Metagenome / Metatranscriptome Family F048185

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048185
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	55 residues
Representative Sequence	MESRAPESMSSAVSPSTSAKSHTHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Number of Associated Samples	97
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.67 %
% of genes near scaffold ends (potentially truncated)	22.30 %
% of genes from short scaffolds (< 2000 bps)	66.22 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.243 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (14.189 % of family members)
Environment Ontology (ENVO)	Unclassified (41.892 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.757 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.29% β-sheet: 0.00% Coil/Unstructured: 60.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF02769	AIRS_C	20.95
PF00586	AIRS	9.46
PF13607	Succ_CoA_lig	8.78
PF13380	CoA_binding_2	8.11
PF00551	Formyl_trans_N	2.70
PF14520	HHH_5	0.68
PF00106	adh_short	0.68
PF08546	ApbA_C	0.68
PF00155	Aminotran_1_2	0.68
PF03626	COX4_pro	0.68
PF13545	HTH_Crp_2	0.68
PF00115	COX1	0.68
PF02630	SCO1-SenC	0.68
PF08031	BBE	0.68
PF14522	Cytochrome_C7	0.68
PF03916	NrfD	0.68
PF12826	HHH_2	0.68
PF01479	S4	0.68
PF08501	Shikimate_dh_N	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.68
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.68
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.68
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.24 %
Unclassified	root	N/A	31.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.24 %
Unclassified	root	N/A	31.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.24 %
Unclassified	root	N/A	31.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.68 %
Unclassified	root	N/A	31.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.19 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.19 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.41 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10.14 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.41 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8.11 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02TU1HX	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
2189573001\|GZR05M101B432V	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
2228664022\|INPgaii200_c0453737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100534618	Not Available	1894	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101753820	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101754006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101754023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1602	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1023793	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	896	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1006473	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300001867\|JGI12627J18819_10005244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4924	Open in IMG/M
3300001867\|JGI12627J18819_10014319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3171	Open in IMG/M
3300003505\|JGIcombinedJ51221_10014652	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300003505\|JGIcombinedJ51221_10118057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300005167\|Ga0066672_10107539	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300005332\|Ga0066388_100437812	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300005332\|Ga0066388_100456512	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300005332\|Ga0066388_100497502	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300005332\|Ga0066388_100562745	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005332\|Ga0066388_100727746	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300005434\|Ga0070709_10017575	All Organisms → cellular organisms → Bacteria	4104	Open in IMG/M
