Metagenome / Metatranscriptome Family F048060

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048060
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	52 residues
Representative Sequence	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLAEWKARKGAP
Number of Associated Samples	57
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.35 %
% of genes near scaffold ends (potentially truncated)	18.24 %
% of genes from short scaffolds (< 2000 bps)	71.62 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (60.811 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion (24.324 % of family members)
Environment Ontology (ENVO)	Unclassified (62.162 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.081 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.50% β-sheet: 0.00% Coil/Unstructured: 42.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00589	Phage_integrase	6.08
PF12728	HTH_17	3.38
PF00005	ABC_tran	1.35
PF06725	3D	0.68
PF05239	PRC	0.68
PF06418	CTP_synth_N	0.68
PF00155	Aminotran_1_2	0.68
PF06074	DUF935	0.68
PF14607	GxDLY	0.68
PF05168	HEPN	0.68
PF01751	Toprim	0.68
PF03237	Terminase_6N	0.68
PF13385	Laminin_G_3	0.68
PF02826	2-Hacid_dh_C	0.68
PF09335	SNARE_assoc	0.68
PF01936	NYN	0.68
PF13657	Couple_hipA	0.68
PF13146	TRL	0.68
PF00692	dUTPase	0.68
PF06969	HemN_C	0.68
PF03602	Cons_hypoth95	0.68
PF00218	IGPS	0.68
PF08447	PAS_3	0.68
PF12833	HTH_18	0.68
PF02585	PIG-L	0.68
PF13306	LRR_5	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.68
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	0.68
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.68
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.68
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.68
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.68
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.68
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.68
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	0.68
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.68
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.68
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.68
COG4383	Mu-like prophage protein gp29	Mobilome: prophages, transposons [X]	0.68
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.68
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.68
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	0.68
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG0635	Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase	Coenzyme transport and metabolism [H]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
All Organisms	root	All Organisms	39.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
cellular organisms	root	All Organisms → cellular organisms	36.49 %
Viruses	superkingdom	All Organisms → Viruses	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.49 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	12.16 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	6.76 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.35 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	6.08 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.70 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.35 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.81 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	6.08 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.70 %
Verrucomicrobia bacterium ADurb.Bin070	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin070	1.35 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2042536000\|LandsortDeep1200_GCH9ZVC01B9KTW	Not Available	505	Open in IMG/M
2088090007\|LWFCAnN_GO09JKT01C7MH3	Not Available	524	Open in IMG/M
2088090007\|LWFCAnN_GO09JKT01EOG8R	Not Available	556	Open in IMG/M
3300004693\|Ga0065167_1030337	Not Available	860	Open in IMG/M
3300004693\|Ga0065167_1065495	Not Available	612	Open in IMG/M
3300004774\|Ga0007794_10025298	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300004774\|Ga0007794_10064814	Not Available	1088	Open in IMG/M
3300004774\|Ga0007794_10237187	Not Available	542	Open in IMG/M
3300004776\|Ga0007800_10139907	Not Available	594	Open in IMG/M
3300004805\|Ga0007792_10019147	Not Available	2082	Open in IMG/M
3300004805\|Ga0007792_10042053	Not Available	1384	Open in IMG/M
