Metagenome / Metatranscriptome Family F048288

Basic Information
Family ID	F048288
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	44 residues
Representative Sequence	VKAGGALVLTADAREAARRAVAEARASLGGLSPSLAVLFASAHFFGSA
Number of Associated Samples	122
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.45 %
% of genes near scaffold ends (potentially truncated)	97.97 %
% of genes from short scaffolds (< 2000 bps)	91.22 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (66.216 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.189 % of family members)
Environment Ontology (ENVO)	Unclassified (43.919 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.946 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.84% β-sheet: 0.00% Coil/Unstructured: 63.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00892	EamA	10.81
PF01243	Putative_PNPOx	10.14
PF03706	LPG_synthase_TM	9.46
PF03795	YCII	8.78
PF00355	Rieske	2.03
PF04185	Phosphoesterase	2.03
PF09587	PGA_cap	2.03
PF13561	adh_short_C2	1.35
PF13600	DUF4140	1.35
PF01402	RHH_1	1.35
PF13649	Methyltransf_25	1.35
PF08240	ADH_N	1.35
PF07690	MFS_1	1.35
PF01266	DAO	1.35
PF00989	PAS	0.68
PF00106	adh_short	0.68
PF00196	GerE	0.68
PF02909	TetR_C_1	0.68
PF13376	OmdA	0.68
PF04075	F420H2_quin_red	0.68
PF03459	TOBE	0.68
PF00676	E1_dh	0.68
PF13360	PQQ_2	0.68
PF04978	DUF664	0.68
PF00005	ABC_tran	0.68
PF03446	NAD_binding_2	0.68
PF12535	Nudix_N	0.68
PF03631	Virul_fac_BrkB	0.68
PF01066	CDP-OH_P_transf	0.68
PF09604	Potass_KdpF	0.68
PF03880	DbpA	0.68
PF07282	OrfB_Zn_ribbon	0.68
PF13601	HTH_34	0.68
PF12006	DUF3500	0.68
PF01391	Collagen	0.68
PF13411	MerR_1	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	9.46
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	8.78
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.03
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.03
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.68
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.68
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.68
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.68
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.68
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.68
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.22 %
Unclassified	root	N/A	33.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.22 %
Unclassified	root	N/A	33.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.22 %
Unclassified	root	N/A	33.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.81 %
Unclassified	root	N/A	33.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.35 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.30 %
Unclassified	root	N/A	33.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.35 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.35 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.68 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.05 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.05 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	2.03 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.05 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	2.03 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.68 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.68 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.68 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.05 %
Phytoactinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	2.03 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.68 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.68 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.05 %
Phytoactinopolyspora endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora endophytica	2.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.68 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.68 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.68 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.05 %