3300005434\|Ga0070709_10030010	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300005434\|Ga0070709_10176881	Not Available	1496	Open in IMG/M
3300005434\|Ga0070709_10941367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005436\|Ga0070713_100123970	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300005439\|Ga0070711_100121671	Not Available	1931	Open in IMG/M
3300005529\|Ga0070741_10006443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	25194	Open in IMG/M
3300005538\|Ga0070731_10009191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7468	Open in IMG/M
3300005538\|Ga0070731_10318795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300005542\|Ga0070732_10014456	All Organisms → cellular organisms → Bacteria	4383	Open in IMG/M
3300005542\|Ga0070732_10406070	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005542\|Ga0070732_10839818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005542\|Ga0070732_10848469	Not Available	557	Open in IMG/M
3300005764\|Ga0066903_100203202	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300005921\|Ga0070766_10019183	All Organisms → cellular organisms → Bacteria	3621	Open in IMG/M
3300006041\|Ga0075023_100062014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300006041\|Ga0075023_100531936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006052\|Ga0075029_100095725	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300006059\|Ga0075017_100848010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300006086\|Ga0075019_10499139	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300006797\|Ga0066659_10241621	Not Available	1347	Open in IMG/M
3300009090\|Ga0099827_11755821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009792\|Ga0126374_10012544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3410	Open in IMG/M
3300009792\|Ga0126374_10917832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300009792\|Ga0126374_11631088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010043\|Ga0126380_10003528	All Organisms → cellular organisms → Bacteria	6371	Open in IMG/M
3300010043\|Ga0126380_10823205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300010048\|Ga0126373_10049215	Not Available	3740	Open in IMG/M
3300010048\|Ga0126373_11055314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300010048\|Ga0126373_12202484	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300010358\|Ga0126370_10740256	Not Available	869	Open in IMG/M
3300010360\|Ga0126372_10567602	Not Available	1081	Open in IMG/M
3300010360\|Ga0126372_10660526	Not Available	1014	Open in IMG/M
3300010361\|Ga0126378_12812362	Not Available	556	Open in IMG/M
3300010361\|Ga0126378_13066664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300010398\|Ga0126383_12416226	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300012202\|Ga0137363_10000206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31859	Open in IMG/M
3300012202\|Ga0137363_10339941	Not Available	1240	Open in IMG/M
3300012203\|Ga0137399_10296811	Not Available	1334	Open in IMG/M
3300012208\|Ga0137376_10072017	All Organisms → cellular organisms → Bacteria	2879	Open in IMG/M
3300012361\|Ga0137360_11102742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300012361\|Ga0137360_11104312	Not Available	685	Open in IMG/M
3300012685\|Ga0137397_10220237	Not Available	1412	Open in IMG/M
3300012925\|Ga0137419_10002038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9083	Open in IMG/M
3300012944\|Ga0137410_11097625	Not Available	681	Open in IMG/M
3300012971\|Ga0126369_11158117	Not Available	863	Open in IMG/M
3300012971\|Ga0126369_13544423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300015371\|Ga0132258_10010004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19604	Open in IMG/M
3300016357\|Ga0182032_10730929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300016404\|Ga0182037_10000139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31575	Open in IMG/M
3300016404\|Ga0182037_11830430	Not Available	543	Open in IMG/M