3300004805\|Ga0007792_10049143	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300004805\|Ga0007792_10052950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin070	1230	Open in IMG/M
3300004805\|Ga0007792_10089405	Not Available	939	Open in IMG/M
3300004805\|Ga0007792_10181524	Not Available	647	Open in IMG/M
3300009175\|Ga0073936_10002235	All Organisms → cellular organisms → Bacteria	28979	Open in IMG/M
3300009175\|Ga0073936_10002758	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	25876	Open in IMG/M
3300009175\|Ga0073936_10004545	All Organisms → cellular organisms → Bacteria	19172	Open in IMG/M
3300009175\|Ga0073936_10006023	All Organisms → cellular organisms → Bacteria	16129	Open in IMG/M
3300009175\|Ga0073936_10006148	All Organisms → cellular organisms → Bacteria	15942	Open in IMG/M
3300009175\|Ga0073936_10033288	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	5177	Open in IMG/M
3300009175\|Ga0073936_10038669	All Organisms → cellular organisms → Bacteria	4657	Open in IMG/M
3300009175\|Ga0073936_10129439	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1959	Open in IMG/M
3300009175\|Ga0073936_10179799	Not Available	1534	Open in IMG/M
3300009175\|Ga0073936_10212773	Not Available	1352	Open in IMG/M
3300009175\|Ga0073936_10276881	Not Available	1108	Open in IMG/M
3300009175\|Ga0073936_10298313	Not Available	1048	Open in IMG/M
3300009175\|Ga0073936_10385472	Not Available	866	Open in IMG/M
3300009175\|Ga0073936_10386523	Not Available	864	Open in IMG/M
3300009175\|Ga0073936_10771907	Not Available	524	Open in IMG/M
3300009362\|Ga0118673_1183790	Not Available	523	Open in IMG/M
3300009502\|Ga0114951_10043152	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	2774	Open in IMG/M
3300009502\|Ga0114951_10086285	Not Available	1809	Open in IMG/M
3300009502\|Ga0114951_10284348	Not Available	855	Open in IMG/M
3300009502\|Ga0114951_10383705	Not Available	704	Open in IMG/M
3300009502\|Ga0114951_10404274	Not Available	680	Open in IMG/M
3300009502\|Ga0114951_10492748	Not Available	599	Open in IMG/M
3300009502\|Ga0114951_10541383	Not Available	564	Open in IMG/M
3300009607\|Ga0123327_1267020	Not Available	543	Open in IMG/M
3300009656\|Ga0123329_1177000	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009659\|Ga0123328_1175755	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300009715\|Ga0116160_1125684	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1070	Open in IMG/M
3300009770\|Ga0123332_1057161	All Organisms → cellular organisms → Bacteria → PVC group	1998	Open in IMG/M
3300010293\|Ga0116204_1061423	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1371	Open in IMG/M
3300010319\|Ga0136653_10388334	Not Available	615	Open in IMG/M
3300013086\|Ga0163202_1069588	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300013088\|Ga0163200_1221668	Not Available	589	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10019819	All Organisms → cellular organisms → Bacteria	7784	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10055851	All Organisms → cellular organisms → Bacteria	3775	Open in IMG/M
3300014498\|Ga0182019_11220919	Not Available	553	Open in IMG/M
3300014498\|Ga0182019_11478152	Not Available	506	Open in IMG/M
3300014502\|Ga0182021_11348913	Not Available	859	Open in IMG/M
3300014502\|Ga0182021_11935801	Not Available	710	Open in IMG/M
3300014502\|Ga0182021_13027457	Not Available	563	Open in IMG/M
3300014839\|Ga0182027_11304542	Not Available	724	Open in IMG/M
3300020074\|Ga0194113_10002195	All Organisms → cellular organisms → Bacteria	26837	Open in IMG/M
3300020083\|Ga0194111_10441154	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	851	Open in IMG/M
3300020083\|Ga0194111_10455491	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300020708\|Ga0214228_1025607	Not Available	632	Open in IMG/M
3300021070\|Ga0194056_10223661	Not Available	650	Open in IMG/M
3300022526\|Ga0224533_1067956	Not Available	590	Open in IMG/M
3300022526\|Ga0224533_1069089	Not Available	584	Open in IMG/M
3300022526\|Ga0224533_1080428	Not Available	537	Open in IMG/M
3300022553\|Ga0212124_10115308	All Organisms → cellular organisms → Bacteria → PVC group	1501	Open in IMG/M
3300022555\|Ga0212088_10010715	All Organisms → cellular organisms → Bacteria	14558	Open in IMG/M
3300022555\|Ga0212088_10011616	All Organisms → cellular organisms → Bacteria	13698	Open in IMG/M