Phytoactinopolyspora endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora endophytica	2.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.35 %
Nocardioides sp. SYSU D00514	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. SYSU D00514	0.68 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.68 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.68 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100540726	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300003505\|JGIcombinedJ51221_10057078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1496	Open in IMG/M
3300004267\|Ga0066396_10072847	Not Available	593	Open in IMG/M
3300005172\|Ga0066683_10328051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300005436\|Ga0070713_101590184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300005538\|Ga0070731_10839017	Not Available	609	Open in IMG/M
3300005602\|Ga0070762_10246314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1110	Open in IMG/M
3300005713\|Ga0066905_100938041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M
3300006578\|Ga0074059_11982114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300006804\|Ga0079221_11059177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300006893\|Ga0073928_10563860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300006953\|Ga0074063_13491390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300006954\|Ga0079219_11279156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300009088\|Ga0099830_10572551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300009545\|Ga0105237_11120253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	794	Open in IMG/M
3300009683\|Ga0116224_10590290	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300010043\|Ga0126380_10268286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1193	Open in IMG/M
3300010047\|Ga0126382_12234246	Not Available	527	Open in IMG/M
3300010358\|Ga0126370_10156041	Not Available	1670	Open in IMG/M
3300010358\|Ga0126370_11396030	All Organisms → cellular organisms → Bacteria → Terrabacteria group	661	Open in IMG/M
3300010359\|Ga0126376_12536910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010362\|Ga0126377_11821149	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300010366\|Ga0126379_10592237	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300010398\|Ga0126383_11532272	All Organisms → cellular organisms → Bacteria → Terrabacteria group	756	Open in IMG/M
3300010868\|Ga0124844_1232556	Not Available	658	Open in IMG/M
3300011106\|Ga0151489_1179849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300012189\|Ga0137388_10256762	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1592	Open in IMG/M
3300012201\|Ga0137365_10821974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300012209\|Ga0137379_11219135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. SYSU D00514	659	Open in IMG/M
3300012210\|Ga0137378_10576544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034	Open in IMG/M
3300012211\|Ga0137377_11707075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300012350\|Ga0137372_10249056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1398	Open in IMG/M
3300012960\|Ga0164301_10287244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1100	Open in IMG/M
3300012971\|Ga0126369_10635762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1140	Open in IMG/M
3300012971\|Ga0126369_11000372	Not Available	924	Open in IMG/M
3300012971\|Ga0126369_13656240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300016294\|Ga0182041_11311417	All Organisms → cellular organisms → Bacteria → Terrabacteria group	663	Open in IMG/M