3300016422\|Ga0182039_12057982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300017927\|Ga0187824_10005578	All Organisms → cellular organisms → Bacteria	3518	Open in IMG/M
3300017927\|Ga0187824_10148087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300017930\|Ga0187825_10151836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300017930\|Ga0187825_10301336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300017932\|Ga0187814_10238498	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300017936\|Ga0187821_10007164	Not Available	3776	Open in IMG/M
3300017936\|Ga0187821_10121426	Not Available	973	Open in IMG/M
3300017939\|Ga0187775_10012409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2195	Open in IMG/M
3300017943\|Ga0187819_10004669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7466	Open in IMG/M
3300017959\|Ga0187779_10000033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	99266	Open in IMG/M
3300017994\|Ga0187822_10036282	Not Available	1336	Open in IMG/M
3300018468\|Ga0066662_10035716	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300019879\|Ga0193723_1001110	All Organisms → cellular organisms → Bacteria	10418	Open in IMG/M
3300020170\|Ga0179594_10347656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300020579\|Ga0210407_10143670	Not Available	1836	Open in IMG/M
3300020580\|Ga0210403_10104459	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300020580\|Ga0210403_11501525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300020581\|Ga0210399_10165399	Not Available	1833	Open in IMG/M
3300020581\|Ga0210399_10580747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300020583\|Ga0210401_10000159	All Organisms → cellular organisms → Bacteria → Acidobacteria	80329	Open in IMG/M
3300020583\|Ga0210401_10060598	Not Available	3565	Open in IMG/M
3300021088\|Ga0210404_10050570	Not Available	1953	Open in IMG/M
3300021088\|Ga0210404_10220011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300021168\|Ga0210406_10012856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8082	Open in IMG/M
3300021402\|Ga0210385_10520394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300021404\|Ga0210389_10520173	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300021406\|Ga0210386_11440683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300021439\|Ga0213879_10027674	Not Available	1405	Open in IMG/M
3300021441\|Ga0213871_10125658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300021560\|Ga0126371_10000786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	26567	Open in IMG/M
3300021560\|Ga0126371_10001347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	20700	Open in IMG/M
3300021560\|Ga0126371_10164098	Not Available	2293	Open in IMG/M
3300021560\|Ga0126371_10975882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300024330\|Ga0137417_1416642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2387	Open in IMG/M
3300025906\|Ga0207699_10897111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300026322\|Ga0209687_1261271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026482\|Ga0257172_1111626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300027034\|Ga0209730_1025377	Not Available	652	Open in IMG/M
3300027050\|Ga0209325_1014496	Not Available	901	Open in IMG/M
3300027071\|Ga0209214_1004593	Not Available	1496	Open in IMG/M
3300027161\|Ga0208368_104787	Not Available	702	Open in IMG/M
3300027562\|Ga0209735_1010600	Not Available	1780	Open in IMG/M
3300027706\|Ga0209581_1000041	All Organisms → cellular organisms → Bacteria → Acidobacteria	504766	Open in IMG/M
3300027842\|Ga0209580_10038440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2199	Open in IMG/M
3300027842\|Ga0209580_10048722	Not Available	1970	Open in IMG/M
3300027898\|Ga0209067_10419097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300027910\|Ga0209583_10030266	Not Available	1792	Open in IMG/M
3300028536\|Ga0137415_10000025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	130282	Open in IMG/M