3300022555\|Ga0212088_10013931	All Organisms → cellular organisms → Bacteria	11950	Open in IMG/M
3300022555\|Ga0212088_10017948	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	9871	Open in IMG/M
3300022555\|Ga0212088_10024701	All Organisms → cellular organisms → Bacteria	7730	Open in IMG/M
3300022555\|Ga0212088_10027224	All Organisms → cellular organisms → Bacteria	7165	Open in IMG/M
3300022555\|Ga0212088_10036420	All Organisms → cellular organisms → Bacteria → PVC group	5732	Open in IMG/M
3300022555\|Ga0212088_10063673	All Organisms → cellular organisms → Bacteria → PVC group	3758	Open in IMG/M
3300022555\|Ga0212088_10065633	All Organisms → cellular organisms → Bacteria → PVC group	3671	Open in IMG/M
3300022555\|Ga0212088_10131534	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	2175	Open in IMG/M
3300022555\|Ga0212088_10131686	Not Available	2173	Open in IMG/M
3300022555\|Ga0212088_10252179	Not Available	1329	Open in IMG/M
3300022555\|Ga0212088_10321614	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300022555\|Ga0212088_10324577	Not Available	1093	Open in IMG/M
3300022555\|Ga0212088_10410423	Not Available	912	Open in IMG/M
3300022555\|Ga0212088_10461140	Not Available	833	Open in IMG/M
3300022555\|Ga0212088_10503998	Not Available	778	Open in IMG/M
3300022555\|Ga0212088_10520042	Not Available	759	Open in IMG/M
3300022555\|Ga0212088_10670917	Not Available	623	Open in IMG/M
3300022555\|Ga0212088_10717065	Not Available	592	Open in IMG/M
3300022556\|Ga0212121_10774574	Not Available	584	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10003007	All Organisms → cellular organisms → Bacteria	31750	Open in IMG/M
(restricted) 3300024300\|Ga0233420_10337748	Not Available	520	Open in IMG/M
(restricted) 3300024333\|Ga0233422_10167140	Not Available	860	Open in IMG/M
3300025115\|Ga0209835_1152607	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	559	Open in IMG/M
3300025162\|Ga0209083_1053637	Not Available	1726	Open in IMG/M
3300025316\|Ga0209697_10024916	All Organisms → cellular organisms → Bacteria	5392	Open in IMG/M
3300025476\|Ga0208495_1070826	Not Available	622	Open in IMG/M
3300025595\|Ga0208248_1040822	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025595\|Ga0208248_1057300	Not Available	881	Open in IMG/M
3300025616\|Ga0208613_1021684	Not Available	1573	Open in IMG/M
3300025616\|Ga0208613_1076844	Not Available	760	Open in IMG/M
3300028156\|Ga0268281_1004185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6100	Open in IMG/M
3300028156\|Ga0268281_1006191	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300028178\|Ga0265593_1142736	Not Available	618	Open in IMG/M
3300028178\|Ga0265593_1181097	Not Available	530	Open in IMG/M
3300028283\|Ga0268283_1177853	Not Available	585	Open in IMG/M
3300028283\|Ga0268283_1181469	Not Available	578	Open in IMG/M
3300028283\|Ga0268283_1218750	Not Available	513	Open in IMG/M
3300028623\|Ga0257141_1036396	Not Available	939	Open in IMG/M
3300029798\|Ga0239581_1061308	Not Available	823	Open in IMG/M
3300029798\|Ga0239581_1062798	Not Available	809	Open in IMG/M
3300029953\|Ga0311343_11402064	Not Available	521	Open in IMG/M
3300031238\|Ga0265332_10280815	Not Available	688	Open in IMG/M
3300031712\|Ga0265342_10318496	Not Available	816	Open in IMG/M
3300032173\|Ga0315268_12352889	Not Available	547	Open in IMG/M
3300032561\|Ga0316222_1178349	Not Available	768	Open in IMG/M
3300032562\|Ga0316226_1001149	All Organisms → cellular organisms → Bacteria	30352	Open in IMG/M
3300032562\|Ga0316226_1005768	All Organisms → cellular organisms → Bacteria	9279	Open in IMG/M
3300032562\|Ga0316226_1007915	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	7405	Open in IMG/M
3300032562\|Ga0316226_1008436	All Organisms → cellular organisms → Bacteria	7095	Open in IMG/M
3300032562\|Ga0316226_1020920	All Organisms → cellular organisms → Bacteria	3826	Open in IMG/M
3300032562\|Ga0316226_1021687	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	3734	Open in IMG/M
3300032562\|Ga0316226_1029665	All Organisms → cellular organisms → Bacteria	3047	Open in IMG/M
3300032562\|Ga0316226_1049940	Not Available	2172	Open in IMG/M
3300032562\|Ga0316226_1074174	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1668	Open in IMG/M
3300032562\|Ga0316226_1076922	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300032562\|Ga0316226_1083005	Not Available	1546	Open in IMG/M