3300016319\|Ga0182033_11135298	Not Available	699	Open in IMG/M
3300016341\|Ga0182035_10351765	Not Available	1225	Open in IMG/M
3300016371\|Ga0182034_10995605	Not Available	724	Open in IMG/M
3300016387\|Ga0182040_10765990	Not Available	793	Open in IMG/M
3300016404\|Ga0182037_11605510	Not Available	578	Open in IMG/M
3300016422\|Ga0182039_12044369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300017822\|Ga0187802_10369701	All Organisms → cellular organisms → Bacteria → Terrabacteria group	565	Open in IMG/M
3300017943\|Ga0187819_10743049	All Organisms → cellular organisms → Bacteria → Terrabacteria group	552	Open in IMG/M
3300017948\|Ga0187847_10591844	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300017959\|Ga0187779_11070652	Not Available	562	Open in IMG/M
3300017999\|Ga0187767_10134405	Not Available	724	Open in IMG/M
3300018062\|Ga0187784_11664402	Not Available	505	Open in IMG/M
3300018085\|Ga0187772_11424567	Not Available	515	Open in IMG/M
3300018086\|Ga0187769_11084281	Not Available	606	Open in IMG/M
3300020581\|Ga0210399_10903811	Not Available	716	Open in IMG/M
3300021388\|Ga0213875_10014373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3863	Open in IMG/M
3300021433\|Ga0210391_11399833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300021433\|Ga0210391_11454397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300021479\|Ga0210410_10338997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300021479\|Ga0210410_11085163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300021560\|Ga0126371_11323768	All Organisms → cellular organisms → Bacteria → Terrabacteria group	853	Open in IMG/M
3300021560\|Ga0126371_11331051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300021560\|Ga0126371_13868051	Not Available	504	Open in IMG/M
3300025898\|Ga0207692_10328874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300025910\|Ga0207684_10388205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1200	Open in IMG/M
3300025928\|Ga0207700_10330864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1322	Open in IMG/M
3300026320\|Ga0209131_1007620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6839	Open in IMG/M
3300026551\|Ga0209648_10758445	Not Available	530	Open in IMG/M
3300027109\|Ga0208603_1017028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300027646\|Ga0209466_1076411	Not Available	676	Open in IMG/M
3300027725\|Ga0209178_1313132	All Organisms → cellular organisms → Bacteria → Terrabacteria group	580	Open in IMG/M
3300027765\|Ga0209073_10291908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	644	Open in IMG/M
3300027855\|Ga0209693_10005967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5583	Open in IMG/M
3300027855\|Ga0209693_10331605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300027884\|Ga0209275_10821763	Not Available	536	Open in IMG/M
3300029915\|Ga0311358_10196309	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300029953\|Ga0311343_10458618	Not Available	1149	Open in IMG/M
3300031259\|Ga0302187_10449362	Not Available	600	Open in IMG/M
3300031544\|Ga0318534_10581003	Not Available	637	Open in IMG/M
3300031561\|Ga0318528_10189237	Not Available	1100	Open in IMG/M
3300031572\|Ga0318515_10290588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	876	Open in IMG/M
3300031680\|Ga0318574_10031853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2673	Open in IMG/M
3300031708\|Ga0310686_116094863	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300031713\|Ga0318496_10207522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1077	Open in IMG/M
3300031713\|Ga0318496_10845037	Not Available	504	Open in IMG/M
3300031723\|Ga0318493_10490382	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300031724\|Ga0318500_10661534	Not Available	531	Open in IMG/M