3300028792\|Ga0307504_10002484	Not Available	3620	Open in IMG/M
3300030730\|Ga0307482_1315803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031231\|Ga0170824_102753833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300031546\|Ga0318538_10117351	Not Available	1387	Open in IMG/M
3300031715\|Ga0307476_10100009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2046	Open in IMG/M
3300031718\|Ga0307474_10194602	Not Available	1542	Open in IMG/M
3300031720\|Ga0307469_10000132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	29111	Open in IMG/M
3300031720\|Ga0307469_10609193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300031720\|Ga0307469_12300628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031740\|Ga0307468_100013658	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300031754\|Ga0307475_10058753	Not Available	2911	Open in IMG/M
3300031754\|Ga0307475_10317720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300031754\|Ga0307475_10330450	Not Available	1224	Open in IMG/M
3300031820\|Ga0307473_10086233	Not Available	1626	Open in IMG/M
3300031820\|Ga0307473_10639684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031820\|Ga0307473_10671831	Not Available	724	Open in IMG/M
3300031820\|Ga0307473_10704366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300031823\|Ga0307478_10000427	All Organisms → cellular organisms → Bacteria → Acidobacteria	44169	Open in IMG/M
3300031962\|Ga0307479_10003415	All Organisms → cellular organisms → Bacteria	14451	Open in IMG/M
3300032076\|Ga0306924_11290889	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300032174\|Ga0307470_10115065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1575	Open in IMG/M
3300032180\|Ga0307471_100018638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5001	Open in IMG/M
3300032180\|Ga0307471_100040542	Not Available	3724	Open in IMG/M
3300032180\|Ga0307471_100071224	Not Available	3000	Open in IMG/M
3300032180\|Ga0307471_100163717	Not Available	2164	Open in IMG/M
3300032261\|Ga0306920_100301363	Not Available	2387	Open in IMG/M
3300032261\|Ga0306920_102251559	Not Available	756	Open in IMG/M
3300033158\|Ga0335077_11262087	Not Available	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.65%
Host-Associated	Host-Associated	1.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.84%
Aquatic	Environmental → Aquatic	10.81%
Plants	Host-Associated → Plants	1.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.84%
Freshwater	Environmental → Aquatic → Freshwater	6.08%
Sediment	Environmental → Aquatic → Sediment	4.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.27%
Loam	Environmental → Terrestrial → Soil → Loam	15.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.03%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	14.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.35%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_04343140	2070309004	Green-Waste Compost	MESGAPENMSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
FD2_06232420	2189573001	Grass Soil	MSSAVSSSTNAKSCAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
INPgaii200_04537371	2228664022	Soil	MESRAPESMSSAVSPSTIAKAHTCEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
INPhiseqgaiiFebDRAFT_1005346183	3300000364	Soil	MEPRAPEGTFVSPSNAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
INPhiseqgaiiFebDRAFT_1017538202	3300000364	Soil	MESRAPESMSSAVSPSTIAKAHTCEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
INPhiseqgaiiFebDRAFT_1017540062	3300000364	Soil	ESVSAVSESSAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
INPhiseqgaiiFebDRAFT_1017540233	3300000364	Soil	MESRAPESTSSAVSPSTTAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
AP72_2010_repI_A01DRAFT_10237933	3300000579	Forest Soil	GCMESRAPENMSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
AP72_2010_repI_A10DRAFT_10064734	3300000651	Forest Soil	MESRAPENMSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
JGI12627J18819_100052445	3300001867	Forest Soil	MDSRAPESMSAAVSQSTGTKAHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