3300032562\|Ga0316226_1089023	Not Available	1473	Open in IMG/M
3300032562\|Ga0316226_1143404	Not Available	1055	Open in IMG/M
3300032562\|Ga0316226_1148469	Not Available	1030	Open in IMG/M
3300032562\|Ga0316226_1149735	Not Available	1024	Open in IMG/M
3300032562\|Ga0316226_1159850	Not Available	977	Open in IMG/M
3300032562\|Ga0316226_1206092	Not Available	814	Open in IMG/M
3300032562\|Ga0316226_1234675	Not Available	741	Open in IMG/M
3300032562\|Ga0316226_1239552	Not Available	730	Open in IMG/M
3300032562\|Ga0316226_1240243	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	728	Open in IMG/M
3300032562\|Ga0316226_1270033	Not Available	669	Open in IMG/M
3300032605\|Ga0316232_1149764	Not Available	985	Open in IMG/M
3300032605\|Ga0316232_1215704	Not Available	762	Open in IMG/M
3300032668\|Ga0316230_1284345	Not Available	551	Open in IMG/M
3300032676\|Ga0316229_1024979	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	3017	Open in IMG/M
3300032676\|Ga0316229_1087174	Not Available	1358	Open in IMG/M
3300032676\|Ga0316229_1194376	Not Available	795	Open in IMG/M
3300032676\|Ga0316229_1207207	Not Available	760	Open in IMG/M
3300032676\|Ga0316229_1222406	Not Available	724	Open in IMG/M
3300033979\|Ga0334978_0473858	Not Available	585	Open in IMG/M
3300033980\|Ga0334981_0003738	All Organisms → cellular organisms → Bacteria	9446	Open in IMG/M
3300034062\|Ga0334995_0020240	All Organisms → cellular organisms → Bacteria	5948	Open in IMG/M
3300034062\|Ga0334995_0027639	All Organisms → cellular organisms → Bacteria	4935	Open in IMG/M
3300034062\|Ga0334995_0034795	All Organisms → cellular organisms → Bacteria	4281	Open in IMG/M
3300034101\|Ga0335027_0043754	All Organisms → cellular organisms → Bacteria	3662	Open in IMG/M
3300034101\|Ga0335027_0169005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin070	1585	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.59%
Engineered	Engineered	4.05%
Host-Associated	Host-Associated	1.35%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	87.84%
Terrestrial	Environmental → Terrestrial	6.76%
Bioreactor	Engineered → Bioreactor	2.70%
Plants	Host-Associated → Plants	1.35%
Wastewater	Engineered → Wastewater	1.35%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.76%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.73%
Soil	Environmental → Terrestrial → Soil	4.05%
Peat	Environmental → Terrestrial → Peat	2.70%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.70%
Marine	Environmental → Aquatic → Marine	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.35%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.35%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	47.30%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.46%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.70%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.70%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	46.62%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	20.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.51%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.70%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.35%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.68%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.68%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.68%

Habitat	Taxonomy	Distribution
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	24.32%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	20.95%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	12.16%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.14%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.41%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	4.73%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.05%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	2.70%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	2.70%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.03%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Sediment	1.35%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.35%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.68%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.68%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.68%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2042536000	400 m water depth	Environmental	Open in IMG/M