3300031736\|Ga0318501_10200962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1043	Open in IMG/M
3300031747\|Ga0318502_10059379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2034	Open in IMG/M
3300031747\|Ga0318502_10332145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300031747\|Ga0318502_10381526	All Organisms → cellular organisms → Bacteria → Terrabacteria group	837	Open in IMG/M
3300031747\|Ga0318502_10513998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	718	Open in IMG/M
3300031747\|Ga0318502_10554821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300031748\|Ga0318492_10414346	Not Available	709	Open in IMG/M
3300031751\|Ga0318494_10345120	Not Available	861	Open in IMG/M
3300031765\|Ga0318554_10000253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17510	Open in IMG/M
3300031765\|Ga0318554_10313721	Not Available	892	Open in IMG/M
3300031769\|Ga0318526_10131903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300031771\|Ga0318546_10735112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300031777\|Ga0318543_10519545	Not Available	534	Open in IMG/M
3300031782\|Ga0318552_10015833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3255	Open in IMG/M
3300031782\|Ga0318552_10217405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300031794\|Ga0318503_10187354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora endophytica	670	Open in IMG/M
3300031795\|Ga0318557_10351484	Not Available	677	Open in IMG/M
3300031795\|Ga0318557_10592240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	509	Open in IMG/M
3300031797\|Ga0318550_10019118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2804	Open in IMG/M
3300031797\|Ga0318550_10433072	Not Available	636	Open in IMG/M
3300031798\|Ga0318523_10141914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1193	Open in IMG/M
3300031799\|Ga0318565_10147451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora endophytica	1141	Open in IMG/M
3300031805\|Ga0318497_10489788	Not Available	689	Open in IMG/M
3300031820\|Ga0307473_11246550	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300031823\|Ga0307478_10347644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300031831\|Ga0318564_10297921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora endophytica	712	Open in IMG/M
3300031846\|Ga0318512_10121822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300031846\|Ga0318512_10541005	Not Available	592	Open in IMG/M
3300031860\|Ga0318495_10226853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300031894\|Ga0318522_10234783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300031896\|Ga0318551_10470180	Not Available	719	Open in IMG/M
3300031897\|Ga0318520_10538297	Not Available	723	Open in IMG/M
3300031910\|Ga0306923_11981188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	592	Open in IMG/M
3300031912\|Ga0306921_11031949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300031941\|Ga0310912_10187600	Not Available	1577	Open in IMG/M
3300031946\|Ga0310910_10925991	Not Available	683	Open in IMG/M
3300031954\|Ga0306926_11145953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300031954\|Ga0306926_12057619	Not Available	640	Open in IMG/M
3300031981\|Ga0318531_10528797	Not Available	534	Open in IMG/M
3300032010\|Ga0318569_10366398	Not Available	672	Open in IMG/M
3300032010\|Ga0318569_10583987	Not Available	520	Open in IMG/M
3300032025\|Ga0318507_10094335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300032035\|Ga0310911_10853788	Not Available	526	Open in IMG/M
3300032043\|Ga0318556_10145555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300032044\|Ga0318558_10007539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3962	Open in IMG/M
3300032044\|Ga0318558_10213563	Not Available	944	Open in IMG/M