JGI12627J18819_100143194	3300001867	Forest Soil	MDSRAPEGISPAVSNTNSAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFIAH*
JGIcombinedJ51221_100146524	3300003505	Forest Soil	MDSRAPEGISPAVSTTTSAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
JGIcombinedJ51221_101180572	3300003505	Forest Soil	MDSRAPESMSSAVSQSTGTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0066672_101075392	3300005167	Soil	MDSRAPESMSSAVSQATGTKCHPHEGRNFWVLTAYGVSGLALFGILAYYFSDFVSH*
Ga0066388_1004378121	3300005332	Tropical Forest Soil	MQSRAPESTSSAVTNTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0066388_1004565122	3300005332	Tropical Forest Soil	MDSRAPESMSPTASSASNAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0066388_1004975022	3300005332	Tropical Forest Soil	MEPRAPESVSVSPSNAAKSHPCEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0066388_1005627454	3300005332	Tropical Forest Soil	MESRAPENMSSTVSPSTGAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0066388_1007277463	3300005332	Tropical Forest Soil	MESRAPENTSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0070709_100175755	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MESRAPESMSSAVSSSTSTKSCALEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0070709_100300103	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MESRAPEVMSSTVSSAKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0070709_101768812	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDSRAPESMSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0070709_109413671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MESRAPEAMSSTVSSAKSHPHEGRNFWVLTAYGVSGLALFGILAYYFSDFVSH*
Ga0070713_1001239703	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MESRAPESMSSAVSSSASTKSCALEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0070711_1001216712	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MESRVPESMSSAVSSSTNAKSCSHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0070741_100064434	3300005529	Surface Soil	MRSGAPEPKSSVVSPSTAKSRPLHESRTFWVLTAYGISGLALFGVIAYYFSDFISH*
Ga0070741_101504463	3300005529	Surface Soil	MEDRAPANSVSASSQSSGIRHEGRNVWVLTAYGISGLALFGILAYYFSDFVAH*
Ga0070731_100091914	3300005538	Surface Soil	MDSRAPEGISPAVSTTTSAKAHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
Ga0070731_103187952	3300005538	Surface Soil	MDSRAPESSPAVSTASSAKIHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH*
Ga0070732_100144563	3300005542	Surface Soil	MDSRAPESMSTTVSSSSTTKIHPCEGRNFWVLTAYGISGLALFGILAYYFSDFVAH*
Ga0070732_104060702	3300005542	Surface Soil	MESRAPEVMSSTVSNAKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0070732_108398181	3300005542	Surface Soil	MDSRAPESMSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGI
Ga0070732_108484692	3300005542	Surface Soil	MDSRAPESMSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGIL
Ga0066903_1002032022	3300005764	Tropical Forest Soil	MESGAPENTSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0070766_100191832	3300005921	Soil	MDSRAPESMSSTVSSSSTTKIHPREGRNFWVLTAYGISGLALFGILAYYFSDFVAH*
Ga0075023_1000620142	3300006041	Watersheds	MESRAPESLSSAVSPSTSTKAHACEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH*
Ga0075023_1005319361	3300006041	Watersheds	MDSRAPESTSSAVLPSNGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH*
Ga0075029_1000957251	3300006052	Watersheds	MHSRAPESTSSSVSPSTGVKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH*
Ga0075017_1008480102	3300006059	Watersheds	MDSRAPEITSSAVSPSNSAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH*
Ga0075019_104991392	3300006086	Watersheds	MDSQAPDSVSSPVSPSATAKSHPREGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0066659_102416211	3300006797	Soil	MDSRAPESMSSAVSQSTGTKCHPHEGRNFWVLTAYGVSGLALFGILAYYFSDFVSH*
Ga0099827_117558212	3300009090	Vadose Zone Soil	MESQAPESMSSAISPSTSAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126374_100125443	3300009792	Tropical Forest Soil	MEPRAPESVSVSPSNAAKSHPCEGRKFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126374_109178321	3300009792	Tropical Forest Soil	MESRAPENTSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDF
Ga0126374_116310882	3300009792	Tropical Forest Soil	MESGAPENMSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSD
Ga0126380_100035284	3300010043	Tropical Forest Soil	MEPRAPESVSASSSSAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH*
Ga0126380_108232051	3300010043	Tropical Forest Soil	MSSTVSPSTGAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFV
Ga0126373_100492153	3300010048	Tropical Forest Soil	MDSRAPERISPVVSTTTSAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFIAH*
Ga0126373_110553141	3300010048	Tropical Forest Soil	ESSSPTASSASNAKVHPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126373_122024842	3300010048	Tropical Forest Soil	MEHQAPQGSSVSTTISQSSVKAHPREGRNFWVLTVYGISGLVLFGILAYYFSDFVAR*
Ga0126370_107402561	3300010358	Tropical Forest Soil	MDSRAPESSSPTASSASNAKVHPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126372_105676022	3300010360	Tropical Forest Soil	MSSAVSPSTGAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126372_106605262	3300010360	Tropical Forest Soil	MDSQAPDSMSPTASSASNAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVS
Ga0126378_128123622	3300010361	Tropical Forest Soil	APESTSSAVTNTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH*
Ga0126378_130666641	3300010361	Tropical Forest Soil	MSSTVSPSTGAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126383_124162262	3300010398	Tropical Forest Soil	MEHQAPQSSAVSTTISQSSAKVHPREGRNFWVLTAYGISGLVLFGILAYYFSDFIAK*
Ga0137363_100002066	3300012202	Vadose Zone Soil	MDSRAPGSVSSPVSSVASAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSR*
Ga0137363_103399412	3300012202	Vadose Zone Soil	MSSAISPSTSAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0137399_102968112	3300012203	Vadose Zone Soil	MESRAPETVSAVSPSARAKSHPQEGRNFWVLTAYGISGLALFGVLAYYFSEFVSH*
Ga0137376_100720173	3300012208	Vadose Zone Soil	MESRAPEGVSAVSASNAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0137360_111027422	3300012361	Vadose Zone Soil	MESQAPESMSSAISPSTSAKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDCVSH*
Ga0137360_111043121	3300012361	Vadose Zone Soil	MDSRAPEGISSPISSSTNAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0137397_102202372	3300012685	Vadose Zone Soil	MESRAQESVSAVSPSAGAKSYPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0137419_100020385	3300012925	Vadose Zone Soil	MESRAPETVSAVSPSAGAKSYPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0137410_110976251	3300012944	Vadose Zone Soil	PESMSSAVSSSTSTKSCALEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH*
Ga0126369_111581171	3300012971	Tropical Forest Soil	MSPTASSASNAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFV
Ga0126369_135444231	3300012971	Tropical Forest Soil	RRVSMDSRAPESVSPVVTTNTSANSHPHEGRNFWVLTAYGVSGLALFGVLAYYFSDFVSH
Ga0132258_100100042	3300015371	Arabidopsis Rhizosphere	MEPRAPEGTFVSPSNAAKSHPHEGRNFWVLTAYGITGLALFGVLAYYFSDFVAH*
Ga0182032_107309292	3300016357	Soil	MDSRAPESVSSTASTSATVKSHPHEGRNFWVLTAYGLSGLVLFGILAYYFSDFISH
Ga0182037_100001391	3300016404	Soil	MQSRAPESSSSAVSPSPATSHTHASRNFWVLTAYGISGLALFGILAYYFS
Ga0182037_118304302	3300016404	Soil	MDSRAPESVSSTASTSATVKSHPHEGRNFWVLTAYGISGLVLFGILA
Ga0182039_120579821	3300016422	Soil	MDSRAPESVSSTASTSATVKSHPHEGRSFWVLTAYGISGLVLFGILAYYFSDFISH
Ga0187824_100055783	3300017927	Freshwater Sediment	MESRAPETTSSAVSPSANSHSHESRNFWVLTAYGISGLALFGIIAYYFSDFVSH
Ga0187824_101480871	3300017927	Freshwater Sediment	MESRAPEVMSSTVSNAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0187825_101518362	3300017930	Freshwater Sediment	MESRAPEVMSSTVSNAKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0187825_103013362	3300017930	Freshwater Sediment	MESRAPESMSSAVSPSPATSRTHESRNFWVLTAYGISGLALFGILAYYFSDFVTH
Ga0187814_102384981	3300017932	Freshwater Sediment	HQAPESSVSTTITQSSAKAHPREGRNFWVLTAYGISGLVVFGILAYYFSEFVAK
Ga0187821_100071643	3300017936	Freshwater Sediment	MESRAPENISSAVSPSTKSHSHESRNFWVLTAYGISGLALFGIIAYYFSDFVSH
Ga0187821_101214262	3300017936	Freshwater Sediment	MSSAVSPSTSAKSHTHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0187775_100124092	3300017939	Tropical Peatland	MEHQAPEGSSVSTPLTQSTAKAHPREGRNFWVLTAYGISGLVVFGILAYYFSEFVAK
Ga0187819_100046693	3300017943	Freshwater Sediment	MEHQAPESSVSTTITQSSAKAHPREGRNFWVLTAYGISGLVVFGILAYYFSEFVAK
Ga0187779_1000003363	3300017959	Tropical Peatland	MEHQAPEGSSASTTLTQSTVKAHPREGRNFWVLTAYGISGLVVFGILAYYFSEFLAK
Ga0187822_100362821	3300017994	Freshwater Sediment	MESRAPESMSSAVSPSTSAKSHTHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0066662_100357162	3300018468	Grasslands Soil	MDSRAPESMSSAVSQATGTKCHPHEGRNFWVLTAYGVSGLALFGILAYYFSDFVSH
Ga0193723_10011106	3300019879	Soil	MESRASESTSTTISSSTAAKSLPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0179594_103476562	3300020170	Vadose Zone Soil	MESRAQESVSAVSPSAGAKSYPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0210407_101436701	3300020579	Soil	MDSRAPEITSSAVSPSKDAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVS
Ga0210403_101044591	3300020580	Soil	MDSRAPESVSPTVSTASSAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0210403_115015251	3300020580	Soil	MDSRAPEITSSAVSPSKDAKSHPLEGRNFWVLTAYGISGLALFGVLAYF
Ga0210399_101653992	3300020581	Soil	MDSRAPEITSSAVSPSKDAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH
Ga0210399_105807472	3300020581	Soil	MDSRAPESMSSAVSQSTGTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0210401_1000015963	3300020583	Soil	MDSRAPEGISPAVSTTTSAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0210401_100605982	3300020583	Soil	MDSRAPESSPAVSTASSAKIHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0210404_100505702	3300021088	Soil	MDSRAPESMSSTVSSSSTTKIHPREGRNFWVLTAYGISGLALFGILAYYFSDFVAH
Ga0210404_102200112	3300021088	Soil	MESRAPEGMSSAVSPSNGAKSHAREGRNFWVLTAYGVSGLALFGILAYYFSDFVSH
Ga0210406_100128563	3300021168	Soil	MESRAPETMSSAVSPSTSVKSRACEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0210385_105203942	3300021402	Soil	TGTKSMSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0210389_105201731	3300021404	Soil	MDSRAPESVSPTVSTASSAKVHPHEGRNFWVLTAYGISGLALFGVLAYYF
Ga0210386_114406832	3300021406	Soil	LCHGASRQEGFMDSRAPESVSPTVSTASSAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0213879_100276741	3300021439	Bulk Soil	MDSRAPEGISPAVSTTSAKSHPREGRNFWVLTAYGVSGLALFGVLAYYFSDFVAH
Ga0213871_101256581	3300021441	Rhizosphere	MDSRAPESVSPAITTNSTTKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0126371_1000078614	3300021560	Tropical Forest Soil	MDSRAPESMSPTASSASNAKVHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0126371_100013477	3300021560	Tropical Forest Soil	MDSRAPESSSPTASSASNAKVHPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0126371_101640982	3300021560	Tropical Forest Soil	MESGAPENTSSAVSPSTGVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0126371_109758822	3300021560	Tropical Forest Soil	MDSRAPEGVSPAVSTTTSAKSHRHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0137417_14166424	3300024330	Vadose Zone Soil	MESRAPETVSAVSPSAGAKSYPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0207699_108971111	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MESRAPEAMSSTVSSAKSHPHEGRNFWVLTAYGVSGLALFGILAYYFSDFVSH
Ga0209687_12612712	3300026322	Soil	MDSRAPESMSSAVSQATGTKCHPHEGRNFWVLTAYGVSGLALFGILAYYFSD
Ga0257172_11116261	3300026482	Soil	EGFMESRAPETVSAVSPSAGAKSHPQEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0209730_10253772	3300027034	Forest Soil	MDSRAPESMSAAVSQSTGTKAHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0209325_10144962	3300027050	Forest Soil	MDSRAPESMSSVVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0209214_10045932	3300027071	Forest Soil	MSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0208368_1047871	3300027161	Forest Soil	EGRMDSRAPESMSSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0209735_10106002	3300027562	Forest Soil	MESRVSESMSSAVSSSTAKSHPREGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0209581_100004186	3300027706	Surface Soil	MRSGAPEPKSSVVSPSTAKSRPLHESRTFWVLTAYGISGLALFGVIAYYFSDFISH
Ga0209580_100384402	3300027842	Surface Soil	MDSRAPEGISPAVSTTTSAKAHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0209580_100487223	3300027842	Surface Soil	MSTTVSSSSTTKIHPCEGRNFWVLTAYGISGLALFGILAYYFSDFVAH
Ga0209067_104190972	3300027898	Watersheds	MDSRAPESTSSAVSPSNGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH
Ga0209583_100302663	3300027910	Watersheds	MESRAPESLSSAVSPSTSTKAHACEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0137415_1000002520	3300028536	Vadose Zone Soil	MDSRAPGSVSSPVSSVASAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSR
Ga0307504_100024843	3300028792	Soil	MESRAPESMSSAVSPSTSAKSHACEGRNFWVLTAYGISGLALFGVLAYYFSDFVSR
Ga0307482_13158032	3300030730	Hardwood Forest Soil	WGKHCVARLSRDEFPSRRVSMDSRAPEGISPAVSTTTSAKAHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0170824_1027538332	3300031231	Forest Soil	MESRAPESMSSAVSSSTNAKSCAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0318538_101173511	3300031546	Soil	MQSRAPESSSSAVSPSPATSHTHASRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0307476_101000091	3300031715	Hardwood Forest Soil	PSRRVSMDSRAPEGISPAVSTTTSAKAHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0307474_101946022	3300031718	Hardwood Forest Soil	RLCYGDSRQEGFMDSRAPESSPAVSTASSAKIHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0307469_1000013218	3300031720	Hardwood Forest Soil	MESRAPESMSSAVSPSTSVKVHAHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0307469_106091931	3300031720	Hardwood Forest Soil	MDSRAPESSPAVSTASSAKIHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0307469_123006281	3300031720	Hardwood Forest Soil	MDSRAPESTSSVVSPSNGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVS
Ga0307468_1000136583	3300031740	Hardwood Forest Soil	MESRAPESVSAVSPSNAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0307475_100587534	3300031754	Hardwood Forest Soil	MDSRAPENMSSAVSQSTGTKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0307475_103177202	3300031754	Hardwood Forest Soil	MESRAPEGMSSAVSRASSAKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFISH
Ga0307475_103304502	3300031754	Hardwood Forest Soil	CMDSRAPESTSSAVSPSTGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVTH
Ga0307473_100862331	3300031820	Hardwood Forest Soil	MESRAPEGMSSAVSQASSAKSHPHEGRNFWVLTAYGISGLALFGILAYYFSDFISH
Ga0307473_106396843	3300031820	Hardwood Forest Soil	MEARAPESVSSPAVTSTNVKSHPREGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0307473_106718312	3300031820	Hardwood Forest Soil	MDSRAPESTSSVVSPSNGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVSH
Ga0307473_107043662	3300031820	Hardwood Forest Soil	MSSAVSSSTNAKSCSHEGRNFWVLTAYGISGLALCGVLAYYFSDFVSH
Ga0307478_1000042721	3300031823	Hardwood Forest Soil	MDSRAPESTSSTVSSSSTTKIHPREGRNFWVLTAYGISGLALFGILAYYFSDFVAH
Ga0307479_1000341516	3300031962	Hardwood Forest Soil	MDSRALESTSSAVSPSTGAKSHPLEGRNFWVLTAYGISGLALFGVLAYFVSDFVTH
Ga0306924_112908892	3300032076	Soil	MDSGAPESVSSTVSTSTTVKSHPREGRNFWVLTAYGISGLVLFGILAYYFSDFISH
Ga0307470_101150653	3300032174	Hardwood Forest Soil	MESRAPESMSSAVSPSTIAKAPTCEGRNFWVLTAYGISGLALFGVLAYYFSDFVAH
Ga0307471_1000186385	3300032180	Hardwood Forest Soil	MESRAPESVSAVSPSNAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFISH
Ga0307471_1000405424	3300032180	Hardwood Forest Soil	SSAVSQSTGTKCHPHEGRNFWVLTAYGISGLALFGILAYYFSDFVSH
Ga0307471_1000712243	3300032180	Hardwood Forest Soil	MESRGPESVSAVSESSAAKSHPHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0307471_1001637172	3300032180	Hardwood Forest Soil	MESRAPETMSSAVSPSTSVKSHAHEGRNFWVLTAYGISGLALFGVLAYYFSDFVSH
Ga0306920_1003013633	3300032261	Soil	MDSGAPESVSSTVSASTTVKSHPREGRNFWVLTAYGISGLVLFGILA
Ga0306920_1022515592	3300032261	Soil	SGAPESVSSTVSASTTVKSHPREGRNFWVLTAYGISGLVLFGILAYYFSDFISH
Ga0335077_112620872	3300033158	Soil	MEHQAPEGSSVSATVTQSTAKAHPREGRNFWVLTAYGISGLVVFGILAYYFSEFVAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048185

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences