMKKPELEEAAAMVGKAGDAAEMILAKGIEQAMNIFNRRKLPEAEEPEKE
Ga0209076_120726723300027643Vadose Zone SoilASEMIGEAGDAVEMILKQGIDAAMNQYNRRKAAESEGPEEK
Ga0209388_114230823300027655Vadose Zone SoilAAEMIGEAGDAVEMILKQGIDAAMNQYNRRKAAESEEPEEK
Ga0209447_1019157513300027701Bog Forest SoilAEMVGKAGDAVEMILAKGIEPAMNIFNRRKPPDAEEPEEE
Ga0209328_1025742823300027727Forest SoilELEVAAEMIGEAGDAVEMILTQGIDAAMNKYNRRKPADPEEPEEE
Ga0209180_1072610123300027846Vadose Zone SoilKKAELEIAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPSEPEEPEEK
Ga0209274_1017352433300027853SoilKAELAEAAEMIGKAGDAVEMILAKGIESAMNIFNRRKPPDPEADGPEGL
Ga0209693_1014157413300027855SoilEMLGQVGDAVELILTQGLDAAMTKYNRRKPQEPEEEK
Ga0209166_1041870313300027857Surface SoilMKKAELEIAAEMLDEAGNAVETILKEGIAAAMTKFNRRKPVEGEAEL
Ga0209701_1028242733300027862Vadose Zone SoilAGDAVEMILAQGIDAAMNKYNRRKPAEPEEPEEPEKE
Ga0209275_1003118513300027884SoilLRPMKKAELEEAAEMIGKAGDAVEMMLAKGIEPAMNIFNRRKLPEAEEPEEE
Ga0209275_1064715813300027884SoilEVASEMLGQVGDAVELILTQGLDAAMTKYNRRKPLDPDVEQ
Ga0209006_1057287933300027908Forest SoilKKPELEVASEMLGQVCYAVELILTQGLDAAMTKYNRRRPPETEAEP
Ga0137415_1098189223300028536Vadose Zone SoilRPMKKAELEAAAKMIGEAGDAVEMILSQGIDAAMTKYNRRKPAEPEEPEEK
Ga0308309_1049125033300028906SoilMKKAELEVASEMLGHVGDAVEMILTQGLDAAMTKYNRRKPPDAEAV
Ga0307482_107356213300030730Hardwood Forest SoilKKAELEVAAEMLDEAGNAVEVILKEWLDAAMTRFNRRKPAAEGEPET
Ga0265753_109404713300030862SoilAEMIGKAGDAVEMILAKGIEPAMNIFNRRKPEVEEPEEE
Ga0170824_11092755023300031231Forest SoilKKAVLEVAAEMIGEAGDAVEMILSQGLDAAMTKYNRRKPSEPEEQ
Ga0265342_1055494423300031712RhizosphereAEMIATAANAVELMLKEGIDAAMNQYNRRKPPDEPGQE
Ga0307469_1067394013300031720Hardwood Forest SoilLEIAAEMLDEAGNAVETILKEGIDAAMTKFNRRKPVDGEGDL
Ga0307469_1248532123300031720Hardwood Forest SoilHVLRPMRKAELEVAAEMIDEAGNAVETILREGIDAAMNKFNRRKPVEGEADL
Ga0307468_10140061213300031740Hardwood Forest SoilEMLGEAGDAVELILTQGLEAAMTKYNRRKTAESADEAE
Ga0307477_1013040013300031753Hardwood Forest SoilMIDEAGNAVEVILKEGLDAAMNKFNRRKPAEGEAET
Ga0307475_1115458013300031754Hardwood Forest SoilKKAELGVAAEMIGEAGDAVEMILTHGLDAAMTKYNRRKPADPEEPEEK
Ga0318537_1011693333300031763SoilKKTELEAAAEMVGEAGDAVEMILMQGLHAAMTKYNRRRPDEPDQAEPK
Ga0307473_1077262123300031820Hardwood Forest SoilELAVAAEMIADAADGVEMVLGKGIDAAMNKYNRRKPSEEEAEEKK
Ga0307479_1053212113300031962Hardwood Forest SoilELEVASEMIAEAADAVEMIVAQGIEAAMTKYNRRKEPPADETEE
Ga0307479_1070444213300031962Hardwood Forest SoilEAGDAVEMILSKGIDAAMNKYNRRKPSEDAGEEKQ
Ga0318513_1040873723300032065SoilPMKKTELEAAAEMVGEAGDAVEMILMQGLHAAMTKYNRRRPDEPDQAEPK
Ga0307471_10096108013300032180Hardwood Forest SoilAELEVAAEMIDEAGNAVEVILKEGLDAAMNKFNRRKPAESEAET
Ga0307471_10394336813300032180Hardwood Forest SoilKKAELEIAAEMIGDAGDAVEMILKQGIDAAMNQYNRRKAAESEEPEEK
Ga0306920_10401363613300032261SoilAAEMIDQAGNAVETILKEGLDAAMTKFNRRRSAEDEATEL
Ga0348332_1349511013300032515Plant LitterELEVAAEMIGKAGDAVEMILESGIEPAMNIFNRRKLPEAEEPQNG
Ga0316212_100108753300033547RootsLRPMKKAELEVASEMVAEAGDAVEMILRQGFAAAMNKYNRKKPSEASETEEGK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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