3300032054\|Ga0318570_10476947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	569	Open in IMG/M
3300032066\|Ga0318514_10330583	Not Available	807	Open in IMG/M
3300032066\|Ga0318514_10617511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300032160\|Ga0311301_10360143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	2265	Open in IMG/M
3300032205\|Ga0307472_100741228	All Organisms → cellular organisms → Bacteria → Terrabacteria group	889	Open in IMG/M
3300032261\|Ga0306920_100399300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2044	Open in IMG/M
3300032770\|Ga0335085_10280462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1986	Open in IMG/M
3300032770\|Ga0335085_10288243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1952	Open in IMG/M
3300032770\|Ga0335085_12507038	Not Available	511	Open in IMG/M
3300032805\|Ga0335078_10654762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300032805\|Ga0335078_12247238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300032828\|Ga0335080_12060204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300032892\|Ga0335081_10649210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1291	Open in IMG/M
3300032892\|Ga0335081_10845406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300032898\|Ga0335072_10999003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300033158\|Ga0335077_10751008	Not Available	999	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.65%
Host-Associated	Host-Associated	1.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.95%
Aquatic	Environmental → Aquatic	2.70%
Plants	Host-Associated → Plants	1.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.92%
Freshwater	Environmental → Aquatic → Freshwater	2.03%
Peat	Environmental → Terrestrial → Peat	2.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Roots	Host-Associated → Plants → Roots	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.03%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.03%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048288

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005407262	3300002245	Forest Soil	VLTTDPDEAGRRAAREARALLGDPSPSFAALFASAHFLDS
JGIcombinedJ51221_100570781	3300003505	Forest Soil	VKAGGALVRTADVGEAARQAVQQAREPLGGLSPSFGVLFASAHFFGSAEALA
Ga0066396_100728472	3300004267	Tropical Forest Soil	VLTADAREAARRAVAEAQASLGGRPPSLAVLFASAHFFGAAE
Ga0066683_103280513	3300005172	Soil	VKAGGALVLTADAREAARQAVGEARASLGDSSPSFAVLFGS
Ga0070713_1015901841	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKAGGALVLTADADQAARLAVGQAGDSLGGEPPAFAVLFASPHF
Ga0070731_108390172	3300005538	Surface Soil	VKAAGALVLTADPREAASQAVREARAALGNVSPSFAVLFASAHFLGSAQALL
Ga0070762_102463141	3300005602	Soil	VKAGGALILTADPGVAATRAVAQATEALGDASASLGVLFASAHFLG
Ga0066905_1009380411	3300005713	Tropical Forest Soil	MKAGGALVLTADPREAASRAAGEARASLGGPSPTFAVLFASAHF
Ga0074059_119821141	3300006578	Soil	MKAGGALVLTADAREAASRAVGEARASLGGLSPTFAVLFASGHFFGAA
Ga0079221_110591771	3300006804	Agricultural Soil	VKAGGALVLTADAGQAARLAVGQATDSLGGQPPAFAVLFASPHFSASAGDL
Ga0073928_105638601	3300006893	Iron-Sulfur Acid Spring	VKAGGALVLGADAETAAGRAVAQAQTSLGDLDPSFAVLFASSHYFGSAETLVAAVAEHTG
Ga0074063_134913901	3300006953	Soil	MKAGGALVLTEDAREAASRAAAEARASLGGLSPTFAVLFASAHFFG
Ga0079219_112791561	3300006954	Agricultural Soil	VLTADAREAARRAVAEARAPLGGLTPSLAVLFASAHFFGSAEISPRR
Ga0099830_105725513	3300009088	Vadose Zone Soil	VLTADAREAASRAVVEARVPLGGVPPSLAVLFASEHFFGSAEDL
Ga0105237_111202532	3300009545	Corn Rhizosphere	MKAGGALVLTADAREAARRAAGEARASLGGLSPTFAVLFASAHFFGSAQDLV
Ga0116224_105902902	3300009683	Peatlands Soil	VKAGGALVLTADPGAAARRAVAQARDALGDTSPSLAVLFASAHF
Ga0126380_102682862	3300010043	Tropical Forest Soil	VLTADAREAARRAVGEARASLGDESPSLAVLFASAHFF
Ga0126382_122342462	3300010047	Tropical Forest Soil	VLTADPAEAGRRVFGEARALLGDMSPSFAVLFASTHFLGSEQ
Ga0126370_101560411	3300010358	Tropical Forest Soil	VKAGGALVLTADAREAARRAVAEARASLGGLSPSLAVLFASAHFFGSA
Ga0126370_113960302	3300010358	Tropical Forest Soil	MKAGGALVLTADAREAASRAAGEARASLGGLSPTFAVLFASAHFFGSAQDLV
Ga0126376_125369101	3300010359	Tropical Forest Soil	VKAGGALVLSADPDEAGRRAASQARASLGELSPSFAVLFASAHFLGSAQALAA
Ga0126377_118211491	3300010362	Tropical Forest Soil	VKAGGALVLAADPGAAARRAVSEARAALGDSSPSFAVLFASE
Ga0126379_105922371	3300010366	Tropical Forest Soil	VKAGGALVLAADPGAAARRAVSEARAALGDSSPSFAVLF
Ga0126383_115322721	3300010398	Tropical Forest Soil	MKAGGALVLTADLREAASRAAGEAQASLGGLSPTFAVLFASAHF
Ga0124844_12325562	3300010868	Tropical Forest Soil	VKAGGALVLTADADEAASLAVAQARAALGDLSPSFAV
Ga0151489_11798491	3300011106	Soil	MQAGGALVLTEDAREAASRAAAEARASLGGLSPTFAVLFASAHFF
Ga0137388_102567622	3300012189	Vadose Zone Soil	VLTADPDEAARRAAGEALALLGGLSPSFAVLFASAHFLRSAEALIA
Ga0137365_108219741	3300012201	Vadose Zone Soil	VKAGGALVLTADAREAARRAVGEARASLGDSSPSFAVLFGSAHFL
Ga0137379_112191351	3300012209	Vadose Zone Soil	VKAGGAVVLTADPFEAASRVVGEAEASLEGLSPSFAVLFASAHFFRSAEALVAA
Ga0137378_105765441	3300012210	Vadose Zone Soil	VKAGGALVLTADAGHAARRAVAEARASLGDLTPSFGVL
Ga0137377_117070751	3300012211	Vadose Zone Soil	MKAGGALVLTADPREAASRAAGEARASLGGLSPTFAVLFASAHFFGSAQDLVTAV
Ga0137372_102490561	3300012350	Vadose Zone Soil	VKAGGALVLAAEPGEAARRAVAEARAPLGGQPPSLA
Ga0164301_102872441	3300012960	Soil	MKAGGALVLTEDAREAASRAAAEARASLGGLSPTFAVLFASAHF
Ga0126369_106357622	3300012971	Tropical Forest Soil	VLTADAGEAARRAVGEARVSLGDTPPSFAVLFASAHFFASA
Ga0126369_110003721	3300012971	Tropical Forest Soil	VKAGGALVLTADAREAASRGVEEARASLGGLAPSFAVLFASAHFFGSARAL
Ga0126369_136562401	3300012971	Tropical Forest Soil	MKAAGALVLTADAREAASRAVGEAQSSLGDLPPSLAVLFAS
Ga0182041_113114171	3300016294	Soil	VKAGGALVLTADPGVAASRAVAQAREALGNTPPELAVLFASAHFLG
Ga0182033_111352981	3300016319	Soil	VLAADAEEAGRRAAGEARASLGDRSPSFAVLFASAHFLGRAE
Ga0182035_103517651	3300016341	Soil	VLTADAREAARRAVAEARAPLGGLAPSLAVLFASAHF
Ga0182034_109956051	3300016371	Soil	VLTADAREAARRAVAEARAPLGGLAPSLAVLFASAHFFGSAEDL
Ga0182040_107659901	3300016387	Soil	VLTADPDAAASRAVGAARAALGDLSPSLAVLFASDHFL
Ga0182037_116055101	3300016404	Soil	VLTADARDAAKRAVSEARAPLAGLSPSLAVLFASAHFFDSAE
Ga0182039_120443692	3300016422	Soil	VKAGGALVLTADPGVAASRAVAQAREALGNTPPELAVLFASAHFLGSA
Ga0187802_103697012	3300017822	Freshwater Sediment	MKAGGALVLTADPGVAATRAVAQAREALGDAPASLAVLF
Ga0187819_107430491	3300017943	Freshwater Sediment	VKAGGALVLTADPGVAATRAVAQAREALGDAPASLAVL
Ga0187847_105918441	3300017948	Peatland	VKAGGALVLTADPGVAATRAVAQARSALGDQPPSLAVLFASAHFLAVAQDLV
Ga0187779_110706521	3300017959	Tropical Peatland	VLVRAGGALILTADPGAAARQAVEEARASLGGMPPSLAVLFASAHFFGSAE
Ga0187767_101344051	3300017999	Tropical Peatland	VKAGGALVLTADPGEAASRAVAQACEALGDVPPSLAVLF
Ga0187784_116644021	3300018062	Tropical Peatland	VKAAGALALTADPGAAASRVVGEARQALGDLPPSLAVLFASAHFLGSAE
Ga0187772_114245671	3300018085	Tropical Peatland	MKAGGALVLTADPGAAASRAVGQAREALGDLPPSLAVLFASAHFLGSAEALLTA
Ga0187769_110842811	3300018086	Tropical Peatland	MKAGGALVLTADPGAAASRAVGQAREALGDLPPSLAVL
Ga0210399_109038112	3300020581	Soil	VLTADAGEAARRAVGEARVSLGDTPPSFAVLFASAHFYASAEALVAAVAEE
Ga0213875_100143731	3300021388	Plant Roots	VKAGGALVTVADAGEAARRAVGGAREALDGQPPGFGVLFASPHFSGSAR
Ga0210391_113998331	3300021433	Soil	VLTADAGEAARQAVTEARAALGEASPEFAVLFASSHFLGSATTLLTA
Ga0210391_114543972	3300021433	Soil	VKAGGALVLGADAETAAGRAVAQAQASLGDVDPAFAV
Ga0210410_103389973	3300021479	Soil	VKAGGALVLTADPGEAATRAVAQATEALGDAPPSLAVLFASAHFLGSAEA
Ga0210410_110851631	3300021479	Soil	VKAGGALVLTADPGQAATRAVAQATEALEDASPSLAVLFAS
Ga0126371_113237682	3300021560	Tropical Forest Soil	MKAGGALVLTADPHEAASRAAGEALASLGGLSPTFAVLFASAHFFGSAQD
Ga0126371_113310512	3300021560	Tropical Forest Soil	MKAGGALVLTADAREAASRAAGEARASLGGLSPTFAVLFA
Ga0126371_138680511	3300021560	Tropical Forest Soil	VKAGGALVLTADAREAASRGVEEARASLGGLSPSFAVLFASAHFF
Ga0207692_103288742	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKAGGALVLTADAGQAARLAVGQAGDSLDGEPPAFAVLFASPHFSA
Ga0207684_103882051	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLTADPAEAGRRAVGEAQALMGGLSPSFAVMFASAHSLGSAE
Ga0207700_103308641	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VKAGGALVLTADADQAARLAVGQAGDSLGGEPPAFAV
Ga0209131_10076201	3300026320	Grasslands Soil	VLIADPAEAGRRVVGEARALLGGLSPSFAVMFASAHFLGSAEALA
Ga0209648_107584451	3300026551	Grasslands Soil	VLPADPDEAGRRAARQARALLGGLSPSFAVLFASAHFLGSAEALVAAVA
Ga0208603_10170281	3300027109	Forest Soil	VKAGGALVLTADPGEAATRAVAQATEALGDASPSLAVLFASAHFLG
Ga0209466_10764112	3300027646	Tropical Forest Soil	VLSADPDEAGRRAAGQARASLGDLAPSFAVLFASAHFLDSAQALAA
Ga0209178_13131321	3300027725	Agricultural Soil	MKAGGALVLTEDAREAASRAAGEARASLGGLPPTFAVL
Ga0209073_102919082	3300027765	Agricultural Soil	VKAGGALVLTADAETAARRAVREARASLGTLPESFAVLFASAHFSGSAPALV
Ga0209693_100059678	3300027855	Soil	VLTAEAGEAASEAVIEARAALGEASPEFAVLFASAHFLG
Ga0209693_103316051	3300027855	Soil	VLAADPDEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRA
Ga0209275_108217632	3300027884	Soil	VLAADPEAAARRAVGEARASLGDAPPSFAVLFASEHFFGSAQAL
Ga0311358_101963091	3300029915	Bog	VKAGAALVLTADPAEAGRRAAGLARTSLGDSPPAFGVLFASAHFHDSAEALLA
Ga0311343_104586182	3300029953	Bog	VKAGAALVLTADPAEAGRRAAGMARVSLGDSPPAFGVLFASAHFHDSAE
Ga0302187_104493621	3300031259	Bog	VKAGAALVLTADPAEAGRRAAGLARTSLGDSPPAFGVLFASAHFHDS
Ga0318534_105810032	3300031544	Soil	VLAADAEEAGRRAAGEARASLGDRSPSFAVLFASAHFLGRAEDLLAAQK
Ga0318528_101892372	3300031561	Soil	VLAADPVAAARRAVSEARAALGGSSPSFAVLFASEHFFGDAEA
Ga0318515_102905881	3300031572	Soil	MKAGGALVLTADAREAARRAAGEARASLGGLSPAFAVLF
Ga0318574_100318535	3300031680	Soil	VKAAGALVLTADPGEAASRAVGEARASLGGLPPSFAVLFASAHFFGSAE
Ga0310686_1160948631	3300031708	Soil	VKAGGALVLTADPEMAASRAVAEARSALGDVPPSLAVLFASAH
Ga0318496_102075222	3300031713	Soil	VKAGGALVLTADPGEAASRAVAQARSVLGDQPPSLAVLFASAHFLGSAEALV
Ga0318496_108450371	3300031713	Soil	VLTADAREAARRAVAEARVPLGGQAPSLAVLFASAHFFSSAEDL
Ga0318493_104903821	3300031723	Soil	VKAGGALVLTADPGTAATRAVAQASEALGDLPPSLAVLFASAHFLGSAEALV
Ga0318500_106615342	3300031724	Soil	VKAAGALVLTADPGEAASRAVREARAPLGELSPSFAV
Ga0318501_102009621	3300031736	Soil	VKAGGALVLTADPGEAASRAVAQARSVLGDQPPSLAVLFASAHFLG
Ga0318502_100593793	3300031747	Soil	VLTADPDAAASRAVGAARAALGDLSPSLAVLFASDHFLGSAEALV
Ga0318502_103321451	3300031747	Soil	VLVADPEEAGRRATEQARASLGDRPPSFAVLFASAHFLGQAETLVTAV
Ga0318502_103815261	3300031747	Soil	MKAGGALVLTADAREAARRAAREARASLGGLSPAFAVLF
Ga0318502_105139982	3300031747	Soil	VKAGGALVLTADPGEAASRAVAQARSALGDQPPSLAVLFASAHFLGSAEALVA
Ga0318502_105548213	3300031747	Soil	VKAGGALVLTADPGTAATRAVAQASEALGDLPPTLA
Ga0318492_104143462	3300031748	Soil	VKAGGALVLTADPGEAASRAVAQASEALGDAPPSLAVL
Ga0318494_103451201	3300031751	Soil	VKAGGALVLTADPGEAASRAVAQASEALGDAPPSLAVLFASAHF
Ga0318554_100002531	3300031765	Soil	VLAADPAEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRAEALVAAV
Ga0318554_103137212	3300031765	Soil	MKAGGALVLTADPGAAAARAVAQATEALGDTPPSLAV
Ga0318526_101319034	3300031769	Soil	VLAADPAEAGRRAAGEARASLGDRPPSFAVLFASAHFIG
Ga0318546_107351121	3300031771	Soil	MKAAGALVLNADPGAAARRAVAQARDALGDASPSLAVLFA
Ga0318543_105195452	3300031777	Soil	VLTADARDAARRAVAEARAPLGGLAPSLAVLFASAHFFGSAE
Ga0318566_100483481	3300031779	Soil	VLTADPDAAASRAVGAARAALGDLPPSLAVLFASDHFLGSAEALV
Ga0318552_100158333	3300031782	Soil	VLTADARDAARRAVAEARAPLGGLAPSLAVLFASAHFF
Ga0318552_102174054	3300031782	Soil	VLAADPEEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRA
Ga0318548_103668492	3300031793	Soil	VLTADPDAAASRAVGAARAALGDLPPSLAVLFASDHFLGSAEA
Ga0318503_101873541	3300031794	Soil	VLAADPAEAGRRAAGEARASLGDRPPSFAVLFASAHFL
Ga0318557_103514842	3300031795	Soil	VLAADPEEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRAEALVAAV
Ga0318557_105922402	3300031795	Soil	VKAGGALVLTADPGEAASRAVAQARSALGDQPPSLAVLFASAEPRK
Ga0318550_100191186	3300031797	Soil	VKAAGALVLTADPGEAASRAVREARAPLGELSPSFAVLFASAHFFGSAQA
Ga0318550_104330722	3300031797	Soil	VLVADPEEAGRRATEQARASLGDRPPSFAVLFASAHFLGQAET
Ga0318523_101419143	3300031798	Soil	MKASGALVLTADPGAAARRAVAQARDALGDALPSLAVLFASAHYLDSA
Ga0318565_101474514	3300031799	Soil	VLAADAEEAGRRAAGEARASLGDRSPSFAVLFASAHFLGRAETLVAAVAR
Ga0318497_104897881	3300031805	Soil	VLAADPVEAGRRAAGEARASLGDQSPSFAVLFASAHFLGRAEN
Ga0307473_112465502	3300031820	Hardwood Forest Soil	MKAGGALVLTADAREAARRAAGEARASLGGLSPTFA
Ga0307478_103476441	3300031823	Hardwood Forest Soil	VKAGGALVLTADPGEAATRAVAQATEALGDAPPSLAVLFAS
Ga0318564_102979213	3300031831	Soil	VLVADPEEAGRRATEQARASLGDRPPSFAVLFASAHFLGQA
Ga0318512_101218222	3300031846	Soil	VKAGGALVLTADPGEAASRAVAQARSALGDQPPSLAVLF
Ga0318512_105410051	3300031846	Soil	VKAGGALVLTADPGAAARRAVEEARAALGDLPPSLAVLFASAHFLGSAE
Ga0318495_102268533	3300031860	Soil	VLAADPAEAGRRAAGEARASLGDRPPSFAVLFASA
Ga0318522_102347832	3300031894	Soil	VKAGGALVLTADPGVAASRAVAQAREALGNTPPSLAVLFASAHFLGSA
Ga0318551_104701802	3300031896	Soil	VKAGGALVLTADPGAAARRAVEEARAALGDLPPTLAVLFASA
Ga0318520_105382971	3300031897	Soil	VKAGGALVLTADPGAAARRAVEEARAALGDLPPSLAVLFASA
Ga0306923_119811882	3300031910	Soil	VKAGGALVLTADPGEAASRAVAQARSVLGDQPPSLAVLFASAHFLGSAEAL
Ga0306921_110319491	3300031912	Soil	VKAGGALVLTADPGVAASRAVAQAREALGNTPPSLAVLFASAHF
Ga0310912_101876001	3300031941	Soil	VLTADAREAARRAVDEARASLGGLPPALAVLFASAHFFDSAEDLAVAV
Ga0310910_109259911	3300031946	Soil	VLTADAREAARRAVAEARVPLGGQAPSLAVLFASAHFFSS
Ga0306926_111459531	3300031954	Soil	VLAADPEEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRAEALV
Ga0306926_120576191	3300031954	Soil	VKAAGALVLTADPGEAASRAVGEARASLGGLPPSFAVLFASAHF
Ga0318531_105287972	3300031981	Soil	VLTADAREAARRAVAEARVPLGGQAPSLAVLFASAHFFSSAE
Ga0318569_103663982	3300032010	Soil	VLAADPEEAGRRAAGEARASLGDRPPSFAVLFASAHFLGRAEALVAAVAR
Ga0318569_105839872	3300032010	Soil	VLTADAGEAARRAVREARVSLGNLPPSFAVLFASAHFFASAEALVAAV
Ga0318507_100943354	3300032025	Soil	VLAADPAEAGRRAAGEARASLGDRPPSFAVLFASAHFLG
Ga0310911_108537882	3300032035	Soil	VKAAGALVLTADPGEAASRAVGEARASLGGLPPSF
Ga0318556_101455551	3300032043	Soil	VKAGGALVLTSDPGAAAARAVAQASEALGDLPPSLAVLFASAHF
Ga0318558_100075391	3300032044	Soil	VLTADARDAARRAVAEARAPLGGLAPSLAVLFASAHFFGSAEDLAAEPKK
Ga0318558_102135631	3300032044	Soil	VLTADAREAARRAVAEARAPLGGLAPSLAVLFASAHFFDSARS
Ga0318570_104769472	3300032054	Soil	VKAGGALVLTADPGVAASRAVAQAREALGNTPPSLAVLFASAHFLGSAEAL
Ga0318514_103305832	3300032066	Soil	VKAGGALVLTADPGEAASRAVAQASEALGDAPPSLAVLF
Ga0318514_106175112	3300032066	Soil	VLAADPGGAARRAVSEARAALGDSPPSFAVLFASDHFFGTAEALA
Ga0311301_103601431	3300032160	Peatlands Soil	VKAGGALVLAADTETAASRAVAQARASLGDLDPSF
Ga0307472_1007412281	3300032205	Hardwood Forest Soil	MKAGGALVLIADAREAARRPAGEARASLGGLSPTFAVLA
Ga0306920_1003993004	3300032261	Soil	VKAAGALVLTADPGEAASRAVGEARASLGGLPPSFAVLFAS
Ga0335085_102804621	3300032770	Soil	VKAAGALVLTADPGEAAGRAVAQARALLGDVSPSFAVLFASTHFFGSAQAL
Ga0335085_102882431	3300032770	Soil	MKAAGALVLTADAREAASRAVGEARSSLGDLPPSLAVLFASGHFFGAAQDL
Ga0335085_125070382	3300032770	Soil	VKAAGALVLTTDAGEAASRAVAKARASLGDMPPSVAVLFAS
Ga0335078_106547621	3300032805	Soil	MKAGGALVLTADAREAARRAAGEARASLGGVSPTFAVLFASAHFFGSA
Ga0335078_122472382	3300032805	Soil	VKAGGALVLTADADTAARQAVQAARASLGAWPESFAVLFASTHFSGSAPALVE
Ga0335080_120602042	3300032828	Soil	VKAAGALVLTTDAREAAGRAVADARASLGDVPPSFAVLFASAHFLGSAQ
Ga0335081_106492103	3300032892	Soil	VKAGGALVLTADADTAARQAVQAARASLGAWPESFAVLFASTHFSGS
Ga0335081_108454063	3300032892	Soil	VLAADAEEAGRRAAEEALASLGDQPPSFAVMFASAHFLDLADTLVASV
Ga0335072_109990031	3300032898	Soil	VLTADADDAASRAVAGAWASLGTASPDFAVLFASAHFLGSATALL
Ga0335077_107510081	3300033158	Soil	MKAAGALVHTADAREAATRAAGQARELLGDLPASFAVLFASAHFF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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