2088090007	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - from flow sorted anaerobic plus nitrate	Environmental	Open in IMG/M
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004776	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010319	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaG	Environmental	Open in IMG/M
3300013086	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m	Environmental	Open in IMG/M
3300013088	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020708	Freshwater microbial communities from Trout Bog Lake, WI - 05NOV2007 hypolimnion	Environmental	Open in IMG/M
3300021070	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13m	Environmental	Open in IMG/M
3300022526	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 10-14	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300024054 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG	Environmental	Open in IMG/M
3300024300 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_102_MG	Environmental	Open in IMG/M
3300024333 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_110_MG	Environmental	Open in IMG/M
3300025115	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG (SPAdes)	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025476	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M (SPAdes)	Environmental	Open in IMG/M
3300025595	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)	Environmental	Open in IMG/M
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental	Open in IMG/M
3300028156	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_50m	Environmental	Open in IMG/M
3300028178	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_36m	Environmental	Open in IMG/M
3300028283	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36m	Environmental	Open in IMG/M
3300028623	Metatranscriptome of saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_1_27_36m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029798	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM11	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
400m_361320	2042536000	Marine	MWAALFKAILDWLTGLAKSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGK
LWFCAnN_03627460	2088090007	Freshwater Sediment	MWAALFKAILDWLTGLVKSQTGTAGEDVTAKPGLRERLDRRLAEWKAGRGGSPR
LWFCAnN_01608750	2088090007	Freshwater Sediment	MWLALFTAILDWLTGLVQSQTRTAGEDGTAKPGLREALNKRLSTWKDRQGGV
Ga0065167_10303372	3300004693	Freshwater	MWLALFTALLDWLTGLVKSQTQAAGEDVVAKPGLKESLNKRLADWKASKGAS*
Ga0065167_10654952	3300004693	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLAEWKAKTGAP*
Ga0007794_100252983	3300004774	Freshwater	MWQALFAAILDWLTGLVKSQTRTAGEDAVAKPGLREALDKRLAEWKARRGAS*
Ga0007794_100648143	3300004774	Freshwater	MWLALFTAVLEWLTGLVKSQSRTVGEDAVAKPGLRESLNQRLAEWKDRKGAT*
Ga0007794_102371872	3300004774	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDLSPKPGLRESLNKRLADWKASKGAS*
Ga0007800_101399072	3300004776	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDVAAKPGLRESLNKRLAKWKASKGAP*
Ga0007792_100191474	3300004805	Freshwater	MWQALFAALLDWLTGLVKSQTRTAGEDAQAKPGLREALDKRLAEWKARKGAG*
Ga0007792_100420535	3300004805	Freshwater	MWLALFTALLDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKARKGAP*
Ga0007792_100491434	3300004805	Freshwater	MWQALFAAILDWLTGLVKSQTRTAGEDAVAKPGLREALDKRLAEWKARKGAP*
Ga0007792_100529504	3300004805	Freshwater	MWAALFKAILDWLTGLVRSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGGKPADNGGPQ
Ga0007792_100894053	3300004805	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWRARKGAP*
Ga0007792_101815242	3300004805	Freshwater	MWQAFFTAILAWLTGLVKSQTQTAGEDLVAKPGLKESLNKRLADWKVRKGAP*
Ga0073936_100022354	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVQSKPGLKESLDKRLAEWKAKQGVK*
Ga0073936_1000275825	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLAEWKARKGAP*
Ga0073936_1000454517	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTPTAGEDVVAKPGLKESLDKRLAEWKAKTGAP*
Ga0073936_100060235	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWKARKGAP*
Ga0073936_100061486	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKAGKKAVG*
Ga0073936_100332886	3300009175	Freshwater Lake Hypolimnion	MWFALFTAILDWLTGLVKSQTQTTGGDGVAKPGLKESLNKRLADWKARKGAP*
Ga0073936_100386698	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILAWLTGLVKSQTQTAGEDLVAKPGLRESLNKRLADWKASKGAR*
Ga0073936_101294396	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLADWKARKGAP*
Ga0073936_101797994	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKARKGAP*
Ga0073936_102127732	3300009175	Freshwater Lake Hypolimnion	MWFALFTAILDWLTGLVKSQTQTAGEDVVAKPGLREGLNKRLADWKARKGAP*
Ga0073936_102768811	3300009175	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNTRLADWKARKGAP*
Ga0073936_102983133	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTRTAGEDVVAKPGLKESLDKRLAAWKAGRGVP*
Ga0073936_103854721	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLDDWKSRTGAP*
Ga0073936_103865231	3300009175	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLAEWKASKGAP*
Ga0073936_107719073	3300009175	Freshwater Lake Hypolimnion	ALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLAAWKAGRGVP*
Ga0118673_11837901	3300009362	Anaerobic Wastewater Sludge	VWAALFAAVLEWLTGLARSRTGTAGADAAAKPGLRERLDRRLAEWRSRQ*
Ga0114951_100431524	3300009502	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDIVAKPGLRDSLNKRLDDWKARKGAP*
Ga0114951_100862853	3300009502	Freshwater	MWQALFAAILDWLTGLVKSQTQTAGEDVVGKPGLRESLDKRLADWKASKGAP*
Ga0114951_102843482	3300009502	Freshwater	MWQALFTAILDWLTGLVQSQTRTAGEDVSPKPGLRESLNKRLSDWKASKGAP*
Ga0114951_103837052	3300009502	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLDDWKSRSGAP*
Ga0114951_104042741	3300009502	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDLVAKPGLRESLNKRLADWKAS
Ga0114951_104927482	3300009502	Freshwater	MWLALFTAFLDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKASKGAP*
Ga0114951_105413833	3300009502	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLADWKVSKGAP*
Ga0123327_12670202	3300009607	Anaerobic Biogas Reactor	MWAALLAAVLEWLTALARSRTGTAGADVAAKPGLRERLDRRLAEWRSDQ*
Ga0123329_11770001	3300009656	Anaerobic Biogas Reactor	MWAALFAAVLEWLTALARSRTGTAGADALPKPGLRERLDRRLAEWKAGRAKGEVIGDQ*
Ga0123328_11757551	3300009659	Anaerobic Biogas Reactor	MWQGLFAAVLEWLTALARSRTGTAGADAAAKPGLRERLDRRLAEWKAGRGTGEVNSGQ*
Ga0116160_11256842	3300009715	Anaerobic Digestor Sludge	MWQGLFAALLEWLTALARSRSGTAGTDAAAKPGLRERLDRRLAEWRSDQ*
Ga0123332_10571614	3300009770	Anaerobic Biogas Reactor	MWQGLFAALLEWLTALARSRTGTAGADAAAKPGLRERLDRRLAEWKAGRGTGEVNSGQ*
Ga0116204_10614235	3300010293	Anoxic Lake Water	MWAALITAVLDWLTGLVKSQIRPVGTDAQAQPGLRERLDRRLAEWKAHR*
Ga0136653_103883342	3300010319	Anoxic Lake Water	MWAALITAVLDWLTGLVKSQLRPVGTDAQAQPGLRERLDRRLAEWKAHR*
Ga0163202_10695881	3300013086	Freshwater	MWAALFKAILDWLTGLVKSRTGTAGEDVSAKPGLRERLNRRLAEWKAG
Ga0163200_12216681	3300013088	Freshwater	MWAALFKAILDWLTGLVKSQTGTAGEDVTAKPGLRERLDKRLAEWKAGRGGKPADNGGPQ
(restricted) Ga0172375_100198197	3300013137	Freshwater	MWAALITAVLDWLTGLVKSQLRPVGTDAQAQPGLRERLDRRLAEWKAGREKGK*
(restricted) Ga0172375_100558512	3300013137	Freshwater	MWTALFTAVLEWLTGLARSRTGTAGADAAAKPGLRERLDRRLAAWKAGRGQGK*
Ga0182019_112209193	3300014498	Fen	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLADWKASKGAL*
Ga0182019_114781522	3300014498	Fen	MWLALFTAILDWLTGLVKSQTQTAGEDVQAKPGLRESLNKRLADWKASKGAP*
Ga0182021_113489133	3300014502	Fen	MWQALFTAILDWLTGLVMSQSRTAGEDVKPKPGLKESLDKRLAEWKARRGVP*
Ga0182021_119358013	3300014502	Fen	MWLALFTAVLDWLTGLVKSQTLTAGEDVSAKPGLRESLNKRLAAWKAAKGAG*
Ga0182021_130274573	3300014502	Fen	MWAALFTAILDWLTGLVKNQTRTVGEDAQAKPGLRESLDKRLAEWKVK
Ga0182027_113045422	3300014839	Fen	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLREGLNKRLADWKARKVAP*
Ga0194113_100021952	3300020074	Freshwater Lake	MWAALFKAILDWLTGLAKSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGGTPADNGGPQ
Ga0194111_104411543	3300020083	Freshwater Lake	MWAALFKAILDWLTGLVKCQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGK
Ga0194111_104554914	3300020083	Freshwater Lake	MWAALITAVLDWLTGLVKSQLRPVGTDAQAQPGLRERLDRRLAEWKAG
Ga0214228_10256072	3300020708	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWKARKGVP
Ga0194056_102236613	3300021070	Anoxic Zone Freshwater	MWLALFTAVLEWLTGLVKSQSRTAGEDAVAKPGLRDGLNKRLAEWKARKGAK
Ga0224533_10679562	3300022526	Soil	MWLALFTAILDWLTGLVKSQTQTAGEDGVAKPGLKESLNRRLADWKARKGAP
Ga0224533_10690892	3300022526	Soil	MWLALFTALLDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKARKGAP
Ga0224533_10804281	3300022526	Soil	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKARKGAP
Ga0212124_101153082	3300022553	Freshwater	MWAALFKAILDWLTGLVKSRTGTAGEDVSAKPGLRERLDKRLAEWKAGRGGKPADNGGPQ
Ga0212088_100107152	3300022555	Freshwater Lake Hypolimnion	MWFALFTAILDWLTGLVKSQTQTAGEDVVAKPGLREGLNKRLADWKARKGAP
Ga0212088_1001161612	3300022555	Freshwater Lake Hypolimnion	MWLALFTALLDWLTGLVKSQTQTAGGDVVAKPGVRESLNKRLADWKARKGAP
Ga0212088_100139319	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKAGKKAVG
Ga0212088_1001794810	3300022555	Freshwater Lake Hypolimnion	MWLALFTALLDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKARKGAP
Ga0212088_100247014	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNTRLADWKARKGAP
Ga0212088_100272243	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILAWLTGLVKSQTQTAGEDLVAKPGLRESLNKRLADWKASKGAR
Ga0212088_100364204	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWKARKGAP
Ga0212088_100636736	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTPTAGEDVVAKPGLKESLDKRLAEWKAKTGAP
Ga0212088_100656335	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLAEWKAKTGAP
Ga0212088_101315341	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLADWKARKGAP
Ga0212088_101316864	3300022555	Freshwater Lake Hypolimnion	MWFALFTAILDWLTGLVKSQTQTTGGDGVAKPGLKESLNKRLADWKARKGAP
Ga0212088_102521792	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLADWKAKKGVP
Ga0212088_103216144	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLAEWKAKTGAP
Ga0212088_103245773	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLAEWKARKGAP
Ga0212088_104104232	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTRTAGEDVVAKPGLKESLDKRLAAWKAGRGVP
Ga0212088_104611401	3300022555	Freshwater Lake Hypolimnion	AMWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLAEWKARKGVS
Ga0212088_105039983	3300022555	Freshwater Lake Hypolimnion	AMWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLDDWKSRSGAP
Ga0212088_105200422	3300022555	Freshwater Lake Hypolimnion	MWLALFTAILDWLTGLVKSQTQTAGEDIVAKPGLRDSLNKRLDDWKARKGAP
Ga0212088_106709172	3300022555	Freshwater Lake Hypolimnion	MWQALFTAILDWLTGLVKSQTQTAGEDVQSKPGLKESLDKRLAEWKAKQGVK
Ga0212088_107170651	3300022555	Freshwater Lake Hypolimnion	MWLALFTALLDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWKASKGAP
Ga0212121_107745742	3300022556	Anoxic Lake Water	MWAALITAVLDWLTGLVKSQLRPVGTDAQAQPGLRERLDRRLAEWKAGREKGK
(restricted) Ga0233425_1000300729	3300024054	Freshwater	VWLALFTAILDWLTGLVKSQTRTAGEDVSGKPGLKACLDKRVAEWKARRGVR
(restricted) Ga0233420_103377483	3300024300	Freshwater	VWLALFTAILDWLTGLVKSQTRTAGEDVSGKPGLKACLDKRVA
(restricted) Ga0233422_101671403	3300024333	Freshwater	VWLALFTAILDWLTGLVKSQTRTAGEDVSGKPGLKACLDKRVAEW
Ga0209835_11526072	3300025115	Anoxic Lake Water	MWAALITAVLDWLTGLVKSQIRPVGTDAQAQPGLRERLDRRLAEWKAHR
Ga0209083_10536374	3300025162	Freshwater	MWQALFAAILDWLTGLVKSQTQTAGEDVVGKPGLRESLDKRLADWKASKGAP
Ga0209697_100249161	3300025316	Freshwater Lake Hypolimnion	FTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKARKGAP
Ga0208495_10708262	3300025476	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDIVAKPGLRNSLNKRLAAWKASKGAS
Ga0208248_10408222	3300025595	Freshwater	MWQALFAAILDWLTGLVKSQTRTAGEDAVAKPGLREALDKRLAEWKARKGAP
Ga0208248_10573003	3300025595	Freshwater	FTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLAEWKAKTGAP
Ga0208613_10216843	3300025616	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGEDVVAKPGLRDSLNKRLADWRARKGAP
Ga0208613_10320741	3300025616	Freshwater	MWAALFKAILDWLTGLAKSQTGTAGEDVTAKPGLRERLDRRL
Ga0208613_10768442	3300025616	Freshwater	MWLALFTAVLEWLTGLVKSQSRTVGEDAVAKPGLRESLNQRLAEWKDRKGAT
Ga0268281_10041857	3300028156	Saline Water	MWAALFKAILDWLTGLVKSQTGTAGEDVAAKPGLRERLDRRLAEWKAGRGGKPADNGRPHGMPADNGGPQ
Ga0268281_10061915	3300028156	Saline Water	MWAALFKAILDWLTGLVKSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGKEK
Ga0265593_11427361	3300028178	Saline Water	MWLALFTAILDWLTGLVKSQTRTAGEDVLAKPGLRESLDKRLAEWKV
Ga0265593_11810972	3300028178	Saline Water	MWLALFTAVLEWLTGLVKSQSRTAGEDAVAKPGLRESLNKRLEAWKGKAGAP
Ga0268283_11778532	3300028283	Saline Water	MWLALFTAILDWLTGLVKSQTRTAGEDVVAKSGLRESLDKRLAEWKVRKGAP
Ga0268283_11814691	3300028283	Saline Water	MWLALFTAVLEWLTGLVKSQSRTAGEDAVAKPGLRDGLNKRLAEW
Ga0268283_12187502	3300028283	Saline Water	RVDAMWLALFTAVLEWLTGLVKSQSRTAGEDAVAKPGLRDGLNKRLAEWKARKGAT
Ga0257141_10363962	3300028623	Marine	MWQALFKAILDWLTGLVKSQSRTAGEDLSAKPGLKESLDKRLAEWKKKEGAP
Ga0239581_10613084	3300029798	Freshwater Lake	VMWLALFTALLDWLTGLVKSQTQTAGGDVVAKPGLKESLNRRLADWKARKGAG
Ga0239581_10627981	3300029798	Freshwater Lake	AAMWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKESLDKRLADWKAKKGVP
Ga0311343_114020642	3300029953	Bog	MWLALFTAFLDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKASKGAS
Ga0265332_102808151	3300031238	Rhizosphere	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLAEWK
Ga0265342_103184963	3300031712	Rhizosphere	MWQALFTAILDWLTGLVKSQTQTAGEDVQAKPGLKDGLNKRLDDWKSRSGAP
Ga0315268_123528893	3300032173	Sediment	MWQALFTAILDWLTGLVKSQTRTAGEDVVAKPGLREGLNKRLAAWKASKGAP
Ga0316222_11783493	3300032561	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKARKGAS
Ga0316226_100114922	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVQAKPGLRESLNRRLADWKASKGAP
Ga0316226_100576816	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLDKRLAAWKASKGAP
Ga0316226_10079159	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLDDWKARKGVP
Ga0316226_10084366	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTQTVGEDVVAKPGLKESLDKRLSEWKARKGVT
Ga0316226_10209205	3300032562	Freshwater	MWQALFKAILDWLTGLAKSQTQTAGEDFVAKPGLRESLDKRLADWKASKGAP
Ga0316226_10216876	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVAGKSGLKESLDKRLAEWKARRGVP
Ga0316226_10296654	3300032562	Freshwater	MWQALFTAILDWLTGLVMSQSRTAGEDVKPKPELKESLDKRLAEWKARRGVP
Ga0316226_10499404	3300032562	Freshwater	MWQALFTAIVTGLLDWLSGLVKSQTRTAGEDVVAKSGLKESLDKRLAAWKAGRGVP
Ga0316226_10741742	3300032562	Freshwater	MWQTLFTAILDWLTGLVKSQTQTAGEDVVAKSGLKESLNKRLAEWKARRGVP
Ga0316226_10769221	3300032562	Freshwater	MWQALFTAILAWLTGLVKSQTQTAGEDLVAKPGLRGSLNKRLADWKASKGAS
Ga0316226_10830052	3300032562	Freshwater	MWLALFTALLDWLTGLVKSQTQTAGEDVVAKPGLRESLNKRLADWKVRKGAP
Ga0316226_10890233	3300032562	Freshwater	MWQALFTAILAWLTGLVKSQTQAAGEDLVAKPGLRESLNKRLADWKASKGAS
Ga0316226_11434043	3300032562	Freshwater	MWLALFTAVLDWLTGLVKSQTQTAGEDVQAKPGLKERLNKRLAEWKASKGAP
Ga0316226_11484693	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVVAKPGLKESLDKRLAAWKAGRGAL
Ga0316226_11497353	3300032562	Freshwater	MWQALFTAIVTGLLDWLSGLVKSQTQTAGEDVVAKPGLKESLDKRLAEWKAGRGVP
Ga0316226_11598502	3300032562	Freshwater	MWQALFTAILDWLTGLVQSQTRTAGEDVQAKPGLRESLNKRLADWKASKGAP
Ga0316226_12060922	3300032562	Freshwater	MWQALFTAIVTGLLDWLSGLVKSQTRTAGEDVVAKPGLKESLNKRLAEWKAGRGVL
Ga0316226_12346751	3300032562	Freshwater	LFTALLDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLADWKANKGAP
Ga0316226_12395522	3300032562	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVAGKPGLKESLDRRLAAWKTRRRVP
Ga0316226_12402433	3300032562	Freshwater	MWLALFTAILDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKARKGAP
Ga0316226_12700331	3300032562	Freshwater	LFTAILDWLTGLVKSQTQTAGEDIVAKPGLRESLNKRLADWKASKGAR
Ga0316232_11497644	3300032605	Freshwater	FTAILDWLTGLVKSQTQTAGEDVVAKPGLKESLNKRLDDWKARKGVP
Ga0316232_12157042	3300032605	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVVAKPGLKESLDKRLAAWKASKGAP
Ga0316230_12843451	3300032668	Freshwater	LALFTAILDWLTGLVKSQTQTAGGDVVAKPGLRESLNKRLADWKARKGAP
Ga0316229_10249796	3300032676	Freshwater	QALFTAILDWLTGLVKSQTRTAGEDVAGKSGLKESLDKRLAEWKARRGVP
Ga0316229_10871744	3300032676	Freshwater	MWQALITAILDWLTGLVKSQTRTAGEDVVAKPGLKESLDKRLAEWKAGRGVP
Ga0316229_11943762	3300032676	Freshwater	MWQALFTAILDWLTGLVKSQTRTAGEDVSGKPGLKACLDKRVAEWKARRGVP
Ga0316229_12072071	3300032676	Freshwater	GLVMSQSRTAGEDVKPKPELKESLDKRLAEWKARRGVP
Ga0316229_12224061	3300032676	Freshwater	MWQALFTAILDWLTGLVQSQTRTAGEDVQAKPGLRESLNKRLSDWKASKGAP
Ga0334978_0473858_29_193	3300033979	Freshwater	MWAALFKAILDWLTGLVKSRTGTAGEDVTAKPGLRDRLDRRLAEWKAGRVKGEK
Ga0334981_0003738_257_469	3300033980	Freshwater	MWAALFKAILDWLTGLVKSQTGTAGEDVTAKPGLRGRLDRRLAEWKAGRGGKPADNGGPHGKPTDNGGPQ
Ga0334995_0020240_4119_4289	3300034062	Freshwater	MWAALFKAILDWLTGLVKSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGERGNEQ
Ga0334995_0027639_652_834	3300034062	Freshwater	MWAALFKAILDWLTGLVKSQTGTAGEDVSAKPGLRERLDRRLAEWKAGRGGKPADNGGPQ
Ga0334995_0034795_1684_1839	3300034062	Freshwater	MWAALFKAILDWLTGLAKSQTGTAGEDVSAKPGLRGRLDRRLAEWKAGRGK
Ga0335027_0043754_1295_1477	3300034101	Freshwater	MWAALFKAILDWLTGLAKSQTGTAGEDVSAKPGLRERLDKRLAEWKTGRDGKPADNGGPQ
Ga0335027_0169005_1292_1474	3300034101	Freshwater	MWAALFKAILDWLTGLVKSQTGTAGEDVTAKPGLRERLDRRLAEWKTGRGGKPADNGGPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters